Nucleic acids encoding DP-178 and other viral fusion inhibitor peptides useful for treating aids

ABSTRACT

The present invention relates to peptides which exhibit potent anti-retroviral activity. The peptides of the invention comprise DP178 (SEQ ID:1) peptide corresponding to amino acids 638 to 673 of the HIV-1 LAI  gp41 protein, and fragments, analogs and homologs of DP178. The invention further relates to the uses of such peptides as inhibitory of human and non-human retroviral, especially HIV, transmission to uninfected cells.

This is a continuation of U.S. application Ser. No. 08/484,223 filedJun. 7, 1995, which is a division of U.S. application Ser. No.08/470,896 filed Jun. 6, 1995, now U.S. Pat. No. 6,479,055 issued Nov.12, 2002, which is a continuation-in-part of U.S. application Ser. No.08/360,107 filed Dec. 20, 1994, now U.S. Pat. No. 6,017,536 issued Jan.25, 2000, which is a continuation-in-part of U.S. application Ser. No.08/255,208 filed Jun. 7, 1994, now U.S. Pat. No. 6,440,656 issued Aug.27, 2002, which is a continuation-in-part of U.S. application Ser. No.08/073,028 filed Jun. 7, 1993, now U.S. Pat. No. 5,464,933 issued Nov.7, 1995, each of which is incorporated herein by reference in itsentirety.

This invention was made with Government support under Grant No.AI-30411-02 awarded by the National Institutes of Health. The Governmenthas certain rights in the invention.

On Jun. 13, 2005, a Second Substitute Sequence Listing on two compactdiscs labeled “Copy 1” and “Copy 2” was submitted pursuant to 37 C.F.R.§§ 1.52(e) and 1.821(c). The compact discs and their contents areincorporated by reference herein in their entireties and are describedas follows:

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1. INTRODUCTION

The present invention relates, first, to DP178 (SEQ ID NO:1), a peptidecorresponding to amino acids 638 to 673 of the HIV-1_(LAI) transmembraneprotein (TM) gp41, and portions or analogs of DP178 (SEQ ID NO:1), whichexhibit anti-membrane fusion capability, antiviral activity, such as theability to inhibit HIV transmission to uninfected CD-4⁺ cells, or anability to modulate intracellular processes involving coiled-coilpeptide structures. Further, the invention relates to the use of DP178(SEQ ID NO:1) and DP178 portions and/or analogs as antifusogenic orantiviral compounds or as inhibitors of intracellular events involvingcoiled-coil peptide structures. The present invention also relates topeptides analogous to DP107 (SEQ ID NO: 89), a peptide corresponding toamino acids 558 to 595 of the HIV-1_(LAI) transmembrane protein (TM)gp41, having amino acid sequences present in other viruses, such asenveloped viruses, and/or other organisms, and further relates to theuses of such peptides. These peptides exhibit anti-membrane fusioncapability, antiviral activity, or the ability to modulate intracellularprocesses involving coiled-coil peptide structures. The presentinvention additionally relates to methods for identifying compounds thatdisrupt the interaction between DP178 and DP107, and/or betweenDP107-like and DP178-like peptides. Further, the invention relates tothe use of the peptides of the invention as diagnostic agents. Forexample, a DP178 peptide may be used as an HIV subtype-specificdiagnostic. The invention is demonstrated, first, by way of an Examplewherein DP178 (SEQ ID:1), and a peptide whose sequence is homologous toDP178 are each shown to be potent, non-cytotoxic inhibitors of HIV-1transfer to uninfected CD-4⁺ cells. The invention is furtherdemonstrated by Examples wherein peptides having structural and/or aminoacid motif similarity to DP107 and DP178 are identified in a variety ofviral and nonviral organisms, and in examples wherein a number of suchidentified peptides derived from several different viral systems aredemonstrated to exhibit antiviral activity.

2. BACKGROUND OF THE INVENTION 2.1. Membrane Fusion Events

Membrane fusion is a ubiquitous cell biological process (for a review,see White, J. M., 1992, Science 258:917-924). Fusion events whichmediate cellular housekeeping functions, such as endocytosis,constitutive secretion, and recycling of membrane components, occurcontinuously in all eukaryotic cells.

Additional fusion events occur in specialized cells. Intracellularly,for example, fusion events are involved in such processes as occur inregulated exocytosis of hormones, enzymes and neurotransmitters.Intercellularly, such fusion events feature prominently in, for example,sperm-egg fusion and myoblast fusion.

Fusion events are also associated with disease states. For example,fusion events are involved in the formation of giant cells duringinflammatory reactions, the entry of all enveloped viruses into cells,and, in the case of human immunodeficiency virus (HIV), for example, areresponsible for the virally induced cell-cell fusion which leads to celldeath.

2.2. The Human Immunodeficiency Virus

The human immunodeficiency virus (HIV) has been implicated as theprimary cause of the slowly degenerative immune system disease termedacquired immune deficiency syndrome (AIDS) (Barre-Sinoussi, F. et al.,1983, Science 220:868-870; Gallo, R. et al., 1984, Science 224:500-503).There are at least two distinct types of HIV: HIV-1 (Barre-Sinoussi, F.et al., 1983, Science 220:868-870; Gallo R. et al., 1984, Science224:500-503) and HIV-2 (Clavel, F. et al., 1986, Science 233:343-346;Guyader, M. et al., 1987, Nature 326:662-669). Further, a large amountof genetic heterogeneity exists within populations of each of thesetypes. Infection of human CD-4⁺ T-lymphocytes with an HIV virus leads todepletion of the cell type and eventually to opportunistic infections,neurological dysfunctions, neoplastic growth, and ultimately death.

HIV is a member of the lentivirus family of retroviruses (Teich, N. etal., 1984, RNA Tumor Viruses, Weiss, R. et al., eds., CSH-Press, pp.949-956). Retroviruses are small enveloped viruses that contain adiploid, single-stranded RNA genome, and replicate via a DNAintermediate produced by a virally-encoded reverse transcriptase, anRNA-dependent DNA polymerase (Varmus, H., 1988, Science 240:1427-1439).Other retroviruses include, for example, oncogenic viruses such as humanT-cell leukemia viruses (HTLV-I,-II,-III), and feline leukemia virus.

The HIV viral particle consists of a viral core, composed of capsidproteins, that contains the viral RNA genome and those enzymes requiredfor early replicative events. Myristylated Gag protein forms an outerviral shell around the viral core, which is, in turn, surrounded by alipid membrane enveloped derived from the infected cell membrane. TheHIV enveloped surface glycoproteins are synthesized as a single 160 Kdprecursor protein which is cleaved by a cellular protease during viralbudding into two glycoproteins, gp41 and gp120. gp41 is a transmembraneprotein and gp120 is an extracellular protein which remainsnon-covalently associated with gp41, possibly in a trimeric ormultimeric form (Hammarskjold, M. and Rekosh, D., 1989, Biochem.Biophys. Acta 989:269-280).

HIV is targeted to CD-4⁺ cells because the CD-4 cell surface proteinacts as the cellular receptor for the HIV-1 virus (Dalgleish, A. et al.,1984, Nature 312:763-767; Klatzmann et al. 1984, Nature 312:767-768;Maddon et al. 1986, Cell 47:333-348). Viral entry into cells isdependent upon gp120 binding the cellular CD-4+ receptor molecules(McDougal, J. S. et al., 1986, Science 231:382-385; Maddon, P. J. etal., 1986, Cell 47:333-348) and thus explains HIV's tropism for CD-4+cells, while gp41 anchors the enveloped glycoprotein complex in theviral membrane.

2.3. HIV Treatment

HIV infection is pandemic and HIV associated diseases represent a majorworld health problem. Although considerable effort is being put into thesuccessful design of effective therapeutics, currently no curativeanti-retroviral drugs against AIDS exist. In attempts to develop suchdrugs, several stages of the HIV life cycle have been considered astargets for therapeutic intervention (Mitsuya, H. et al., 1991, FASEB J.5:2369-2381). For example, virally encoded reverse transcriptase hasbeen one focus of drug development. A number ofreverse-transcriptase-targeted drugs, including 2′,3′-dideoxynucleosideanalogs such as AZT, ddI, ddC, and d4T have been developed which havebeen shown to been active against HIV (Mitsuya, H. et al., 1991, Science249:1533-1544). While beneficial, these nucleoside analogs are notcurative, probably due to the rapid appearance of drug resistant HIVmutants (Lander, B. et al., 1989, Science 243:1731-1734). In addition,the drugs often exhibit toxic side effects such as bone marrowsuppression, vomiting, and liver function abnormalities.

Attempts are also being made to develop drugs which can inhibit viralentry into the cell, the earliest stage of HIV infection. Here, thefocus has thus far been on CD4, the cell surface receptor for HIV.Recombinant soluble CD4, for example, has been shown to inhibitinfection of CD-4+T-cells by some HIV-1 strains (Smith, D. H. et al.,1987, Science 238:1704-1707). Certain primary HIV-1 isolates, however,are relatively less sensitive to inhibition by recombinant CD-4 (Daar,E. et al., 1990, Proc. Natl. Acad. Sci. USA 87:6574-6579). In addition,recombinant soluble CD-4 clinical trials have produced inconclusiveresults (Schooley, R. et al., 1990, Ann. Int. Med. 112:247-253; Kahn, J.O. et al., 1990, Ann. Int. Med. 112:254-261; Yarchoan, R. et al., 1989,Proc. Vth Int. Conf. on AIDS, p. 564, MCP 137).

The late stages of HIV replication, which involve crucial virus-specificsecondary processing of certain viral proteins, have also been suggestedas possible anti-HIV drug targets. Late stage processing is dependent onthe activity of a viral protease, and drugs are being developed whichinhibit this protease (Erickson, J., 1990, Science 249:527-533). Theclinical outcome of these candidate drugs is still in question.

Attention is also being given to the development of vaccines for thetreatment of HIV infection. The HIV-1 enveloped proteins (gp160, gp120,gp41) have been shown to be the major antigens for anti-HIV antibodiespresent in AIDS patients (Barin, et al., 1985, Science 228:1094-1096).Thus far, therefore, these proteins seem to be the most promisingcandidates to act as antigens for anti-HIV vaccine development. To thisend, several groups have begun to use various portions of gp160, gp120,and/or gp41 as immunogenic targets for the host immune system. See forexample, Ivanoff, L. et al., U.S. Pat. No. 5,141,867; Saith, G. et al.,WO 92/22,654; Shafferman, A., WO 91/09,872; Formoso, C. et al., WO90/07,119. Clinical results concerning these candidate vaccines,however, still remain far in the future.

Thus, although a great deal of effort is being directed to the designand testing of anti-retroviral drugs, a truly effective, non-toxictreatment is still needed.

3. SUMMARY OF THE INVENTION

The present invention relates, first, to DP178 (SEQ ID: 1), a 36-aminoacid synthetic peptide corresponding to amino acids 638 to 673 of thetransmembrane protein (TM) gp41 from the HIV-1 isolate LAI (HIV-1 LAI),which exhibits potent anti-HIV-1 activity. As evidenced by the Examplepresented below, in Section 6, the DP178 (SEQ ID:1) antiviral activityis so high that, on a weight basis, no other known anti-HIV agent iseffective at concentrations as low as those at which DP178 (SEQ ID: 1)exhibits its inhibitory effects.

The invention further relates to those portions and analogs of DP178which also show such antiviral activity, and/or show anti-membranefusion capability, or an ability to modulate intracellular processesinvolving coiled-coil peptide structures. The term “DP178 analog” refersto a peptide which contains an amino acid sequence corresponding to theDP178 peptide sequence present within the gp41 protein of HIV-1_(LAI),but found in viruses and/or organisms other than HIV-1_(LAI). Such DP178analog peptides may, therefore, correspond to DP178-like amino acidsequences present in other viruses, such as, for example, envelopedviruses, such as retroviruses other than HIV-1_(LAI), as well asnon-enveloped viruses. Further, such analogous DP178 peptides may alsocorrespond to DP178-like amino acid sequences present in nonviralorganisms.

The invention further relates to peptides DP107 (SEQ ID NO: 89) analogs.DP107 is a peptide corresponding to amino acids 558-595 of theHIV-1_(LAI) transmembrane protein (TM) gp41. The term “DP107 analog” asused herein refers to a peptide which contains an amino acid sequencecorresponding to the DP107 peptide sequence present within the gp41protein of HIV-1 LAI, but found in viruses and organisms other thanHIV-1_(LAI). Such DP107 analog peptides may, therefore, correspond toDP107-like amino acid sequences present in other viruses, such as, forexample, enveloped viruses, such as retroviruses other than HIV-1_(LAI),as well as non-enveloped viruses. Further, such DP107 analog peptidesmay also correspond to DP107-like amino acid sequences present innonviral organisms.

Further, the peptides of the invention include DP107 analog and DP178analog peptides having amino acid sequences recognized or identified bythe 107×178×4, ALLMOTI5 and/or PLZIP search motifs described herein.

The peptides of the invention may, for example, exhibit antifusogenicactivity, antiviral activity, and/or may have the ability to modulateintracellular processes which involve coiled-coil peptide structures.With respect to the antiviral activity of the peptides of the invention,such an antiviral activity includes, but is not limited to theinhibition of HIV transmission to uninfected CD-4⁺ cells. Additionally,the antifusogenic capability, antiviral activity or intracellularmodulatory activity of the peptides of the invention merely requires thepresence of the peptides of the invention, and, specifically, does notrequire the stimulation of a host immune response directed against suchpeptides.

The peptides of the invention may be used, for example, as inhibitors ofmembrane fusion-associated events, such as, for example, the inhibitionof human and non-human retroviral, especially HIV, transmission touninfected cells. It is further contemplated that the peptides of theinvention may be used as modulators of intracellular events involvingcoiled-coil peptide structures.

The peptides of the invention may, alternatively, be used to identifycompounds which may themselves exhibit antifusogenic, antiviral, orintracellular modulatory activity. Additional uses include, for example,the use of the peptides of the invention as organism or viral typeand/or subtype-specific diagnostic tools.

The terms “antifusogenic” and “anti-membrane fusion”, as used herein,refer to an agent's ability to inhibit or reduce the level of membranefusion events between two or more moieties relative to the level ofmembrane fusion which occurs between said moieties in the absence of thepeptide. The moieties may be, for example, cell membranes or viralstructures, such as viral envelopes or pili. The term “antiviral”, asused herein, refers to the compound's ability to inhibit viral infectionof cells, via, for example, cell-cell fusion or free virus infection.Such infection may involve membrane fusion, as occurs in the case ofenveloped viruses, or some other fusion event involving a viralstructure and a cellular structure (e.g., such as the fusion of a viralpilus and bacterial membrane during bacterial conjugation). It is alsocontemplated that the peptides of the invention may exhibit the abilityto modulate intracellular events involving coiled-coil peptidestructures. “Modulate”, as used herein, refers to a stimulatory orinhibitory effect on the intracellular process of interest relative tothe level or activity of such a process in the absence of a peptide ofthe invention.

Embodiments of the invention are demonstrated below wherein an extremelylow concentration of DP178 (SEQ ID: 1), and very low concentrations of aDP178 homolog (SEQ ID:3) are shown to be potent inhibitors of HIV-1mediated CD-4⁺ cell-cell fusion (i.e., syncytial formation) andinfection of CD-4⁺ cells by cell-free virus. Further, it is shown thatDP178 (SEQ ID:1) is not toxic to cells, even at concentrations 3 logshigher than the inhibitory DP-178 (SEQ ID:1) concentration.

The present invention is based, in part, on the surprising discoverythat the DP107 and DP178 domains of the HIV gp41 protein non-covalentlycomplex with each other, and that their interaction is required for thenormal infectivity of the virus. This discovery is described in theExample presented, below, in Section 8. The invention, therefore,further relates to methods for identifying antifusogenic, includingantiviral, compounds that disrupt the interaction between DP107 andDP178, and/or between DP107-like and DP178-like peptides.

Additional embodiments of the invention (specifically, the Examplespresents in Sections 9-16 and 19-25, below) are demonstrated, below,wherein peptides, from a variety of viral and nonviral sources, havingstructural and/or amino acid motif similarity to DP107 and DP178 areidentified, and search motifs for their identification are described.Further, Examples (in Sections 17, 18, 25-29) are presented wherein anumber of the peptides of the invention are demonstrated exhibitsubstantial antiviral activity or activity predictive of antiviralactivity.

3.1. Definitions

Peptides are defined herein as organic compounds comprising two or moreamino acids covalently joined by peptide bonds. Peptides may be referredto with respect to the number of constituent amino acids, i.e., adipeptide contains two amino acid residues, a tripeptide contains three,etc. Peptides containing ten or fewer amino acids may be referred to asoligopeptides, while those with more than ten amino acid residues arepolypeptides. Such peptides may also include any of the modificationsand additional amino and carboxy groups as are described herein.

Peptide sequences defined herein are represented by one-letter symbolsfor amino acid residues as follows:

A (alanine)

R (arginine)

N (asparagine)

D (aspartic acid)

C (cysteine)

Q (glutamine)

E (glutamic acid)

G (glycine)

H (histidine)

I (isoleucine)

L (leucine)

K (lysine)

M (methionine)

F (phenylalanine)

P (proline)

S (serine)

T (threonine)

W (tryptophan)

Y (tyrosine)

V (valine)

4. BRIEF DESCRIPTION OF THE FIGURES

FIG. 1. Amino acid sequence of DP178 (SEQ ID: 1) derived from HIV_(LAI);DP178 homologs derived from HIV-1_(SF2) (DP-185; SEQ ID:3), HIV-1_(RF)(SEQ ID:4), and HIV-1_(MN) (SEQ ID:5); DP178 homologs derived from aminoacid sequences of two prototypic HIV-2 isolates, namely, HIV-2_(rod)(SEQ ID:6) and HIV-2_(NIHZ) (SEQ ID:7); control peptides: DP-180 (SEQID:2), a peptide incorporating the amino acid residues of DP178 in ascrambled sequence; DP-118 (SEQ ID:10) unrelated to DP178, whichinhibits HIV-1 cell free virus infection; DP-125 (SEQ ID:8), unrelatedto DP178, also inhibits HIV-1 cell free virus infection; DP-116 (SEQID:9), unrelated to DP178, is negative for inhibition of HIV-1 infectionwhen tested using a cell-free virus infection assay. Throughout thefigures, the one letter amino acid code is used.

FIG. 2. Inhibition of HIV-1 cell-free virus infection by syntheticpeptides. IC₅₀ refers to the concentration of peptide that inhibits RTproduction from infected cells by 50% compared to the untreated control.Control: the level of RT produced by untreated cell cultures infectedwith the same level of virus as treated cultures.

FIG. 3. Inhibition of HIV-1 and HIV-2 cell-free virus infection by thesynthetic peptide DP178 (SEQ ID:1). IC₅₀: concentration of peptide thatinhibits RT production by 50% compared to the untreated control.Control: Level of RT produced by untreated cell cultures infected withthe same level of virus as treated cultures.

FIGS. 4A-4B. Fusion Inhibition Assays. FIG. 4A: DP178 (SEQ ID:1)inhibition of HIV-1 prototypic isolate-mediated syncytial formation;data represents the number of virus-induced syncytial per cell. FIG. 4B:DP-180 (SEQ ID:2) represents a scrambled control peptide; DP-185 (SEQID:3) represents a DP178 homolog derived from HIV-1_(SF2) isolate;Control, refers to the number of syncytial produced in the absence ofpeptide.

FIG. 5. Fusion inhibition assay: HIV-1 vs. HIV-2. Data represents thenumber of virus-induced syncytial per well. ND: not done.

FIG. 6. Cytotoxicity study of DP178 (SEQ ID:1) and DP-116 (SEQ ID:9) onCEM cells. Cell proliferation data is shown.

FIG. 7. Schematic representation of HIV-gp41 and maltose binding protein(MBP)-gp41 fusion proteins. DP107 and DP178 are synthetic peptides basedon the two putative helices of gp41. The letter P in the DP107 boxesdenotes an Ile to Pro mutation at amino acid number 578. Amino acidresidues are numbered according to Meyers et al., “Human Retrovirusesand AIDS”, 1991, Theoret. Biol. and Biophys. Group, Los Alamos Natl.Lab., Los Alamos, N. Mex. The proteins are more fully described, below,in Section 8.1.1.

FIG. 8. A point mutation alters the conformation and anti-HIV activityof M41.

FIG. 9. Abrogation of DP178 anti-HIV activity. Cell fusion assays werecarried out in the presence of 10 nM DP178 and various concentrations ofM41Δ178 or M41PΔ178.

FIG. 10. Binding of DP178 to leucine zipper of gp41 analyzed by FAb-DELISA.

FIGS. 11A-B. Models for a structural transition in the HIV-1 TM protein.Two models are proposed which indicate a structural transition from anative oligomer to a fusogenic state following a trigger event (possiblygp120 binding to CD4). Common features of both models include (1) thenative state is held together by noncovalent protein-proteininteractions to form the heterodimer of gp120/41 and other interactions,principally though gp41 interactive sites, to form homo-oligomers on thevirus surface of the gp120/41 complexes; (2) shielding of thehydrophobic fusogenic peptide at the N-terminus (F) in the native state;and (3) the leucine zipper domain (DP107) exists as a homo-oligomercoiled coil only in the fusogenic state. The major differences in thetwo models include the structural state (native or fusogenic) in whichthe DP107 and DP178 domains are complexed to each other. In the firstmodel (FIG. 11A) this interaction occurs in the native state and in thesecond (FIG. 11B), it occurs during the fusogenic state. When triggered,the fusion complex in the model depicted in (A) is generated throughformation of coiled-coil interactions in homologous DP107 domainsresulting in an extended α-helix. This conformational change positionsthe fusion peptide for interaction with the cell membrane. In the secondmodel (FIG. 11B), the fusogenic complex is stabilized by the associationof the DP178 domain with the DP107 coiled-coil.

FIG. 12. Motif design using heptad repeat positioning of amino acids ofknown coiled-coils. (The amino acid sequence of GCN4, C-FOS, C-JUN,C-MYC and FLU LOOP 36 are assigned SEQ ID NOs. 84-88, respectively).

FIG. 13. Motif design using proposed heptad repeat positioning of aminoacids of DP107 (SEQ ID NO. 89) and DP178 (SEQ ID NO. 1). SEQ ID NOs. 728and 729 correspond to the amino acid sequence of DP-107 (SEQ ID NO. 89)with 10 and 3 amino acids truncated, respectively, from its C terminus.SEQ ID NOs. 730 and 731 correspond to the amino acid sequence of DP-178(SEQ ID NO. 1) with 8 and 1 amino acids truncated, respectively, fromits C terminus.

FIG. 14. Hybrid motif design crossing GCN4 (SEQ ID NO. 84) and DP107(SEQ ID NO. 89). SEQ ID NOs. 728 and 729 correspond to the amino acidsequence of DP-107 (SEQ ID NO. 89) with 10 and 3 amino acids truncated,respectively, from its C terminus.

FIG. 15. Hybrid motif design crossing GCN4 (SEQ ID NO. 84) and DP178(SEQ ID NO. 1). (SEQ ID NOs. 730 and 731 correspond to the amino acidsequence of DP-178 (SEQ ID NO. 1) with 8 and 1 amino acids truncated,respectively, from its C terminus.)

FIG. 16. Hybrid motif design 107×178×4, crossing DP107 (SEQ ID NO. 89)and DP178 (SEQ ID NO. 1). This motif was found to be the most consistentat identifying relevant DP107-like and DP178-like peptide regions. (Theamino acid sequence of Flu Loop 36 corresponds to SEQ ID NO. 88).

FIG. 17. Hybrid motif design crossing GCN4 (SEQ ID NO. 84), DP107 (SEQID NO. 89), and DP178 (SEQ ID NO. 1).

FIG. 18. Hybrid motif design ALLMOTI5 crossing GCN4 (SEQ ID NO. 84),DP107 (SEQ ID NO. 89), DP178 (SEQ ID NO. 1), c-Fos (SEQ ID NO. 85) c-Jun(SEQ ID NO. 86), c-Myc (SEQ ID NO. 87), and Flu Loop 36 (SEQ ID NO. 88).

FIG. 19. PLZIP motifs designed to identify N-terminal proline-leucinezipper motifs.

FIG. 20. Search results for HIV-1 (BRU isolate) enveloped protein gp41(SEQ ID NO. 90). Sequence search motif designations: Spades (

): 107×178×4; Hearts (♥) ALLMOTI5; Clubs (

): PLZIP; Diamonds (♦): transmembrane region (the putative transmembranedomains were identified using a PC/Gene program designed to search forsuch peptide regions). Asterisk (*): Lupas method. The amino acidsequences identified by each motif are bracketed by the respectivecharacters. Representative sequences chosen based on 107×178×4 searchesare underlined and in bold. DP107 and DP178 sequences are marked, andadditionally double-underlined and italicized.

FIG. 21. Search results for human respiratory syncytial virus (RSV)strain A2 fusion glycoprotein F1 (SEQ ID NO. 91). Sequence search motifdesignations are as in FIG. 20.

FIG. 22. Search results for simian immunodeficiency virus (SIV)enveloped protein gp41 (AGM3 isolate) (SEQ ID NO. 92). Sequence searchmotif designations are as in FIG. 20.

FIG. 23. Search results for canine distemper virus (strainOnderstepoort) fusion glycoprotein 1 (SEQ ID NO. 93). Sequence searchmotif designations are as in FIG. 20.

FIG. 24. Search results for newcastle disease virus (strainAustralia-Victoria/32) fusion glycoprotein F1 (SEQ ID NO. 94). Sequencesearch motif designations are as in FIG. 20.

FIG. 25. Search results for human parainfluenza 3 virus (strain NIH47885) fusion glycoprotein F1 (SEQ ID NO. 95). Sequence search motifdesignations are as in FIG. 20.

FIG. 26. Search results for influenza A virus (strain A/AICHI/2/68)hemagglutinin precursor HA2 (SEQ ID NO. 96). Sequence searchdesignations are as in FIG. 20.

FIGS. 27A-F. Respiratory Syncytial Virus (RSV) peptide antiviral andcircular dichroism data. FIGS. 27A-C: Peptides derived from the F2DP178/DP107-like region. Antiviral and CD data. (Specifically, FIGS.27A-B show the amino acid sequence of RSV F2 (SEQ ID NO. 97), T-142 (SEQID NO. 732), T-143 (SEQ ID NO. 733), T-144 (SEQ ID NO. 734), T-145 (SEQID NO. 735), T-146 (SEQ ID NO. 736), T-147 (SEQ ID NO. 737), T-148 (SEQID NO. 738), T-149 (SEQ ID NO. 739), T-150 (SEQ ID NO. 740), T-151 (SEQID NO. 741), T-152 (SEQ ID NO. 742), T-153 (SEQ ID NO. 743), T-154 (SEQID NO. 744) and T-155 (SEQ ID NO. 745), and FIG. 27C shows the aminoacid sequences of T-22 (SEQ ID NO. 121), T-23 (SEQ ID NO. 746), T-24(SEQ ID NO. 747), T-25 (SEQ ID NO. 748), T-26 (SEQ ID NO. 749), T-27(SEQ ID NO. 750), T-68 (SEQ ID NO. 122), T-334 (SEQ ID NO. 123), T-371(SEQ ID NO. 124), T-372 (SEQ ID NO. 125), T-373 (SEQ ID NO. 126), T-374(SEQ ID NO. 127), T-375 (SEQ ID NO. 128) and T-575 (SEQ ID NO. 129).FIGS. 27D-F. Peptides derived from the F1 DP107-like region. Peptide andCD data. Specifically, FIGS. 27D-E show the amino acid sequences ofF1-107 (SEQ ID NO. 98), T-120 (SEQ ID NO. 751), T-121 (SEQ ID NO. 752),T-122 (SEQ ID NO. 753), T-123 (SEQ ID NO. 754), T-124 (SEQ ID NO. 755),T-125 (SEQ ID NO. 756), T-126 (SEQ ID NO. 757), T-127 (SEQ ID NO. 758),T-128 (SEQ ID NO. 759), T-129 (SEQ ID NO. 760), T-130 (SEQ ID NO. 761),T-131 (SEQ ID NO. 762), T-132 (SEQ ID NO. 763), T-133 (SEQ ID NO. 764),T-134 (SEQ ID NO. 765), T-135 (SEQ ID NO. 766), T-136 (SEQ ID NO. 767),T-137 (SEQ ID NO. 768), T-138 (SEQ ID NO. 769), T-139 (SEQ ID NO. 770),T-140 (SEQ ID NO. 771) and T-141 (SEQ ID NO. 772), and FIG. 27F showsthe amino acid sequences of T-12 (SEQ ID NO. 130), T-13 (SEQ ID NO.131), T-15 (SEQ ID NO. 132), T-19 (SEQ ID NO. 133), T-28 (SEQ ID NO.134), T-29 (amino acid residues 2-36 of SEQ ID NO. 134), T-30 (SEQ IDNO. 135), T-69 (SEQ ID NO. 130), T-70 (SEQ ID NO. 773), T-66 (SEQ ID NO.136), and T-576 (SEQ ID NO. 137).

Antiviral activity (AV) is represented by the following qualitativesymbols:

“−”, negative antiviral activity;

“+/−”, antiviral activity at greater than 100 μg/ml;

“+”, antiviral activity at between 50-100 μg/ml;

“++”, antiviral activity at between 20-50 μg/ml;

“+++”, antiviral activity at between 1-20 μg/ml;

“++++”, antiviral activity at <1 μg/ml.

CD data, referring to the level of helicity is represented by thefollowing qualitative symbol:

“−”, no helicity;

“+”, 25-50% helicity;

“++”, 50-75% helicity;

“+++”, 75-100% helicity.

IC₅₀ refers to the concentration of peptide necessary to produce only50% of the number of syncytial relative to infected control culturescontaining no peptide. IC₅₀ values were obtained using purified peptidesonly.

FIGS. 28A-C. Respiratory Syncytial Virus (RSV) DP178-like region (F1)peptide antiviral and CD data. Antiviral symbols, CD symbols, and IC₅₀are as in FIGS. 27A-F. IC₅₀ values were obtained using purified peptidesonly. Specifically, FIGS. 28A-B show the amino acid sequences of T-67(SEQ ID NO. 774), F1-178 (SEQ ID NO. 99), T-104 (SEQ ID NO. 775), T-105(SEQ ID NO. 776), T-106 (SEQ ID NO. 777), T-107 (SEQ ID NO. 778), T-108(SEQ ID NO. 779), T-109 (SEQ ID NO. 780), T-110 (SEQ ID NO. 781), T-111(SEQ ID NO. 782), T-112 (SEQ ID NO. 783), T-113 (SEQ ID NO. 784), T-114(SEQ ID NO. 785), T-115 (SEQ ID NO. 786), T-116 (SEQ ID NO. 787), T-117(SEQ ID NO. 788), T-118 (SEQ ID NO. 789) and T-119 (SEQ ID NO. 790), andFIG. 28C shows the amino acid sequences of T-71 (SEQ ID NO. 138), T-384(SEQ ID NO. 139), T-613 (SEQ ID NO. 791), T-614 (SEQ ID NO. 792), T-615(SEQ ID NO. 793), T-616 (SEQ ID NO. 140), T-617 (SEQ ID NO. 141), T-662(SEQ ID NO. 142), T-663 (SEQ ID NO. 794), T-665 (SEQ ID NO. 143), T-666(SEQ ID NO. 795), T-667 (SEQ ID NO. 796), T-668 (SEQ ID NO. 797), T-669(SEQ ID NO. 798), T-670 (SEQ ID NO. 799), T-671 (SEQ ID NO. 144), T-672(SEQ ID NO. 800), T-673 (SEQ ID NO. 801), T-674 (SEQ ID NO. 802), T-675(SEQ ID NO. 803), T-676 (SEQ ID NO. 804) and T-730 (SEQ ID NO. 145).

FIGS. 29A-E. Peptides derived from the HPIV3 F1 DP107-like region.Peptide antiviral and CD data. Antiviral symbols, CD symbols, and IC₅₀are as in FIGS. 27A-F. Purified peptides were used to obtain IC₅₀values, except where the values are marked by an asterisk (*), in whichcases, the IC₅₀ values were obtained using a crude peptide preparation.Specifically, FIGS. 29A-C show the amino acid sequences of HPF3-107 (SEQID NO. 805), HPF3-157 (SEQ ID NO. 806), HPF3-158 (SEQ ID NO. 807),HPF3-159 (SEQ ID NO. 808), HPF3-160 (SEQ ID NO. 809), HPF3-161 (SEQ IDNO. 810), HPF3-162 (SEQ ID NO. 811), HPF3-163 (SEQ ID NO. 812), HPF3-164(SEQ ID NO. 813), HPF3-165 (SEQ ID NO. 814), HPF3-166 (SEQ ID NO. 815),HPF3-167 (SEQ ID NO. 816), HPF3-168 (SEQ ID NO. 817), HPF3-169 (SEQ IDNO. 818), HPF3-170 (SEQ ID NO. 819), HPF3-171 (SEQ ID NO. 820), HPF3-172(SEQ ID NO. 821), HPF3-173 (SEQ ID NO. 822), HPF3-174 (SEQ ID NO. 823),T-40 (SEQ ID NO. 824), HPF3-175 (SEQ ID NO. 825), HPF3-176 (SEQ ID NO.826), HPF3-177 (SEQ ID NO. 827), HPF3-178 (SEQ ID NO. 828), HPF3-179(SEQ ID NO. 829), HPF3-180 (SEQ ID NO. 830), HPF3-181 (SEQ ID NO. 831),HPF3-182 (SEQ ID NO. 832), HPF3-183 (SEQ ID NO. 833), HPF3-184 (SEQ IDNO. 834), HPF3-185 (SEQ ID NO. 835), HPF3-186 (SEQ ID NO. 836), HPF3-187(SEQ ID NO. 837) and HPF3-188 (SEQ ID NO. 838), and FIGS. 29D-E show theamino acid sequences T-42 (SEQ ID NO. 146), T-43 (SEQ ID NO. 839), T-39(SEQ ID NO. 147), T-38 (SEQ ID NO. 840), T-40 (SEQ ID NO. 148), T-44(SEQ ID NO. 841), T-45 (SEQ ID NO. 149), T-46 (SEQ ID NO. 150) and T-582(SEQ ID NO. 151).

HPIV3 peptide T-184 CD spectrum at 1° C. in 0.1M NaCl 10 mM KPO₄, pH7.0. The data demonstrates the peptide's helical secondary structure(θ_(222/208)=1.2) over a wide range of concentrations (100-1500 μM).This evidence is consistent with the peptide forming a helicalcoiled-coil structure.

FIGS. 30A-C. Peptides derived from the HPIV3 F1 DP178-like region.Peptide antiviral and CD data. Antiviral symbols, CD symbols, and IC50are as in FIGS. 27A-F. Purified peptides were used to obtain IC₅₀values, except where the values are marked by an asterisk (*), in whichcases, the IC₅₀ values were obtained using a crude peptide preparation.Specifically, FIGS. 30A-B show the amino acid sequences of HPF3-178 (SEQID NO. 101), HPF3-189 (SEQ ID NO. 842), HPF3-190 (SEQ ID NO. 843),HPF3-191 (SEQ ID NO. 844), HPF3-192 (SEQ ID NO. 845), HPF3-193 (SEQ IDNO. 846), HPF3-194 (SEQ ID NO. 847), HPF3-195 (SEQ ID NO. 848), HPF3-196(SEQ ID NO. 849), HPF3-197 (SEQ ID NO. 850), HPF3-198 (SEQ ID NO. 851),HPF3-199 (SEQ ID NO. 852), HPF3-200 (SEQ ID NO. 853), HPF3-201 (SEQ IDNO. 854), HPF3-202 (SEQ ID NO. 855), HPF3-203 (SEQ ID NO. 856), HPF3-204(SEQ ID NO. 857), HPF3-205 (SEQ ID NO. 858), HPF3-206 (SEQ ID NO. 859),HPF3-207 (SEQ ID NO. 860), HPF3-208 (SEQ ID NO. 861), HPF3-209 (SEQ IDNO. 862) and HPF3-210 (SEQ ID NO. 863), and FIG. 30C shows the aminoacid sequences of T-269 (SEQ ID NO. 152), T-626 (SEQ ID NO. 153), T-383(SEQ ID NO. 154), T-577 (SEQ ID NO. 155), T-578 (SEQ ID NO. 156) andT-579 (SEQ ID NO. 157).

FIG. 31. Motif search results for simian immunodeficiency virus (SIV)isolate MM251, enveloped polyprotein gp41 (SEQ ID NO. 102). Sequencesearch designations are as in FIG. 20.

FIG. 32. Motif search results for Epstein-Barr Virus (Strain B95-8),glycoprotein gp110 precursor (designated gp115), or BALF4 (SEQ ID NO.103). Sequence search designations are as in FIG. 20.

FIG. 33. Motif search results for Epstein-Barr Virus (Strain B95-8),BZLF1 trans-activator protein (designated EB1 or Zebra) (SEQ ID NO.104). Sequence search designations are as in FIG. 20. Additionally, “@”refers to a well known DNA binding domain and “+” refers to a well knowndimerization domain, as defined by Flemington and Speck (Flemington, E.and Speck, S. H., 1990, Proc. Natl. Acad. Sci. USA 87:9459-9463).

FIG. 34. Motif search results for measles virus (strain Edmonston),fusion glycoprotein F1 (SEQ ID NO. 105). Sequence search designationsare as in FIG. 20.

FIG. 35. Motif search results for Hepatitis B Virus (Subtype AYW), majorsurface antigen precursor S (SEQ ID NO. 106). Sequence searchdesignations are as in FIG. 20.

FIG. 36. Motif search results for simian Mason-Pfizer monkey virus,enveloped (TM) protein gp20 (SEQ ID NO. 107). Sequence searchdesignations are as in FIG. 20.

FIG. 37. Motif search results for Pseudomonas aerginosa, fimbrialprotein (Pilin) (SEQ ID NO. 108). Sequence search designations are as inFIG. 20.

FIG. 38. Motif search results for Neisseria gonorrhoeae fimbrial protein(Pilin) (SEQ ID NO. 109). Sequence search designations are as in FIG.20.

FIG. 39. Motif search results for Hemophilus influenzae fimbrial protein(SEQ ID NO. 110). Sequence search designations are as in FIG. 20.

FIG. 40. Motif search results for Staphylococcus aureus, toxic shocksyndrome toxin-1 (SEQ ID NO. 111). Sequence search designations are asin FIG. 20.

FIG. 41. Motif search results for Staphylococcus aureus enterotoxin TypeE (SEQ ID NO. 112). Sequence search designations are as in FIG. 20.

FIG. 42. Motif search results for Staphylococcus aureus enterotoxin A(SEQ ID NO. 113). Sequence search designations are as in FIG. 20.

FIG. 43. Motif search results for Escherichia coli, heat labileenterotoxin A (SEQ ID NO. 114). Sequence search designations are as inFIG. 20.

FIG. 44. Motif search results for human c-fos proto-oncoprotein (SEQ IDNO. 115). Sequence search designations are as in FIG. 20.

FIG. 45. Motif search results for human lupus KU autoantigen protein P70(SEQ ID NO. 116). Sequence search designations are as in FIG. 20.

FIG. 46. Motif search results for human zinc finger protein 10 (SEQ IDNO. 117). Sequence search designations are as in FIG. 20.

FIGS. 47A-B. Measles virus (MeV) fusion protein DP178-like regionantiviral and CD data. Antiviral symbols, CD symbols, and IC50 are as inFIGS. 27A-F. IC50 values were obtained using purified peptides.Specifically, FIGS. 47A-B show the amino acid sequence of amino acidresidues 438-488 of the MeVprotein (SEQ ID NO. 864) and the amino acidsequences of T-252A0 (SEQ ID NO. 118), T-253A0 (SEQ ID NO. 866), T-254A0(SEQ ID NO. 867), T-255A0 (SEQ ID NO. 868), T-256A0 (SEQ ID NO. 869),T-257B1, C1 (SEQ ID NO. 870), T-258B1 (SEQ ID NO. 871), T-259B1 (SEQ IDNO. 872), T-260B1 (SEQ ID NO. 873), T-261A0 (SEQ ID NO. 874), T-262B1(SEQ ID NO. 875), T-263B1 (SEQ ID NO. 876), T-264B1 (SEQ ID NO. 877),T-265B1 (SEQ ID NO. 878), T-266A0 (SEQ ID NO. 879), T-267A0 (SEQ ID NO.880) and T-268A0 (SEQ ID NO. 881),

FIGS. 48A-B. Simian immunodeficiency virus (SIV) TM (fusion) proteinDP178-like region antiviral data. Antiviral symbols are as in FIGS.27A-F “NT”, not tested. Specifically, FIGS. 48A-B show the amino acidsequence of amino acid residues 245-291 of the Simian ImmunodeficiencyVirus MM251protein (SEQ ID NO. 120) and the amino acid sequences ofT-390 (SEQ ID NO. 882), T-391 (SEQ ID NO. 883), T-392 (SEQ ID NO. 884),T-393 (SEQ ID NO. 885), T-394 (SEQ ID NO. 886), T-395 (SEQ ID NO. 887),T-396 (SEQ ID NO. 888), T-397 (SEQ ID NO. 889), T-398 (SEQ ID NO. 890),T-399 (SEQ ID NO. 891) and T-400 (SEQ ID NO. 892),

FIGS. 49A-L. DPI 78-derived peptide antiviral data. The peptides listedherein were derived from the region surrounding the HIV-1 BRU isolateDP178 region (e.g., gp41 amino acid residues 615-717).

In instances where peptides contained DP178 point mutations, the mutatedamino acid residues are shown with a shaded background. In instances inwhich the test peptide has had an amino and/or carboxy-terminal groupadded or removed (apart from the standard amido- and acetyl-blockinggroups found on such peptides), such modifications are indicated. FIGS.49A-D: The column to the immediate right of the name of the test peptideindicates the size of the test peptide and points out whether thepeptide is derived from a one amino acid peptide “walk” across the DP178region. The next column to the right indicates whether the test peptidecontains a point mutation, while the column to its right indicateswhether certain amino acid residues have been added to or removed fromthe DP178-derived amino acid sequence. Specifically, the amino acidsequence depicted in row 5 of FIGS. 49A-D corresponds to SEQ ID NO. 210,and FIGS. 49A-D show the amino acid sequences of T661 (SEQ ID NO. 893),T660 (SEQ ID NO. 894), T659 (SEQ ID NO. 895), T658 (SEQ ID NO. 896),T657 (SEQ ID NO. 897), T656 (SEQ ID NO. 898), T655 (SEQ ID NO. 899),T654 (SEQ ID NO. 900), T653 (SEQ ID NO. 901), T652 (SEQ ID NO. 902),T651 (SEQ ID NO. 903), T625 (SEQ ID NO. 904), T650 (SEQ ID NO. 905),T649 (SEQ ID NO. 906), T624 (SEQ ID NO. 907), T50 (SEQ ID NO. 908), T648(SEQ ID NO. 909), T647 (SEQ ID NO. 910), T711 (SEQ ID NO. 911), T621(SEQ ID NO. 912), T646 (SEQ ID NO. 913), T645 (SEQ ID NO. 914), T644(SEQ ID NO. 915), T643 (SEQ ID NO. 916), T642 (SEQ ID NO. 917), T622(SEQ ID NO. 918), T623 (SEQ ID NO. 919), T51 (SEQ ID NO. 920), T641 (SEQID NO. 921), T640 (SEQ ID NO. 922) and T20 (SEQ ID NO. 1). The aminoacid sequence depicted in row 44 of FIGS. 49A-D corresponds to SEQ IDNO. 160. FIGS. 49A-D further shows the amino acid sequences of T20 (SEQID NO. 1), T639 (SEQ ID NO. 925), T638 (SEQ ID NO. 926), T637 (SEQ IDNO. 927), T636 (SEQ ID NO. 928), T635 (SEQ ID NO. 929), T634 (SEQ ID NO.930), T633 (SEQ ID NO. 931), T632 (SEQ ID NO. 932), T631 (SEQ ID NO.933), T630 (SEQ ID NO. 934), T629 (SEQ ID NO. 935), T628 (SEQ ID NO.936) and T627 (SEQ ID NO. 937). FIGS. 49E-H: The column to the immediateright of the test peptide name indicates whether the peptide representsa DP178 truncation, the next column to the right points out whether thepeptide contains a point mutation, and the column to its right indicateswhether the peptide contains amino acids which have been added to orremoved from the DP178 sequence itself. Specifically, the amino acidsequence depicted in row 7 of FIGS. 49E-H corresponds to SEQ ID NO. 962,and FIGS. 49 E-H show the amino acid sequences of T4 (SEQ ID NO. 938),T228 (SEQ ID NO. 939), T700 (SEQ ID NO. 940), T715 (SEQ ID NO. 941),T65/T716 (SEQ ID NO. 942), T714 (SEQ ID NO. 943), T712 (SEQ ID NO. 944),T64 (SEQ ID NO. 945), T63 (SEQ ID NO. 946), T62 (SEQ ID NO. 947), T3(SEQ ID NO. 948), T61/T102 (SEQ ID NO. 949), T217 (SEQ ID NO. 950), T218(SEQ ID NO. 951), T219 (SEQ ID NO. 952), T220 (SEQ ID NO. 953), T221(SEQ ID NO. 954), T234 (SEQ ID NO. 161), T235 (SEQ ID NO. 162), T570(SEQ ID NO. 163), T381 (SEQ ID NO. 164), T382 (SEQ ID NO. 955), T677(SEQ ID NO. 165), T376 (SEQ ID NO. 166), T589 (SEQ ID NO. 166), T377(SEQ ID NO. 167), T590 (SEQ ID NO. 167), T378 (SEQ ID NO. 168), T591(SEQ ID NO. 168), T270 (SEQ ID NO. 169), T271 (SEQ ID NO. 170), T272(amino acid residues 2-14 of SEQ ID NO. 167), T273 (SEQ ID NO. 171),T608 (SEQ ID NO. 172), T609 (SEQ ID NO. 173), T610 (SEQ ID NO. 174),T611 (SEQ ID NO. 175), T612 (SEQ ID NO. 176), T222 (SEQ ID NO. 956),T223 (SEQ ID NO. 957), T60/T224 (SEQ ID NO. 958), T225 (SEQ ID NO. 959),T226 (SEQ ID NO. 960) and T227 (SEQ ID NO. 961). FIGS. 49I-L: The columnto the immediate right of the test peptide name indicates whether thetest peptide contains a point mutation, while the column to its rightindicates whether amino acid residues have been added to or removed fromthe DP178 sequence itself. IC₅₀ is as defined in FIGS. 27A-E, and IC50values were obtained using purified peptides except where marked with anasterisk (*), in which case the IC50 was obtained using a crude peptidepreparation. Specifically, the amino acid sequence depicted in row 8 ofFIGS. 49I-L corresponds to SEQ ID NO. 962, and FIGS. 49I-L show theamino acid sequences of T595 (SEQ ID NO. 177), T574 (SEQ ID NO. 963),T680 (SEQ ID NO. 964), T573 (SEQ ID NO. 965), T84 (SEQ ID NO. 966), T83(SEQ ID NO. 967), T708 (SEQ ID NO. 968), T707 (SEQ ID NO. 969), T20 (SEQID NO. 1), T95 (SEQ ID NO. 178), T96 (SEQ ID NO. 179), T97 (SEQ ID NO.180), T98 (SEQ ID NO. 181), T99 (SEQ ID NO. 182), T103 (SEQ ID NO. 183),T212 (SEQ ID NO. 184), T213 (SEQ ID NO. 185), T214 (SEQ ID NO. 186),T215 (SEQ ID NO. 187), T216 (SEQ ID NO. 188), T229 (SEQ ID NO. 189),T230 (SEQ ID NO. 190), T231 (SEQ ID NO. 191), T379 (SEQ ID NO. 192),T701 (SEQ ID NO. 193), T702 (SEQ ID NO. 194), T703 (SEQ ID NO. 195),T704 (SEQ ID NO. 196), T705 (SEQ ID NO. 197), T706 (SEQ ID NO. 198),T156 (SEQ ID NO. 199), T89 (SEQ ID NO. 199) and T90 (SEQ ID NO. 200).

FIG. 50A-B. DP107 and DP107 gp41 region truncated peptide antiviraldata. IC50 as defined in FIGS. 27A-F, and IC50 values were obtainedusing purified peptides except where marked with an asterisk (*), inwhich case the IC50 was obtained using a crude peptide preparation.Specifically, the amino acid sequence depicted in row 5 of FIGS. 50A-Bcorresponds to SEQ ID NO. 201, and FIGS. 50A-B also show the amino acidsequences of T10 (SEQ ID NO. 972), T37 (SEQ ID NO. 973), T48 (SEQ ID NO.974), T36 (SEQ ID NO. 975), T8 (SEQ ID NO. 976), T33 (SEQ ID NO. 977),T21 (SEQ ID NO. 978), T85 (SEQ ID NO. 979), T1 (SEQ ID NO. 980), T2 (SEQID NO. 981), T7 (SEQ ID NO. 982), T34 (SEQ ID NO. 983), T6 (SEQ ID NO.984), T35 (SEQ ID NO. 985) and T5 (SEQ ID NO. 986).

FIGS. 51A-C. Epstein-Barr virus Strain B95-8 BZLF1 DP178/DP107 analogregion peptide walks and electrophoretic mobility shift assay results.The peptides (T-423 to T-446, FIGS. 51A-B; T-447 to T-461, FIG. 51C)represent one amino acid residue “walks” through the EBV Zebra proteinregion from amino acid residue 173 to 246. Specifically, FIG. 51A showsan amino acid sequence that corresponds to amino acid residues 173-219of the Epstein-Barr Virus strain B95.8 BZLF1 transactivator protein EB1or ZEBRA (SEQ ID NO. 987), and the amino acid sequences of T-423 (SEQ IDNO. 988), T-424 (SEQ ID NO. 989), T-425 (SEQ ID NO. 990), T-426 (SEQ IDNO. 991), T-427 (SEQ ID NO. 992), T-428 (SEQ ID NO. 993), T-429 (SEQ IDNO. 994), T-430 (SEQ ID NO. 995), T-431 (SEQ ID NO. 996), T-432 (SEQ IDNO. 997), T-433 (SEQ ID NO. 998) and T-434 (SEQ ID NO. 999). FIG. 51Bshows an amino acid sequence that corresponds to amino acid residues185-230 of the Epstein-Barr Virus strain B95.8 BZLF1 transactivatorprotein EB1 or ZEBRA (SEQ ID NO. 203), and amino acid sequences of T-435(SEQ ID NO. 1000), T-436 (SEQ ID NO. 1001), T-437 (SEQ ID NO. 1002),T-438 (SEQ ID NO. 1003), T-439 (SEQ ID NO. 1004), T-440 (SEQ ID NO.1005), T-441 (SEQ ID NO. 1006), T-442 (SEQ ID NO. 1007), T-443 (SEQ IDNO. 1008), T-444 (SEQ ID NO. 1009), T-445 (SEQ ID NO. 1010), and T-446(SEQ ID NO. 1011), FIG. 51C shows two amino acid sequences thatcorrespond to residues 197-242 (SEQ ID NO. 205) and residues 209-246(SEQ ID NO. 207) of the Epstein-Barr Virus strain B95.8 BZLF1transactivator protein EB1 or ZEBRA, and the amino acid sequences ofT-447 (SEQ ID NO. 1012), T-448 (SEQ ID NO. 1013), T-449 (SEQ ID NO.1014), T-450 (SEQ ID NO. 1015), T-451 (SEQ ID NO. 1016), T-452 (SEQ IDNO. 1017), T-453 (SEQ ID NO. 1018), T-454 (SEQ ID NO. 1019), T-455 (SEQID NO. 1020), T-456 (SEQ ID NO. 1021), T-457 (SEQ ID NO. 1022), T-458(SEQ ID NO. 1023), T-459 (SEQ ID NO. 1024), T-460 (SEQ ID NO. 1025) andT-461 (SEQ ID NO. 1026).

The amino acid residue within this region which corresponds to the firstamino acid residue of each peptide is listed to the left of eachpeptide, while the amino acid residue within this region whichcorresponds to the last amino acid residue of each peptide is listed tothe right of each peptide. The length of each test peptide is listed atthe far right of each line, under the heading “Res”.

“ACT” refers to a test peptide's ability to inhibit Zebra binding to itsresponse element. “+” refers to a visible, but incomplete, abrogation ofthe response element/Zebra homodimer complex; “+++” refers to a completeabrogation of the complex; and “−” represents a lack of complexdisruption.

FIGS. 52A-B. Hepatitis B virus subtype AYW major surface antigenprecursor S protein DP178/DP107 analog region and peptide walks. FIG.52A depicts Domain I (S protein amino acid residues 174-219) (SEQ ID NO.208), which contains a potential DP178/DP107 analog region. In addition,FIG. 52A shows peptides which represent one amino acid peptide “walks”(SEQ ID NOs. 1027-1037, respectively) through domain I. FIG. 52B depictsDomain II (S protein amino acid residues 233-290) (SEQ ID NO. 1038),which contains a second potential DP178/DP107 analog region. Inaddition, FIG. 52B shows peptides which represent one amino acid peptide“walks” (SEQ ID NOs. 1039-1061, respectively) through domain II.

5. DETAILED DESCRIPTION OF THE INVENTION

Described herein are peptides which may exhibit antifusogenic activity,antiviral capability, and/or the ability to modulate intracellularprocesses involving coiled-coil peptide structures. The peptidesdescribed include, first, DP178 (SEQ ID NO:1), a gp41-derived 36 aminoacid peptide and fragments and analogs of DP178.

In addition, the peptides of the invention described herein includepeptides which are DP107 analogs. DP107 (SEQ ID NO: 89) is a 38 aminoacid peptide corresponding to residues 558 to 595 of the HIV-1_(LAI)transmembrane (TM) gp41 protein. Such DP107 analogs may exhibitantifusogenic capability, antiviral activity or an ability to modulateintracellular processes involving coiled-coil structures.

Further, peptides of the invention include DP107 and DP178 are describedherein having amino acid sequences recognized by the 107×178×4,ALLMOTI5, and PLZIP search motifs. Such motifs are also discussed.

Also described here are antifusogenic, antiviral, intracellularmodulatory, and diagnostic uses of the peptides of the invention.Further, procedures are described for the use of the peptides of theinvention for the identification of compounds exhibiting antifusogenic,antiviral or intracellular modulatory activity.

While not limited to any theory of operation, the following model isproposed to explain the potent anti-HIV activity of DP178, based, inpart, on the experiments described in the Examples, infra. In the HIVprotein, gp41, DP178 corresponds to a putative α-helix region located inthe C-terminal end of the gp41 ectodomain, and appears to associate witha distal site on gp41 whose interactive structure is influenced by theleucine zipper motif, a coiled-coil structure, referred to as DP107. Theassociation of these two domains may reflect a molecular linkage or“molecular clasp” intimately involved in the fusion process. It is ofinterest that mutations in the C-terminal α-helix motif of gp41 (i.e.,the D178 domain) tend to enhance the fusion ability of gp41, whereasmutations in the leucine zipper region (i.e., the DP107 domain) decreaseor abolish the fusion ability of the viral protein. It may be that theleucine zipper motif is involved in membrane fusion while the C-terminalα-helix motif serves as a molecular safety to regulate the availabilityof the leucine zipper during virus-induced membrane fusion.

On the basis of the foregoing, two models are proposed of gp4′-mediatedmembrane fusion which are schematically shown in FIGS. 11A-B. The reasonfor proposing two models is that the temporal nature of the interactionbetween the regions defined by DP107 and DP178 cannot, as yet, bepinpointed. Each model envisions two conformations for gp41—one in a“native” state as it might be found on a resting virion. The other in a“fusogenic” state to reflect conformational changes triggered followingbinding of gp120 to CD4 and just prior to fusion with the target cellmembrane. The strong binding affinity between gp120 and CD4 may actuallyrepresent the trigger for the fusion process obviating the need for a pHchange such as occurs for viruses that fuse within intracellularvesicles. The two major features of both models are: (1) the leucinezipper sequences (DP107) in each chain of oligomeric enveloped are heldapart in the native state and are only allowed access to one another inthe fusogenic state so as to form the extremely stable coiled-coils, and(2) association of the DP178 and DP107 sites as they exist in gp41 occureither in the native or fusogenic state. FIG. 11A depicts DP178/DP107interaction in the native state as a molecular clasp. On the other hand,if one assumes that the most stable form of the enveloped occurs in thefusogenic state, the model in FIG. 11B can be considered.

When synthesized as peptides, both DP107 and DP178 are potent inhibitorsof HIV infection and fusion, probably by virtue of their ability to formcomplexes with viral gp41 and interfere with its fusogenic process;e.g., during the structural transition of the viral protein from thenative structure to the fusogenic state, the DP178 and DP107 peptidesmay gain access to their respective binding sites on the viral gp41, andexert a disruptive influence. DP107 peptides which demonstrate anti-HIVactivity are described in Applicants' co-pending application Ser. No.08/264,531, filed Jun. 23, 1994, which is incorporated by referenceherein in its entirety.

As shown in the Examples, infra, a truncated recombinant gp41 proteincorresponding to the ectodomain of gp41 containing both DP107 and DP178domains (excluding the fusion peptide, transmembrane region andcytoplasmic domain of gp41) did not inhibit HIV-1 induced fusion.However, when a single mutation was introduced to disrupt thecoiled-coil structure of the DP107 domain—a mutation which results in atotal loss of biological activity of DP107 peptides—the inactiverecombinant protein was transformed to an active inhibitor of HIV-1induced fusion. This transformation may result from liberation of thepotent DP178 domain from a molecular clasp with the leucine zipper,DP107 domain.

For clarity of discussion, the invention will be described primarily forDP178 peptide inhibitors of HIV. However, the principles may beanalogously applied to other viruses, both enveloped and nonenveloped,and to other non-viral organisms.

5.1. DP178 and DP178-Like Peptides

The DP178 peptide (SEQ ID: 1) of the invention corresponds to amino acidresidues 638 to 673 of the transmembrane protein gp41 from theHIV-1_(LAI) isolate, and has the 36 amino acid sequence (reading fromamino to carboxy terminus):

NH₂-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:1)

In addition to the full-length DP178 (SEQ ID:1) 36-mer, the peptides ofthe invention may include truncations of the DP178 (SEQ ID:1) peptidewhich exhibit antifusogenic activity, antiviral activity and/or theability to modulate intracellular processes involving coiled-coilpeptide structures. Truncations of DP178 (SEQ ID:1) peptides maycomprise peptides of between 3 and 36 amino acid residues (i.e.,peptides ranging in size from a tripeptide to a 36-mer polypeptide), asshown in Tables I and IA, below. Peptide sequences in these tables arelisted from amino (left) to carboxy (right) terminus. “X” may representan amino group (—NH2) and “Z” may represent a carboxyl (—COOH) group.Alternatively, “X” may represent a hydrophobic group, including but notlimited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attachedmacromolecular group, including but not limited to a lipid-fatty acidconjugate, polyethylene glycol, carbohydrate or peptide group. Further,“Z” may represent an amido group; a T-butoxycarbonyl group; or acovalently attached macromolecular group, including but not limited to alipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptidegroup. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE I DP178 (SEQ ID:1) CARBOXY TRUNCATIONS X-YTS-Z X-YTSL-Z X-YTSLI-ZX-YTSLIH-Z X-YTSLIHS-Z X-YTSLIHSL-Z X-YTSLIHSLI-Z X-YTSLIHSLIE-ZX-YTSLIHSLIEE-Z X-YTSLIHSLIEES-Z X-YTSLIHSLIEESQ-Z X-YTSLIHSLIEESQN-ZX-YTSLIHSLIEESQNQ-Z X-YTSLIHSLIEESQNQQ-Z X-YTSLIHSLIEESQNQQE-ZX-YTSLIHSLIEESQNQQEK-Z X-YTSLIHSLIEESQNQQEKN-Z X-YTSLIHSLIEESQNQQEKNE-ZX-YTSLIHSLIEESQNQQEKNEQ-Z X-YTSLIHSLIEESQNQQEKNEQE-ZX-YTSLIHSLIEESQNQQEKNEQEL-Z X-YTSLIHSLIEESQNQQEKNEQELL-ZX-YTSLIHSLIEESQNQQEKNEQELLE-Z X-YTSLIHSLIEESQNQQEKNEQELLEL-ZX-YTSLIHSLIEESQNQQEKNEQELLELD-Z X-YTSLIHSLIEESQNQQEKNEQELLELDK-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKW-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWA-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWAS-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASL-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLW-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWN-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNW-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (These amino acid sequences areassigned SEQ ID Nos. 246-278 and 1, respectively). The one letter aminoacid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IA DP178 (SEQ ID:1) AMINO TRUNCATIONS X-NWF-Z X-WNWF-Z X-LWNWF-ZX-SLWNWF-Z X-ASLWNWF-Z X-WASLWNWF-Z X-KWASLWNWF-Z X-DKWASLWNWF-ZX-LDKWASLWNWF-Z X-ELDKWASLWNWF-Z X-LELDKWASLWNWF-Z X-LLELDKWASLWNWF-ZX-ELLELDKWASLWNWF-Z X-QELLELDKWASLWNWF-Z X-EQELLELDKWASLWNWF-ZX-NEQELLELDKWASLWNWF-Z X-KNEQELLELDKWASLWNWF-Z X-EKNEQELLELDKWASLWNWF-ZX-QEKNEQELLELDKWASLWNWF-Z X-QQEKNEQELLELDKWASLWNWF-ZX-NQQEKNEQELLELDKWASLWNWF-Z X-QNQQEKNEQELLELDKWASLWNWF-ZX-SQNQQEKNEQELLELDKWASLWNWF-Z X-ESQNQQEKNEQELLELDKWASLWNWF-ZX-EESQNQQEKNEQELLELDKWASLWNWF-Z X-IEESQNQQEKNEQELLELDKWASLWNWF-ZX-LIEESQNQQEKNEQELLELDKWASLWNWF-Z X-SLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-HSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-IHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-LIHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-SLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-TSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (These amino acid sequences areassigned SEQ ID Nos. 279-311 and 1, respectively). The one letter aminoacid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl group; a macromolecular carriergroup including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP178-like peptides.“DP178-like”, as used herein, refers, first, to DP178 and DP178truncations which contain one or more amino acid substitutions,insertions and/or deletions. Second, “DP-178-like” refers to peptidesequences identified or recognized by the ALLMOTI5, 107×178×4 and PLZIPsearch motifs described herein, having structural and/or amino acidmotif similarity to DP178. The DP178-like peptides of the invention mayexhibit antifusogenic or antiviral activity, or may exhibit the abilityto modulate intracellular processes involving coiled-coil peptides.Further, such DP178-like peptides may possess additional advantageousfeatures, such as, for example, increased bioavailability, and/orstability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but thereexists a striking amino acid conservation within the DP178-correspondingregions of HIV-1 and HIV-2. The amino acid conservation is of a periodicnature, suggesting some conservation of structure and/or function.Therefore, one possible class of amino acid substitutions would includethose amino acid changes which are predicted to stabilize the structureof the DP178 peptides of the invention. Utilizing the DP178 and DP178analog sequences described herein, the skilled artisan can readilycompile DP178 consensus sequences and ascertain from these, conservedamino acid residues which would represent preferred amino acidsubstitutions.

The amino acid substitutions may be of a conserved or non-conservednature. Conserved amino acid substitutions consist of replacing one ormore amino acids of the DP178 (SEQ ID:1) peptide sequence with aminoacids of similar charge, size, and/or hydrophobicity characteristics,such as, for example, a glutamic acid (E) to aspartic acid (D) aminoacid substitution. Non-conserved substitutions consist of replacing oneor more amino acids of the DP178 (SEQ ID:1) peptide sequence with aminoacids possessing dissimilar charge, size, and/or hydrophobicitycharacteristics, such as, for example, a glutamic acid (E) to valine (V)substitution.

Amino acid insertions may consist of single amino acid residues orstretches of residues. The insertions may be made at the carboxy oramino terminal end of the DP178 or DP178 truncated peptides, as well asat a position internal to the peptide. Such insertions will generallyrange from 2 to 15 amino acids in length. It is contemplated thatinsertions made at either the carboxy or amino terminus of the peptideof interest may be of a broader size range, with about 2 to about 50amino acids being preferred. One or more such insertions may beintroduced into DP178 (SEQ. ID:1) or DP178 truncations, as long as suchinsertions result in peptides which may still be recognized by the107×178×4, ALLMOTI5 or PLZIP search motifs described herein, or may,alternatively, exhibit antifusogenic or antiviral activity, or exhibitthe ability to modulate intracellular processes involving coiled-coilpeptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging fromabout 2 to about 50 amino acid residues in length, corresponding to gp41protein regions either amino to or carboxy to the actual DP178 gp41amino acid sequence, respectively. Thus, a preferred amino terminal orcarboxy terminal amino acid insertion would contain gp41 amino acidsequences found immediately amino to or carboxy to the DP178 region ofthe gp41 protein.

Deletions of DP178 (SEQ ID:1) or DP178 truncations are also within thescope of the invention. Such deletions consist of the removal of one ormore amino acids from the DP178 or DP178-like peptide sequence, with thelower limit length of the resulting peptide sequence being 4 to 6 aminoacids. Such deletions may involve a single contiguous or greater thanone discrete portion of the peptide sequences. One or more suchdeletions may be introduced into DP178 (SEQ. ID: 1) or DP178truncations, as long as such deletions result in peptides which maystill be recognized by the 107×178×4, ALLMOTI5 or PLZIP search motifsdescribed herein, or may, alternatively, exhibit antifusogenic orantiviral activity, or exhibit the ability to modulate intracellularprocesses involving coiled-coil peptide structures.

DP178 analogs are further described, below, in Section 5.3.

5.2. DP107 and DP107-Like Peptides

Further, the peptides of the invention include peptides having aminoacid sequences corresponding to DP107 analogs. DP107 is a 38 amino acidpeptide which exhibits potent antiviral activity, and corresponds toresidues 558 to 595 of HIV-1_(LAI) transmembrane (TM) gp41 protein, asshown here:

NH₂-NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ-COOH (SEQ ID NO. 89)

In addition to the full-length DP107 (SEQ (SEQ ID NO. 89) 38-mer, thepeptides of the invention may include truncations of the DP107 (SEQ (SEQID NO. 89) peptide which exhibit antifusogenic activity, antiviralactivity and/or the ability to modulate intracellular processesinvolving coiled-coil peptide structures. Truncations of DP107 (SEQ ID(SEQ ID NO. 89) peptides may comprise peptides of between 3 and 38 aminoacid residues (i.e., peptides ranging in size from a tripeptide to a38-mer polypeptide), as shown in Tables II and IIA, below. Peptidesequences in these tables are listed from amino (left) to carboxy(right) terminus. “X” may represent an amino group (—NH2) and “Z” mayrepresent a carboxyl (—COOH) group. Alternatively, “X” may represent ahydrophobic group, including but not limited to carbobenzyl, dansyl, orT-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC)group; or a covalently attached macromolecular group, including but notlimited to a lipid-fatty acid conjugate, polyethylene glycol,carbohydrate or peptide group. Further, “Z” may represent an amidogroup; a T-butoxycarbonyl group; or a covalently attached macromoleculargroup, including but not limited to a lipid-fatty acid conjugate,polyethylene glycol, carbohydrate or peptide group. A preferred “X” or“Z” macromolecular group is a peptide group.

TABLE II DP107 (SEQ ID:25) CARBOXY TRUNCATIONS X-NNL-Z X-NNLL-ZX-NNLLR-Z X-NNLLRA-Z X-NNLLRAI-Z X-NNLLRAIE-Z X-NNLLRAIEA-ZX-NNLLRAIEAQ-Z X-NNLLRAIEAQQ-Z X-NNLLRAIEAQQH-Z X-NNLLRAIEAQQHL-ZX-NNLLRAIEAQQHLL-Z X-NNLLRAIEAQQHLLQ-Z X-NNLLRAIEAQQHLLQL-ZX-NNLLRAIEAQQHLLQLT-Z X-NNLLRAIEAQQHLLQLTV-Z X-NNLLRAIEAQQHLLQLTVW-ZX-NNLLRAIEAQQHLLQLTVWQ-Z X-NNLLRAIEAQQHLLQLTVWQI-ZX-NNLLRAIEAQQHLLQLTVWQIK-Z X-NNLLRAIEAQQHLLQLTVWQIKQ-ZX-NNLLRAIEAQQHLLQLTVWQIKQL-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQ-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQA-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQAR-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARI-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQARIL-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILA-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQARILAV-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVE-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVER-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERY-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYL-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLK-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKD-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-Z (These amino acid sequencesare assigned SEQ ID Nos. 312-346 and 89, respectively). The one letteramino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IIA DP178 (SEQ ID:89) AMINO TRUNCATIONS X-KDQ-Z X-LKDQ-Z X-YLKDQ-ZX-RYLKDQ-Z X-ERYLKDQ-Z X-VERYLKDQ-Z X-AVERYLKDQ-Z X-LAVERYLKDQ-ZX-ILAVERYLKDQ-Z X-RILAVERYLKDQ-Z X-ARILAVERYLKDQ-Z X-QARILAVERYLKDQ-ZX-LQARILAVERYLKDQ-Z X-QLQARILAVERYLKDQ-Z X-KQLQARILAVERYLKDQ-ZX-IKQLQARILAVERYLKDQ-Z X-QIKQLQARILAVERYLKDQ-Z X-WQIKQLQARILAVERYLKDQ-ZX-VWQIKQLQARILAVERYLKDQ-Z X-TVWQIKQLQARILAVERYLKDQ-ZX-LTVWQIKQLQARILAVERYLKDQ-Z X-QLTVWQIKQLQARILAVERYLKDQ-ZX-LQLTVWQIKQLQARILAVERYLKDQ-Z X-LLQLTVWQIKQLQARILAVERYLKDQ-ZX-HLLQLTVWQIKQLQARILAVERYLKDQ-Z X-QHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-QQHLLQLTVWQIKQLQARILAVERYLKDQ-Z X-AQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-EAQQHLLQLTVWQIKQLQARILAVERYLKDQ-Z X-IEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-AIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-RAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-LRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-LLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-NLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ- (These amino acid sequencesare assigned SEQ ID Nos. 347-381 and 89, respectively). The one letteramino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl group; a macromolecular carriergroup including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP107-like peptides.“DP107-like”, as used herein, refers, first, to DP107 and DP107truncations which contain one or more amino acid substitutions,insertions and/or deletions. Second, “DP-107-like” refers to peptidesequences identified or recognized by the ALLMOTI5, 107×178×4 and PLZIPsearch motifs described herein, having structural and/or amino acidmotif similarity to DP107. The DP107-like peptides of the invention mayexhibit antifusogenic or antiviral activity, or may exhibit the abilityto modulate intracellular processes involving coiled-coil peptides.Further, such DP107-like peptides may possess additional advantageousfeatures, such as, for example, increased bioavailability, and/orstability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but thereexists a striking amino acid conservation within the DP107-correspondingregions of HIV-1 and HIV-2. The amino acid conservation is of a periodicnature, suggesting some conservation of structure and/or function.Therefore, one possible class of amino acid substitutions would includethose amino acid changes which are predicted to stabilize the structureof the DP107 peptides of the invention. Utilizing the DP107 and DP107analog sequences described herein, the skilled artisan can readilycompile DP107 consensus sequences and ascertain from these, conservedamino acid residues which would represent preferred amino acidsubstitutions.

The amino acid substitutions may be of a conserved or non-conservednature. Conserved amino acid substitutions consist of replacing one ormore amino acids of the DP107 (SEQ (SEQ ID NO. 89) peptide sequence withamino acids of similar charge, size, and/or hydrophobicitycharacteristics, such as, for example, a glutamic acid (E) to asparticacid (D) amino acid substitution. Non-conserved substitutions consist ofreplacing one or more amino acids of the DP107 (SEQ (SEQ ID NO. 89)peptide sequence with amino acids possessing dissimilar charge, size,and/or hydrophobicity characteristics, such as, for example, a glutamicacid (E) to valine (V) substitution.

Amino acid insertions may consist of single amino acid residues orstretches of residues. The insertions may be made at the carboxy oramino terminal end of the DP107 or DP107 truncated peptides, as well asat a position internal to the peptide. Such insertions will generallyrange from 2 to 15 amino acids in length. It is contemplated thatinsertions made at either the carboxy or amino terminus of the peptideof interest may be of a broader size range, with about 2 to about 50amino acids being preferred. One or more such insertions may beintroduced into DP107 (SEQ (SEQ ID NO. 89) or DP107 truncations, as longas such insertions result in peptides which may still be recognized bythe 107×178×4, ALLMOTI5 or PLZIP search motifs described herein, or may,alternatively, exhibit antifusogenic or antiviral activity, or exhibitthe ability to modulate intracellular processes involving coiled-coilpeptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging fromabout 2 to about 50 amino acid residues in length, corresponding to gp41protein regions either amino to or carboxy to the actual DP107 gp41amino acid sequence, respectively. Thus, a preferred amino terminal orcarboxy terminal amino acid insertion would contain gp41 amino acidsequences found immediately amino to or carboxy to the DP107 region ofthe gp41 protein.

Deletions of DP107 (SEQ (SEQ ID NO. 89) or DP178 truncations are alsowithin the scope of the invention. Such deletions consist of the removalof one or more amino acids from the DP107 or DP107-like peptidesequence, with the lower limit length of the resulting peptide sequencebeing 4 to 6 amino acids. Such deletions may involve a single contiguousor greater than one discrete portion of the peptide sequences. One ormore such deletions may be introduced into DP107 (SEQ (SEQ ID NO. 89) orDP107 truncations, as long as such deletions result in peptides whichmay still be recognized by the 107×178×4, ALLMOTI5 or PLZIP searchmotifs described herein, or may, alternatively, exhibit antifusogenic orantiviral activity, or exhibit the ability to modulate intracellularprocesses involving coiled-coil peptide structures.

DP107 and DP107 truncations are more fully described in Applicants'co-pending U.S. patent application Ser. No. 08/374,666, filed Jan. 27,1995, and which is incorporated herein by reference in its entirety.DP107 analogs are further described, below, in Section 5.3.

5.3. DP107 and DP178 Analogs

Peptides corresponding to analogs of the DP178, DP178 truncations, DP107and DP107 truncation sequences of the invention, described, above, inSections 5.1 and 5.2 may be found in other viruses, including, forexample, non-HIV-1_(LAI) enveloped viruses, non-enveloped viruses andother non-viral organisms.

The term “analog”, as used herein, refers to a peptide which isrecognized or identified via the 107×178×4, ALLMOTI5 and/or PLZIP searchstrategies discussed below. Further, such peptides may exhibitantifusogenic capability, antiviral activity, or the ability to modulateintracellular processes involving coiled-coil structures.

Such DP178 and DP107 analogs may, for example, correspond to peptidesequences present in TM proteins of enveloped viruses and may,additionally correspond to peptide sequences present in non envelopedand non-viral organisms. Such peptides may exhibit antifusogenicactivity, antiviral activity, most particularly antiviral activity whichis specific to the virus in which their native sequences are found, ormay exhibit an ability to modulate intracellular processes involvingcoiled-coil peptide structures.

DP178 analogs are peptides whose amino acid sequences are comprised ofthe amino acid sequences of peptide regions of, for example, other(i.e., other than HIV-1 LAI) viruses that correspond to the gp41 peptideregion from which DP178 (SEQ ID: 1) was derived. Such viruses mayinclude, but are not limited to, other HIV-1 isolates and HIV-2isolates. DP178 analogs derived from the corresponding gp41 peptideregion of other (i.e., non HIV-1LAI) HIV-1 isolates may include, forexample, peptide sequences as shown below.

NH₂-YTNTIYTLLEESQNQQEKNEQELLELDKWASLWNWF-COOH (DP-185; SEQ ID: 3);

NH₂-YTGIIYNLLEESQNQQEKNEQELLELDKWANLWNWF-COOH (SEQ ID: 4);

NH₂-YTSLIYSLLEKSQIQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID: 5).

SEQ ID:3 (DP-185), SEQ ID:4, and SEQ ID:5 are derived from HIV-1SF2,HIV-1RF, and HIV-1MN isolates, respectively. Underlined amino acidresidues refer to those residues that differ from the correspondingposition in the DP178 (SEQ ID:1) peptide. One such DP178 analog, DP-185(SEQ ID:3), is described in the Example presented in Section 6, below,where it is demonstrated that DP-185 (SEQ ID:3) exhibits antiviralactivity. The DP178 analogs of the invention may also includetruncations, as described above. Further, the analogs of the inventionmodifications such those described for DP178 analogs in Section 5.1.,above. It is preferred that the DP178 analogs of the invention representpeptides whose amino acid sequences correspond to the DP178 region ofthe gp41 protein, it is also contemplated that the peptides of theinvention may, additionally, include amino sequences, ranging from about2 to about 50 amino acid residues in length, corresponding to gp41protein regions either amino to or carboxy to the actual DP178 aminoacid sequence.

Striking similarities, as shown in FIG. 1, exist within the regions ofHIV-1 and HIV-2 isolates which correspond to the DP178 sequence. A DP178analog derived from the HIV-2_(NIHZ) isolate has the 36 amino acidsequence (reading from amino to carboxy terminus):

NH₂-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-COOH (SEQ ID:7)

Table III and Table IV show some possible truncations of theHIV-2_(NIHZ) DP178 analog, which may comprise peptides of between 3 and36 amino acid residues (i.e., peptides ranging in size from a tripeptideto a 36-mer polypeptide). Peptide sequences in these tables are listedfrom amino (left) to carboxy (right) terminus. “X” may represent anamino group (—NH₂) and “Z” may represent a carboxyl (—COOH) group.Alternatively, “X” may represent a hydrophobic group, including but notlimited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attachedmacromolecular group, including but not limited to a lipid-fatty acidconjugate, polyethylene glycol, carbohydrate or peptide group. Further,“Z” may represent an amido group; a T-butoxycarbonyl group; or acovalently attached macromolecular group, including but not limited to alipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptidegroup. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE III HIV-2_(NIHZ) DP178 analog carboxy truncations. X-LEA-ZX-LEAN-Z X-LEANI-Z X-LEANIS-Z X-LEANISQ-Z X-LEANISQS-Z X-LEANISQSL-ZX-LEANISQSLE-Z X-LEANISQSLEQ-Z X-LEANISQSLEQA-Z X-LEANISQSLEQAQ-ZX-LEANISQSLEQAQI-Z X-LEANISQSLEQAQIQ-Z X-LEANISQSLEQAQIQQ-ZX-LEANISQSLEQAQIQQE-Z X-LEANISQSLEQAQIQQEK-Z X-LEANISQSLEQAQIQQEKN-ZX-LEANISQSLEQAQIQQEKNM-Z X-LEANISQSLEQAQIQQEKNMY-ZX-LEANISQSLEQAQIQQEKNMYE-Z X-LEANISQSLEQAQIQQEKNMYEL-ZX-LEANISQSLEQAQIQQEKNMYELQ-Z X-LEANISQSLEQAQIQQEKNMYELQK-ZX-LEANISQSLEQAQIQQEKNMYELQKL-Z X-LEANISQSLEQAQIQQEKNMYELQKLN-ZX-LEANISQSLEQAQIQQEKNMYELQKLNS-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSW-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWD-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDV-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVF-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFT-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTN-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNW-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z (These amino acid sequences areassigned SEQ ID Nos. 382-414 and 7, respectively). The one letter aminoacid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IV HIV-2_(NIHZ) DP178 analog amino truncations. X-NWL-Z X-TNWL-ZX-FTNWL-Z X-VFTNWL-Z X-DVFTNWL-Z X-WDVFTNWL-Z X-SWDVFTNWL-ZX-NSWDVFTNWL-Z X-LNSWDVFTNWL-Z X-KLNSWDVFTNWL-Z X-QKLNSWDVFTNWL-ZX-LQKLNSWDVFTNWL-Z X-ELQKLNSWDVFTNWL-Z X-YELQKLNSWDVFTNWL-ZX-MYELQKLNSWDVFTNWL-Z X-NMYELQKLNSWDVFTNWL-Z X-KNMYELQKLNSWDVFTNWL-ZX-EKNMYELQKLNSWDVFTNWL-Z X-QEKNMYELQKLNSWDVFTNWL-ZX-QQEKNMYELQKLNSWDVFTNWL-Z X-IQQEKNMYELQKLNSWDVFTNWL-ZX-QIQQEKNMYELQKLNSWDVFTNWL-Z X-AQIQQEKNMYELQKLNSWDVFTNWL-ZX-QAQIQQEKNMYELQKLNSWDVFTNWL-Z X-EQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-LEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-SLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-QSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-SQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-ISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-NISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-ANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-EANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z (These amino acid sequences areassigned SEQ ID Nos. 246-278 and 1, respectively). The one letter ammoacid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

DP178 and DP107 analogs are recognized or identified, for example, byutilizing one or more of the 107×178×4, ALLMOTI5 or PLZIPcomputer-assisted search strategies described and demonstrated, below,in the Examples presented in Sections 9 through 16 and 19 through 25.The search strategy identifies additional peptide regions which arepredicted to have structural and/or amino acid sequence features similarto those of DP107 and/or DP178.

The search strategies are described fully, below, in the Examplepresented in Section 9. While this search strategy is based, in part, ona primary amino acid motif deduced from DP107 and DP178, it is not basedsolely on searching for primary amino acid sequence homologies, as suchprotein sequence homologies exist within, but not between major groupsof viruses. For example, primary amino acid sequence homology is highwithin the TM protein of different strains of HIV-1 or within the TMprotein of different isolates of simian immunodeficiency virus (SIV).Primary amino acid sequence homology between HIV-1 and SIV, however, islow enough so as not to be useful. It is not possible, therefore, tofind peptide regions similar to DP107 or DP178 within other viruses, orwithin non-viral organisms, whether structurally, or otherwise, based onprimary sequence homology, alone.

Further, while it would be potentially useful to identify primarysequence arrangements of amino acids based on, for example, the physicalchemical characteristics of different classes of amino acids rather thanbased on the specific amino acids themselves, such search strategieshave, until now, proven inadequate. For example, a computer algorithmdesigned by Lupas et al. to identify coiled-coil propensities of regionswithin proteins (Lupas, A., et al., 1991 Science 252:1162-1164) isinadequate for identifying protein regions analogous to DP107 or DP178.

Specifically, analysis of HIV-1 gp160 (containing both gp120 and gp41)using the Lupas algorithm does not identify the coiled-coil regionwithin DP107. It does, however, identify a region within DP178 beginningeight amino acids N-terminal to the start of DP178 and ending eightamino acids from the C-terminus. The DP107 peptide has been shownexperimentally to form a stable coiled coil. A search based on the Lupassearch algorithm, therefore, would not have identified the DP107coiled-coil region. Conversely, the Lupas algorithm identified the DP178region as a potential coiled-coil motif. However, the peptide derivedfrom the DP178 region failed to form a coiled coil in solution.

A possible explanation for the inability of the Lupas search algorithmto accurately identify coiled-coil sequences within the HIV-1 TM, isthat the Lupas algorithm is based on the structure of coiled coils fromproteins that are not structurally or functionally similar to the TMproteins of viruses, antiviral peptides (e.g. DP107 and DP178) of whichare an object of this invention.

The computer search strategy of the invention, as demonstrated in theExamples presented below, in Sections 9 through 16 and 19 through 25,successfully identifies regions of proteins similar to DP107 or DP178.This search strategy was designed to be used with acommercially-available sequence database package, preferably PC/Gene.

A series of search motifs, the 107×178×4, ALLMOTI5 and PLZIP motifs,were designed and engineered to range in stringency from strict tobroad, as discussed in this Section and in Section 9, with 107×178×4being preferred. The sequences identified via such search motifs, suchas those listed in Tables V-XIV, below, potentially exhibitantifusogenic, such as antiviral, activity, may additionally be usefulin the identification of antifusogenic, such as antiviral, compounds,and are intended to be within the scope of the invention.

Coiled-coiled sequences are thought to consist of heptad amino acidrepeats. For ease of description, the amino acid positions within theheptad repeats are sometimes referred to as A through G, with the firstposition being A, the second B, etc. The motifs used to identifyDP107-like and DP178-like sequences herein are designed to specificallysearch for and identify such heptad repeats. In the descriptions of eachof the motifs described, below, amino acids enclosed by brackets, i.e.,[ ], designate the only amino acid residues that are acceptable at thegiven position, while amino acids enclosed by braces, i.e., { },designate the only amino acids which are unacceptable at the givenheptad position. When a set of bracketed or braced amino acids isfollowed by a number in parentheses i.e., ( ), it refers to the numberof subsequent amino acid positions for which the designated set of aminoacids hold, e.g, a (2) means “for the next two heptad amino acidpositions”.

The ALLMOTI5 is written as follows:

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

Translating this motif, it would read: “at the first (A) position of theheptad, any amino acid residue except C, D, G, H, or P is acceptable, atthe next two (B,C) amino acid positions, any amino acid residue exceptC, F, or P is acceptable, at the fourth heptad position (D), any aminoacid residue except C, D, G, H, or P is acceptable, at the next three(E, F, G) amino acid positions, any amino acid residue except C, F, or Pis acceptable. This motif is designed to search for five consecutiveheptad repeats (thus the repeat of the first line five times), meaningthat it searches for 35-mer sized peptides. It may also be designed tosearch for 28-mers, by only repeating the initial motif four times. Withrespect to the ALLMOTI5 motif, a 35-mer search is preferred. Those viral(non-bacteriophage) sequences identified via such an ALLMOTI5 motif arelisted in Table V, below, at the end of this Section. The viralsequences listed in Table V potentially exhibit antiviral activity, maybe useful in the identification of antiviral compounds, and are intendedto be within the scope of the invention. In those instances wherein asingle gene exhibits greater than one sequence recognized by theALLMOTI5 search motif, the amino acid residue numbers of these sequencesare listed under “Area 2”, Area 3”, etc. This convention is used foreach of the Tables listed, below, at the end of this Section.

The 107×178×4 motif is written as follows:

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

Translating this motif, it would read: “at the first (A) position of theheptad, only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y isacceptable, at the next two (B,C) amino acid positions, any amino acidresidue except C, F, M or P is acceptable, at the fourth position (D),only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y isacceptable, at the next three (E, F, G) amino acid positions, any aminoacid residue except C, F, M or P is acceptable. This motif is designedto search for four consecutive heptad repeats (thus the repeat of thefirst line four times), meaning that it searches for 28-mer sizedpeptides. It may also be designed to search for 35-mers, by repeatingthe initial motif five times. With respect to the 107×178×4 motif, a28-mer search is preferred.

Those viral (non-bacteriophage) sequences identified via such a107×178×4 motif are listed in Table VI, below, at the end of thisSection, with those viral (non-bacteriophage) sequences listed in TableVII, below at the end of this Section, being preferred.

The 107×178×4 search motif was also utilized to identify non-viralprocaryotic protein sequences, as listed in Table VIII, below, at theend of this Section. Further, this search motif was used to reveal anumber of human proteins. The results of this human protein 107×178×4search is listed in Table IX, below, at the end of this Section. Thesequences listed in Tables VIII and IX, therefore, reveal peptides whichmay be useful as antifusogenic compounds or in the identification ofantifusogenic compounds, and are intended to be within the scope of theinvention.

The PLZIP series of motifs are as listed in FIG. 19. These motifs aredesigned to identify leucine zipper coiled-coil like heptads wherein atleast one proline residue is present at some predefined distanceN-terminal to the repeat. These PLZIP motifs find regions of proteinswith similarities to HIV-1 DP178 generally located just N-terminal tothe transmembrane anchor. These motifs may be translated according tothe same convention described above. Each line depicted in FIG. 19represents a single, complete search motif. “X” in these motifs refersto any amino acid residue. In instances wherein a motif contains twonumbers within parentheses, this refers to a variable number of aminoacid residues. For example, X (1,12) is translated to “the next one totwelve amino acid residues, inclusive, may be any amino acid”.

Tables X through XIV, below, at the end of this Section, list sequencesidentified via searches conducted with such PLZIP motifs. Specifically,Table X lists viral sequences identified via PCTLZIP, P1CTLZIP andP2CTLZIP search motifs, Table XI lists viral sequences identified viaP3CTLZIP, P4CTLZIP, P5CTLZIP and P6CTLZIP search motifs, Table XII listsviral sequences identified via P7CTLZIP, P8CTLZIP and P9CTLZIP searchmotifs, Table XIII lists viral sequences identified via P12LZIPCsearches and Table XIV lists viral sequences identified via P23TLZIPCsearch motifs The viral sequences listed in these tables representpeptides which potentially exhibit antiviral activity, may be useful inthe identification of antiviral compounds, and are intended to be withinthe scope of the invention.

The Examples presented in Sections 17, 18, 26 and 27 below, demonstratethat viral sequences identified via the motif searches described hereinidentify substantial antiviral characteristics. Specifically, theExample presented in Section 17 describes peptides with anti-respiratorysyncytial virus activity, the Example presented in Section 18 describespeptides with anti-parainfluenza virus activity, the Example presentedin Section 26 describes peptides with anti-measles virus activity andthe Example presented in Section 27 describes peptides with anti-simianimmunodeficiency virus activity.

The DP107 and DP178 analogs may, further, contain any of the additionalgroups described for DP178, above, in Section 5.1. For example, thesepeptides may include any of the additional amino-terminal groups asdescribed above for “X” groups, and may also include any of thecarboxy-terminal groups as described, above, for “Z” groups.

Additionally, truncations of the identified DP107 and DP178 peptides areamong the peptides of the invention. Further, such DP107 and DP178analogs and DP107/DP178 analog truncations may exhibit one or more aminoacid substitutions, insertion, and/or deletions. The DP178 analog aminoacid substitutions, insertions and deletions, are as described, above,for DP178-like peptides in Section 5.1. The DP-107 analog amino acidsubstitutions, insertions and deletions are also as described, above,for DP107-like peptides in Section 5.2.

Tables XV through XXII, below, present representative examples of suchDP107/DP178 truncations. Specifically, Table XV presents RespiratorySyncytial Virus F1 region DP107 analog carboxy truncations, Table XVIpresents Respiratory Syncytial Virus F1 region DP107 analog aminotruncations, Table XVII presents Respiratory Syncytial Virus F1 regionDP178 analog carboxy truncations, Table XVIII presents RespiratorySyncytial Virus F1 region DP178 analog amino truncations, Table XIXpresents Human Parainfluenza Virus 3 F1 region DP178 analog carboxytruncations, Table XX presents Human Parainfluenza Virus 3 μl regionDP178 analog amino truncations, Table XXI presents Human ParainfluenzaVirus 3 μl region DP107 analog carboxy truncations and Table XXIIpresents Human Parainfluenza Virus 3 μl region DP107 analog aminotruncations. Further, Table XXIII, below, presents DP107/DP178 analogsand analog truncations which exhibit substantial antiviral activity.These antiviral peptides are grouped according to the specific viruswhich they inhibit, including respiratory syncytial virus, humanparainfluenza virus 3, simian immunodeficiency virus and measles virus.

TABLE V ALLMOTI5 SEARCH RESULTS SUMMARY FOR ALL VIRAL(NON-BACTERIOPHAGE) PROTEINS ALL VIRUSES (NO PCGENE ALLMOTI5BACTERIOPHAGES) AREA AREA AREA AREA AREA AREA AREA AREA FILE NAMEPROTEIN VIRUS 1 2 3 4 5 6 7 8 P170K_TRVPS POTENTIAL 170 TOBACCO RATTLEVIRUS 113– KD PROTEIN (STRAIN PSG) 153 P194K_TRVSY POTENTIAL 194 TOBACCORATTLE VIRUS 144– 214– 391– 644– 1045– 1115– 1335– 1635– KD PROTEIN(STRAIN SYM 178 245 446 678 1079 1176 1376 1646 P55KD_HSV6U 55 8 KDPROTEIN HERPES SIMPLEX VIRUS 228– (TYPE 6 / STRAIN 262 UGANDA-1102)PAANT_HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS  3– 100– (ISOLATEAMERICAN) 48 144 PAANT_HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS  7–100– (ISOLATE D380) 48 144 PAANT_HDVTT DELTA ANTIGEN HEPATITIS DELTAVIRUS  3– 100– (ALPHA ANTIGEN) (ISOLATE ITALIAN) 48 144 PAANT_HDVL1DELTA ANTIGEN HEPATITIS DELTA VIRUS  3– (ISOLATE LEBANON-1) 48PAANT_HDVM1 DELTA ANTIGEN HEPATITIS DELTA VIRUS  3– 100– (ISOLATEJAPANESE M-1) 48 144 PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS  3–100– (ISOLATE JAPANESE M-2) 48 144 PAANT_HDVNA DELTA ANTIGEN HEPATITISDELTA VIRUS  3– 100– (ISOLATE NAURU) 48 144 PAANT_HDVS1 DELTA ANTIGENHEPATITIS DELTA VIRUS  1– 100– (ISOLATE JAPANESE S-1) 49 144 PAANT_HDVS2DELTA ANTIGEN HEPATITIS DELTA VIRUS  1– 100– (ISOLATE JAPANESE S-2) 49144 PAANT_HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS  3– 100– (ISOLATEWOODCHUCK) 48 144 PAT3H_FOWPM ANTITHROMBIN-III FOWLPOX VIRUS (ISOLATE 71– HOMOLOG HP-438) 110 PAT11_VACCV 94 KD A-TYPE VACCINIA VIRUS  14–420– 570– INCLUSION (STRAIN WR) 57 564 625 PROTEIN PAT11_VARV 81 KDA-TYPE VARIOLA VIRUS 425– 531– 571– INCLUSION 525 565 628 PROTEINPAT12_HSV11 ALPHA TRANS- HERPES SIMPLEX VIRUS 304– INDUCING (TYPE 1) 345FACTOR PAT12_HSV1F ALPHA TRANS- HERPES SIMPLEX VIRUS 102– 304– INDUCING(TYPE 1) 139 345 FACTOR PAT12_HSVEB ALPHA TRANS- EQUINE HERPES VIRUS101– 268– INDUCING TYPE 1 (STRAIN AB4P) 147 331 FACTOR PAT12_VACCCPUTATIVE A-TYPE VACCINIA VIRUS (STRAIN  79– 219– INCLUSION COPENHAGEN)124 263 PROTEIN PAT12_VACCV PUTATIVE A-TYPE VACCINIA VIRUS  79–INCLUSION 124 PROTEIN PAT12_VZVD ALPHA TRANS- VARICELLA-ZOSTER VIRUS298– 395– INDUCING (STRAIN DUMAS) 361 429 FACTOR PAT13_VACCV PUTATIVEA-TYPE VACCINIA VIRUS  51– INCLUSION 95 PROTEIN PAT1N_HSV23 ALPHA TRANS-HERPES SIMPLEX VIRUS 178– 324– INDUCING (TYPE 2) 219 381 PROTEIN (VMW65)PAT1N_HSV2H ALPHA TRANS- HERPES SIMPLEX VIRUS 177– 324– INDUCING (TYPE2) 222 381 PROTEIN (VMW65) PAT1N_HSVBP ALPHA TRANS- BOVINE HERPES VIRUS195– INDUCING TYPE 1 256 PROTEIN PAT1N_HSVEB ALPHA TRANS- EQUINE HERPESVIRUS 241– INDUCING TYPE 1 289 PROTEIN PAT1N_VZVD ALPHA TRANS-VARICELLA-ZOSTER VIRUS 206– INDUCING (STRAIN DUMAS) 252 PROTEIN (PAT1_COWPX A-TYPE INCLUSION COWPOX VIRUS  14– 426– 532– 572–  803– 1106–PROTEIN 57 526 566 629 989 1150 PBDL2_EBV PROTEIN BDLF2 EPSTEIN-BARRVIRUS  90– (STRAIN B95-8) 131 PBRL1_EBV TRANSCRIPTION EPSTEIN-BARR VIRUS150– ACTIVATOR BRLF1 (STRAIN B95-8) 187 PCOA1_POVBA COAT POLYOMA VIRUSBK 107– PROTEIN VP1 141 PCOA1_POVBK COAT POLYOMA VIRUS BK 107– PROTEINVP1 141 PCOA1_POVHA COAT HAMSTER POLYOMA VIRUS 159– PROTEIN VP1 195PCOA1_SV40 COAT SIMIAN VIRUS 40 109– PROTEIN VP1 143 PCOA2_BFDV COATBUDGERIGAR FLEDGLING 141– PROTEIN VP2 DISEASE VIRUS 213 PCOA2_POVBA COATPOLYOMA VIRUS BK  14– 317– PROTEIN VP2 (STRAIN AS) 64 351 PCOA2_POVBKCOAT POLYOMA VIRUS BK  14– 317– PROTEIN VP2 64 351 PCOA2_POVBO COATBOVINE POLYOMA VIRUS  35– 153– PROTEIN VP2 76 216 PCOA2_POVHA COATHAMSTER POLYOMA VIRUS  7– 174– PROTEIN VP2 48 208 PCOA2_POVJC CO ATPOLYOMA VIRUS JC  14– 233– PROTEIN VP2 64 267 PCOA2_POVLY COATLYMPHOTROPIC POLYOMA  14– 156– PROTEIN VP2 VIRUS 78 206 PCOA2_POVM3 COATMOUSE POLYOMA VIRUS  5– 137– PROTEIN VP2 (STRAIN 3) 72 185 PCOA2_POVMACOAT MOUSE POLYOMA VIRUS  5– 137– PROTEIN VP2 72 185 PCOA2_POVMC COATMOUSE POLYOMA VIRUS  5– 137– PROTEIN VP2 72 185 PCOA2_POVMX COAT MOUSEPOLYOMA VIRUS  15– 177– PROTEIN VP2 56 211 PCOA2_SV40 COAT SIMIAN VIRUS40  14– 228– 318– PROTEIN VP2 62 262 352 PCOAT_ABMVW COAT PROTEINABUTILON MOSAIC VIRUS 180– (ISOLATE WEST INDIA 214 PCOAT_ACLSV COATPROTEIN APPLE CHLOROTIC LEAF 154– SPOT VIRUS 188 PCOAT_AEDEV COAT AEDESDENSONUCLEOSIS 243– PROTEIN VP1 VIRUS 284 PCOAT_AMCV COAT PROTEINARTICHOKE MOTTLED  36– 100– CRINKLE VIRUS 70 134 PCOAT_BLRV COAT PROTEINBEAN LEAFROLL VIRUS  89– 123 PCOAT_SMWLM COAT PROTEIN SATELLITE MAIZEWHITE  66– LINE MOSAIC VIRUS 100 PCOAT_SOCMV COAT PROTEIN SOYBEANCHLOROTIC 129– MOTTLE VIRUS 166 PCOAT_STNV1 COAT PROTEIN SATELLITETOBACCO  2– NECROSIS VIRUS 1 50 PCOAT_STNV2 COAT PROTEIN SATELLITETOBACCO  38– NECROSIS VIRUS 2 72 PCOAT_TAMV GENOME TAMARILLO MOSAICVIRUS  7– POLYPROTEIN 55 PCOAT_TAV COAT PROTEIN TOMATO ASPERMY VIRUS 14– 48 PCOAT_TBSVB COAT PROTEIN TOMATO BUSHY STUNT  1–  43– VIRUS 37 77PCOAT_TBSVC COAT PROTEIN TOMATO BUSHY STUNT  44– 100– VIRUS 78 134PCOAT_TCV COAT PROTEIN TURNIP CRINKLE VIRUS  12– 46 PCOAT_TGMV COATPROTEIN TOMATO GOLDEN MOSAIC 186– VIRUS 220 PCOAT_TMGMV COAT PROTEINTOBACCO MILD GREEN 103– MOSAIC VIRUS 137 PCOAT_TMV COAT PROTEIN TOBACCOMOSAIC VIRUS 103– 137 PCOAT_TMV06 COAT PROTEIN TOBACCO MOSAIC VIRUS 103–137 PCOAT_TMVCO COAT PROTEIN TOBACCO MOSAIC VIRUS  76– 138 PCOAT_TMVDACOAT PROTEIN TOBACCO MOSAIC VIRUS 103– 137 PCOAT_TMVER COAT PROTEINTOBACCO MOSAIC VIRUS 103– 137 PCOAT_TMVHR COAT PROTEIN TOBACCO MOSAICVIRUS 103– 137 PCOAT_TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS 103– 137PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS 103– 137 PCOAT_TMVTO COATPROTEIN TOBACCO MOSAIC VIRUS 103– 137 PCOAT_TRVCA COAT PROTEIN TOBACCORATTLE VIRUS  71– 109 PCOAT_TRVTC COAT PROTEIN TOBACCO RATTLE VIRUS  69–103 PCOAT_TYDVA COAT PROTEIN TOBACCO YELLOW DWARF  2– VIRUS 36PCOAT_TYMV COAT PROTEIN TURNIP YELLOW MOSAIC  41– VIRUS 75 PCOAT_TYMVACOAT PROTEIN TURNIP YELLOW MOSAIC  41– VIRUS 75 PCOAT_WCMVO COAT PROTEINWHITE CLOVER MOSAIC 163– VIRUS 197 PCORA_HPBGS CORE ANTIGEN GROUNDSQUIRREL  94– HEPATITIS VIRUS 135 PCORA_HPBV9 CORE ANTIGEN HEPATITIS BVIRUS 111– 149 PCORA_WHV1 CORE ANTIGEN WOODCHUCK HEPATITIS  62– VIRUS 1106 PCORA_WHV3 CORE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8  62– 106PD250_ASFB7 PROTEIN D250R AFRICAN SWINE FEVER VIRUS 198– 232 PDNB2_ADE02EARLY E2A DNA- HUMAN ADENOVIRUS TYPE 2 291– BINDING 336 PROTEINPDNB2_ADE05 EARLY E2A DNA- HUMAN ADENOVIRUS TYPE 5 291– BINDING 336PROTEIN PDNB1_EBV MAJOR DNA- EPSTEIN-BARR VIRUS 215– 718– 974– 1027– BINDING 252 752 1009 1068 PROTEIN PDNB1_HCMVA MAJOR DNA- HUMANCYTOMEGALOVIRUS 338– 1013–  BINDING 372 1070 PROTEIN PDNB1_HSV11 MAJORDNA- HERPES SIMPLEX VIRUS 557– 599– 769.JO) 1079–  BINDING 595 640 1140PROTEIN PDNB1_HSV1F MAJOR DNA- HERPES SIMPLEX VIRUS 557– 599– 769–1079–  BINDING 595 640 803 1140 PROTEIN PDNB1_HSV1K MAJOR DNA- HERPESSIMPLEX VIRUS 557– 599– 769– 1079–  BINDING 595 640 803 1140 PROTEINPDNB1_HSVB2 MAJOR DNA- BOVINE HERPES VIRUS TYPE 2 552– 599– 1048– BINDING 591 633 1131 PROTEIN PDNB1_HSVE1 MAJOR DNA- EQUINE HERPES VIRUSTYPE 1 273– 1 BINDING 314 PROTEIN PDNB1_HSVEB MAJOR DNA- EQUINE HERPESVIRUS TYPE 1 617– 1107–  BINDING 658 1148 PROTEIN PDNB1_HSVSA MAJOR DNA-HERPES VIRUS SAIMIRI 222– 330– 506– 873– BINDING 259 367 557 907 PROTEINPDNB1_MCMVS MAJOR DNA- MURINE CYTOMEGALOVIRUS 584– 987– BINDING 618 1125PROTEIN PDNB1_SCMVC MAJOR DNA- SIMIAN CYTOMEGALOSVIRUS 525– BINDING 562PROTEIN PDNB1_VZVD MAJOR DNA- VARICELLA-ZOSTER VIRUS 613– 1043–  BINDING650 1077 PROTEIN PDNL1_ASFM2 DNA LIGASE AFRICAN SWINE FEVER VIRUS  72–106 PDNL1_VACCC DNA LIGASE VACCINIA VIRUS 395– 436 PDNL1_VACCV DNALIGASE VACCINIA VIRUS 395– 436 PDNL1_VARV DNA LIGASE VARIOLA VIRUS 395–436 PDPOL_ADE02 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 2 667– 743PDPOL_ADE05 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 5 667– 743 PDPOL_ADE07DNA POLYMERASE HUMAN ADENOVIRUS TYPE 7 733– 809 PDPOL_ADE12 DNAPOLYMERASE HUMAN ADENOVIRUS TYPE 12 665–741 PDPOL_CBEPV DNA POLYMERASECHORISTONEURA BIENNIS  23– 102– ENTOMOPOXVIRUS 64 240 PDPOL_CHVN2 DNAPOLYMERASE CHLORELLA VIRUS NY-2A 247– 284 PDPOL_CHVP1 DNA POLYMERASEPARAMECIUM BURSARIA 247– CHLORELLA VIRUS 1 284 PDPOL_FOWPV DNAPOLYMERASE FOWLPOX VIRUS  17–  80– 371– 51 114 412 PDPOL_HCMVA DNAPOLYMERASE HUMAN CYTOMEGALOVIRUS 753– 1033–  (STRAIN AD169) 787 1074PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS  5– 39 PDPOL_HPBDC DNAPOLYMERASE DUCK HEPATITIS B VIRUS  5– (STRAIN CHINA) 39 PDPOL_HPBDW DNAPOLYMERASE DUCK HEPATITIS B VIRUS (WHITE  5– 297– SHANGHAI DUCK ISOLATES3 39 338 PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS 291–VIRUS 325 PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS  5– 224–557– 39 265 595 PDPOL_HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE201– AYW) 235 PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 201–ADYW) 235 PDPOL_HSV11 DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 511– 1 /STRAIN 17) 559 PDPOL_HSV1A DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE511– 1 STRAIN ANGELOTTI 559 PDPOL_HSV1K DNA POLYMERASE HERPES SIMPLEXVIRUS (TYPE 511– 1 / STRAIN KOS) 559 PDPOL_HSV1S DNA POLYMERASE HERPESSIMPLEX VIRUS (TYPE 511– 1 / STRAIN SC16) 559 PDPOL_HSV21 DNA POLYMERASEHERPES SIMPLEX VIRUS (TYPE 512– 2 / STRAIN 186) 560 PDPOL_HSVEB DNAPOLYMERASE EQUINE HERPES VIRUS TYPE 1 494– (STRAIN AB4P) 528 PDPOL_HSV11DNA POLYMERASE ICTALURID HERPES VIRUS 1  33– 328– 401– 706–  808–(CHANNEL CATFISH VIRUS) 67 366 435 749 858 PDPOL_NPVAC DNA POLYMERASEAUTOGRAPHA CALIFORNICA 595– NUCLEAR POLYHEDROSIS VIRUS 646 PDPOL_VACCCDNA POLYMERASE VACCINIA VIRUS (STRAIN 627– 770– 828– COPENHAGEN) 683 818862 PDPOL_VACCV DNA POLYMERASE VACCINIA VIRUS 627– 770– 828– (STRAIN WR)683 818 862 PDPOL_VARV DNA POLYMERASE VARIOLA VIRUS 626– 769– 827– 682817 861 PDPOL_VZVD DNA POLYMERASE VARICELLA-ZOSTER VIRUS 473– (STRAINDUMAS) 533 PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 1 285–326 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59 290– 331PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 290– 331PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 289– 330PDPOL_WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 290– (INFECTIOUSCLONE) 331 PDPOM_HPBVY DNA POLYMERASE HEPATITIS B VIRUS 201– (SUBTYPEAYW) 235 PDUT_HSVEB DEOXYURIDINE 5′- EQUINE HERPES VIRUS TYPE 1 135–TRIPHOSPHATE (STRAIN AB4P 169 NUCLEOTIDOHY PDUT_HSVSA DEOXYURIDINE 5′-HERPES VIRUS SAIMIRI 179– TRIPHOSPHATE (STRAIN 11) 223 NUCLEOTIDOHYPEIA_ADE41 EARLY E1A 27 HUMAN ADENOVIRUS TYPE 41 107– KD PROTEIN 141PE1BL_ADE40 E1B PROTEIN, HUMAN ADENOVIRUS TYPE 40 102– LARGE 166T-ANTIGEN PE1BS_ADE02 E1B PROTEIN, HUMAN ADENOVIRUS TYPE 2 103– SMALL137 T-ANTIGEN PE1BS_ADE05 E1B PROTEIN, HUMAN ADENOVIRUS TYPE 5 103–SMALL 137 T-ANTIGEN PE1BS_ADE12 E1B PROTEIN, HUMAN ADENOVIRUS TYPE 12 96– SMALL 131 T-ANTIGEN PE1BS_ADE40 E1B PROTEIN, HUMAN ADENOVIRUS TYPE40 100– SMALL 134 T-ANTIGEN PE1BS_ADE41 E1B PROTEIN, HUMAN ADENOVIRUSTYPE 41 100– SMALL 134 T-ANTIGEN PE1BS_ADEM1 E1B PROTEIN, MOUSEADENOVIRUS TYPE 1 119– SMALL 173 T-ANTIGEN PE314_ADE02 EARLY E3B 14HUMAN ADENOVIRUS TYPE 2  2– KD PROTEIN 39 PE314_ADE03 EARLY E3 15.3HUMAN ADENOVIRUS TYPE 3  8– KD PROTEIN 49 PE314_ADE05 EARLY E3 14.5HUMAN ADENOVIRUS TYPE 5  2– KD PROTEIN 39 PE314_ADE07 EARLY E3 15.3HUMAN ADENOVIRUS TYPE 7  7– KD PROTEIN 48 PE320_ADE35 EARLY E3 20.3HUMAN ADENOVIRUS TYPE 35  70– KD GLYCOPROTEIN 107 PE321_ADE35 EARLY E320.6 HUMAN ADENOVIRUS TYPE 35 125– KD GLYCOPROTEIN 169 PE411_ADE02PROBABLE EARLY HUMAN ADENOVIRUS TYPE 2  10– E4 11 KD 44 PROTEINPE411_ADE05 PROBABLE EARLY HUMAN ADENOVIRUS TYPE 5  10– E4 11 KD 44PROTEIN PEAR_EBV EARLY ANTIGEN EPSTEIN-BARR VIRUS 123– PROTEIN R (STRAIN157 B95-8) PEBN4_EBV EBNA-4 NUCLEAR EPSTEIN-BARR VIRUS 487– PROTEIN(STRAIN 521 B95-8) PEFT1_VARV EARLY VARIOLA VIRUS  23– 307–TRANSCRIPTION 71 341 FACTOR 70 KD SUBUNIT PENV1_FRSFV ENV POLYPROTEINFRIEND SPLEEN FOCUS-FORMING 341– PRECURSOR VIRUS 375 PENV2_FRSFV ENVPOLYPROTEIN FRIEND SPLEEN FOCUS-FORMING 341– PRECURSOR VIRUS 378PENV_AVIRE ENV POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS 420– VIRUS 472PENV_AVISN ENV POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 426– 478PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS 390– (STRAIN M7) 456PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY  10–  88– 221– 530– 635– PRECURSOR VIRUS (ISOLATE 106) 44 122 255 610 691 PENV_BIV27 ENVPOLYPROTEIN BOVINE IMMUNODEFICIENCY  10–  88– 159– 250–  559–  664–PRECURSOR VIRUS (ISOLATE 127) 44 122 193 284 639 724 PENV_BLVAF ENVPOLYPROTEIN BOVINE LEUKEMIA VIRUS 304– (AMERICAN ISOLATE FLK) 379PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304– (AUSTRALIANISOLATE) 379 PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304–(AMERICAN ISOLATE VDM) 379 PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIAVIRUS 304– (BELGIUM ISOLATE LR285) 379 PENV_BLVB5 ENV POLYPROTEIN BOVINELEUKEMIA VIRUS 304– (BELGIUM ISOLATE LB59) 379 PENV_BLV1 ENV POLYPROTEINBOVINE LEUKEMIA VIRUS 304– (JAPANESE ISOLATE B1.V-1) 379 PENV_CAEVC ENVPOLYPROTEIN CAPRINE ARTHRITIS 157– 615– 751– 847– PRECURSOR ENCEPHALITISVIRUS 196 72O 785 895 (STRAIN CORK) PENV_CAEVG ENV POLYPROTEIN CAPRINEARTHRITIS 154– 613– 749– 845– PRECURSOR ENCEPHALITIS VIRUS 193 718 783893 (STRAIN G63) PENV_EIAV1 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA 39– 436– 559– 668– PRECURSOR VIRUS (CLONE P3.2-1) 76 525 593 716PENV_EIAV2 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA  39– 436– 559– 658–PRECURSOR VIRUS (CLONE P3.2-2) 76 525 593 692 PENV_EIAV3 ENV POLYPROTEINEQUINE INFECTIOUS ANEMIA  39– 436– 559– 658– PRECURSOR VIRUS (CLONEP3.2-3) 76 525 593 716 PENV_EIAV5 ENV POLYPROTEIN EQUINE INFECTIOUSANEMIA  38– 437– 560– 659– PRECURSOR VIRUS (CLONE P3.2-5) 76 526 594 693PENV_EIAV9 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA  39– 436– 559– 658–PRECURSOR VIRUS (CLONE 1369) 76 525 593 716 PENV_EIAVC ENV POLYPROTEINEQUINE INFECTIOUS ANEMIA  39– 436– 559– 658– PRECURSOR VIRUS (CLONECL22) 76 525 593 716 PENV_EIAVW ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA 39– 436– 559– 658– PRECURSOR VIRUS (STRAIN WSU5) 76 525 593 716PENV_EIAVY ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA  39– 436– 559– 658–PRECURSOR VIRUS (ISOLATE WYOMING) 76 525 593 716 PENV_FENV1 ENVPOLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 503– 567– PRECURSOR 555 604PENV_FIVPE ENVELOPE FELINE IMMUNODEFICIENCY 610– 715– POLYPROTEIN VIRUS(ISOLATE PETALUMA) 690 756 PRECURSOR PENV_FIVSD ENVELOPE FELINEIMMUNODEFICIENCY 601– 713– POLYPROTEIN VIRUS (ISOLATE SAN DIEGO) 688 754PRECURSOR PENV_FIVT2 ENVELOPE FELINE IMMUNODEFICIENCY  60– 609– 714–POLYPROTEIN VIRUS (ISOLATE TM2) 122 689 755 PRECURSOR PENV_FLVC6 ENVPOLYPROTEIN FELINE LEUKEMIA PROVIRUS 497– 561– PRECURSOR (CLONE CFE-6)549 595 PENV_FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 478– 542–PRECURSOR (STRAIN A/GLASGOW-1) 530 576 PENV_FLVLB ENV POLYPROTEIN FELINELEUKEMIA VIRUS 498– 562– PRECURSOR (STRAIN LAMBDA-B1) 550 596 PENV_FLVSAENV POLYPROTEIN FELINE LEUKEMIA VIRUS 475– 539– PRECURSOR (STRAIN SARMA)527 573 PENV_FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS  1– 154– 321–563–  866– 41 205 355 693 903 PENV_FSVGA ENV POLYPROTEIN FELINE SARCOMAVIRUS 498– 562– PRECURSOR (STRAIN GARDNER-ARNSTEIN) 550 596 PENV_FSVGBENV POLYPROTEIN FELINE SARCOMA VIRUS 478– 542– PRECURSOR (STRAIN GA) 530576 PENV_FSVSM ENV POLYPROTEIN FELINE SARCOMA VIRUS 481-524 545–PRECURSOR (STRAIN SM) 579 PENV_FSVST ENV POLYPROTEIN FELINE SARCOMAVIRUS 498– PRECURSOR (STRAIN SNYDER-THEILEN) 532 PENV_GALV ENVPOLYPROTEIN GIBBON APE LEUKEMIA VIRUS 523– 587– PRECURSOR 575 621PENV_HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 321– TYPE 1(STRAIN ATK) 383 PENV_HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS316– TYPE I (CARIBBEAN ISOLATE 383 PENV_HTL1M ENV POLYPROTEIN HUMANT-CELL LEUKEMIA VIRUS 321– TYPE I (ISOLATE MT-2) 383 PENV_HTLV2 ENVPOLYPROTEIN HUMAN T-CELL LEUKEMIA 317– PRECURSOR VIRUS TYPE II 377PENV_HV1A2 ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS 497– 612– 766–POLYPROTEIN TYPE 1 (ARV2/SF2 ISOLATE 593 711 845 GP160 PRECURSORPENV_HV1B1 ENVELOPE HUMAN IMMUNODEFICIENCY 505– 610– 767– POLYPROTEINVIRUS TYPE 1 (BH10 ISOLATE) 594 712 843 GP160 PRECURSOR PENV_HV1B8ENVELOPE HUMAN IMMUNODEFICIENCY 500– 605.707 762– POLYPROTEIN VIRUS TYPE1 (BH8 ISOLATE) 589 838 GP160 PRECURSOR PENV_HV1BN ENVELOPE HUMANIMMUNODEFICIENCY VIRUS 331– 501– 609– 763– POLYPROTEIN TYPE 1 (BRAINISOLATE) 365 590 708 831 GP160 PRECURSOR (CONT PENV_HV1BR ENVELOPE HUMANIMMUNODEFICIENCY 510– 615– 772– POLYPROTEIN VIRUS TYPE 1 (BRU ISOLATE)599 717 841 GP160 PRECURSOR PENV_HV1C4 ENVELOPE HUMAN IMMUNODEFICIENCYVIRUS 342– 510– 626– 779– POLYPROTEIN TYPE 1 (CDC-451 ISOLATE) 376 606724 855 GP160 PRECURSOR PENV_HV1EL ENVELOPE HUMAN IMMUNODEFICIENCY 255–502– 607– 768– POLYPROTEIN VIRUS TYPE 1 (ELI ISOLATE) 296 591 709 829GP160 PRECURSOR PENV_HV1H2 ENVELOPE HUMAN IMMUNODEFICIENCY 505– 610–767.836 POLYPROTEIN VIRUS TYPE 1 (HXB2 ISOLATE) 594 712 GP160 PRECURSORPENV_HV1H3 ENVELOPE HUMAN IMMUNODEFICIENCY 505– 610– 767– POLYPROTEINVIRUS TYPE 1 (HXB3 ISOLATE) 594 712 843 GP160 PRECURSOR PENV_HV1J3ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS 343– 517– 622– 778– POLYPROTEINTYPE 1 (JH3 ISOLATE) 377 605 723 843 GP160 PRECURSOR PENV_HV1JR ENVELOPEHUMAN IMMUNODEFICIENCY VIRUS 329– 497– 603– 759– POLYPROTEIN TYPE 1(JRCSF ISOLATE) 363 586 704 835 GP160 PRECURSOR PENV_HV1KB ENVELOPEHUMAN IMMUNODEFICIENCY VIRUS  89– 338– 511– 555–  618–  681–  772–POLYPROTEIN TYPE 1 (STRAIN KB-I-GP32) 122 372 545 599 677 718 848 GP160PRECURSOR PENV_HV1MA ENVELOPE HUMAN IMMUNODEFICIENCY 259– 507– 617– 770–POLYPROTEIN VIRUS TYPE 1 (MAL ISOLATE) 300 596 714 825 GP160 PRECURSORPENV_HV1MF ENVELOPE HUMAN IMMUNODEFICIENCY 503– 622– 765– POLYPROTEINVIRUS TYPE 1 (MFA ISOLATE) 592 710 841 GP160 PRECURSOR PENV_HV1MNENVELOPE HUMAN IMMUNODEFICIENCY 336– 506– 617– 774– POLYPROTEIN VIRUSTYPE 1 (MN ISOLATE) 370 595 713 841 GP160 PRECURSOR PENV_HV1N5 ENVELOPEHUMAN IMMUNODEFICIENCY VIRUS 326– POLYPROTEIN TYPE 1 (NEW YORK-5 ISOL360 GP160 PRECURSOR PENV_HV1ND ENVELOPE HUMAN IMMUNODEFICIENCY 249– 495–601– 757– POLYPROTEIN VIRUS TYPE 1 (NDK ISOLATE) 290 584 702 825 GP160PRECURSOR PENV_HV1OY ENVELOPE HUMAN IMMUNODEFICIENCY 336– 497– 610– 766–POLYPROTEIN VIRUS TYPE 1 (OY1 ISOLATE) 370 593 711 842 GP160 PRECURSORPENV_HV1PV ENVELOPE HUMAN IMMUNODEFICIENCY 505– 610– 767– POLYPROTEINVIRUS TYPE 1 (PV22 ISOLATE) 594 712 843 GP160 PRECURSOR PENV_HV1RHENVELOPE HUMAN IMMUNODEFICIENCY VIRUS 344– 507– 619– 776– POLYPROTEINTYPE 1 (RF/HAT ISOLATE) 378 603 721 852 GP160 PRECURSOR PENV_HV1S1ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS 496– 602– 758– POLYPROTEIN TYPE 1(SF162 ISOLATE) 585 703 830 GP160 PRECURSOR PENV_HV1S3 ENVELOPE HUMANIMMUNODEFICIENCY 332– 494– 607.708 763– POLYPROTEIN VIRUS TYPE 1 (SF33ISOLATE) 366 590 837 GP160 PRECURSOR PENV_HV1SC ENVELOPE HUMANIMMUNODEFICIENCY 331– 498– 611– 767– POLYPROTEIN VIRUS TYPE 1 (SCISOLATE) 365 594 712 834 GP160 PRECURSOR PENV_HV1W1 ENVELOPE HUMANIMMUNODEFICIENCY 331– 498– 611– 767– POLYPROTEIN VIRUS TYPE 1 (WMJ1ISOLATE) 365 594 712 836 GP160 PRECURSOR PENV_HV1W2 ENVELOPE HUMANIMMUNODEFICIENCY 327– 489– 602– 758– POLYPROTEIN VIRUS TYPE 1 (WMJ2ISOLATE) 361 584 703 827 GP160 PRECURSOR PENV_HV1Z2 ENVELOPE HUMANIMMUNODEFICIENCY VIRUS 255– 502– 610– 764– POLYPROTEIN TYPE 1(Z2/CDC-Z34 ISOLAT 296 591 709 831 GP160 PRECURSOR PENV_HV1Z3 ENVELOPEHUMAN IMMUNODEFICIENCY VIRUS 251– POLYPROTEIN TYPE 1 (ZAIRE 3 ISOLATE)292 GP160 PRECURSOR PENV_HV1Z6 ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS256– 504– 609– 766– POLYPROTEIN TYPE 1 (ZAIRE 6 ISOLATE) 297 593 711 840GP160 PRECURSOR PENV_HV1Z8 ENVELOPE HUMAN IMMUNODEFICIENCY 266– 512–617– 682–  774– POLYPROTEIN VIRUS TYPE 1 (Z-84 ISOLATE) 307 601 675 719831 GP160 PRECURSOR PENV_HV1ZH ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS522– 612– 675– 777– POLYPROTEIN TYPE 1 (ZAIRE HZ321 ISOLA 594 671 712839 GP160 PRECURSOR PENV_HV2BE ENVELOPE HUMAN IMMUNODEFICIENCY 447– 510–617– POLYPROTEIN VIRUS TYPE 2 (ISOLATE DEN) 481 595 680 GP160 PRECURSORPENV_HV2CA ENVELOPE HUMAN IMMUNODEFICIENCY 512– 619– POLYPROTEIN VIRUSTYPE 2 (ISOLATE CAM2) 597 709 GP160 PRECURSOR PENV_HV2D1 ENVELOPE HUMANIMMUNODEFICIENCY 501– 608– POLYPROTEIN VIRUS TYPE 2 (ISOLATE D194) 586698 GP160 PRECURSOR PENV_HV3G1 ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS439– 502– 609– POLYPROTEIN TYPE 2 (ISOLATE GHANA-1 473 587 699 GP160PRECURSOR PENV_HV2NZ ENVELOPE HUMAN IMMUNODEFICIENCY VIRUS 488– 609–POLYPROTEIN TYPE 2 (ISOLATE NIH-Z) 587 699 GP160 PRECURSOR PENV_HV2ROENVELOPE HUMAN IMMUNODEFICIENCY 511– 618– POLYPROTEIN VIRUS TYPE 2(ISOLATE ROD) 596 708 GP160 PRECURSOR PENV_HV2S2 ENVELOPE HUMANIMMUNODEFICIENCY VIRUS 442– 505– 612– POLYPROTEIN TYPE 2 (ISOLATE ST/24,1C# 476 590 702 GP160 PRECURSOR PENV_HV2SB ENVELOPE HUMANIMMUNODEFICIENCY VIRUS 526– 614– POLYPROTEIN TYPE 2 (ISOLATE SBL1SY) 588700 GP160 PRECURSOR PENV_HV2ST ENVELOPE HUMAN IMMUNODEFICIENCY 442– 505–612– POLYPROTEIN VIRUS TYPE 2 (ISOLATE ST) 476 590 702 GP160 PRECURSORPENV_IPMAE ENV POLYPROTEIN MOUSE INTRACISTERNAL 367– 465– PRECURSORA-PARTICLE 422 527 PENV_JSRV ENV POLYPROTEIN SHEEP PULMONARY 403– 571–PRECURSOR ADENOMATOSIS VIRUS 455 605 PENV_MCFF ENV POLYPROTEIN MINK CELLFOCUS-FORMING 473– 537– PRECURSOR MURINE LEUKEMIA VIRUS 525 571PENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING 474– 538– PRECURSOR(COAT MURINE LEUKEMIA VIRUS (ISOLA 526 572 POLYPROTE PENV_MLVAV ENVPOLYPROTEIN AKV MURINE LEUKEMIA VIRUS 503– 567– PRECURSOR 555 601PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA 498– 562– PRECURSORVIRUS 550 596 PENV_MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS520– 576– PRECURSOR (ISOLATE 57) 564 610 PENV_MLVFF ENV POLYPROTEINFRIEND MURINE LEUKEMIA VIRUS 520– 576– PRECURSOR (ISOLATE FB29) 564 610PENV_MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 520– 576–PRECURSOR (ISOLATE PVC-211) 564 610 PENV_MLVHO ENV POLYPROTEIN HOMULVMURINE LEUKEMIA VIRUS 504– 563– PRECURSOR 551 597 PENV_MLVKI ENVPOLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS  40– 104– 92 138 PENV_MLVMOENV POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 502– 566– PRECURSOR 554600 PENV_MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 497– 561–PRECURSOR VIRUS 549 595 PENV_MLVRK ENV POLYPROTEIN RADIATION MURINELEUKEMIA 497– 561– PRECURSOR VIRUS (STRAIN KAPLAN) 549 595 PENV_MMTVBENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS 477– 556– (STRAIN BR6) 539 612PENV_MMTVO ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS 477– 556– (STRAINGR) 539 612 PENV_MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 408– 474PENV_MSVFB ENV POLYPROTEIN FBJ MURINE OSTEOSARCOMA VIRUS  43– 107– 95141 PENV_OMVVS ENV POLYPROTEIN OVINE LENTIVIRUS  22– 185– 664– 780–PRECURSOR (STRAIN 64 223 746 816 SA-OMVV) PENV_RWCFV ENV POLYPROTEINRAUSCHER MINK CELL FOCUS- 484– 540– PRECURSOR INDUCING VIRUS 528 574PENV_RSFFV ENV POLYPROTEIN RAUSCHER SPLEEN FOCUS- 342– PRECURSOR FORMINGVIRUS 376 PENV_SFV1 ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1)  1– 101–154– 321–  563–  658–  866– 41 140 205 355 651 693 904 PENV_SFV3L ENVPOLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3 /  5– 158– 319– 560.706  863–STRAIN LK3) 46 209 357 901 PENV_SIVA1 ENVELOPE SIMIAN IMMUNODEFICIENCY269– 551– 643– POLYPROTEIN VIRUS (AGM155 ISOLATE) 310 623 693 GP160PRECURSOR PENV_SIVAG ENVELOPE SIMIAN IMMUNODEFICIENCY 556– 651– 803–POLYPROTEIN VIRUS (AGM3 ISOLATE) 628 699 852 GP160 PRECURSOR PENV_SIVA1ENVELOPE SIMIAN IMMUNODEFICIENCY 257– 336– 535– 627–  792– POLYPROTEINVIRUS (ISOLATE AGM/CLONE GR 291 370 607 684 840 GP160 PRECURSORPENV_SIVAT ENVELOPE SIMIAN IMMUNODEFICIENCY 264– 549– 644– 796–POLYPROTEIN VIRUS (TYO-1 ISOLATE) 298 621 692 833 GP160 PRECURSORPENV_SIVCZ ENVELOPE CHIMPANZEE IMMUNODEFICIENCY 253– 330– 512– 669– 803– POLYPROTEIN VIRUS (SIV(CPZ)) 291 365 584 703 837 GP160 PRECURSORPENV_SIVGB ENVELOPE SIMIAN IMMUNODEFICIENCY 566– 677– POLYPROTEIN VIRUS(ISOLATE GB1) 654 725 GP160 PRECURSOR PENV_SIVM1 ENVELOPE SIMIANIMMUNODEFICIENCY 114– 465– 528– 635–  809– POLYPROTEIN VIRUS (MM142-83ISOLATE) 151 516 613 725 864 GP160 PRECURSOR PENV_SIVM2 ENVELOPE SIMIANIMMUNODEFICIENCY  71– 161– 245– POLYPROTEIN VIRUS (MM251 ISOLATE) 109219 286 GP160 PRECURSOR PENV_SIVMK ENVELOPE SIMIAN IMMUNODEFICIENCY 464–540– 638– POLYPROTEIN VIRUS (K6W ISOLATE) 505 612 724 GP160 PRECURSORPENV_SIVML ENVELOPE SIMIAN IMMUNODEFICIENCY 464– 540– 638– POLYPROTEINVIRUS (K78 ISOLATE) 505 612 724 GP160 PRECURSOR PENV_SIVS4 ENVELOPESIMIAN IMMUNODEFICIENCY 466– 517– 638– 812– POLYPROTEIN VIRUS (F236/SMH4ISOLATE) 509 616 728 853 GP160 PRECURSOR PENV_SIVSP ENVELOPE SIMIANIMMUNODEFICIENCY 470– 521– 642– 811– POLYPROTEIN VIRUS (PB1/BC13ISOLATE) 513 620 732 848 GP160 PRECURSOR PENV_SMRVH ENV POLYPROTEINSQUIRREL MONKEY RETROVIRUS 400– PRECURSOR (SMRV-11) 466 PENV_SRV1 ENVPOLYPROTEIN SIMIAN RETROVIRUS SRV-1 409– 475 PENV_VTLV ENV POLYPROTEINVISNA LENTIVIRUS  21– 184– 637– 773– PRECURSOR (STRAIN 1514) 62 222 740809 PENV_VTLV1 ENV POLYPROTEIN VISNA LENTIVIRUS  21– 184– 643– 780–PRECURSOR (STRAIN 62 222 746 816 1514 / CLONE LV1-1KS1) PENV_VTLV2 ENVPOLYPROTEIN VISNA LENTIVIRUS  21– 184– 645– 782– PRECURSOR (STRAIN 62222 748 818 1514 / CLOSE LV1-1KS2) PERBA_AVTER ERBA ONCOGENE AVIANERYTHROBLASTOSIS 106– PROTEIN VIRUS (STRAIN ES4) 140 PETF1_FOWP1 EARLYFOWLPOX VIRUS 190– 553– TRANSCRIPTION (STRAIN FP-1) 224 587 FACTOR 70 KDSUBUNIT PETF1_SFVKA EAEARLY SHOPE FIBROMA VIRUS  37– 267– 550–TRANSCRIPTION (STRAIN 71 340 587 FACTOR 70 KASZA) KD SUBUNIT PETF1_VACCCEAEARLY VACCINIA VIRUS (STRAIN  23– 307– TRANSCRIPTION COPENHAGEN) 71341 FACTOR 70 KD SUBUNIT PETF1_VACCV EAEARLY VACCINIA VIRUS  23– 307–TRANSCRIPTION (STRAIN WR) 71 341 FACTOR 70 KD SUBUNIT PETF2_VACCC EARLYVACCINIA VIRUS (STRAIN  52– 174– TRANSCRIPTION COPENHAGEN) 97 208 FACTOR82 KD SUBUNIT PETF2_VARV EARLY VARIOLA VIRUS  52– 174– TRANSCRIPTION 97208 FACTOR 82 KD SUBUNIT PEXON_HCMVA ALKALINE HUMAN CYTOMEGALOVIRUS  80–EXONUCLEASE (STRAIN AD169) 114 PEXON_HSVEB ALKALINE EQUINE HERPESVIRUSTYPE 1  89– EXONUCLEASE (STRAIN AB4P) 141 PEXON_PRVN3 ALKALINEPSEUDORABIES VIRUS  82– EXONUCLEASE (STRAIN N1A-3) 120 PEXON_VZVDALKALINE VARICELLA-Z0STER VIRUS 109– 342– EXONUCLEASE (STRAIN DUMAS) 157383 PFIB2_ADE40 41.4 KD FIBER HUMAN ADENOVIRUS TYPE 40 182– PROTEIN 237PFIB2_ADE41 41.4 KD FIBER HUMAN ADENOVIRUS TYPE 41 182– PROTEIN 223PFIBP_ADEO3 FIBER HUMAN ADENOVIRUS TYPE 3 156– PROTEIN 194 PFIBP_ADE07FIBER HUMAN ADENOVIRUS TYPE 7 176– PROTEIN 210 PFIBP_ADE40 FIBER HUMANADENOVIRUS TYPE 40 303– PROTEIN 352 PFIBP_ADE41 FIBER HUMAN ADENOVIRUSTYPE 41 320– PROTEIN 366 PFIBP_ADEB3 FIBER BOVINE ADENOVIRUS TYPE 3 181–585– PROTEIN 215 626 PFOSX_MSVFR V-FOS/FOX FBR MURINE OSTEOSARCOMA VIRUS131– TRANSFORMING 169 PROTEIN PFOS_AVINK P55-V-FOS AVIAN RETROVIRUS NK24109– TRANSFORMING 152 PROTEIN PFOS_MSVFB P55-V-FOS FBJ MURINEOSTEOSARCOMA VIRUS 155– TRANSFORMING 193 PROTEIN PGAGC_AVISCP47(GAG-CRK) AVIAN SARCOMA VIRUS  57– PROTEIN (STRAIN CT10) 101PGAG_AVEV1 GAG AVIAN ENDOGENOUS VIRUS EV-1  57– POLYPROTEIN 94PGAG_AVEV2 GAG AVIAN ENDOGENOUS ROUS-  6– POLYPROTEIN ASSOCIATED VIRUS-043 PGAG_AVIMC GAG AVIAN MYELOCYTOMATOSIS  57– POLYPROTEIN VIRUS MC29 94PGAG_AVIMD GAG AVIAN MYELOCYTOMATOSIS  57– POLYPROTEIN VIRUS HB1 94PGAG_AVISU CORE AVIAN SARCOMA VIRUS  57– PROTEIN P19 (STRAIN UR2) 94PGAG_AVISY GAG AVIAN SARCOMA VIRUS  57– POLYPROTEIN (STRAIN Y73) 94PGAG_BIV06 GAG BOVINE IMMUNODEFICIENCY 1– POLYPROTEIN VIRUS (ISOLATE106) 41 (P53) PGAG_EIAVY GAG EQUINE INFECTIOUS ANEMIA  61– POLYPROTEINVIRUS (CLONE CL22) 118 PGAG_FIVPE GAG FELINE IMMUNODEFICIENCY  76–POLYPROTEIN VIRUS (ISOLATE PETALUMA) 110 PGAG_FIVSD GAG FELINEIMMUNODEFICIENCY  76– POLYPROTEIN VIRUS (ISOLATE SAN DIEGO) 110PGAG_FIVT2 GAG FELINE IMMUNODEFICIENCY  76– POLYPROTEIN VIRUS (ISOLATETM2) 110 PGAG_FLV GAG FELINE LEUKEMIA VIRUS 496– POLYPROTEIN 537PGAG_FOAMV GAG HUMAN SPUMARETROVIRUS 130– 391– 439– 607– POLYPROTEIN 186425 480 655 PGAG_FSVMD GAG FELINE SARCOMA VIRUS 499– POLYPROTEIN (STRAINMCDONOUGH) 534 PGAG_FUJSV GAG FUJINAMI SARCOMA VIRUS  57– POLYPROTEIN 94PGAG_GALV GAG GIBBON APE LEUKEMIA VIRUS 393– POLYPROTEIN 444 PGAG_HV1A2GAG HUMAN IMMUNODEFICIENCY VIRUS  87– 294– POLYPROTEIN TYPE 1 (ARV2/SF2ISOLATE 133 328 PGAG_HV1B1 GAG HUMAN IMMUNODEFICIENCY  90– 292–POLYPROTEIN VIRUS TYPE 1 (BH10 ISOLATE) 131 326 PGAG_HV1B5 GAG HUMANIMMUNODEFICIENCY  90– 292– POLYPROTEIN VIRUS TYPE 1 (BH5 ISOLATE) 131326 PGAG_HV1BR GAG HUMAN IMMUNODEFICIENCY  90– 292– POLYPROTEIN VIRUSTYPE 1 (BRU ISOLATE) 131 326 PGAG_HV1C4 GAG HUMAN IMMUNODEFICIENCY VIRUS 90– 292– POLYPROTEIN TYPE 1 (CDC-451 ISOLATE) 131 326 PGAG_HV1EL GAGHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (EL1 ISOLATE)  93– 292– POLYPROTEIN131 326 PGAG_HV1H2 GAG HUMAN IMMUNODEFICIENCY  90– 292– POLYPROTEINVIRUS TYPE 1 (HXB2 ISOLATE) 131 326 PGAG_HV1J3 GAG HUMANIMMUNODEFICIENCY  87– 292– POLYPROTEIN VIRUS TYPE 1 (JH3 ISOLATE) 131326 PGAG_HV1JR GAG HUMAN IMMUNODEFICIENCY VIRUS  87– 292– POLYPROTEINTYPE 1 (JRCSF ISOLATE) 131 326 PGAG_HV1MA GAG HUMAN IMMUNODEFICIENCY 90– POLYPROTEIN VIRUS TYPE 1 (MAL ISOLATE) 137 PGAG_HV1MN GAG HUMANIMMUNODEFICIENCY  87– 295– POLYPROTEIN VIRUS TYPE 1 (MN ISOLATE) 134 329PGAG_HV1N5 GAG HUMAN IMMUNODEFICIENCY  90– 292– POLYPROTEIN VIRUS TYPE 1(NEW YORK-5 ISOL 131 326 PGAG_HV1ND GAG HUMAN IMMUNODEFICIENCY  87– 289–POLYPROTEIN VIRUS TYPE 1 (NDK ISOLATE) 128 323 PGAG_HV1OY GAG HUMANIMMUNODEFICIENCY VIRUS TYPE 1 (OY1 ISOLATE)  90– 292– POLYPROTEIN 131326 PGAG_HV1PV GAG HUMAN IMMUNODEFICIENCY  90– 292– POLYPROTEIN VIRUSTYPE 1 (PV22 ISOLATE) 131 326 PGAG_HV1RH GAG HUMAN IMMUNODEFICIENCYVIRUS  90– 292– POLYPROTEIN TYPE 1 (RF/HAT ISOLATE) 131 326 PGAG_HV1U4GAG HUMAN IMMUNODEFICIENCY VIRUS  87– POLYPROTEIN TYPE 1 (STRAIN UGANDAN127 PGAG_HV1W2 GAG HUMAN IMMUNODEFICIENCY VIRUS 292– POLYPROTEIN TYPE 1(WMJ2 ISOLATE) 326 PGAG_HV1Z2 GAG HUMAN IMMUNODEFICIENCY VIRUS  87– 293–POLYPROTEIN TYPE 1 (Z2/CDC-Z34 ISOLAT 132 327 PGAG_HV2SB GAG HUMANIMMUNODEFICIENCY VIRUS 292– POLYPROTEIN TYPE 2 (ISOLATE SBLISY) 326PGAG_IPHA RETROVIRUS- HAMSTER INTRACISTERNAL  93– 320– RELATED GAGA-PARTICLE 127 357 POLYPROTEIN PGAG_IPMA RETROVIRUS- MOUSEINTRACISTERNAL A-PARTICLE  67– RELATED GAG 103 POLYPROTEIN PGAG_IPMAERETROVIRUS- MOUSE INTRACISTERNAL  89– 138– RELATED GAG A-PARTICLE 133172 POLYPROTEIN PGAG_JSRV GAG SHEEP PULMONARY 470– POLYPROTEINADENOMATOSIS VIRUS 504 PGAG_MMTVB GAG MOUSE MAMMARY TUMOR VIRUS  83–156– POLYPROTEIN (STRAIN BR6) 151 190 PGAG_MMTVG GAG MOUSE MAMMARY TUMORVIRUS  83– 156– POLYPROTEIN (STRAIN GR) 151 190 PGAG_MPMV GAG SIMIANMASON-PFIZER VIRUS 222– POLYPROTEIN 260 PGAG_RSVP GAG ROUS SARCOMA VIRUS(STRAIN  57– POLYPROTEIN PRAGUE C) 94 PGAG_SCVLA MAJOR COATSACCHAROMYCES CEREVISIAE 102– 490– PROTEIN VIRUS L-A (SCV-L-A) 139 531PGAG_SFV1 GAG SIMIAN FOAMY VIRUS (TYPE 1) 128– 378– 583– POLYPROTEIN 177416 634 PGAG_SFV3L GAG SIMIAN FOAMY VIRUS (TYPE 3 373– 435– 591–POLYPROTEIN / STRAIN LK3) 407 522 632 PGAG_S1VA1 GAG SIMIANIMMUNODEFICIENCY VIRUS 302– POLYPROTEIN (AGM155 ISOLATE) 336 PGAG_S1VAGGAG SIMIAN IMMUNODEFICIENCY 306– POLYPROTEIN VIRUS (AGM3 ISOLATE) 340PGAG_S1VA1 GAG SIMIAN IMMUNODEFICIENCY VIRUS 183– 473– POLYPROTEIN(ISOLATE AGM / CLONE GR 217 507 PGAG_S1VAT GAG SIMIAN IMMUNODEFICIENCY302– POLYPROTEIN VIRUS (TYO-1 ISOLATE) 336 PGAG_S1VCZ GAG CHIMPANZEEIMMUNODEFICIENCY 301– POLYPROTEIN VIRUS (SIV(CPZ)) 335 PGAG_SIVGB GAGSIMIAN IMMUNODEFICIENCY 163– 223– 283– POLYPROTEIN VIRUS (ISOLATE GB1)204 267 317 PGAG_SMSAV GAG SIMIAN SARCOMA VIRUS 394– POLYPROTEIN 431PHELI_HSV11 PROBABLE HERPES SIMPLEX VIRUS (TYPE 172– 769– HELICASE 1 /STRAIN 17) 206 820 PHELI_HSV2H PROBABLE HERPES SIMPLEX VIRUS (TYPE 468–670– HELICASE 2 / STRAIN HG52) 502 721 PHELI_HSVSA PROBABLE HERPES VIRUSSAIMIRI 158– 413– 599– HELICASE (STRAIN 11) 203 449 633 PHELI_VZVDPROBABLE VARICELLA-ZOSTER VIRUS 445– 782– HELICASE (STRAIN DUMAS) 517821 PHEMA_CVBF HEMAGGLUTININ- BOVINE CORONA VIRUS (STRAIN 208– ESTERASEF15) 242 PRECURSOR PHEMA_CVBLY HEMAGGLUTININ- BOVINE CORONA VIRUS(STRAIN 208– ESTERASE LY-138) 242 PRECURSOR PHEMA_CVBM HEMAGGLUTININ-BOVINE CORONA VIRUS (STRAIN 208– ESTERASE MEBUS) 242 PRECURSORPHEMA_CVBQ HEMAGGLUTININ- BOVINE CORONA VIRUS (STRAIN 208– ESTERASEQUEBEC). 242 PRECURSOR PHEMA_CVHOC HEMAGGLUTININ- HUMAN CORONA VIRUS(STRAIN 208– ESTERASE OC43) 242 PRECURSOR PHEMA_IAAIC HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 380– PRECURSOR A/AICHI/2/68) 456 PHEMA_IABANHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 364– PRECURSOR A/BANGKOK/1/79)440 PHEMA_IABUD HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 378– PRECURSORA/BUDGERIGAR/HOKKAIDO/1/77) 454 PHEMA_IACKA HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 378– PRECURSOR A/CHICKEN/ALABAMA/1/75) 454 PHEMA_IACKGHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 108– 375– 414.528 PRECURSORA/CHICKEN/GERMANY/N/49) 142 475 PHEMA_IACKP HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 360– 487– PRECURSOR A/CHICKEN/PENNSYLVANIA/1/83) 452 532PHEMA_IACKQ HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 360– 487– PRECURSORA/CHICKEN/PENNSYLVANIA/1370/ 452 532 PHEMA_IACKS HEMAGGLUTININ INFLUENZAA VIRUS (STRAIN 377– 504– PRECURSOR A/CHICKEN/SCOTLAND/59) 469 549PHEMA_IACKV HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 112– 377– PRECURSORA/CHICKEN/VICTORIA/1/85) 146 469 PHEMA_IADA1 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 378– PRECURSOR A/DUCK/ALBERTA/28/76) 454 PHEMA_IADA2HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 377– 495– PRECURSORA/DUCK/ALBERTA/60/76) 476 547 PHEMA_IADA3 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 380– PRECURSOR A/DUCK/ALBERTA/78/76) 453 PHEMA_IADA4HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– 506– PRECURSORA/DUCK/ALBERTA/35/76) 478 548 PHEMA_IADCZ HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 378– PRECURSOR A/DUCK/CZECHOSLOVAKIA/56) 454 PHEMA_IADE1HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN  21– 377– PRECURSORA/DUCK/ENGLAND/1/56) 55 472 PHEMA_IADH1 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 364– PRECURSOR A/DUCK/HOKKAIDO/5/77) 440 PHEMA_IADH2HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 364– PRECURSORA/DUCK/HOKKAIDO/8/80) 440 PHEMA_IADH3 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 364– PRECURSOR A/DUCK/HOKKAIDO/33/80) 440 PHEMA_IADH4HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 364– PRECURSORA/DUCK/HOKKAIDO/7/82) 440 PHEMA_IADH5 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 364– PRECURSOR A/DUCK/HOKKAIDO/21/82) 440 PHEMA_IADH6HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 364– PRECURSORA/DUCK/HOKKAIDO/9/85) 440 PHEMA_IADH7 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 364– PRECURSOR A/DUCK/NOKKAIDO/10/85) 440 PHEMA_IADIRHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– 506– PRECURSORA/DUCK/IRELAND/113/83) 471 551 PHEMA_IADM1 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN  21– PRECURSOR A/DUCK/MEMPHIS/546/76 55 PHEMA_IADM2HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 380– PRECURSORA/DUCK/MEMPHIS/928/74) 456 PHEMA_IADNY HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN  21– PRECURSOR A/DUCK/NEW YORK/12/78) 55 PHEMA_IADNZHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 378– PRECURSOR A/DUCK/NEWZEALAND/31/76) 454 PHEMA_IADU1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21– PRECURSOR A/DUCK/UKRAINE/1/60) 55 PHEMA_IADU3 HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 380– PRECURSOR A/DUCK/UKRAINE/1/63) 456PHEMA_IAEN7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 380– PRECURSORA/ENGLAND/321/77 456 PHEMA_IAFPR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN377– PRECURSOR A/FOWL PLAGUE VIRUS/ROSTOCK 477 PHEMA_IAGRE HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 378– PRECURSOR A/GREY TEAL/AUSTRALIA/2/79) 454PHEMA_IAGU2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 378– PRECURSORA/GULL/MARYLAND/704/77) 473 PHEMA_IAGUA HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 377– PRECURSOR A/GULL/ASTRAKHAN/227/84) 476 PHEMA_IAHALHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– PRECURSORA/EQUINE/ALGIERS/72) 455 PHEMA_IAHC6 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 112– 360– 503– PRECURSOR A/EQUINE/CAMBRIDGE/1/63) 146 484 537PHEMA_IAHC7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 112– 360– 503–PRECURSOR A/EQUINE/CAMBRIDGE/1/73) 146 484 537 PHEMA_IAHCD HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 360– 503– PRECURSOR A/EQUINE/C. DETROIT/1/64)484 537 PHEMA_IAHDE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 360– 503–PRECURSOR A/EQUINE/DETROIT/1/64) 484 537 PHEMA_IAHFO HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 379– PRECURSOR A/EQUINE/FONTAINEBLEAU/76) 455PHEMA_IAHK6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– PRECURSORA/EQUINE/KENTUCKY/2/86) 455 PHEMA_IAHK7 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 379– PRECURSOR A/EQUTNE/KENTUCKY/1/87) 455 PHEMA_IAHLEHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 112– 360– 503– PRECURSORA/EQUINE/LEXINGTON/1/66) 146 484 537 PHEMA_IAHLO HEMAGGLUTININ INFLUENZAA VIRUS (STRAIN 112– 360– 503– PRECURSOR A/EQUINE/LONDON/1416/73) 146484 537 PHEMA_IAHMI HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379–PRECURSOR A/EQUINE/MIAM1/1/63 455 PHEMA_IAHNM HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 379– PRECURSOR A/EQUINE/NEW MARKET/76) 455 PHEMA_IAHNNHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 112– 360– 503– PRECURSORA/EQUINE/NEW MARKET/1/77) 146 484 537 PHEMA_IAHPR HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 112– 360– 503– PRECURSOR A/EQUINE/PRAGUE/1/56)146 484 537 PHEMA_IAHRO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379–PRECURSOR A/EQUINE/ROMANIA/80) 455 PHEMA_IAHSA HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 379– PRECURSOR A/EQUINE/SANTIAGO/1/85) 455 PHEMA_IAHSPHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 112– 360– 503– PRECURSORA/EQUTNE/SAO PAULO/1/76) 146 484 537 PHEMA_IAHSW HEMAGGLUTININ INFLUENZAA VIRUS (STRAIN 112– 360– 503– PRECURSOR A/EQUINE/SWITZERLAND/137/72)146 484 537 PHEMA_IAHTE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379–PRECURSOR A/EQUINE/TENNESSEE/5/86) 455 PHEMA_IAHTO HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 379– PRECURSOR A/EQUINE/TOKYO/71) 455PHEMA_IAHUR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– PRECURSORA/EQUINE/URUGUAY/1/63) 455 PHEMA_IAJAP HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 375– 502– PRECURSOR A/JAPAN/305/57 467 547 PHEMA_IAKIEHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 376– 506– PRECURSORA/KIEV/59/79) 478 541 PHEMA_IALEN HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 376– 506– PRECURSOR A/LENINGRAD/54/1) 478 548 PHEMA_IAMAAHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 377– PRECURSORA/MALLARD/ASTRAKHAN/244/82) 453 PHEMA_IAMAB HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 382– PRECURSOR A/MALLARD/ASTRAKHAN/263/82) 458 PHEMA_IAMAOHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 380– PRECURSOR A/MALLARD/NEWYORK/6874/78) 456 PHEMA_IAME1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN380– PRECURSOR A/MEMPHIS/1/71) 456 PHEMA_IAME2 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 380– PRECURSOR A/MEMPHIS/102/72) 456 PHEMA_IAME6HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 364– PRECURSOR A/MEMPHIS/6/86)440 PHEMA_IAMIN HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 108– 375–PRECURSOR A/MINK/SWEDEN/84) 142 475 PHEMA_IANT6 HEMAGGLUTININ INFLUENZAA VIRUS (STRAIN 380– PRECURSOR A/NT/60/68) 456 PHEMA_IAPIL HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 378– 496– PRECURSOR A/PILOTWHALE/MAINE/321/14) 477 534 PHEMA_IAPUE HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 376– 506– PRECURSOR A/PUERTO RICO/8/34) 478 548 PHEMA_IARUDHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 378– PRECURSOR A/RUDDYTURNSTONE/NEW JERSE 454 PHEMA_IASE2 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 378– PRECURSOR A/SEAL/MASSACHUSETTS/133/82) 454 PHEMA_IASH2HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– 506– PRECURSORA/SHEARWATER/AUSTRALIA/72) 474 552 PHEMA_IASTA HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 112– 377– PRECURSOR A/STARLING/VICTORIA/5156/85) 146 469PHEMA_IATK1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– 506– PRECURSORA/TURKEY/IRELAND/1378/83) 471 551 PHEMA_IATKM HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 378– PRECURSOR A/TURKEY/MINNESOTA/833/80 454 PHEMA_IATKOHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 392– 504– PRECURSORA/TURKEY/ONTARIO/7732/66) 470 548 PHEMA_IATKP HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 378– 493– PRECURSOR A/TURKEY/ONTARIO/6118/68) 454 540PHEMA_IATKR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 30– 374– PRECURSORA/TURKEY/OREGON/71) 64 474 PHEMA_IATKW HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 373– 487– PRECURSOR TURKEY/WISCONSIN/1/66) 472 539 PHEMA_IATRAHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN  21– PRECURSORA/TERN/AUSTRALIA/G70C/75) 55 PHEMA_IAUDO HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 387– PRECURSOR A/UDORN/307/72) 456 PHEMA_IAUSS HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 376– 506– PRECURSOR A/USSR/90/77 478 548PHEMA_IAV17 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 381– PRECURSORA/VICTORIA/3/75) 457 PHEMA_IAWIL HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN375– 505– PRECURSOR A/WILSON-SMITH/33) 477 547 PHEMA_IAZCO HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 380– PRECURSOR A/SWINE/COLORADO/1/77) 456PHEMA_IAZH2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 364– PRECURSORA/SWINE/HONG KONG/81/78) 440 PHEMA_IAZH3 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 364– PRECURSOR A/SWINE/HONG KONG/126/82) 440 PHEMA_IAZINHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 379– 506– PRECURSORA/SWINE/INDIANA/1726/88) 478 548 PHEMA_1AZN1 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 379– 506– PRECURSOR A/SWINE/NEW JERSEY/11/76) 478 547PHEMA_IAZUK HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 380– PRECURSORA/SWINE/UK KEL/1/84 456 PHEMA_INBBE HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 388– PRECURSOR B/BEIJING/1/87 473 PHEMA_INBBO HEMAGGLUTINININFLUENZA B VIRUS (STRAIN 378– PRECURSOR B/BONN/43) 463 PHEMA_INBENHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 386– PRECURSOR B/ENGLAND/222/82)471 PHEMA_INBHK HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 381– PRECURSORB/HONG KONG/8/73) 463 PHEMA_INBLE HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 387– PRECURSOR B/LEE/4O) 472 PHEMA_INBMD HEMAGGLUTININ INFLUENZAB VIRUS (STRAIN 377– PRECURSOR B/MARYLAND/59) 462 PHEMA_INBMEHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 381– PRECURSOR B/MEMPHIS/6/86)468 PHEMA_INBOR HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 386– PRECURSORB/OREGON/5/80) 471 PHEMA_INBS1 HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN386– PRECURSOR B/SINGAPORE/222/79) 471 PHEMA_INBUS HEMAGGLUTINININFLUENZA B VIRUS (STRAIN 379– PRECURSOR B/USSR/100/83) 464 PHEMA_INBV1HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 381– PRECURSOR B/VICTORIA/3/85)466 PHEMA_INBVX HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 388– PRECURSORB/VICTORIA/2/87) 473 PHEMA_INCCA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN483– PRECURSOR C/CALIFORNIA/78) 571 PHEMA_INCEN HEMAGGLUTININ INFLUENZAC VIRUS (STRAIN 471– PRECURSOR C/ENGLAND/892/83) 559 PHEMA_INCGLHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 471– PRECURSOR C/GREATLAKES/1167/54) 559 PHEMA_INCHY HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN470– C/HYOGO/1/83) 558 PHEMA_INCJH HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 484– PRECURSOR C/JOHANNESBURG/1/66) 572 PHEMA_INCKYHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 470– C/KYOTO/41/82) 558PHEMA_INCM1 HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 470– PRECURSORC/MISSISSIPPI/80) 558 PHEMA_INCNA HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 470– C/NARA/82) 558 PHEMA_INCP1 HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 471– PRECURSOR C/PIG/BEIJING/10/81) 559 PHEMA_INCP2HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 471– PRECURSORC/PIG/BEIJING/115/81) 559 PHEMA_INCP3 MEASLES VIRUS INFLUENZA C VIRUS(STRAIN 471– (STRAIN HALLE) C/PIG/BEIJING/439/82) 559 PHEMA_INCTAHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 471– PRECURSOR C/TAYLOR/1233/47559 PHEMA_INCYA HEMAGGLUTININ INFLUENZA VIRUS (STRAIN 471– PRECURSORC/YAMAGATA/10/81) 559 PHEMA_MEASE HEMAGGLUTININ- MEASLES VIRUS (STRAIN 46– NEURAMINIDASE EDMONSTON) 90 PHEMA_MEASH HEMAGGLUTININ- MEASLESVIRUS (STRAIN  46– NEURAMINIDASE HALLE) 90 PHEMA_MEASI HEMAGGLUTININ-MEASLES VIRUS (STRAIN IP-3-CA)  46– NEURAMINIDASE 87 PHEMA_MEASYHEMAGGLUTININ- MEASLES VIRUS (STRAIN  46– NEURAMINIDASE YAMAGATA-1) 87PHEMA_MUMP1 HEMAGGLUTININ- MUMPS VIRUS (STRAIN SBL-1  34– NEURAMINIDASE99 PHEMA_MUMPM HEMAGGLUTININ- MUMPS VIRUS (STRAIN  34– NEURAMINIDASEMIYAHARA VACCINE) 99 PHEMA_MUMPR HEMAGGLUTININ- MUMPS VIRUS (STRAIN RW) 34– NEURAMINIDASE 99 PHEMA_MUMPS HEMAGGLUTININ- MUMPS VIRUS (STRAINSDL)  34– NEURAMINIDASE 99 PHEMA_NDVA HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS  8– 477– NEURAMINIDASE (STRAIN AUSTRALIA- 52 529 VICTORIA/32)PHEMA_NDVB HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  1– NEURAMINIDASE(STRAIN BEAUDETTE C/45) 49 PHEMA_NDVD HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS  1– NEURAMINIDASE (STRAIN D26/76) 52 PHEMA_NDVM HEMAGGLUTININ-NEWCASTLE DISEASE VIRUS  1– NEURAMINIDASE (STRAIN MIYADERA/51) 52PHEMA_NDVQ HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  1– NEURAMINIDASE(STRAIN QUEENSLAND/66) 52 PHEMA_NDVTG HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS  1– NEURAMINIDASE (STRAIN TEXAS G.B./48) 49 PHEMA_NDVUHEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  1– NEURAMINIDASE (STRAINULSTER/673 52 PHEMA_PHODV HEMAGGLUTININ- PHOCINE DISTEMPER VIRUS  39–NEURAMINIDASE 7) PHEMA_PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1 VIRUS 66– NEURAMINIDASE (STRAIN WASHINGTON/1957) 110 PHEMA_PI2HHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 247– NEURAMINIDASE 281PHEMA_PI2HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 2 VIRUS 247–NEURAMINIDASE (STRAIN TOSHIBA) 281 PHEMA_PI3B HEMAGGLUTININ- BOVINEPARAINFLUENZA 3 VIRUS  38– NEURAMINIDASE 93 PHEMA_PI3H4 HEMAGGLUTININ-HUMAN PARAINFLUENZA 3 VIRUS  13– 394– NEURAMINIDASE (STRAIN NIH 47885)110 428 PHEMA_PI3HA HEMAGGLUTININ- HUMAN PARA INFLUENZA 3 VIRUS  20–394– NEURAMINIDASE (STRAIN AUS/124854/74) 110 428 PHEMA_PI3HTHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS  13– 194.428 NEURAMINIDASE(STRAIN TEX/545/80) 110 PHEMA_PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3VIRUS  13– 394– NEURAMINIDASE (STRAIN TEX/9305/82) 110 428 PHEMA_PI3HVHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS  13– 394.428 NEURAMINIDASE(STRAIN TEX/12677/83) 110 PHEMA_PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA3 VIRUS  13– 394– NEURAMINIDASE (STRAIN WASH/641/79) 110 428 PHEMA_PI3HXHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS  13– .194.428 NEURAMINIDASE(STRAIN WASH/1511/73) 110 PHEMA_PI4HA HEMAGGLUTININ- HUMAN PARAINFLUENZA4A  54– NEURAMINIDASE VIRUS (STRAIN TOSHIBA) 88 PHEMA_RACV1HEMAGGLUTININ RACCOON POXVIRUS 166– 256– PRECURSOR 214 290 PHEMA_RINDKHEMAGGLUTININ- RINDERPEST VIRUS (STRAIN  46– NEURAMINIDASE KABETE O) 87PHEMA_RINDL HEMAGGLUTININ- RINDERPEST VIRUS (STRAIN L)  46– 191–NEURAMINIDASE 87 225 PHEMA_SEND5 HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z / 57– NEURAMINIDASE HOST MUTANTS) 110 PHEMA_SENDF HEMAGGLUTININ- SENDAIVIRUS (STRAIN  57– NEURAMINIDASE FUSHIMI) 110 PHEMA_SENDH HEMAGGLUTININ-SENDAI VIRUS (STRAIN  57– NEURAMINIDASE HARRIS) 110 PHEMA_SENDJHEMAGGLUTININ- SENDAI VIRUS (STRAIN HVJ)  57– NEURAMINIDASE 110PHEMA_SENDZ HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z)  57– NEURAMINIDASE110 PHEMA_SV41 HEMAGGLUTININ- SIMIAN VIRUS 41  18– 387– NEURAMINIDASE 52421 PHEMA_SV5 HEMAGGLUTININ- SIMIAN VIRUS 5 (STRAIN W3)  27–NEURAMINIDASE 82 PHEMA_SV5LN HEMAGGLUTININ- SIMIAN VIRUS 5 (ISOLATE  27–NEURAMINIDASE HUMAN/LN) 82 PHEMA_VARV HEMAGGLUTININ VARIOLA VIRUS 177–PRECURSOR 211 PHEX3_ADE02 PERIPENTONAL HUMAN ADENOVIRUS TYPE 2  90–HEXON- 134 ASSOCIATED PROTEIN PHEX3_ADE05 PERIPENTONAL HUMAN ADENOVIRUSTYPE 5  90– HEXON- 134 ASSOCIATED PROTEIN PHEX9_ADE02 HEXON- HUMANADENOVIRUS TYPE 2  85– ASSOCIATED 134 PROTEIN PHEX9_ADE05 HEXON- HUMANADENOVIRUS TYPE 5  85– ASSOCIATED 134 PROTEIN PHEX9_ADE07 HEXON- HUMANADENOVIRUS TYPE 7,  93– ASSOCIATED AND HUMAN ADENOVIRUS TYPE 138 PROTEINPHEX9_ADE12 HEXON- HUMAN ADENOVIRUS TYPE 12  83– ASSOCIATED 137 PROTEINPHEX9_ADE41 HEXON- HUMAN ADENOVIRUS TYPE 41  67– ASSOCIATED 126 PROTEINPKEX9_ADEC2 HEXON- CANINE ADENOVIRUS TYPE 2  53– ASSOCIATED 103 PROTEINPHEX9_ADENT HEXON- TUPAIA ADENOVIRUS  61– ASSOCIATED 109 PROTEINPHEX_ADE02 HEXON HUMAN ADENOVIRUS TYPE 2 341– 433– 583– PROTEIN 386 467624 PHEX_ADE05 HEXON HUMAN ADENOVIRUS TYPE 5 330– PROTEIN 379 PHEX_ADE40HEXON HUMAN ADENOVIRUS TYPE 40 303– 408– 553– PROTEIN 352 449 587PHEX_ADE41 HEXON HUMAN ADENOVIRUS TYPE 41 306– 555– PROTEIN 355 589PHEX_ADEB3 HEXON BOVINE ADENOVIRUS TYPE 3 301– 385– 544– 705– PROTEIN346 419 578 739 PHRG_COWPX HOST RANGE COWPOX VIRUS 320– 455– PROTEIN 395489 PI226_ASFB7 LATE AFRICAN SWINE FEVER VIRUS 110– PROTEIN I226R(STRAIN BA71V) 151 PIBMP_CAMV4 INCLUSION CAULIFLOWER MOSAIC VIRUS  3–378– BODY MATRIX (STRAIN D4) 44 419 PROTEIN PIBMP_CAMVB INCLUSIONCAULIFLOWER MOSAIC VIRUS 379– BODY MATRIX (STRAIN DAR1 1) 420 PROTEINPIBMP_CAMVC INCLUSION CAULIFLOWER MOSAIC VIRUS  3– 378– BODY MATRIX(STRAIN CM-1841) 37 419 PROTEIN PIBMP_CAMVD INCLUSION CAULIFLOWER MOSAICVIRUS  3– 378– BODY MATRIX (STRAIN D/H) 44 419 PROTEIN PIBMP_CAMVEINCLUSION CAULIFLOWER MOSAIC VIRUS  3– 378– BODY MATRIX (STRAIN BBC) 37419 PROTEIN PIBMP_CAMVJ INCLUSION CAULIFLOWER MOSAIC VIRUS  3– 378– BODYMATRIX (STRAIN S-JAPAN) 37 419 PROTEIN PIBMP_CAMVN INCLUSION CAULIFLOWERMOSAIC VIRUS  3– 378– BODY MATRIX (STRAIN NY8153) 37 419 PROTEINPIBMP_CAMVP INCLUSION CAULIFLOWER MOSAIC VIRUS  3– 374– BODY MATRIX(STRAIN PV147) 37 419 PROTEIN PIBMP_CAMVS INCLUSION CAULIFLOWER MOSAICVIRUS  3– 378– BODY MATRIX (STRAIN STRASBOURG) 37 419 PROTEIN PIBMP_CERVINCLUSION CARNATION ETCHED RING VIRUS  3– BODY MATRIX 37 PROTEINPIBMP_FMVD INCLUSION FIGWORT MOSAIC VIRUS  1– 372– BODY MATRIX (STRAINDXS) 51 406 PROTEIN PIBMP_SOCMV INCLUSION  1– 132– BODY MATRIX 48 179PROTEIN PIC18_HCMVA PROBABLE HUMAN CYTOMEGALOVIRUS  53– 290– 498–PROCESSING (STRAIN AD169) 98 324 532 AND TRANSPORT PROTEIN PIC18_HSV11PROCESSING HERPES SIMPLEX VIRUS (TYPE 331– AND TRANSPORT 1 / STRAIN 17)365 PROTEIN PIC18_HSV1A PROCESSING HERPES SIMPLEX VIRUS (TYPE 331– ANDTRANSPORT 1 / STRAIN ANGELOTTI) 365 PROTEIN PIC18_HSV1F PROCESSINGHERPES SIMPLEX VIRUS (TYPE 324– AND TRANSPORT 1 / STRAIN F) 362 PROTEINPIC18_HSVB2 PROBABLE BOVINE HERPES VIRUS TYPE 2 466– PROCESSING (STRAINBMV) 500 AND TRANSPORT PROTEIN PIC18_HSVEB PROBABLE HERPESVIRUS TYPE 1(ISOLATE 341– PROCESSING HVS25A) 375 AND TRANSPORT PROTEIN PIC18_HSVSAPROBABLE HERPESVIRUS SAIMIRI (STRAIN 11)  58– 361– PROCESSING 99 395 ANDTRANSPORT PROTEIN PIC18_MCMVS PROBABLE MURINE CYTOMEGALOVIRUS  60– 290–647– PROCESSING (STRAIN SMITH) 112 340 691 AND TRANSPORT PROTEINPIC18_PRV1F PROBABLE PSEUDORABIES VIRUS 299– 303– PROCESSING (STRAININDIANA-FUNKHAUSER / BECKE 333 337 AND TRANSPORT PROTEIN PICP0_HSVBJTRANS-ACTING BOVINE HERPESVIRUS TYPE 1 190– TRANSCRIPTIONAL (STRAINJURA) 224 PROTEIN ICPO PICP0_HSVBK TRANS-ACTING BOVINE HERPESVIRUS TYPE1 190– TRANSCRIPTIONAL (STRAIN K22) 224 PROTEIN ICPO PICP4_HSVMOTRANS-ACTING MAREK'S DISEASE HERPESVIRUS 1022–  TRANSCRIPTIONAL (STRAINGA) 1056 ACTIVATOR PR PICP4_VZVD TRANS-ACTING VARICELLA-ZOSTER VIRUS920– TRANSCRIPTIONAL (STRAIN DUMAS) 954 PROTEIN ICP4 PIE63_HCMVATRANSCRIPTIONAL HUMAN CYTOMEGALOVIRUS 207– REGULATOR IE63 (STRAIN AD169)241 HOMOLOG PIE63_HSV11 TRANSCRIPTIONAL HERPES SIMPLEX VIRUS (TYPE 241–REGULATOR IE63 1 / STRAIN 17) 275 PIE63_HSVEB TRANSCRIPTIONAL EQUINEHERPESVIRUS TYPE 1 282– REGULATOR (STRAIN AB4P) 316 IE63 HOMOLOGPIE63_VZVD TRANSCRIPTIONAL VARICELLA-ZOSTER VIRUS 195– 258– REGULATOR(STRAIN DUMAS) 229 306 IE63 HOMOLOG PIE68_HSVE4 IMMEDIATE- EQUINEHERPESVIRUS TYPE 4  87– EARLY (STRAIN 1942) 121 PROTEIN IE68 PIE68_HSVEBIMMEDIATE- EQUINE HERPESVIRUS TYPE 1  99– EARLY (STRAIN AB4P) 133PROTEIN E68 PIE68_HSVSA IMMEDIATE- HERPESVIRUS SAIMIRI (STRAIN 11)  48–EARLY 85 PROTEIN PIR05_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS  13–PROTEIN IRLS (STRAIN AD169) 47 PIR12_HCMVA HYPOTHETICAL HUMANCYTOMEGALOVIRUS  74– PROTEIN IRL12 (STRAIN AD169) 162 PKABL_FSVHYTYROSINE- FELINE SARCOMA VIRUS 280– PROTEIN (STRAIN HARDY-ZUCKERMAN 2)314 KINASE TRANSFORMING PROT PKABL_MLVAB TYROSINE- ABELSON MURINELEUKEMIA VIRUS 217– PROTEIN 251 KINASE TRANSFORMING PROT PKAKT_MLVAT AKTAKT8 MURINE LEUKEMIA VIRUS 172– 263– KINASE 227 304 TRANSFORMING PROTEINPKFES_FSVGA TYROSINE- FELINE SARCOMA VIRUS  23– 104– PROTEIN (STRAINGARDNER-ARNSTEIN) 64 178 KINASE TRANSFORMING PROT PKFGR_FSVGR TYROSINE-FELINE SARCOMA VIRUS 218– PROTEIN (STRAIN GARDNER-RASHEED) 252 KINASETRANSFORMING PROT PKFMS_FSVMD FMS TYROSINE FELINE SARCOMA VIRUS 313–638– 812– KINASE (STRAIN MCDONOUGH) 362 679 849 TRANSFORMING PROTEINPKFPS_AVISP TYROSINE- AVIAN SARCOMA VIRUS (STRAIN  65– PROTEIN PRC11) 99KINASE TRANSFORMING PROT PKFPS_FUJSV TYROSINE- FUJINAMI SARCOMA VIRUS 65– 152– 348– PROTEIN 99 251 398 KINASE TRANSFORMING PROT PKITH_AMEPVTHYMIDINE AMSACTA MOOREI  47– KINASE ENTOMOPOXVIRUS 81 PKITH_CAPVKTHYMIDINE CAPRIPOXVIRUS (STRAIN KS-1  38– KINASE 82 PKITH_EBV THYMIDINEEPSTEIN-BARR VIRUS (STRAIN 228– 431– KINASE B95-8) 262 472 PKITH_HSV11THYMIDINE HERPES SIMPLEX VIRUS (TYPE  90– KINASE 1 / STRAIN 17) 124PKITH_HSV1C THYMIDINE HERPES SIMPLEX VIRUS (TYPE  90– KINASE 1 / STRAINCL101) 124 PKITH_HSV1E THYMIDINE HERPES SIMPLEX VIRUS (TYPE  90– KINASE1 / STRAIN HFEM) 124 PKITH_HSV1K THYMIDINE HERPES SIMPLEX VIRUS (TYPE 90– KINASE 1 / STRAIN KOS) 124 PKITH_HSV1S THYMIDINE HERPES SIMPLEXVIRUS (TYPE  90– KINASE 1 / STRAIN SC16) 124 PKITH_HSV23 THYMIDINEHERPES SIMPLEX VIRUS (TYPE  91– KINASE 2 / STRAIN 333) 125 PKITH_HSVBMTHYMIDINE BOVINE HERPES VIRUS TYPE 3 616– KINASE (STRAIN WC11) 665PKITH_HSVE4 THYMIDINE EQUINE HERPESVIRUS TYPE 4  19– 178– KINASE (STRAIN1942) 53 219 PKITH_HSVEB THYMIDINE EQUINE HERPESVIRUS TYPE 1  19– 178–KINASE (STRAIN AB4P) 53 230 PKITH_HSVF THYMIDINE FELINE HERPESVIRUS(FEL1D 180– KINASE HERPESVIRUS 1) 214 PKITH_HSVMR THYMIDINE MARMOSETHERPESVIRUS  52– KINASE 86 PKITH_HSVSA THYMIDINE HERPES VIRUS SAIMIRI337– KINASE (STRAIN 11) 389 PKITH_PRVN3 THYMIDINE PSEUDORABIES VIRUS(STRAIN N1A-3) 161– KINASE 202 PKMIL_AV1MH MIL SERINE/ AVIAN RETROVIRUSMH2  69– THREONINE- 103 PROTEIN KINASE TRANSF PKR15_HSV11 GENE 15ICTALURID HERPESVIRUS 1 190– PROTEIN 224 KINASE PKR2_HSV11 PROBABLEHERPES SIMPLEX VIRUS (TYPE  57– 281– SERINE/ 1 / STRAIN 17) 91 315THREONINE- PROTEIN KINASE PKR74_HSV11 GENE 74 ICTALURID HERPESVIRUS 1487– 597– PROTEIN 528 631 KINASE PKRAF_MSV36 RAF SERINE/ MURINE SARCOMAVIRUS 3611  11– THREONINE- 45 PROTEIN KINASE TRANSF PKRB1_VACCC 30 KDVACCINIA VIRUS (STRAIN 127– PROTEIN COPENHAGEN) 168 KINASE HOMOLOGPKRB1_VACCV 30 KD VACCINIA VIRUS (STRAIN WR) 127– PROTEIN 168 KINASEHOMOLOG PKRB1_VARV 30 KD VARIOLA VIRUS 123– PROTEIN 171 KINASE HOMOLOGPKRB2_VACCC POSSIBLE VACCINIA VIRUS (STRAIN 147– PROTEIN COPENHAGEN) 181KINASE B12 PKRB2_VACCV POSSIBLE VACCINIA VIRUS (STRAIN WR) 147– PROTEIN181 KINASE B12 PKRF1_VACCC POSSIBLE VACCINIA VIRUS (STRAIN 169– PROTEINCOPENHAGEN) 203 KINASE F10 PKRF1_VACCP POSSIBLE VACCINIA VIRUS (STRAINL-1VP) 136– PROTEIN 170 KINASE F10 PKRF1_VARV POSSIBLE VARIOLA VIRUS169– PROTEIN 203 KINASE F10 PKROS_AVISU ROS TYROSINE AVIAN SARCOMA VIRUS(STRAIN UR2) 111– KINASE 145 TRANSFORMING PROTEIN PKRYK_AVIR3 TYROSINE-AVIAN RETROVIRUS RPL30  15– PROTEIN 66 KINASE TRANSFORMING PROTPKTHY_VACCV THYMIDYLATE VACCINIA VIRUS (STRAIN WR). 135– KINASE (STRAINCOPENHAGEN) 169 PKYES_AVISY TYROSINE- AVIAN SARCOMA VIRUS (STRAIN Y73)174– PROTEIN 233 KINASE TRANSFORMING PROT PL100_ADE02 LATE 100 KD HUMANADENOVIRUS TYPE 1 441– PROTEIN 475 PL100_ADE05 LATE 100 KD HUMANADENOVIRUS TYPE 5 223– PROTEIN 264 PL100_ADE40 LATE 100 KD HUMANADENOVIRUS TYPE 40 191– 408– PROTEIN 232 442 PL100_ADE41 LATE 100 KDHUMAN ADENOVIRUS TYPE 41 199– PROTEIN 233 PL52_ADE02 LATE L1 52 KD HUMANADENOVIRUS TYPE 2 238– 301– PROTEIN 284 349 PL52_ADE05 LATE L1 52 KDHUMAN ADENOVIRUS TYPE 5 238– 301– PROTEIN 284 349 PLMP2_EBV GENETERMINAL EPSTEIN-BARR VIRUS (STRAIN 144– 294– PROTEIN B95-8) 179 338PMCEL_SFVKA MRNA CAPPING SHOPE FIBROMA VIRUS (STRAIN  54– 622– ENZYMEKASZA) 152 656 PMCEL_VACCC MRNA CAPPING VACCINIA VIRUS (STRAIN  1– 623–ENZYME COPENHAGEN) 41 657 PMCEL_VACCV MRNA CAPPING VACCINIA VIRUS(STRAIN WR)  1– 623– ENZYME 41 657 PMCEL_VARV MRNA CAPPING VARIOLA VIRUS 1– 623– ENZYME 39 657 PMCES_VACCC MRNA CAPPING VACCINIA VIRUS (STRAIN 72– 245– ENZYME COPENHAGEN) 137 286 PMCES_VACCV MRNA CAPPING VACCINIAVIRUS (STRAIN WR)  72– 245– ENZYME 137 286 PMCES_VARV MRNA CAPPINGVARIOLA VIRUS  72– 245– ENZYME 137 286 PMCE_ASFB7 MRNA CAPPING AFRICANSWINE FEVER VIRUS 116– 279– 738– ENZYME (STRAIN BA71V) 157 313 772PMOVP_ORSV MOVEMENT ODONTOGLOSSUM RINGSPOT VIRUS  53– PROTEIN 90PMOVP_PPMVS MOVEMENT PEPPER MILD MOTTLE VIRUS  26– PROTEIN (STRAINSPAIN) 66 PMOVP_TMGMV MOVEMENT TOBACCO MILD GREEN MOSAIC  29– PROTEINVIRUS (TMV STRAIN U2) 66 PMOVP_TMVTO MOVEMENT TOBACCO MOSAIC VIRUSPROTEIN (STRAIN TOMATO/L) PMOVP_TOMVA MOVEMENT TOMATO MOSAIC VIRUS(STRAIN  32– PROTEIN L11A) 66 PMOVP_TOMVL MOVEMENT TOMATO MOSAIC VIRUS(STRAIN  32– PROTEIN L11) 80 PMTC1_CHVN1 MODIFICATION CHLORELLA VIRUSNC-1A 222– METHYLASE 256 CVIB1 PMTC2_CHVP1 MODIFICATION PARAMECIUMBURSARIA 116– METHYLASE CHLORELLA VIRUS 1 164 CVIAII PMYC_AVIM2 MYCTRANSFORMING AVIAN MYELOCYTOMATOSIS 229– 375– PROTEIN VIRUS CM11 266 419PMYC_AVIMC MYC TRANSFORMING AVIAN MYELOCYTOMATOSIS 230– 376– PROTEINVIRUS MC29 267 420 PMYC_AVIMD MYC TRANSFORMING AVIAN MYELOCYTOMATOSIS230– 376– PROTEIN VIRUS HB1 267 420 PMYC_AVIME MYC TRANSFORMING AVIANRETRO VIRUS MH2E21 377– PROTEIN 421 PMYC_AVIOX MYC TRANSFORMING AVIANRETROVIRUS OK10 224– 370– PROTEIN 261 414 PMYC_FLV MYC TRANSFORMINGFELINE LEUKEMIA VIRUS 393– PROTEIN 437 PMYC_FLVTT MYC TRANSFORMINGFELINE LEUKEMIA PROVIRUS FTT 393– PROTEIN 437 PNCA2_CVMA5 NUCLEOCAPSIDMURINE CORONA VIRUS MHV  12– PROTEIN (STRAIN A59) 46 PNCAP_AINOVNUCLEOCAPSID AINO VIRUS 177– PROTEIN 211 PNCAP_BEV NUCLEOCAPSID BERNEVIRUS  46– 122– PROTEIN 83 156 PNCAP_BRSVA NUCLEOCAPSID BOVINERESPIRATORY SYNCYTIAL  62– 163– 248– 343– PROTEIN VIRUS (STRAIN A51908)108 200 303 383 PNCAP_BUNGE NUCLEOCAPSID BUNYAVIRUS GERMISTON 176–PROTEIN 228 PNCAP_BUNLC NUCLEOCAPSID BUNYAVIRUS LA CROSSE 176– PROTEIN229 PNCAP_BUNSH NUCLEOCAPSID BUNYAVIRUS SNOWSHOE HARE 176– PROTEIN 229PNCAP_BUNYW NUCLEOCAPSID BUNYAMWERA VIRUS 175– PROTEIN 228 PNCAP_CCHFVNUCLEOCAPSID CRIMEAN-CONGO HEMORRHAGIC 223– 427– PROTEIN FEVER VIRUS(ISOLATE C6803 306 461 PNCAP_COVO NUCLEOCAPSID CANINE DISTEMPER VIRUS137– 179– 354– PROTEIN (STRAIN ONDERSTEPOORT) 174 217 402 PNCAP_CHAVNUCLEOCAPSID CHANDIPURA VIRUS (STRAIN  40– 321– PROTEIN I653514) 84 369PNCAP_CVBF NUCLEOCAPSID BOVINE CORONA VIRUS (STRAIN F15) 349– PROTEIN383 PNCAP_CVBM NUCLEOCAPSID BOVINE CORONA VIRUS (STRAIN 349– PROTEINMEBUS) 383 PNCAP_CVCAE NUCLEOCAPSID CANINE ENTERIC CORONA VIRUS 165–PROTEIN (STRAIN K378) 227 PNCAP_CVHOC NUCLEOCAPSID HUMAN CORONA VIRUS(STRAIN 349– PROTEIN OC43) 383 PNCAP_CVMJH NUCLEOCAPSID MURINE CORONAVIRUS MHV  12– PROTEIN (STRAIN HIM) 46 PNCAP_CVPFS NUCLEOCAPSID PORCINETRANSMISSIBLE 149– PROTEIN GASTROENTERITIS CORONA 206 VIRUS (SPNCAP_CVPPU NUCLEOCAPSID PORCINE TRANSMISSIBLE 165– PROTEINGASTROENTERITIS CORONA 227 VIRUS (S PNCAP_CVPR8 NUCLEOCAPSID PORCINERESPIRATORY CORONA VIRUS 149– PROTEIN (STRAIN 86/137004 / BRIT 228PNCAP_CVPRM NUCLEOCAPSID PORCINE RESPIRATORY CORONA 149– PROTEIN VIRUS(STRAIN RM4) 228 PNCAP_CVRSD NUCLEOCAPSID RAT CORONA VIRUS (STRAIN 681) 12– PROTEIN 46 PNCAP_CVTXE NUCLEOCAPSID TURKEY ENTERIC CORONA VIRUS349– PROTEIN 383 PNCAP_DUGBV NUCLEOCAPSID DUGBE VIRUS 230– PROTEIN 306PNCAP_FIPV NUCLEOCAPSID FELINE INFECTIOUS PERITONITIS 151– PROTEIN VIRUS(STRAIN 79-1146) 206 PNCAP_HANTV NUCLEOCAPSID HANTAAN VIRUS (STRAIN76-118)  1–  40– 333– PROTEIN 35 74 381 PNCAP_HAZVJ NUCLEOCAPSID HAZARAVIRUS (ISOLATE JC280) 233– PROTEIN 297 PNCAP_HR5V1 NUCLEOCAPSID HUMANRESPIRATORY SYNCYTIAL  62– 163– 248– 343– PROTEIN VIRUS (SUBGROUP B /STRAI 145 200 303 380 PNCAP_HRSVA NUCLEOCAPSID HUMAN RESPIRATORYSYNCYTIAL  62– 163– 248– 343– PROTEIN VIRUS (STRAIN A2) 145 200 30) 380PNCAP_IBVG NUCLEOCAPSID AVIAN INFECTIOUS BRONCHITIS 186– PROTEIN VIRUS(STRAIN GRAY) 222 PNCAP_IBVK NUCLEOCAPSID AVIAN INFECTIOUS BRONCHITIS186– PROTEIN VIRUS (STRAIN KB8523) 220 PNCAP_JUNIN NUCLEOCAPSID JUNINARENA VIRUS  96– PROTEIN 151 PNCAP_LASSG NUCLEOCAPSID LASSA VIRUS(STRAIN GA391)  65– 126– PROTEIN 113 174 PNCAP_LASSJ NUCLEOCAPSID LASSAVIRUS (STRAIN JOSIAH)  65– 122– 467– PROTEIN 113 174 504 PNCAP_LDVNUCLEOCAPSID LACTATE DEHYDROGENASE-  3– PROTEIN ELEVATING VIRUS( 40PNCAP_LYCVA NUCLEOCAPSID LYMPHOCYTIC CHORIOMENINGITIS  45– 460– PROTEINVIRUS (STRAIN ARMSTRON 117 497 PNCAP_LYCVW NUCLEOCAPSID LYMPHOCYTICCHORIOMENINGITIS  45–  83– 460– PROTEIN VIRUS (STRAIN WE) 79 117 497PNCAP_MAGV NUCLEOCAPSID MAGUARI VIRUS 175– PROTEIN 228 PNCAP_MEASENUCLEOCAPSID MEASLES VIRUS (STRAIN 188– 363– PROTEIN EDMONSTON) 226 411PNCAP_MEASH NUCLEOCAPSID MEASLES VIRUS (STRAIN HALLE) 188– 363– PROTEIN226 411 PNCAP_MEAS1 NUCLEOCAPSID MEASLES VIRUS (STRAIN IP-J-CA) 188–363– PROTEIN 226 411 PNCAP_MEASY NUCLEOCAPSID MEASLES VIRUS (STRAIN 138–363– PROTEIN YAMAGATA-1) 226 411 PNCAP_MOPE1 NUCLEOCAPSID MOPEIA VIRUS 65– 471– PROTEIN 106 505 PNCAP_MUMP1 NUCLEOCAPSID MUMPS VIRUS (STRAINSBL-1) 214– 500– PROTEIN 255 534 PNCAP_MUMPM NUCLEOCAPSID MUMPS VIRUS(STRAIN 214– PROTEIN MIYAHARA VACCINE) 255 PNCAP_PHV NUCLEOCAPSIDPROSPECT HILL VIRUS  1–  10– 337– PROTEIN 35 74 392 PNCAP_P11HCNUCLEOCAPSID HUMAN PARAINFLUENZA 1 VIRUS 212– 441– PROTEIN (STRAIN C39)272 510 PNCAP_P11HW NUCLEOCAPSID HUMAN PARAINFLUENZA 1 VIRUS 212– 441–PROTEIN (STRAIN WASHINGTON/1957) 272 510 PNCAP_P12HT NUCLEOCAPSID HUMANPARAINFLUENZA 2 VIRUS 214– 344– PROTEIN (STRAIN TOSHIBA) 266 378PNCAP_P13B NUCLEOCAPSID BOVINE PARAINFLUENZA 3 VIRUS 200– 446– PROTEIN403 400 PNCAP_P13H4 NUCLEOCAPSID HUMAN PARAINFLUENZA 3 VIRUS  87– 208–344.40) 440– PROTEIN (STRAIN NIH 47885) 135 266 491 PNCAP_P14HANUCLEOCAPSID HUMAN PARAINFLUENZA 4A  58– 191– PROTEIN VIRUS (STRAINTOSHIBA) 94 267 PNCAP_P14HB NUCLEOCAPSID HUMAN PARAINFLUENZA 4A  58–191– PROTEIN VIRUS (STRAIN 68-333) 94 267 PNCAP_P1ARV NUCLEOCAPSIDPICHINDE ARENA VIRUS  65– PROTEIN 112 PNCAP_P1RYV NUCLEOCAPSID PIRYVIRUS  71– 325– PROTEIN 116 359 PNCAP_PUUMH NUCLEOCAPSID PUUMALA VIRUS(STRAIN  1–  40– 337– PROTEIN HALLNAS B1) 35 75 392 PNCAP_PUUMSNUCLEOCAPSID PUUMALA VIRUS (STRAIN  1–  40– 337– PROTEIN SOTKAMO) 35 75385 PNCAP_PVM NUCLEOCAPSID PNEUMONIA VIRUS OF MICE  93– 248– 344–PROTEIN 141 30) 388 PNCAP_RABVA NUCLEOCAPSID RABIES VIRUS (STRAIN AVO1)133– PROTEIN 167 PNCAP_SEND5 NUCLEOCAPSID SENDAI VIRUS (STRAIN Z / 212–345– PROTEIN HOST MUTANTS) 272 404 PNCAP_SENDE NUCLEOCAPSID SENDAI VIRUS(STRAIN ENDERS) 212– 345– PROTEIN 272 404 PNCAP_SENDZ NUCLEOCAPSIDSENDAI VIRUS (STRAIN Z) 212– 345– PROTEIN 272 408 PNCAP_SEOUSNUCLEOCAPSID SEOUL VIRUS (STRAIN SR-11)  1–  40– 333– PROTEIN 35 74 381PNCAP_SV41 NUCLEOCAPSID SIMIAN VIRUS 41 215– 372– 418– PROTEIN 267 406466 PNCAP_SYNV NUCLEOCAPSID SONCHUS YELLOW NET VIRUS 332– PROTEIN 366PNCAP_TACV NUCLEOCAPSID TACARIBE VIRUS  50– 230– PROTEIN 84 264PNCAP_TOSV NUCLEOCAPSID TOSCANA VIRUS 215– PROTEIN 249 PNCAP_TSWVBNUCLEOCAPSID TOMATO SPOTTED WILT VIRUS  79– PROTEIN (BRAZILIAN ISOLATECPNH1/BR 120 PNCAP_TSWVH NUCLEOCAPSID TOMATO SPOTTED WILT VIRUS  79–PROTEIN (HAWAIIAN ISOLATE) 120 PNCAP_TSWVL NUCLEOCAPSID TOMATO SPOTTEDWILT VIRUS  79– PROTEIN (STRAIN L3) 120 PNCAP_UUK NUCLEOCAPSID UUKUNIEMIVIRUS  51– PROTEIN 102 PNCAP_VHSV0 NUCLEOCAPSID VIRAL HEMORRHAGICSEPTICEMIA 249– PROTEIN VIRUS (STRAIN 07-71) 325 PNCAP_VHSVMNUCLEOCAPSID VIRAL HEMORRHAGIC SEPTICEMIA 142– 249– PROTEIN VIRUS(STRAIN MAKAH) 180 325 PNCAP_VSVTG NUCLEOCAPSID VESICULAR STOMATITISVIRUS  42– PROTEIN (SEROTYPE INDIANA / STRAIN G 108 PNCAP_VSVJONUCLEOCAPSID VESICULAR STOMATITIS VIRUS  67– PROTEIN (SEROTYPE NEWJERSEY / STRA 115 PNCAP_VSVSJ NUCLEOCAPSID VESICULAR STOMATITIS VIRUS 42– PROTEIN (STRAIN SAN JUAN) 115 PNEF_HV2BE NEGATIVE HUMANIMMUNODEFICIENCY  7– FACTOR VIRUS TYPE 2 (ISOLATE BEN) 48 PNEF_HV2D1NEGATIVE HUMAN IMMUNODEFICIENCY  7– FACTOR VIRUS TYPE 1 (ISOLATE D194)41 PNEF_HV2RO NEGATIVE HUMAN IMMUNODEFICIENCY 112– FACTOR VIRUS TYPE 2(ISOLATE ROD) 160 PNEF_HV2SB NEGATIVE HUMAN IMMUNODEFICIENCY VIRUS 109–FACTOR TYPE 2 (ISOLATE SBLISY) 150 PNEF_HV2ST NEGATIVE HUMANIMMUNODEFICIENCY 108– FACTOR VIRUS TYPE 2 (ISOLATE ST) 149 PNEF_SIVA1NEGATIVE SIMIAN IMMUNODEFICIENCY VIRUS  96– FACTOR (ISOLATE AGM / CLONEGR 140 PNEF_SIVS4 NEGATIVE SIMIAN IMMUNODEFICIENCY  9– 233– FACTOR VIRUS(F236/SMH4 ISOLATE) 43 267 PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS(STRAIN  47– A/BLACK DUCK/AUSTRALIA/702/78 81 PNRAM_IACAO NEURAMINIDASEINFLUENZA A VIRUS (STRAIN  33– A/CAMEL/MONGOLIA/82) 74 PNRAM_IACHINEURAMINIDASE INFLUENZA A VIRUS (STRAIN  50– A/CHILE/1/83) 91PNRAM_IACKQ NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 349–A/CHICKEN/PENNSYLVANIA/1370/ 383 PNRAM_IACKR NEURAMINIDASE INFLUENZA AVIRUS (STRAIN 349– A/CHICKEN/PENNSYLVANIA/8125/ 383 PNRAM_IADGENEURAMINIDASE INFLUENZA A VIRUS (STRAIN  14– A/DUCK/GERMANY/49) 48PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN  14– 194– A/FOWLPLAGUE VIRUS/WEYBRID 48 229 PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS(STRAIN  10– 193– A/EQUINE/COR/16/74 47 227 PNRAM_IAHKI NEURAMINIDASEINFLUENZA A VIRUS (STRAIN  5– 361– A/EQUINE/KENTUCKY/1/81) 44 402PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN  50–   –A/KIEV/59/79) 91 PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 50– A/LENINGRAD/54/1) 91 PNRAM_IAMEI NEURAMINIDASE INFLUENZA A VIRUS(STRAIN  50– A/MEMPHIS/1/71H-A/BELLAMY/42N 88 PNRAM_IARUE NEURAMINIDASEINFLUENZA A VIRUS (STRAIN  49– A/RUDDY TURNSTONE/NEW JERSE 91PNRAM_IASH2 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN  10–A/SHEARWATER/AUSTRALIA/72) 44 PNRAM_IATKR NEURAMINIDASE INFLUENZA AVIRUS (STRAIN  7– A/TURKEY/OREGON/71) 41 PNRAM_IATRA NEURAMINIDASEINFLUENZA A VIRUS (STRAIN  49– A/TERN/AUSTRALIA/G70C/75) 83 PNRAM_IAUSSNEURAMINIDASE INFLUENZA A VIRUS (STRAIN  50– AA/USSR/90/77) 91PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN  49–A/WHALE/MAINE/1/84) 91 PNRAM_INBBE NEURAMINIDASE INFLUENZA B VIRUS(STRAIN  5– 348– B/BEIJING/1/87) 46 382 PNRAM_INBHK NEURAMINIDASEINFLUENZA B VIRUS (STRAIN  5– 349– B/HONG KONG/8/73) 46 383 PNRAM_INBLENEURAMINIDASE INFLUENZA B VIRUS (STRAIN  5– 349– B/LEE/40) 46 383PNRAM_INBLN NEURAMINIDASE INFLUENZA B VIRUS (STRAIN  5– 348–B/LENINGRAD/179/86).(STRAIN B/M 39 382 PNRAM_INBMD NEURAMINIDASEINFLUENZA B VIRUS (STRAIN  5– 349– B/MARYLAND/59) 39 383 PNRAM_INBMFNEURAMINIDASE INFLUENZA B VIRUS (STRAIN  5– 348– B/MEMPHIS/3/89) 46 382PNRAM_INBOR NEURAMINIDASE INFLUENZA B VIRUS (STRAIN  5– 349–B/OREGON/5/80) 46 383 PNRAM_INBS1 NEURAMINIDASE INFLUENZA B VIRUS(STRAIN  5– 349– B/SINGAPORE/222/79) 39 383 PNRAM_INBUS NEURAMINIDASEINFLUENZA B VIRUS (STRAIN  5– 349– B/USSR/100/83) 39 383 PNRAM_INBV1NEURAMINIDASE INFLUENZA B VIRUS (STRAIN  5– 348– B/VICTORIA/3/85 39 382PNS2_SIDEV PROBABLE BOMBYX DENSONUCLEOSIS VIRUS 790– STRUCTURAL 828PROTEIN PRECURSOR PNSS_INSVN NON-STRUCTURAL IMPATIENS NECROTIC SPOT  95–204– PROTEIN VIRUS (STRAIN NL-07) 129 238 PNSS_TSWVB NON-STRUCTURALTOMATO SPOTTED WILT VIRUS  3– PROTEIN (BRAZILIAN ISOLATE CPNH1/BR 37PNSS_TSWVL NON-STRUCTURAL TOMATO SPOTTED WILT VIRUS  3– PROTEIN (STRAINL3) 37 PNTP1_AMEPV NUCLEOSIDE AMSACTA MOOREI  28– 110– TRIPHOSPHATASE1ENTOMOPOXVIRUS 69 144 PNTP1_CBEPV NUCLEOSIDE CHORISTONEURA BIENNIS 122–415– 514– TRIPHOSPHATASE1 ENTOMOPOXVIRUS 169 449 555 PNTP1_VACCCNUCLEOSIDE VACCINIA VIRUS (STRAIN  56– 248– 549– TRIPHOSPHATASE1COPENHAGEN) 90 289 599 PNTP1_VACCV NUCLEOSIDE VACCINIA VIRUS (STRAIN WR) 56– 248– 549– TRIPHOSPHATASE 1 90 289 599 PNTP1_VARV NUCLEOSIDE VARIOLAVIRUS 154– 455– TRIPHOSPHATASE I 195 505 PP100_HSV6U MAJOR HERPESSIMPLEX VIRUS (TYPE 189– 689– ANTIGENIC 6 / STRAIN UGANDA-1102) 223 735STRUCTURAL PROTEIN PPAP1_VACCC POLY(A) VACCINIA VIRUS (STRAIN 121–POLYMERASE COPENHAGEN) 180 CATALYTIC SUBUNIT PPAP1_VACCV POLY(A)VACCINIA VIRUS (STRAIN WR) 121– POLYMERASE 180 CATALYTIC SUBUNITPPAP1_VARV POLY(A) VARIOLA VIRUS 121– POLYMERASE 180 CATALYTIC SUBUNITPPAP2_CAPVK POLY(A) CAPRIPOXVIRUS (STRAIN KS-1) 112– POLYMERASE 146REGULATORY SUBUNIT PPAP1_FOWPV POLY(A) FOWLPOX VIRUS  95– POLYMERASE 154REGULATORY SUBUNIT PPAP2_VACCC POLY(A) VACCINIA VIRUS (STRAIN 203–POLYMERASE COPENHAGEN) 249 REGULATORY SUBUNIT PPAP2_VACCV POLY(A)VACCINIA VIRUS (STRAIN WR) 203– POLYMERASE 249 REGULATORY SUBUNITPPAP2_VARV POLY(A) VARIOLA VIRUS 203– POLYMERASE 249 REGULATORY SUBUNITPPE12_NPVAC 12.1 KD AUTOGRAPHA CALIFORNICA  15–  60– PROTEIN IN NUCLEARPOLYHEDROSIS VIRUS 56 105 PE 5′REGION PPE12_NPVOP 11.5 KD ORGYIAPSEUDOTSUGATA  11– PROTEIN IN P26 MULTICAPSID POLYHEDROSIS 98 5′REGIONVIRUS PPE38_NPVAC MAJOR AUTOGRAPHA CALIFORNICA  19– 197– (IMMEDIATENUCLEAR POLYHEDROSIS VIRUS 77 249 EARLY PROTEIN PPE38_NPVOP MAJOR ORGYIAPSEUDOTSUGATA 190– IMMEDIATE MULTICAPSID POLYHEDROSIS 240 EARLY VIRUSPROTEIN PPE48_NPVAC 48.3 KD AUTOGRAPHA CALIFORNICA  4–  48–  97– PROTEININ NUCLEAR POLYHEDROSIS VIRUS 42 89 131 PE-P26 INTERGENIC REGIONPPE48_NPVOP 47.3 KD ORGYIA PSEUDOTSUGATA  47– 165– PROTEIN INMULTICAPSID POLYHEDROSIS 82 199 PE-P26 VIRUS INTERGENIC REGIONPPIV2_ADE07 MATURATION HUMAN ADENOVIRUS TYPE 7 414– PROTEIN 448PPIV6_ADE02 PROTEIN VI HUMAN ADENOVIRUS TYPE 2  37– PRECURSOR 71PPIV6_ADE05 PROTEIN VI HUMAN ADENOVIRUS TYPE 5  37– PRECURSOR 71PPOL1_BAYMG GENOME BARLEY YELLOW MOSAIC VIRUS 329– 743– 957– 1265– 2229– 2309– 2368– POLYPROTEIN 1 (GERMAN ISOLATE) 363 777 991 1299 22662352 2404 PPOL1_BAYMJ GENOME BARLEY YELLOW MOSAIC VIRUS 329– 673– 743–957.994 1265– 2227– 2307– 2366– POLYPROTEIN 1 (JAPANESE STRAIN 11-1) 363705 777 1299 2264 2350 2402 PPOL1_GCMV RNA1 HUNGARIAN GRAPEVINE CHROME120– 165– 230– 377– POLYPROTEIN MOSAIC VIRUS 161 216 273 415 PPOL1_GFLVRNA1 GRAPEVINE FANLEAF VIRUS 170– 480– 636– 691– 1157– 1378– 1906–POLYPROTEIN 212 519 677 725 1196 1412 1943 PPOL1_TBRVS RNA1 TOMATO BLACKRING VIRUS 223– 929– POLYPROTEIN (STRAIN S) 270 977 PPOL1_TRSVR RNA1TOMATO RINGSPOT VIRUS 161– POLYPROTEIN (ISOLATE RASPBERRY) 206PPOL2_BAYMG GENOME BARLEY YELLOW MOSAIC VIRUS 240– 669– 739– 787–POLYPROTEIN 2 (GERMAN ISOLATE) 281 732 773 828 PPOL2_BAYMJ GENOME BARLEYYELLOW MOSAIC VIRUS 669– 739– 787– POLYPROTEIN 2 (JAPANESE STRAIN 11-1)732 773 828 PPOL2_GFLV RNA2 GRAPEVINE FANLEAF VIRUS 365– 542–POLYPROTEIN 406 602 PPOL2_TBRVS RNA2 TOMATO BLACK RING VIRUS  4–POLYPROTEIN (STRAIN S) 38 PPOL2_TRSVR RNA2 TOMATO RINGSPOT VIRUS 158–334– POLYPROTEIN (ISOLATE RASPBERRY) 206 368 PPOLG_BOVEV GENOME BOVINEENTEROVIRUS (STRAIN 849– 1008–  1382–  1459–  1576– POLYPROTEIN VG-5-27)886 1064 1416 1507 1617 PPOLG_BVDVN GENOME BOVINE VIRAL DIARRHEA VIRUS244– 446– 629– 1033–  1303– 1392– 1869– 2226– POLYPROTEIN (ISOLATE NADL)289 491 663 1074 1344 1443 1910 2260 PPOLG_BVDVS GENOME BOVINE VIRALDIARRHEA VIRUS 245– 446– 629– 1033–  1303– 1392– 1779– 2136– POLYPROTEIN(STRAIN SD-1) 289 491 663 1074 1344 1443 1820 2170 PPOLG_BYMV GENOMEBEAN YELLOW MOSAIC VIRUS  96– POLYPROTEIN 130 PPOLG_COXA2 GENOMECOXSACKIE VIRUS A21 (STRAIN COE)  9– 562– 664– 1045–  1498– 1607– 1805–1901– POLYPROTEIN 43 596 698 1100 1546 1648 1839 1946 PPOLG_COXA9 GENOMECOXSACKIE VIRUS A9 (STRAIN  15– 1040–  1895–  POLYPROTEIN GRIGGS) 491086 1940 PPOLG_COXB1 GENOME COXSACKIE VIRUS B1  15– 1021–  1876– POLYPROTEIN 49 1067 1921 PPOLG_COXB3 GENOME COXSACKIE VIRUS B3  15–1024–  1879–  POLYPROTEIN 49 1070 1924 PPOLG_COXB4 GENOME COXSACKIEVIRUS B4  15– 642– 1022–  1877–  POLYPROTEIN 49 681 1068 1922PPOLG_COXB5 GENOME COXSACKIE VIRUS B5  15– 1024–  1879–  POLYPROTEIN 491070 1924 PPOLG_CYVV GENOME CLOVER YELLOW VEIN VIRUS 120– POLYPROTEIN154 PPOLG_DEN18 GENOME DENGUE VIRUS TYPE 1 (STRAIN 836-1)  74–POLYPROTEIN 108 PPOLG_DEN1A GENOME DENGUE VIRUS TYPE 1 (STRAIN  74–POLYPROTEIN AHF 82-80) 108 PPOLG_DEN1C GENOME DENGUE VIRUS TYPE 1(STRAIN  74– POLYPROTEIN CV1636/77) 108 PPOLG_DEN1S GENOME DENGUE VIRUSTYPE 1 (STRAIN  74– 832– 960– 1142–  1386– 1614– 2518– 2946– POLYPROTEINSINGAPORE S275/90) 108 873 994 1179 1420 1648 2554 3016 PPOLG_DEN1WGENOME DENGUE VIRUS TYPE 1 (STRAIN  74– 833– 961– 1143–  POLYPROTEINWESTERN PACIFIC) 108 874 995 1180 PPOLG_DEN21 GENOME DENGUE VIRUS TYPE 2448– POLYPROTEIN (ISOLATE MALAYSIA ML) 492 PPOLG_DEN22 GENOME DENGUEVIRUS TYPE 2 448– POLYPROTEIN (ISOLATE MALAYSIA M2) 495 PPOLG_DEN26GENOME DENGUE VIRUS TYPE 2 (STRAIN  74– 728– 961– 1146–  1246– 1418–1615– 2517– POLYPROTEIN 16681) 108 777 995 1180 1280 1452 1649 2551PPOLG_DEN27 GENOME DENGUE VIRUS TYPE 2 (STRAIN  74– 728– 961– 1146– 1246– 1418– 1615– 2485– POLYPROTEIN 16681-PDK53) 108 777 995 1180 12801452 1649 2551 PPOLG_DEN2D GENOME DENGUE VIRUS TYPE 2 (STRAIN D2-04)728– POLYPROTEIN 777 PPOLG_DEN2H GENOME DENGUE VIRUS TYPE 2 (STRAINTH-36) 497– POLYPROTEIN 546 PPOLG_DEN2J GENOME DENGUE VIRUS TYPE 2(STRAIN  74– 728– 961– 1146–  1246– 1418– 1615– 2517– POLYPROTEINJAMAICA) 108 777 995 1180 1280 1452 1649 2551 PPOLG_DEN2N GENOME DENGUEVIRUS TYPE 2 (STRAIN NEW GUINEA C) 213– 398– POLYPROTEIN 247 432PPOLG_DEN2P GENOME DENGUE VIRUS TYPE 2 (STRAIN PR159/S1)  74– 728– 832–961– 1146– 1246– 1418– 1615– POLYPROTEIN 108 777 875 995 1180 1280 14521649 PPOLG_DEN2T GENOME DENGUE VIRUS TYPE 2 (STRAIN 448– 552– 681– 866– 966– 1205– POLYPROTEIN TONGA 1974) 497 595 715 900 1000 1239PPOLG_DEN2U GENOME DENGUE VIRUS TYPE 2 (STRAIN 614– POLYPROTEIN PUO-218)663 PPOLG_DEN3 GENOME DENGUE VIRUS TYPE 3 830– 959– 1385–  2224–  2480–2704– 2940– 2980– POLYPROTEIN 872 993 1419 2258 2521 2738 2978 3014PPOLG_DEN4 GENOME DENGUE VIRUS TYPE 4 957– 1380–  2514–  2701–  2941–2977– POLYPROTEIN 993 1414 2555 2735 2975 3011 PPOLG_EC11G GENOMEECHOVIRUS 11 (STRAIN 213– 1079–  POLYPROTEIN GREGORY) 259 1113PPOLG_EMCV GENOME ENCEPHALOMYOCARDITIS VIRUS 1074–  1472–  1522–  1665– 1789– POLYPROTEIN 1115 1518 1570 1706 1823 PPOLG_EMCVB GENOMEENCEPHALOMYOCARDITIS VIRUS 145– 1076–  1474–  1524–  1667– POLYPROTEIN(STRAIN EMC-B NONDIABETO 179 1117 1520 1572 1708 PPOLG_EMCVD GENOMEENCEPHALOMYOCARDITIS VIRUS 145– 1076–  1474–  1524–  1667– POLYPROTEIN(STRAIN EMC-D DIABETOGEN 179 1117 1520 1572 1708 PPOLG_ENMG3 GENOMEMENGO ENCEPHALOMYOCARDITIS 145– POLYPROTEIN VIRUS (STRAIN 37A) 179PPOLG_ENMGO GENOME MENGO ENCEPHALOMYOCARDITIS  78– POLYPROTEIN VIRUS 112PPOLG FMDV1 GENOME FOOT-AND-MOUTH DISEASE VIRUS 221– 294– 578– 1103– 1493– 2165– POLYPROTEIN (STRAIN A10-61) 255 328 612 1153 1528 2200PPOLG_FMDVA GENOME FOOT-AND-MOUTH DISEASE VIRUS 220– 293– 577– 1103– 1493– 2164– POLYPROTEIN (STRAIN A12) 254 327 611 1164 1528 2199PPOLG_FMDVO GENOME FOOT-AND-MOUTH DISEASE VIRUS 221– 1103–  1493– 2164–  POLYPROTEIN (STRAINS O1K AND O1BFS) 255 1153 1528 2199PPOLG_FMDVS GENOME FOOT-AND-MOUTH DISEASE VIRUS  87– 693– POLYPROTEIN(STRAIN C1-SANTA PAU [C-S 128 728 PPOLG_FMDVT GENOME FOOT-AND-MOUTHDISEASE 221– 283– 577– POLYPROTEIN VIRUS (STRAIN C1) 255 317 611PPOLG_HCV1 GENOME HEPATITIS C VIRUS (ISOLATE 1) 364– POLYPROTEIN 398PPOLG_HCVA GENOME HOG CHOLERA VIRUS (STRAIN 440– 626– 695– 1033–  1190–1307– 1779– 2136– POLYPROTEIN ALFORT) 493 660 729 1070 1235 1343 18202170 2466–  2525–  2667–  3057–  3152– 3406– 2500 2559 2708 3098 31933440 PPOLG_HCVB GENOME HOG CHOLERA VIRUS (STRAIN 440– 626– 695– 1033– 1173– 1779– 2136– 2388– POLYPROTEIN BRESCIA) 493 660 729 1070 1235 18202170 2436 PPOLG_HCVBK 2466–  2525–  2667–  3057–  3152– 3406– 3521– 25002559 2708 3098 3195 3440 3562 PPOLG_HCVEO GENOME HEPATITIS C VIRUS(ISOLATE BK) 357– 2328–  POLYPROTEIN 398 2365 PPOLG_HCVH GENOMEHEPATITIS C VIRUS (ISOLATE EC10)  65– POLYPROTEIN 99 PPOLG_HCVH4 GENOMEHEPATITIS C VIRUS (ISOLATE (H) 364– POLYPROTEIN 398 PPOLG_HCVH7 GENOMEHEPATITIS C VIRUS (ISOLATE 364– POLYPROTEIN HCV-476) 398 PPOLG_HCVH8GENOME HEPATITIS C VIRUS (ISOLATE HCT27) 236– POLYPROTEIN 270PPOLG_HCVHK GENOME HEPATITIS C VIRUS (ISOLATE HCT18) 248– POLYPROTEIN282 PPOLG_HCVJ2 GENOME HEPATITIS C VIRUS (ISOLATE HCV-KF) 357–POLYPROTEIN 398 PPOLG_HCVJ5 GENOME HEPATITIS C VIRUS (ISOLATE HC-J2)357– POLYPROTEIN 398 PPOLG_HCVJ6 GENOME HEPATITIS C VIRUS (ISOLATEHC-J5) 364– POLYPROTEIN 398 PPOLG_HCVJ7 GENOME HEPATITIS C VIRUS(ISOLATE HC-16) 364– 1716–  2082–  POLYPROTEIN 401 1750 2116 PPOLG_HCVJ8GENOME HEPATITIS C VIRUS (ISOLATE HC-J7) 364– POLYPROTEIN 398PPOLG_HCVJA GENOME HEPATITIS C VIRUS (ISOLATE HC-J8) 364– 1716–  2082– 2468–  2538– POLYPROTEIN 398 1750 2116 2502 2572 PPOLG_HCVJT GENOMEHEPATITIS C VIRUS (ISOLATE 357– 2331–  POLYPROTEIN JAPANESE) 405 2365PPOLG_HCVTW GENOME HEPATITIS C VIRUS (ISOLATE HC-JT) 357– 2331– POLYPROTEIN 391 2365 PPOLG_HPAV2 GENOME HEPATITIS C VIRUS (ISOLATE 337–2328–  2444–  POLYPROTEIN TAIWAN) 398 2365 2503 PPOLG_HPAV4 GENOMEHEPATITIS A VIRUS (STRAIN 24A)  2– 101– 203– 870– 1021– 1117–POLYPROTEIN 43 135 237 904 1055 1151 PPOLG_HPAV8 GENOME HEPATITIS AVIRUS (STRAIN 43C)  2– 101– 203– 870– 1021– 1117– POLYPROTEIN 43 135 237904 1055 1151 PPOLG_HPAVC GENOME HEPATITIS A VIRUS (STRAIN 18F)  2– 101–203– 870– 1021– 1117– POLYPROTEIN 43 135 237 904 1055 1151 PPOLG_HPAVGGENOME HEPATITIS A VIRUS (STRAIN  2– 101– 203– POLYPROTEIN CR326) 43 135237 PPOLG_HPAVH GENOME HEPATITIS A VIRUS (STRAIN  80– 182– POLYPROTEINGA76) 114 216 PPOLG_HPAVL GENOME HEPATITIS A VIRUS (STRAIN  2– 101– 203–870– 1021– 1103– POLYPROTEIN HM-175) 43 135 237 904 1055 1151PPOLG_HPAVM GENOME HEPATITIS A VIRUS (STRAIN LA)  2– 101– 203– 870–1021– 1103– POLYPROTEIN 43 135 237 904 1055 1151 PPOLG_HPAVS GENOMEHEPATITIS A VIRUS (STRAIN MBB)  2– 101– 203– 870– 1021– 1103–POLYPROTEIN 43 135 237 904 1055 1158 PPOLG_HPAVT GENOME SIMIAN HEPATITISA VIRUS  6– 105– 207– 849– 1025– 1115– 1158– POLYPROTEIN (STRAIN AGM-27)47 139 241 908 1059 1155 1198 PPOLG_HRV14 GENOME SIMIAN HEPATITIS AVIRUS  2– 101– 203– POLYPROTEIN (STRAIN CY-145) 43 135 237 PPOLG_HRV1AGENOME HUMAN RHINOVIRUS 14 (HRV-14) 1020–  1393–  1479–  1877– POLYPROTEIN 1054 1427 1313 1920 PPOLG_HRV1B GENOME HUMAN RHINOVIRUS 1A(HRV-1A) 362– POLYPROTEIN 396 PPOLG_HRV2 GENOME HUMAN RHINOVIRUS 1B(HRV-1B) 387– 863– 1133–  POLYPROTEIN 421 904 1168 PPOLG_HRV89 GENOMEHUMAN RHINOVIRUS 2 (HRV-2) 856– 1126–  1552–  POLYPROTEIN 897 1169 1593PPOLG_HUEV7 GENOME HUMAN RHINOVIRUS 89 (HRV-89) 1566–  POLYPROTEIN 1607PPOLG_IBDVO GENOME HUMAN ENTEROVIRUS 70 (STRAIN 359– 876– 1032–  1403– 1896– POLYPROTEIN J670/71) 397 917 1088 1441 1934 PPOLG_JAEV1 STRUCTURALAVIAN INFECTIOUS BURSAL 134– 250– 475– POLYPROTEIN DISEASE VIRUS (STRAINOH) 168 291 524 PPOLG_JAEV5 GENOME JAPANESE ENCEPHALITIS VIRUS  74– 211–539– 980– 1409– 2463– 2739– 2782– POLYPROTEIN (STRAIN SA-14) 122 256 5761014 1450 2497 2777 2823 3322–  3387–  3359 3428 PPOLG_JAEV1 GENOMEJAPANESE ENCEPHALITIS VIRUS  74– 211– 539– 980– 1409– 2463– 2739– 2782–POLYPROTEIN (STRAIN SA(V)) 122 256 576 1014 1450 2497 2777 2823 3322– 3387–  3359 3428 PPOLG_JAEVN GENOME JAPANESE ENCEPHALITIS VIRUS  74–211– 539– 980– 1409– 2463– 2739– 2782– POLYPROTEIN (STRAIN JAOARS982)128 256 376 1014 1450 2497 2777 2823 3322–  3387–  3359 3428 PPOLG_KUNJMGENOME JAPANESE ENCEPHALITIS VIRUS  7– 138– 467– 908– 1337– POLYPROTEIN(STRAIN NAKAYAMA) 48 183 504 942 1378 PPOLG_LANVT GENOME KUNJIN VIRUS(STRAIN  74– 207– 851– 2464–  2528– 2740– 3325– 3389– POLYPROTEINMRM61C) 108 251 885 2498 2579 2778 3359 3423 PPOLG_LANVY GENOME LANGATVIRUS (STRAIN TP21)  68– 431– 962– 1431–  1932– 2536– 2967– 3003–POLYPROTEIN 102 465 996 1472 1966 2591 3001 3037 3102–  3145 PPOLG_LIVGENOME LANGAT VIRUS (STRAIN YELANTSEV)  68– 431– POLYPROTEIN 102 465PPOLG_LIVSB GENOME LOUPING ILL VIRUS (LI)  68– 231– 431– POLYPROTEIN 123272 465 PPOLG_MCFA GENOME LOUPING ILL VIRUS (STRAIN 151– POLYPROTEIN SD526) 185 PPOLG_MVEV GENOME MOSQUITO CELL FUSING AGENT  80– 908– 2049– 2630–  3036– 3290– POLYPROTEIN (CFA FLAVIVIRUS) 114 942 2087 2689 30953341 PPOLG_OMV GENOME MURRAY VALLEY ENCEPHALITIS  67– 209– 853– 979–1408– POLYPROTEIN VIRUS 115 253 887 1013 1449 PPOLG_PEMVC GENOMEORNITHOGALUM MOSAIC VIRUS 481– 946– 1072–  POLYPROTEIN 515 954 1106PPOLG_POL1M GENOME PEPPER MOTTLE VIRUS  55– 207– 377– 704–  827–  877–1021– 1167– POLYPROTEIN (CALIFORNIA ISOLATE) 100 248 411 731 862 9471055 1201 1488–  1787–  1948–  2202–  2238– 2805– 3003– 1529 1821 19822236 2310 2839 3037 PPOLG_POL1S GENOME POLIOVIRUS TYPE 1 (STRAIN  9–1046–  1414–  1500–  1806– 1902– POLYPROTEIN MAHONEY) 43 1101 1448 15481840 1947 PPOLG_POL2L GENOME POLIOVIRUS TYPE 1 (STRAIN SABIN)  9– 899–1047–  1415–  1501– 1610– 1801– 1904– POLYPROTEIN 43 933 1102 1449 15491651 1842 1949 PPOLG_POL2W GENOME POLIOVIRUS TYPE 2 (STRAIN  9– 897–1045–  1413–  1502– 1608– 1806– 1902– POLYPROTEIN LANSING) 43 831 11001447 1547 1649 1840 1947 PPOLG_POL32 GENOME POLIOVIRUS TYPE 2 (STRAINW-2)  9– 897– 1045–  1413–  1502– 1608– 1806– 1902– POLYPROTEIN 43 8311100 1447 1547 1649 1840 1947 PPOLG_POL3L GENOME POLIOVIRUS TYPE 3(STRAIN  9– 896– 1044–  1412–  1498– 1607– 1805– 1901– POLYPROTEIN23127) 43 930 1098 1446 1546 1648 1839 1946 PPOLG_PPVD GENOME POLIOVIRUSTYPE 3 (STRAINS  9– 896– 1044–  1412–  1498– 1607– 1805– 1901–POLYPROTEIN P3/LEON/37 AND P3/LEON 43 930 1099 1446 1546 1648 1839 194612A[1]B) PPOLG_PPVEA GENOME PLUM POX POTYVIRUS (STRAIN D) 164– 441– 728–815–  921– 1741– POLYPROTEIN 208 503 769 867 955 1782 PPOLG_PPVNA GENOMEPLUM POX POTYVIRUS (STRAIN 116– 784– 1146–  POLYPROTEIN EL AMAR) 157 8181197 PPOLG_PPVRA GENOME PLUM POX POTYVIRUS (ISOLATE NAT) 164– 403– 440–727–  814–  920– 1740– POLYPROTEIN 208 437 502 768 873 954 1781PPOLG_PRSVH GENOME PLUM POX POTYVIRUS (STRAIN 164– 403– 440– 727–  814– 920– 1740– POLYPROTEIN RANKOVIC) 208 437 502 768 866 954 1781PPOLG_PRSVP GENOME PAPAYA RINGSPOT VIRUS  68– 434– POLYPROTEIN (STRAIN P/ MUTANT HA) 102 468 PPOLG_PRSVW GENOME PAPAYA RINGSPOT VIRUS 325–POLYPROTEIN (STRAIN P / MUTANT HA 5-1) 359 PPOLG_PSBMV GENOME PAPAYARINGSPOT VIRUS 325– POLYPROTEIN (STRAIN W) 359 PPOLG_PVYC GENOME PEASEED-BORNE MOSAIC 253– 355– 529– 935–  984– 1080– 1588– 1808–POLYPROTEIN #Z,899; STRAIN DPD1) 315 389 589 976 1018 1177 1627 18601971–  2379–  2712–  2870–  2015 2413 2746 2907 PPOLG_PVYHU GENOMEPOTATO VIRUS Y (STRAIN C) 131– 701– 802– POLYPROTEIN 196 735 856PPOLG_PVYN GENOME POTATO VIRUS Y (STRAIN 144– 701– 802– 901– 1401– 1492–1728– 1777– POLYPROTEIN HUNGARIAN) 181 735 863 949 1441 1526 772 18182272–  2306 PPOLG_PVYO GENOME POTATO VIRUS Y (STRAIN N) 140– 211– 701–802– 1401– 1492– 1728– 1777– POLYPROTEIN 196 245 735 863 1441 1526 17721818 1929–  1970 PPOLG_PWVSE GENOME POTATO VIRUS Y (STRAIN O) 140– 211–701– 802– POLYPROTEIN 196 245 735 856 PPOLG_PWVTB GENOME PASSIONFRUITWOODINESS 203– POLYPROTEIN VIRUS (STRAIN SEVERE) 237 PPOLG_PYFV1 GENOMEPASSIONFRUIT WOODINESS 203– POLYPROTEIN VIRUS (STRAIN TIP BRIGHT) 237PPOLG_STEVM GENOME PARSNIP YELLOW FLECK VIRUS 194– 1111–  1379–  1858– 1950– 2703– POLYPROTEIN (ISOLATE P-121) 228 1172 1413 1899 1991 2737PPOLG_SVDVH GENOME ST. LOUIS ENCEPHALITIS 106– 673– 739– 975– 1404–POLYPROTEIN VIRUS (STRAIN MS1-7) 143 707 773 1009 1438 PPOLG_SVDVUGENOME SWINE VESICULAR DISEASE  15– 1024–  1779–  1890–  POLYPROTEINVIRUS (STRAIN 11/3/76) 49 1070 1813 1924 PPOLG_TBEVS GENOME SWINEVESICULAR DISEASE  15– 1024–  1890–  POLYPROTEIN VIRUS (STRAINUKG/27/72) 49 1070 1924 PPOLG_TBEVW GENOME TICK-BORNE ENCEPHALITIS  68–231– 431– 1158–  1431– 1929– 2182– 2535– POLYPROTEIN VIRUS (STRAINSOFJIN) 140 272 465 1192 1472 1966 2216 2590 2965–  3051–  3100–  29993092 3143 PPOLG_TEV GENOME TICK-BORNE ENCEPHALITIS  68– 231– 431– 1158– 1431– 1932– 2536– 2967– POLYPROTEIN VIRUS (WESTERN SUBTYPE) 140 272 4651192 1492 1966 2591 3001 3003–  3053–  3102–  3037 3094 3145 PPOLG_TMEVBTHEILER'S TOBACCO ETCH VIRUS  73– 166– 540– 720–  828– 1148– 1416– 1494–MURINE 124 222 584 782 925 1192 1460 1535 ENCEPHALO- MYELITIS VIRUS (S1668–  1747–  1792–  2395–  2787– 1702 1781 1826 2434 2821 PPOLG_TMEVDGENOME THEILER'S MURINE 1306–  1483–  1601–  POLYPROTEINENCEPHALOMYELITIS VIRUS 1340 1518 1635 (STRAIN DEAN PPOLG_TMEVG GENOMETHEILER'S MURINE 1304–  1481–  1599–  POLYPROTEIN ENCEPHALOMYELITISVIRUS 1338 1516 1663 (STRAIN DA) PPOLG_TUMV GENOME THEILER'S MURINE1306–  1483–  1601–  POLYPROTEIN ENCEPHALOMYELITIS VIRUS 1340 1518 1635(STRAIN GDV11) PPOLG_TVMV GENOME TURNIP MOSAIC VIRUS 216– 314– 494– 768–1443– POLYPROTEIN 259 362 528 839 1477 PPOLG_WMV2 GENOME TOBACCO VEINMOTTLING VIRUS  34– 408– 667– 761–  851–  969– 1031– 1643– POLYPROTEIN68 449 704 813 885 1017 1072 1677 1686–  2316–  2701–  2814–  1725 23742749 2848 PPOLG_WNV GENOME WATERMELON MOSAIC VIRUS II  68– 202–POLYPROTEIN 105 236 PPOLG_YEFV1 GENOME WEST NILE VIRUS  74– 207– 847–973– 1413– 2461– 2525– 2737– POLYPROTEIN 108 251 883 1007 1447 2495 25762775 3320–  3385–  3357 3426 PPOLG_YEFV2 GENOME YELLOW FEVER VIRUS(STRAIN 17D) 418– 525– 728– 1388–  2231– 2477– 2958– 3097– POLYPROTEIN452 563 768 1444 2276 2565 2996 3143 PPOLG_YEFV8 GENOME YELLOW FEVERVIRUS (STRAIN 418– 525– 728– 1388–  2231– 2477– 2958– 3097– POLYPROTEINPASTEUR 17D-204) 452 563 768 1444 2276 2565 2996 3143 PPOLH_POL1M GENOMEYELLOW FEVER VIRUS (STRAIN  75– 418– 525– 728– POLYPROTEIN 1899/81) 116452 563 768 PPOLN_EEVVT GENOME POLIOVIRUS TYPE 1 (STRAIN  9– 1047– 1415–  1501–  1610– 1808– 1904– POLYPROTEIN MAHONEY) 43 1102 1449 15491451 1842 1949 PPOLN_FCVC6 NONSTRUCTURAL VENEZUELAN EQUINE 345– 898–1945–  POLYPROTEIN ENCEPHALITIS VIRUS (STRAIN 382 932 1979 TRINIDADPPOLN_FCVF9 NON-STRUCTURAL FELINE CALICIVIRUS (STRAIN 510– POLYPROTEINCF1/68 FIV) 544 PPOLN_HEVBU NON-STRUCTURAL FELINE CALICIVIRUS (STRAINF9)  4– 369– 986– 1023–  POLYPROTEIN 45 410 1020 1061 PPOLN_HEVMENON-STRUCTURAL HEPATITIS E VIRUS (STRAIN BURMA) 338– 1139–  POLYPROTEIN379 1177 PPOLN_HEVMY NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 338–POLYPROTEIN MEXICO) 379 PPOLN_HEVPA NON-STRUCTURAL HEPATITIS E VIRUS(STRAIN 338– 1139–  POLYPROTEIN MYANMAR) 379 1184 PPOLN_MIDDVNON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 337– 1138–  POLYPROTEINPAKISTAN) 378 1176 PPOLN_ONNVG NONSTRUCTURAL MIDDELBURG VIRUS 922–POLYPROTEIN 977 PPOLN_RHDV NONSTRUCTURAL O'NYONG-NYONG VIRUS (STRAIN899– 1942–  2444–  POLYPROTEIN GULU) 933 1986 2502 PPOLN_RRVNNON-STRUCTURAL RABBIT HEMORRHAGIC DISEASE 188– 306– 409– 1657– POLYPROTEIN VIRUS 234 347 457 1716 PPOLN_RRVT NONSTRUCTURAL ROSS RIVERVIRUS (STRAIN NB5092) 895– 1928–  2414–  POLYPROTEIN 929 1962 2467PPOLN_RUBVT NONSTRUCTURAL ROSS RIVER VIRUS (STRAIN T48) 597– 1083– POLYPROTEIN 631 1136 PPOLN_SFV NONSTRUCTURAL RUBELLA VIRUS (STRAIN1506–  1551–  730– 1862–  POLYPROTEIN THERIEN) 1540 1585 1767 1896PPOLN_SINDO NONSTRUCTURAL SEMLIKI FOREST VIRUS 1094–  2358–  POLYPROTEIN1128 2392 PPOLN_SINDV NONSTRUCTURAL SINDBIS VIRUS (SUBTYPE OCKELBO 919–1491–  1961–  2444–  POLYPROTEIN / STRAIN EDSBYN 82-5) 971 1525 19962478 PPOLR_EPMV NONSTRUCTURAL SINDBIS VIRUS (STRAIN HRSP) 1491–  1959– 2442–  POLYPROTEIN 1525 1994 2476 PPOLS_EEEV RNA REPLICASE EGGPLANTMOSAIC VIRUS 899– 1127–  POLYPROTEIN 933 1161 PPOLS_EEEV3 STRUCTURALEASTERN EQUINE ENCEPHALITIS VIRUS 372– 914– POLYPROTEIN 406 951PPOLS_EEVV8 STRUCTURAL EASTERN EQUINE ENCEPHALITIS 373– 915– POLYPROTEINVIRUS (STRAIN VA33[TEN BRO 407 952 PPOLS_EEVVT STRUCTURAL VENEZUELANEQUINE 1216–  POLYPROTEIN ENCEPHALITIS VIRUS (STRAIN TC-83) 1250PPOLS_IBDV5 STRUCTURAL VENEZUELAN EQUINE 1216–  POLYPROTEIN ENCEPHALITISVIRUS (STRAIN 1250 TRINIDAD PPOLS_IBDVA STRUCTURAL AVIAN INFECTIOUSBURSAL 134– 231– 470– POLYPROTEIN DISEASE VIRUS (STRAIN 52/70) 168 286523 PPOLS_IBDVC STRUCTURAL AVIAN INFECTIOUS BURSAL 134– 231– 470–POLYPROTEIN DISEASE VIRUS (STRAIN 168 286 523 AUSTRALI PPOLS_IBDVESTRUCTURAL AVIAN INFECTIOUS BURSAL 134– 231– 470– POLYPROTEIN DISEASEVIRUS (STRAIN CU-1) 168 286 523 PPOLS_IBDVP NONSTRUCTURAL AVIANINFECTIOUS BURSAL 134– 231– 304– PROTEIN VP4 DISEASE VIRUS (STRAIN E)168 286 340 PPOLS_IBDVS STRUCTURAL AVIAN INFECTIOUS BURSAL 115– 212–451– POLYPROTEIN DISEASE VIRUS (STRAIN PBG-98) 149 267 504 PPOLS_IPNV1STRUCTURAL AVIAN INFECTIOUS BURSAL 134– 249– 470– POLYPROTEIN DISEASEVIRUS (STRAIN STC) 168 283 523 PPOLS_IPNVN STRUCTURAL INFECTIOUSPANCREATIC  69– 723– POLYPROTEIN NECROSIS VIRUS (SEROTYPE 103 785JASPER) PPOLS_ONNVG STRUCTURAL INFECTIOUS PANCREATIC 716– POLYPROTEINNECROSIS VIRUS (STRAIN N1) 786 PPOLS_RRV2 STRUCTURAL O'NYONG-NYONG VIRUS(STRAIN GULU) 1204–  POLYPROTEIN 1238 PPOLS_RRVN STRUCTURAL ROSS RIVERVIRUS (STRAIN  35– POLYPROTEIN 213970) 69 PPOLS_RRVT STRUCTURAL ROSSRIVER VIRUS (STRAIN 369– 939– POLYPROTEIN NB5092) 403 973 PPOLS_RUBVHSTRUCTURAL ROSS RIVER VIRUS (STRAIN 939– POLYPROTEIN T48) 973PPOLS_RUBVR STRUCTURAL RUBELLA VIRUS (VACCINE 999– POLYPROTEIN STRAINHPV77) 1036 PPOLS_RUBVT STRUCTURAL RUBELLA VIRUS (VACCINE 999–POLYPROTEIN STRAIN RA27/3) 1036 PPOLS_SINDO STRUCTURAL RUBELLA VIRUS(STRAIN THERIEN) 999– POLYPROTEIN 1036 PPOLS_SINDV STRUCTURAL SINDBISVIRUS (SUBTYPE OCKELBO 362– POLYPROTEIN / STRAIN EDSBYN 82-5) 396PPOLS_SINDW STRUCTURAL SINDBIS VIRUS (STRAINS HRSP 362– POLYPROTEIN ANDHRLP) 396 PPOLS_WEEV STRUCTURAL SINDBIS VIRUS (WILD TYPE SB  34–POLYPROTEIN DERIVED FROM STRAIN AR339) 68 PPOL_BAEVM STRUCTURAL WESTERNEQUINE ENCEPHALITIS 913– POLYPROTEIN VIRUS 947 PPOL_BLVAU POL BABOONENDOGENOUS VIRUS  42– 676– 794– 1001–  POLYPROTEIN (STRAIN M7) 80 743832 1042 PPOL_BLVJ POL BOVINE LEUKEMIA VIRUS 625– POLYPROTEIN(AUSTRALIAN ISOLATE) 673 PPOL_CAEVC POL BOVINE LEUKEMIA VIRUS 625–POLYPROTEIN (JAPANESE ISOLATE BLV-1) 673 PPOL_CAMVD POL CAPRINEARTHRITIS 879– POLYPROTEIN ENCEPHALITIS VIRUS (STRAIN 934 CORK)PPOL_COYMV ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 177– (STRAIND/H) 211 PPOL_E1AV9 PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 87– 333– 447– 838–  896– 1310– 121 367 498 876 930 1351 PPOL_E1AVC POLEQUINE INFECTIOUS ANEMIA 513– 1022–  POLYPROTEIN VIRUS (CLONE 1369) 5661056 PPOL_E1AVY POL EQUINE INFECTIOUS ANEMIA 513– 1022–  POLYPROTEINVIRUS (CLONE CL22) 566 1056 PPOL_FENV1 POL EQUINE INFECTIOUS ANEMIA 512–1021–  POLYPROTEIN VIRUS (ISOLATE WYOMING) 565 1055 PPOL_FIVPE POLFELINE ENDOGENOUS VIRUS ECE1 533– 623– 858– POLYPROTEIN 600 659 899PPOL_FIVSD POL FELINE IMMUNODEFICIENCY 429– 606– POLYPROTEIN VIRUS(ISOLATE PETALUMA) 473 663 PPOL_FIVT2 POL FELINE IMMUNODEFICIENCY 428–606– POLYPROTEIN VIRUS (ISOLATE SAN DIEGO) 473 642 PPOL_FMVD POL FELINEIMMUNODEFICIENCY 428– 595– POLYPROTEIN VIRUS (ISOLATE TM2) 472 662PPOL_FOAMV ENZYMATIC POLYPROTEIN FIGWORT MOSAIC VIRUS 403– (STRAIN DXS)437 PPOL_GALV POL HUMAN SPUMARETROVIRUS 140– 217– 285– POLYPROTEIN(FOAMY VIRUS) 174 256 326 PPOL_HTL1A POL GIBBON APE LEUKEMIA VIRUS 528–673– POLYPROTEIN 562 740 PPOL_HTL1C POL HUMAN T-CELL LEUKEMIA VIRUS 670–POLYPROTEIN TYPE 1 (STRAIN ATK) 711 PPOL_HV1A2 POL HUMAN T-CELL LEUKEMIAVIRUS 670– POLYPROTEIN TYPE I (CARIBBEAN ISOLATE 711 PPOL_HV1B1 POLHUMAN IMMUNODEFICIENCY VIRUS 501– 606– POLYPROTEIN TYPE 1 (ARV2/SF2ISOLATE 537 664 PPOL_HV1B5 POL HUMAN IMMUNODEFICIENCY 513– 639–POLYPROTEIN VIRUS TYPE 1 (BH10 ISOLATE) 549 676 PPOL_HV1BR POL HUMANIMMUNODEFICIENCY 513– 618– POLYPROTEIN VIRUS TYPE 1 (BH5 ISOLATE) 549676 PPOL_HV1EL POL HUMAN IMMUNODEFICIENCY 513– 618– POLYPROTEIN VIRUSTYPE 1 (BRU ISOLATE) 549 676 PPOL_HV1H2 POL HUMAN IMMUNODEFICIENCY 500–626– POLYPROTEIN VIRUS TYPE 1 (ELI ISOLATE) 536 663 PPOL_HV1JR POL HUMANIMMUNODEFICIENCY 501– 606– POLYPROTEIN VIRUS TYPE 1 (HXB2 ISOLATE) 537664 PPOL_HV1MA POL HUMAN IMMUNODEFICIENCY VIRUS 505– 610– POLYPROTEINTYPE 1 (JRCSF ISOLATE) 541 668 PPOL_HV1MN POL HUMAN IMMUNODEFICIENCYVIRUS 476– 601– POLYPROTEIN TYPE 1 (MAL ISOLATE) 536 663 PPOL_HV1N5 POLHUMAN IMMUNODEFICIENCY VIRUS 504– 609– POLYPROTEIN TYPE 1 (MN ISOLATE)540 667 PPOL_HV1ND POL HUMAN IMMUNODEFICIENCY VIRUS 501– 627–POLYPROTEIN TYPE 1 (NEW YORK-5 ISOL 537 664 PPOL_HV1OY POL HUMANIMMUNODEFICIENCY 500– 626– POLYPROTEIN VIRUS TYPE 1 (NDK ISOLATE) 536663 PPOL_HV1PV POL HUMAN IMMUNODEFICIENCY 501– 606– POLYPROTEIN VIRUSTYPE I (OYI ISOLATE) 537 664 PPOL_HV1RH POL HUMAN IMMUNODEFICIENCY 513–693– POLYPROTEIN VIRUS TYPE 1 (PV22 ISOLATE) 549 676 PPOL_HV1U4 POLHUMAN IMMUNODEFICIENCY VIRUS 500– 605– POLYPROTEIN TYPE 1 (RF/HATISOLATE) 536 663 PPOL_HV1Z2 POL HUMAN IMMUNODEFICIENCY VIRUS 500– 601–POLYPROTEIN TYPE 1 (STRAIN UGANDAN 536 663 PPOL_HV2BE POL HUMANIMMUNODEFICIENCY VIRUS 500– 626– POLYPROTEIN TYPE 1 (Z2/CDC-Z34 ISOLA536 663 PPOL_HV2CA POL HUMAN IMMUNODEFICIENCY  49– 484– 653– 817–POLYPROTEIN VIRUS TYPE 2 (ISOLATE BEN) 83 582 617 851 PPOL_HV2D1 POLHUMAN IMMUNODEFICIENCY 355– 464– 632– POLYPROTEIN VIRUS TYPE 2 (ISOLATECAM2) 390 562 666 PPOL_HV2D2 POL HUMAN IMMUNODEFICIENCY 502– 671–POLYPROTEIN VIRUS TYPE 2 (ISOLATE D194) 600 705 PPOL_HV2G1 POL HUMANIMMUNODEFICIENCY VIRUS 376– 484– 529– 653– POLYPROTEIN TYPE 2 (ISOLATED205.7) 410 526 577 687 PPOL_HV2NZ POL HUMAN IMMUNODEFICIENCY VIRUS 464–633– POLYPROTEIN TYPE 2 (ISOLATE GHANA-I 562 667 PPOL_HV2RO POL HUMANIMMUNODEFICIENCY VIRUS  44– 356– 464– 633– POLYPROTEIN TYPE 2 (ISOLATENIH-Z) 78 390 529 667 PPOL_HV2SB POL HUMAN IMMUNODEFICIENCY 357– 465–634– POLYPROTEIN VIRUS TYPE 2 (ISOLATE ROD) 391 563 668 PPOL_HV2ST POLHUMAN IMMUNODEFICIENCY VIRUS  46– 473– 633– POLYPROTEIN TYPE 2 (ISOLATESBLISY) 80 562 667 PPOL_IPHA POL HUMAN IMMUNODEFICIENCY 484– 522– 653–POLYPROTEIN VIRUS TYPE 2 (ISOLATE ST) 518 577 687 PPOL_JSRV PUTATIVE POLHAMSTER INTRACISTERNAL 462– POLYPROTEIN A-PARTICLE 503 PPOL_MLVAK POLSHEEP PULMONARY 190– POLYPROTEIN ADENOMATOSIS VIRUS 231 PPOL_MLVAV POLAKR MURINE LEUKEMIA VIRUS 325– POLYPROTEIN 392 PPOL_MLVF5 POL AKV MURINELEUKEMIA VIRUS 677– POLYPROTEIN 744 PPOL_MLVFF POL FRIEND MURINELEUKEMIA 682– POLYPROTEIN VIRUS (ISOLATE 57) 749 PPOL_MLVFP POL FRIENDMURINE LEUKEMIA 682– POLYPROTEIN VIRUS (ISOLATE FB29) 749 PPOL_MLVMO POLFRIEND MURINE LEUKEMIA 682– POLYPROTEIN VIRUS (ISOLATE PVC-211) 749PPOL_MLVRD POL MOLONEY MURINE LEUKEMIA VIRUS 677– POLYPROTEIN 744PPOL_MLVRK POL RADIATION MURINE LEUKEMIA VIRUS 677– POLYPROTEIN 744PPOL_MPMV POL RADIATION MURINE LEUKEMIA  62– POLYPROTEIN VIRUS (STRAINKAPLAN) 129 PPOL_OMVVS POL SIMIAN MASON-PFIZER VIRUS 470– 578–POLYPROTEIN 504 613 PPOL_RSVP POL OVINE LENTIVIRUS (STRAIN 470– 855–POLYPROTEIN SA-OMVV) 505 910 PPOL_RTBV POL ROUS SARCOMA VIRUS (STRAIN646– POLYPROTEIN PRAGUE C) 684 PPOL_RTBVP POLYPROTEIN RICE TUNGROBACILLIFORM VIRUS  7–  59– 101– 176–  325–  433– 1005– 1405– 44 96 135236 362 474 1039 1439 PPOL_SFV1 POLYPROTEIN RICE TUNGRO BACILLIFORMVIRUS  7–  59– 101– 176–  325–  433– 1005– 1405– (ISOLATE PHILIPPINES)44 96 135 236 362 474 1039 1439 PPOL_SFV3L POL SIMIAN FOAMY VIRUS(TYPE 1) 349– 427– 494– POLYPROTEIN 383 464 535 PPOL_SIVA1 POL SIMIANFOAMY VIRUS (TYPE 3 124– 429– 496– POLYPROTEIN / STRAIN LK3) 165 467 530PPOL_SIVA2 POL SIMIAN IMMUNODEFICIENCY 351– 637– 737– 938– POLYPROTEINVIRUS (AGM155 ISOLATE) 385 678 771 979 PPOL_SIVAG POL SIMIANIMMUNODEFICIENCY  45– POLYPROTEIN VIRUS (AGM266 ISOLATE) 86 PPOL_SIVA1POL SIMIAN IMMUNODEFICIENCY 477– 642– 742– POLYPROTEIN VIRUS (AGM3ISOLATE) 516 683 783 PPOL_SIVAT POL SIMIAN IMMUNODEFICIENCY VIRUS 175–476– 641– 942– 1020– POLYPROTEIN (ISOLATE AGM / CLONE GR 209 515 700 9831054 PPOL_SIVCZ POL SIMIAN IMMUNODEFICIENCY 657– 757– POLYPROTEIN VIRUS(TYO-1 ISOLATE) 698 798 PPOL_SIVGB POL CHIMPANZEE IMMUNODEFICIENCY 527–626– POLYPROTEIN VIRUS (SIV(CPZ)) 561 688 PPOL_SIVM1 POL SIMIANIMMUNODEFICIENCY  9– 446– 629– 793–  912– POLYPROTEIN VIRUS (ISOLATEGB1) 57 483 673 827 946 PPOL_SIVMK POL SIMIAN IMMUNODEFICIENCY 485– 654–POLYPROTEIN VIRUS (MM142-83 ISOLATE) 519 688 PPOL_SIVS4 POL SIMIANIMMUNODEFICIENCY 485– 654– POLYPROTEIN VIRUS (K6W ISOLATE) 519 688PPOL_SIVSP POL SIMIAN IMMUNODEFICIENCY 448– 617– POLYPROTEIN VIRUS(F236/SMH4 ISOLATE) 482 651 PPOL_SOCMV POL SIMIAN IMMUNODEFICIENCY 451–620– POLYPROTEIN VIRUS (PBJ/BC13 ISOLATE) 485 654 PPOL_SRV1 ENZYMATICPOLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 247– 372– 295 416 PPOL_VILVPOL _POLYPROTEIN SIMIAN RETROVIRUS SRV-1 470– 578– 504 613 PPOL_VILV1POL VISNA LENTIVIRUS (STRAIN 489– 874– POLYPROTEIN 1514) 524 929PPOL_VILV2 POL VISNA LENTIVIRUS (STRAIN 489– 874– POLYPROTEIN 1514 /CLONE LV1-1KS1) 524 929 PPP15_HCMVA POL VISNA LENTIVIRUS (STRAIN 489–874– POLYPROTEIN 1514 / CLONE LV1-1KS2) 524 929 PPR73_MMTVB LARGE HUMANCYTOMEGALOVIRUS 116– 187– STRUCTURAL (STRAIN AD169) 150 221PHOSPHOPROTEIN PP150 PPR73_MMTVC PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS152– (STRAIN BR6) 200 PPR73_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS 20– (STRAIN OH) 79 PPR7L_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS 61– 142– (STRAIN GR) 95 201 PPR7R_MMTVG PROTEIN PR73 MOUSE MAMMARYTUMOR VIRUS 145– 270– (STRAIN GR) 204 311 PPYHD_CPVBM PROTEIN PR73 MOUSEMAMMARY TUMOR VIRUS 141– 266– (STRAIN GR) 200 307 PPYHD_NPVAC POLYHEDRINBOMBYX MORI CYTOPLASMIC  13– PRECURSOR POLYHEDROSIS VIRUS 85 PPYHD_NPVASPOLYHEDRIN AUTOGRAPHA CALIFORNICA  13– NUCLEAR POLYHEDROSIS VIRUS 47PPYHD_NPVBM POLYHEDRIN AGROTIS SEGETU M NUCLEAR  14– POLYHEDROSIS VIRUS48 PPYHD_NPVBS POLYHEDRIN BOMBYX MORI NUCLEAR  12– POLYHEDROSIS VIRUS 54PPYHD_NPVLD POLYHEDRIN BUZURA SUPPRESSARIA NUCLEAR  14– POLYHEDROSISVIRUS 48 PPYHD_NPVMB POLYHEDRIN LYMANTRIA DISPAR  14– MULTICAPSIDNUCLEAR 48 POLYHEDROSIS V PPYHD_NPVOP POLYHEDRIN MAMESTRA BPASSICAENUCLEAR  14– POLYHEDROSIS VIRUS 48 PPYHD_NPVOS POLYHEDRIN ORGYIAPSEUDOTSUGATA  13– MULTICAPSID POLYHEDROSIS 47 VIRUS PPYHD_NPVPFPOLYHEDRIN ORGYIA PSEUDOTSUGATA  14– SINGLE CAPSID NUCLEAR POLYHED 48PPYHD_NPVSE POLYHEDRIN PANOLIS FLAMMEA  14– MULTIPLE NUCLEOCAPSIDPOLYHEDROSIS 48 PPYHD_NPVSF POLYHEDRIN SPODOPTERA EXIGUA  14– NUCLEARPOLYHEDROSIS VIRUS (STRAIN 48 PPYHD_NPVSL POLYHEDRIN SPODOPTERAFRUGIPERDA  14– NUCLEAR POLYHEDROSIS VIRUS 48 PRASK_MSVK1 POLYHEDRINSPODOPTERA LITTORALIS  17– NUCLEAR POLYHEDROSIS VIRUS 51 PREV_B1V27TRANSFORMING KIRSTEN MURINE SARCOMA VIRUS 142– PROTEIN 21 176 PREV_E1AV9REV BOVINE IMMUNODEFICIENCY  77– PROTEIN VIRUS (ISOLATE 127) 115PREV_E1AVC REV EQUINE INFECTIOUS ANEMIA  51– PROTEIN VIRUS (CLONE 1369)89 PREV_E1AVY REV EQUINE INFECTIOUS ANEMIA  51– PROTEIN VIRUS (CLONECL22) 89 PREV_HV112 REV EQUINE INFECTIOUS ANEMIA  81– PROTEIN VIRUS(ISOLATE WYOMING) 119 PREV_HV1A2 REV HUMAN IMMUNODEFICIENCY  35– PROTEINVIRUS TYPE 1 (CLONE 12) 69 PREV_HV1B1 REV HUMAN IMMUNODEFICIENCY VIRUS 32– PROTEIN TYPE 1 (ARV2/SF2 ISOLATE 69 PREV_HV1B1 REV HUMANIMMUNODEFICIENCY  35– PROTEIN VIRUS TYPE 1 (BH10 ISOLATE) 69 PREV_HV1BNREV HUMAN IMMUNODEFICIENCY  25– PROTEIN VIRUS TYPE 1 (BH8 ISOLATE) 59PREV_HV1BR REV HUMAN IMMUNODEFICIENCY VIRUS  22– PROTEIN TYPE 1 (BRAINISOLATE) 59 PREV_HV1EL REV HUMAN IMMUNODEFICIENCY  35– PROTEIN VIRUSTYPE 1 (BRU ISOLATE) 69 PREV_HV1H2 REV HUMAN IMMUNODEFICIENCY  32–PROTEIN VIRUS TYPE 1 (ELI ISOLATE) 66 PREV_HV1J3 REV HUMANIMMUNODEFICIENCY  35– PROTEIN VIRUS TYPE 1 (HXB2 ISOLATE) 69 PREV_HV1JRREV HUMAN IMMUNODEFICIENCY  29– PROTEIN VIRUS TYPE 1 (JH3 ISOLATE) 63PREV_HV1MA REV HUMAN IMMUNODEFICIENCY VIRUS  31– PROTEIN TYPE 1 (JRCSFISOLATE) 66 PREV_HV1MN REV HUMAN IMMUNODEFICIENCY  31– PROTEIN VIRUSTYPE 1 (MAL ISOLATE) 66 PREV_HV1OY REV HUMAN IMMUNODEFICIENCY  31–PROTEIN VIRUS TYPE 1 (MN ISOLATE) 66 PREV_HV1PV REV HUMANIMMUNODEFICIENCY  32– PROTEIN VIRUS TYPE 1 (OY1 ISOLATE) 69 PREV_HV1S3REV HUMAN IMMUNODEFICIENCY VIRUS  35– PROTEIN TYPE 1 (PV22 ISOLATE) AN69 PREV_HV1SC REV HUMAN IMMUNODEFICIENCY VIRUS  35– PROTEIN TYPE 1 (SF33ISOLATE) 69 PREV_S1VA1 REV HUMAN IMMUNODEFICIENCY VIRUS  32– PROTEINTYPE 1 (SC ISOLATE) 69 PREV_S1VAG REV SIMIAN IMMUNODEFICIENCY VIRUS  26–PROTEIN (AGM155 ISOLATE) 77 PREV_S1VA1 REV SIMIAN IMMUNODEFICIENCY VIRUS 26– PROTEIN (AGM3 ISOLATE) 77 PREV_S1VAT REV SIMIAN IMMUNODEFICIENCYVIRUS  29– PROTEIN (ISOLATE AGM / CLONE GR 77 PREV_S1VCZ REV SIMIANIMMUNODEFICIENCY VIRUS  28– PROTEIN (TYO-1 ISOLATE) 75 PREV_VILV REVCHIMPANZEE IMMUNODEFICIENCY  33– PROTEIN VIRUS 67 PRIR1_ASFM2 REV VISNALENTIVIRUS (STRAIN 1514)  21– PROTEIN 62 PRIR1_EBV RIBONUCLEOSIDE-AFRICAN SWINE FEVER VIRUS  7–  88– 635– DIPHOSPHATE (ISOLATE MALAWI L1L20/1) 41 133 683 REDUCTASE LAR PRIR1_HCMVA RIBONUCLEOSIDE- EPSTEIN-BARRVIRUS (STRAIN B95-8) 213– 689– DIPHOSPHATE 247 723 REDUCTASE LARPRIR1_HSVEB RIBONUCLEOSIDE- HUMAN CYTOMEGALOVIRUS 632– DIPHOSPHATE(STRAIN AD169) 668 REDUCTASE LAR PRIR1_HSVSA RIBONUCLEOSIDE- EQUINEHERPESVIRUS TYPE 1  76– DIPHOSPHATE (STRAIN AB4P) 110 REDUCTASE LARPRIR1_VACCC RIBONUCLEOSIDE- HERPESVIRUS SAIMIRI (STRAIN 11) 324–DIPHOSPHATE 365 REDUCTASE LAR PRIR1_VACCV RIBONUCLEOSIDE- VACCINIA VIRUS(STRAIN COPENHAGEN) 367– DIPHOSPHATE 402 REDUCTASE LAR PRIR1_VARVRIBONUCLEOSIDE- VACCINIA VIRUS (STRAIN WR) 367– DIPHOSPHATE 402REDUCTASE LAR PRIR1_VZVD RIBONUCLEOSIDE- VARIOLA VIRUS 367– DIPHOSPHATE403 REDUCTASE LAR PRIR1_EBV RIBONUCLEOSIDE- VARICELLA-ZOSTER VIRUS 223–DIPHOSPHATE (STRAIN DUMAS) 257 REDUCTASE LAR PRIR2_HSVB3 RIBONUCLEOSIDE-EPSTEIN-BARR VIRUS (STRAIN B95-8)  89– DIPHOSPHATE 137 REDUCTASE SMAPRIR2_HSVEB RIBONUCLEOSIDE- BOVINE HERPESVIRUS TYPE 1 101– DIPHOSPHATE(STRAIN 34) 135 REDUCTASE SMA PRIR2_HSVSA RIBONUCLEOSIDE- EQUINEHERPESVIRUS TYPE 1 106– DIPHOSPHATE (STRAIN AB4P) 140 REDUCTASE SMAPRIR2_SFVKA RIBONUCLEOSIDE- HERPESVIRUS SAIMIRI (STRAIN 11) 125–DIPHOSPHATE 159 REDUCTASE SMA PRIR2_VACCC RIBONUCLEOSIDE- SHOPE FIBROMAVIRUS (STRAIN  98– DIPHOSPHATE KASZA) 132 REDUCTASE SMA PRIR2_VACCPRIBONUCLEOSIDE- VACCINIA VIRUS (STRAIN  98– DIPHOSPHATE COPENHAGEN) 132REDUCTASE SMA PRIR2_VACCV RIBONUCLEOSIDE- VACCINIA VIRUS (STRAIN L-1VP) 98– DIPHOSPHATE 132 REDUCTASE SMA PRIR2_VARV RIBONUCLEOSIDE- VACCINIAVIRUS (STRAIN WR)  98– DIPHOSPHATE 132 REDUCTASE SMA PRL1_HSV2HRIBONUCLEOSIDE- VARIOLA VIRUS  98– DIPHOSPHATE 132 REDUCTASE SMAPRP94_VACCV NEUROVIRULENCE HERPES SIMPLEX VIRUS (TYPE 171– FACTOR 2 /STRAIN HG52) 212 PRP94_VARV RNA-POLY- VACCINIA VIRUS (STRAIN WR) 116–465– 757– MERASE- AND (STRAIN COPENHAGEN 150 540 791 ASSOCIATEDTRANSCRIPTION S PRPO1_VACCC RNA-POLY- VARIOLA VIRUS  41– 116– 465– 757–MERASE- 75 150 540 791 ASSOCIATED TRANSCRIPTION S PRPO1_VACCVDNA-DIRECTED RNA VACCINIA VIRUS (STRAIN 243– 622– 754– 954– 1006–POLYMERASE COPENHAGEN) 291 656 791 988 1057 147 KD POLYPE PRPO1_VARVDNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR) 243– 622– 754– 954– 1024–POLYMERASE 291 656 791 988 1058 147 KD POLYPE PRPO2_CAPVK DNA-DIRECTEDRNA VARIOLA VIRUS 243– 622– 754– 954– 1006– POLYMERASE 291 656 791 9881057 147 KD POLYPE PRPO2_COWPX DNA-DIRECTED RNA CAPRIPOXVIRUS (STRAINKS-1)  19– 114– 589– POLYMERASE 60 155 630 132 KD POLYPE PRPO2_VACCVDNA-DIRECTED RNA COWPOX VIRUS 211– 359– 833– POLYMERASE 245 400 874 132KD POLYPE PRPO2_VARV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR), 211–359– 833– POLYMERASE AND (STRAIN COPENHAGEN) 245 400 874 132 KD POLYPEPRPO4_VACCC DNA-DIRECTED RNA VARIOLA VIRUS 211– 359– 833– POLYMERASE 245400 874 132 KD POLYPE PRPO4_VACCV DNA-DIRECTED RNA VACCINIA VIRUS(STRAIN  62– POLYMERASE COPENHAGEN) 116 35 KD POLYPEP PRPO4_VARVDNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR)  62– POLYMERASE 116 35 KDPOLYPEP PRPO5_VACCC DNA-DIRECTED RNA VARIOLA VIRUS  62– POLYMERASE 11635 KD POLYPEP PRPO5_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN  1–POLYMERASE COPENHAGEN) 71 30 KD POLYPEP PRPO5_VARV DNA-DIRECTED RNAVACCINIA VIRUS (STRAIN WR)  1– POLYMERASE 71 30 KD POLYPEP PRPO6_VACCVDNA-DIRECTED RNA VARIOLA VIRUS  1– POLYMERASE 71 30 KD POLYPEPPRPO6_VARV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR),  25– POLYMERASEAND (STRAIN COPENHAGEN) 59 22 KD POLYPEP PRPO7_VACCV DNA-DIRECTED RNAVARIOLA VIRUS  25– POLYMERASE 59 22 KD POLYPEP PRPO7_VARV DNA-DIRECTEDRNA VACCINIA VIRUS (STRAIN WR),  43– POLYMERASE AND (STRAIN COPENHAGEN)93 19 KD POLYPEP PRPOA_LELV DNA-DIRECTED RNA VARIOLA VIRUS  43–POLYMERASE 93 19 KD POLYPEP PRPOL_EAV RNA-DIRECTED LELYSTAD VIRUS 1533– 1721–  1958–  2109–  RNA 1567 1758 1992 2157 POLYMERASE PRRP1_IAANNRNA-DIRECTED EQUINE ARTERITIS VIRUS 1083–  1477–  1633–  RNA 1117 15181673 POLYMERASE PRRP1_IABE1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN171– 279– POLYMERASE A/ANN ARBOR/6/60) 242 313 SUBUNIT P1 PRRP1_IADUNRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171– 279– 350– POLYMERASEA/BEIJING/11/56) 242 313 391 SUBUNIT P1 PRRP1_IAGU2 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 171– 275– POLYMERASE A/DUNEDIN/4/73) 242 313SUBUNIT P1 PRRP1_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171–279– POLYMERASE A/GULL/MARYLAND/704/77) 242 313 SUBUNIT P1 PRRP1_IAHTERNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 168– 279– POLYMERASEA/EQUINE/LONDON/1416/73) 242 313 SUBUNIT P1 PRRP1_IAKIE RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 168– 279– POLYMERASE A/EQUINE/TENNESSEE/5/86)242 313 SUBUNIT P1 PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 171– 279– POLYMERASE A/KIEV/59/79) 242 313 SUBUNIT P1PRRP1_IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171– 279–POLYMERASE A/KOREA/426/68) 242 313 SUBUNIT P1 PRRP1_IALE2 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 171– 279– POLYMERASE A/LENINGRAD/134/57)242 313 SUBUNIT P1 PRRP1_1ALE3 RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 171– 279– POLYMERASE A/LENINGRAD/134/17/57) 242 313 SUBUNIT P1PRRP1_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171– 279–POLYMERASE A/LENINGRAD/134/47/57) 242 313 SUBUNIT P1 PRRP1_IAME8RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171– 279– POLYMERASEA/MALLARD/NEW YORK/6750/78) 242 313 SUBUNIT P1 PRRP1_IANT6 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 171– 279– POLYMERASE A/MEMPHIS/8/88) 242313 SUBUNIT P1 PRRP1_1APUE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN171– 279– POLYMERASE A/NT/60/68) 242 313 SUBUNIT P1 PRRP1_IASINRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 168– 279– POLYMERASE A/PUERTORICO/8/34) 242 313 SUBUNIT P1 PRRP1_IATKM RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 171– 279– POLYMERASE A/SINGAPORE/1/57) 242 313 SUBUNIT P1PRRP1_IAV17 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171– 279–POLYMERASE A/TURKEY/MINNESOTA/833/80 242 313 SUBUNIT P1 PRRP1_IAW1LRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 171– 279– POLYMERASEA/VICTORIA/3/75) 242 313 SUBUNIT P1 PRRP1_IAW1S RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 183– 279– POLYMERASE A/WILSON-SMITH/33) 242313 SUBUNIT P1 PRRP1_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN168– 279– POLYMERASE A/WISCONSIN/3523/88) 242 313 SUBUNIT P1 PRRP1_IAZONRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 187– 279– POLYMERASEA/SWINE/HONG KONG/126/82) 242 313 SUBUNIT P1 PRRP1_IAZTF RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 171– 279– POLYMERASE A/SWINE/ONTARIO/2/81)242 313 SUBUNIT P1 PRRP1_INBAC RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 171– 279– POLYMERASE A/SWINE/TENNESSEE/28/77) 242 313 SUBUNIT P1PRRP1_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 208– POLYMERASEB/ANN ARBOR/1/66) 249 SUBUNIT P1 PRRP1_INBLE RNA-DIRECTED RNA INFLUENZAB VIRUS (STRAIN 208– POLYMERASE B/ANN ARBOR/1/66 [WILD-TYPE] 249 SUBUNITP1 PRRP1_INCJJ RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 208–POLYMERASE B/LEE/40) 249 SUBUNIT P1 PRRP2_IAANN RNA-DIRECTED RNAINFLUENZA C VIRUS (STRAIN 350– 648– 707– POLYMERASE C/JJ/50) 384 686 752SUBUNIT P1 PRRP2_IADH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110–177– POLYMERASE A/ANN ARBOR/6/60) 144 218 SUBUNIT P2 PRRP2_IAFPRRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASEA/DUCK/HOKKAIDO/8/80) 144 218 SUBUNIT P2 PRRP2_IAGU2 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASE A/FOWL PLAGUEVIRUS/ROSTOCK 144 218 SUBUNIT P2 PRRP2_IAHLO RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 110– 177– POLYMERASE A/GULL/MARYLAND/704/77) 144 218SUBUNIT P2 PRRP2_IAHTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110–177– POLYMERASE A/EQUINE/LONDON/1416/73) 144 218 SUBUNIT P2 PRRP3_IAKORRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASEA/EQUINE/TENNESSEE/5/86) 144 218 SUBUNIT P2 PRRP2_IALE1 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASE A/KOREA/426/68) 144 218SUBUNIT P2 PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110–177– POLYMERASE A/LENINGRAD/134/57) 144 218 SUBUNIT P2 PRRP2_IAMANRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASEA/LENINGRAD/134/17/57) 144 218 SUBUNIT P2 PRRP2_IANT6 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASE A/MALLARD/NEWYORK/6750/78) 144 218 SUBUNIT P2 PRRP2_IAP10 RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 110– 177– POLYMERASE A/NT/60/68) 144 218 SUBUNIT P2PRRP2_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177–POLYMERASE A/PINTAIL/ALBERTA/119/79) 144 218 SUBUNIT P2 PRRP2_IARUDRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASE A/PUERTORICO/8/34) 144 218 SUBUNIT P2 PRRP2_IASIN RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 110– 177– POLYMERASE A/RUDDY TURNSTONE/NEW JERS 144 218SUBUNIT P2 PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110–177– POLYMERASE A/SINGAPORE/1/57) 144 218 SUBUNIT P2 PRRP2_IAV17RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASEA/TURKEY/MINNESOTA/833/80) 144 218 SUBUNIT P2 PRRP2_IAWIL RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASE A/VICTORIA/3/75) 144218 SUBUNIT P2 PRRP2_IAZH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN110– 177– POLYMERASE A/WILSON-SMITH/33) 144 218 SUBUNIT P2 PRRP2_IAZH3RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASEA/SWINE/HONG KONG/81/78 144 218 SUBUNIT P2 PRRP2_IAZ11 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 110– 177– POLYMERASE A/SWINE/HONG KONG/I26/82) 144 218 SUBUNIT P2 PRRP2_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 110– 177– POLYMERASE A/SWINE/IOWA/15/30 144 218 SUBUNIT P2PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 110– 177–POLYMERASE A/SWINE/TENNESSEE/26/77) 144 218 SUBUNIT P2 PRRP2_INBADRNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 111– 349– POLYMERASE B/ANNARBOR/1/66 [COLD-ADAPTE 196 390 SUBUNIT P2 PRRP2_INBS1 RNA-DIRECTED RNAINFLUENZA B VIRUS (STRAIN 111– 349– POLYMERASE B/ANN ARBOR/1/66[WILD-TYPE]) 196 390 SUBUNIT P2 PRRP3_IAANN RNA-DIRECTED RNA INFLUENZA BVIRUS (STRAIN 111– 349– POLYMERASE B/SINGAPORE/222/79) 196 383 SUBUNITP2 PRRP3_IABUD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473–707– POLYMERASE A/ANN ARBOR/6/60) 42 402 514 755 SUBUNIT P3 PRRP3_IACH1RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 318–  707–POLYMERASE A/BUDGERIGAR/HOKKAIDO/1/77) 42 402 514 367 755 SUBUNIT P3PRRP3_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473–707– POLYMERASE A/CHILE/1/83) 42 402 514 755 SUBUNIT P3 PRRP3_IAFPWRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/FOWL PLAGUE VIRUS/ROSTOCK 42 402 514 755 SUBUNIT P3 PRRP3_IAGU2RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/FOWL PLAGUE VIRUS/WEYBRID 42 402 514 755 SUBUNIT P3 PRRP3_IAGUARNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/GULL/MARYLAND/704/77 42 402 514 755 SUBUNIT P3 PRRP3_IAHK6RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  7– 363– 473– 707– POLYMERASEA/GULL/ASTRAKHAN/227/84) 41 402 514 755 SUBUNIT P3 PRRP3_IAHLORNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/EQUINE/KENTUCKY/2/860) 42 402 514 755 SUBUNIT P3 PRRP3_IAHPRRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/EQUINE/LONDON/1416/73) 42 402 514 755 SUBUNIT P3 PRRP3_IAKIERNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 721– POLYMERASEA/EQUINE/PRAGUE/1/56) 42 402 514 755 SUBUNIT P3 PRRP3_IAKOR RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/KIEV/59/79) 42 402 514 755 SUBUNIT P3 PRRP3_IALE1 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASE A/KOREA/426/68)42 402 514 755 SUBUNIT P3 PRRP3_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN  1– 363– 473– 707– POLYMERASE A/LENINGRAD/134/57) 42 402 514 755SUBUNIT P3 PRRP3_IALE3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1–363– 473– 707– POLYMERASE A/LENINGRAD/134/17/57) 42 402 514 755 SUBUNITP3 PRRP3_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473–707– POLYMERASE A/LENINGRAD/134/47/57) 42 402 514 755 SUBUNIT P3PRRP3_IAME8 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 363– 473– 707–POLYMERASE A/MALLARD/NEW YORK/6750/78) 403 514 755 SUBUNIT P3PRRP3_IANT6 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  7– 363– 473–707– POLYMERASE A/MEMPHIS/8/88) 41 402 514 755 SUBUNIT P3 PRRP3_IAPUERNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/NT/60/68) 42 402 514 755 SUBUNIT P3 PRRP3_IARUD RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASE A/PUERTORICO/8/34) 42 402 514 755 SUBUNIT P3 PRRP3_IASE3 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASE A/RUDDYTURNSTONE/NEW JERSE 42 402 514 755 SUBUNIT P3 PRRP3_IAS1N RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/SEAL/MASSACHUSETTS/133/82) 42 402 514 755 SUBUNIT P3 PRRP3_IATKMRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/SINGAPORE/1/57) 42 402 514 755 SUBUNIT P3 PRRP3_IAV17 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/TURKEY/MINNESOTA/133/80) 42 402 514 755 SUBUNIT P3 PRRP3_IAW1LRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/VICTORIA/3/75) 42 402 514 755 SUBUNIT P3 PRRP3_IAZ11 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/WILSON-SMITH/33 42 402 514 755 SUBUNIT P3 PRRP3_IAZTE RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN  1– 363– 473– 707– POLYMERASEA/SWINE/IOWA/15/30) 42 402 514 755 SUBUNIT P3 PRRP3_INBAC RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN  7– 363– 473– 707– POLYMERASEA/SWINE/TENNESSEE/24/77 41 402 514 755 SUBUNIT P3 PRRP3_INBADRNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 458– POLYMERASE B/ANNARBOR/1/66 [COLD-ADAPTE 533 SUBUNIT P3 PRRP3_INCBE RNA-DIRECTED RNAINFLUENZA B VIRUS (STRAIN 438– POLYMERASE B/ANN ARBOR/1/66 [WILD-TYPE])533 SUBUNIT P3 PRRP3_INC11 RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN235– 275– POLYMERASE C/BERLIN/1/85) 269 309 SUBUNIT P3 PRRP3_THOGVRNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 235– 275– POLYMERASE C/JJ/50)269 316 SUBUNIT P3 PRRPA_CVH22 RNA-DIRECTED RNA THOGOTO VIRUS 343–POLYMERASE 401 SUBUNIT P3 PRRPA_CVMJH RNA-DIRECTED HUMAN CORONA VIRUS(STRAIN 229E) 358– 495– 1742–  1971–  3664– 3912– RNA 392 571 1776 20083724 3946 POLYMERASE PRRPB_BEV RNA-DIRECTED MURINE CORONA VIRUS MHV 617–1364–  2769–  3586–  3821– 4075– 4319– RNA (STRAIN JHM) 651 1398 28033620 3855 4121 4353 POLYMERASE PRRPB_CVMA5 RNA-DIRECTED BERNE VIRUS  20–617– 943– RNA 64 651 1009 POLYMERASE PRRPB_CVMJH RNA-DIRECTED MURINECORONA VIRUS MHV 1129–  1303–  1453–  1692–  2629– RNA (STRAIN A59) 11701337 1494 1726 2670 POLYMERASE PRRPB_IBVB RNA-DIRECTED MURINE CORONAVIRUS MHV 1129–  1303–  1453–  1690–  2627– RNA (STRAIN JHM) 1170 13371494 1724 2668 POLYMERASE PRRPB_IBVK RNA-DIRECTED AVIAN INFECTIOUSBRONCHITIS 499– 650– 1460–  1509–  2246– RNA VIRUS (STRAIN BEAUDETTE)550 695 1494 1548 2287 POLYMERASE PRRPL_BTV10 RNA-DIRECTED AVIANINFECTIOUS BRONCHITIS 115– RNA VIRUS (STRAIN KB8523) 156 POLYMERASEPRRPL_BUNYW RNA-DIRECTED BLUETONGUE VIRUS (SEROTYPE 308– 705– 825–1021–  1114– RNA 10 / ISOLATE USA) 342 748 903 1076 1201 POLYMERASEPRRPL_CDVO RNA POLYMERASE BUNYAMWERA VIRUS  2–  80– 308– 371– 1704–1802– 1889– 36 114 363 412 1741 1861 1935 PRRPL_HANTV RNA CANINEDISTEMPER VIRUS  20– POLYMERASE (STRAIN ONDERSTEPOORT) 54 BETA SUBUNITPRRPL_HRSVA RNA POLYMERASE HANTAAN VIRUS (STRAIN 76-118)  98– 174– 372–557–  655–  731–  905– 1276– 139 208 431 591 696 783 949 1310 1419– 1742–  1993–  1453 1776 2027 PRRPL_MABVM RNA HUMAN RESPIRATORY SYNCYTIALVIRUS  87– 827– 1131–  1185–  1465– POLYMERASE (STRAIN A2 188 861 11791220 1517 BETA SUBUNIT PRRPL_MABVP RNA-DIRECTED MARBURG VIRUS (STRAIN597– 1046–  1490–  1804–  2029– 2194– RNA MUSOKE) 631 1092 1552 18382063 2266 POLYMERASE PRRPL_MEASE RNA-DIRECTED MARBURG VIRUS (STRAINPOPP) 597– 1046–  1490–  RNA 631 1092 1552 POLYMERASE PRRPL_MUMPM RNAMEASLES VIRUS (STRAIN 197– 790– 869– 1064–  1283– 2121– POLYMERASEEDMONSTON) 231 824 903 1109 1317 2155 BETA SUBUNIT PRRPL_NDVB RNA MUMPSVIRUS (STRAIN 164– 220– 267– 576–  752– 1231– 1447– 1487– POLYMERASEMIYAHARA VACCINE) 214 254 304 627 807 1286 1481 1531 BETA SUBUNIT 1566– 2191–  1600 2225 PRRPL_P12HT RNA NEWCASTLE DISEASE VIRUS 167– 230–1969–  2043–  2108– POLYMERASE (STRAIN BEAUDETTE C/45) 208 295 2013 20772142 BETA SUBUNIT PRRPL_P13H4 RNA HUMAN PARAINFLUENZA 2 136– 575– 750–1226–  1316– 1417– 1564– 1687– POLYMERASE VIRUS (STRAIN TOSHIBA) 170 628785 1284 1357 1479 1630 1721 BETA SUBUNIT 1901–  1955 PRRPL_PUUMH RNAHUMAN PARAINFLUENZA 3 VIRUS  48– 107– 540– 747– 1064– 1293– 1499– 1994–POLYMERASE (STRAIN NIH 47885) 91 163 574 781 1129 1356 1536 2036 BETASUBUNIT PRRPL_RABVP RNA-DIRECTED PUUMALA VIRUS (STRAIN  98– 381– 444–557–  655–  731–  922– 1119– RNA HALLNAS B1) 132 415 488 591 696 783 9761153 POLYMERASE 1742–  1940–  1993–  1776 1975 2032 PRRPL_RABVS RNARABIES VIRUS (STRAIN PV)  73– 197– 696– 1174–  1522– 1584– 2068–POLYMERASE 114 231 730 1222 1580 1618 2123 BETA SUBUNIT PRRPL_RDV RNARABIES VIRUS (STRAIN SAD B19)  73– 197– 696– 749– 1174– 1522– 1584–POLYMERASE 114 231 730 783 1222 1580 2123 BETA SUBUNIT PRRPL_RVFVZRNA-DIRECTED RICE DWARF VIRUS  17– 534– 844– 918– 1037– RNA 61 575 878985 1071 POLYMERASE PRRPL_SEND5 RNA-DIRECTED RIFT VALLEY FEVER VIRUS398– 641– 832– 1081–  1653– 1819– RNA (STRAIN ZH-548 M12) 439 678 8871115 1687 1870 POLYMERASE PRRPL_SENDE RNA SENDAI VIRUS (STRAIN Z / HOSTMUTANTS) 309– 540– 612– 747– 1064– 1239– 1499– 2000– POLYMERASE 343 600656 781 1119 1280 1536 2034 BETA SUBUNIT 2146–  2216 PRRPL_SENDZ RNASENDAI VIRUS (STRAIN ENDERS) 129– 360– 432– 567–  884– 1059– 1319– 1820–POLYMERASE 163 420 476 601 939 1100 1356 1854 BETA SUBUNIT 1966–  2036PRRPL_SEOU8 RNA SENDAI VIRUS (STRAIN Z) 309– 540– 612– 747– 1064– 1239–1499–  000– POLYMERASE 343 600 656 781 1119 1280 1536 2034 BETA SUBUNIT2146–  2216 PRRPL_SVSWR RNA-DIRECTED SEOUL VIRUS (STRAIN 80-39)  98–174– 557– 655–  731– 1742– 1947– 1993– RNA 139 208 591 696 765 1776 19812027 POLYMERASE PRRPL_SYNV RNA SIMIAN VIRUS 5 (STRAIN 547– 747– 1225– 1319–  1592– 1676– 2024– POLYMERASE 21004-WR) 627 781 1280 1353 16261715 2058 BETA SUBUNIT PRRPL_TSWVD RNA SONCHUS YELLOW NET VIRUS 760–825– 977– 1089–  1978– 2059– POLYMERASE 794 859 1014 1137 2032 2107 BETASUBUNIT PRRPL_UUK RNA-DIRECTED TOMATO SPOTTED WILT VIRUS  46– 399– 539–589– 1119– 1195– 1321– 1538– RNA (BRAZILIAN ISOLATE CPNH1/BR 101 433 573634 1153 1236 1379 1572 POLYMERASE 1684–  1857–  2073–  2156–  2206–2315– 2378– 2809– 1725 1898 2127 2200 2247 2361 2419 2843 PRRPL_VSVJHRNA POLYMERASE UUKUNIEMI VIRUS 127– 282– 836– 1030–  1481– 2015– 2061–183 323 874 1071 1515 2049 2098 PRRPL_VSV1O RNA VESICULAR STOMATITISVIRUS 319– 674– 720– 1522–  1802– POLYMERASE (SEROTYPE NEW JERSEY / STRA358 715 763 1567 1836 BETA SUBUNIT PRRPL_VSVS1 RNA VESICULAR STOMATITISVIRUS 319– 674– 720– 1802–  POLYMERASE (SEROTYPE NEW JERSEY/ STRA 358715 763 1836 BETA SUBUNIT PRRPO_ACLSV RNA VESICULAR STOMATITIS VIRUS674– 720– 1019–  1742–  2066– POLYMERASE (STRAIN SAN JUAN) 715 763 10741799 2107 BETA SUBUNIT PRRPO_BWYVF RNA-DIRECTED APPLE CHLOROTIC LEAFSPOT VIRUS 228– 557– 916– 1235–  RNA 262 596 950 1269 POLYMERASEPRRPO_BYDV1 PUTATIVE RNA-DIRECTED BEET WESTERN YELLOWS VIRUS 304– RNA(ISOLATE FL-1) 341 POLYMERASE PRRPO_BYDVP PUTATIVE RNA-DIRECTED BARLEYYELLOW DWARF VIRUS 234– RNA (ISOLATE MAV-PS1) 285 POLYMERASE PRRPO_BYDVRPUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 234– RNA (ISOLATE PAV)285 POLYMERASE PRRPO_CARMV PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARFVIRUS 234– RNA (ISOLATE P-PAV) 285 POLYMERASE PRRPO_CGMVS PROBABLERNA-DIRECTED CARNATION MOTTLE VIRUS  93– RNA 131 POLYMERASE PRRPO_IBDV5PUTATIVE RNA-DIRECTED CUCUMBER GREEN MOTTLE MOSAIC  7– 387– 446– 726–1445– RNA VIRUS (WATERMELON STR 41 428 480 767 1479 POLYMERASEPRRPO_IBDVA PUTATIVE RNA-DIRECTED AVIAN INFECTIOUS BURSAL 384– 446– RNADISEASE VIRUS (STRAIN 52/70) 432 484 POLYMERASE PRRPO_IPNV1 PUTATIVERNA-DIRECTED AVIAN INFECTIOUS BURSAL 144– 266– 709– 771– RNA DISEASEVIRUS (STRAIN 185 307 757 809 POLYMERASE AUSTRALI PRRPO_IPNV5 PUTATIVERNA-DIRECTED INFECTIOUS PANCREATIC 147– 268– 501– 750– RNA NECROSISVIRUS (SEROTYPE 181 407 535 802 POLYMERASE JASPER) PRRPO_LYCVA PUTATIVERNA-DIRECTED INFECTIOUS PANCREATIC 147– 366– 501– 753– RNA NECROSISVIRUS (SEROTYPE SP) 181 407 535 802 POLYMERASE PRRPO_LYCVW RNAPOLYMERASE LYMPHOCYTIC 301– 805– 926– 1509–  2090– CHORIOMENINGITISVIRUS 346 886 960 1543 2124 (STRAIN ARMSTRON PRRPO_MCMV RNA POLYMERASELYMPHOCYTIC 301– CHORIOMENINGITIS VIRUS 345 (STRAIN WE) PRRPO_PEAMVPROBABLE RNA-DIRECTED MAIZE CHLOROTIC MOTTLE VIRUS 181– 697– RNA 215 731POLYMERASE PRRPO_PLRV1 RNA-DIRECTED PEA ENATION MOSAIC VIRUS 321– RNA358 POLYMERASE PRRPO_PLRVW PUTATIVE RNA-DIRECTED POTATO LEAFROLL VIRUS336– 423– RNA (STRAIN 1) 373 457 POLYMERASE PRRPO_PPMVS PUTATIVERNA-DIRECTED POTATO LEAFROLL VIRUS 336– 423– RNA (STRAIN WAGENINGEN) 373457 POLYMERASE PRRPO_RCNMV PUTATIVE RNA-DIRECTED PEPPER MILD MOTTLEVIRUS 321– 402– 627– 862– RNA (STRAIN SPAIN 362 454 661 896 POLYMERASEPRRPO_REOVD PUTATIVE RNA-DIRECTED RED CLOVER NECROTIC MOSAIC VIRUS 666–RNA 700 POLYMERASE PRRPO_REOV1 RNA-DIRECTED REOVIRUS (TYPE 3 / STRAIN310– RNA DEARING) 361 POLYMERASE PRRPO_REOVL RNA-DIRECTED REOVIRUS (TYPE2 / STRAIN 310– RNA D5/JONES) 344 POLYMERASE PRRPO_ROTBR RNA-DIRECTEDREOVIRUS (TYPE 1 / STRAIN LANG) 310– RNA 361 POLYMERASE PRRPO_ROTBURNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN RF)  60– 133– 204– 535–  579– 639–  690–  771– POLYMERASE 96 167 245 569 631 686 724 805 SUBUNIT VP1PRRPO_ROTPC RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN UK)  60– 133– 204–535–  579–  639–  690–  771– POLYMERASE 96 167 245 569 631 686 724 805SUBUNIT VP1 PRRPO_ROTPG RNA-DIRECTED RNA PORCINE ROTAVIRUS (GROUP C  3–255– 335– 476–  518–  966– POLYMERASE / STRAIN COWDEN) 44 299 397 510620 1007 SUBUNIT VP1 PRRPO_ROTS1 RNA-DIRECTED RNA PORCINE ROTAVIRUS(STRAIN  62– 133– 336– 581–  636–  690–  771– POLYMERASE GOTTFRIED) 96167 377 631 686 724 842 SUBUNIT VP1 PRRPO_SBMV RNA-DIRECTED RNA SIMIAN11 ROTAVIRUS (STRAIN SA11)  60– 133– 535– 579–  639–  690–  771–POLYMERASE 96 167 569 631 686 724 805 SUBUNIT VP1 PRRPO_SCVLA PROBABLERNA-DIRECTED SOUTHERN BEAN MOSAIC VIRUS 628– RNA 665 POLYMERASEPRRPO_TACV RNA-DIRECTED SACCHAROMYCES CEREVISIAE 100– 147– RNA VIRUS L-A134 191 POLYMERASE PRRPO_TMGMV RNA POLYMERASE TACARIBE VIRUS 155– 220–375– 484–  891– 1030– 1285– 1981– 204 278 416 518 925 1081 1319 2015PRRPO_TMV PUTATIVE RNA-DIRECTED TOBACCO MILD GREEN MOSAIC 401– 682– 765–RNA VIRUS (TMV STRAIN U2) 449 720 818 POLYMERASE PRRPO_TMVKR PUTATIVERNA-DIRECTED TOBACCO MOSAIC VIRUS  3– 401– 665– RNA (VULGARE) 37 453 699POLYMERASE PRRPO_TMVTO PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS  3–401– 665– RNA (STRAIN KOREAN) 37 453 699 POLYMERASE PRRPO_TNVD PUTATIVERNA-DIRECTED TOBACCO MOSAIC VIRUS  3– 401– 860– RNA (STRAIN TOMATO/L) 37453 894 POLYMERASE PRRPP_BRSVA RNA-DIRECTED TOBACCO NECROSIS VIRUS 102–RNA (STRAIN D) 144 POLYMERASE PRRPP_CDVO RNA BOVINE RESPIRATORY  99–160– POLYMERASE SYNCYTIAL VIRUS (STRAIN 158 216 ALPHA A51908) SUBUNITPRRPP_HRSV RNA CANINE DISTEMPER VIRUS 312– POLYMERASE (STRAINONDERSTEPOORT) 373 ALPHA SUBUNIT PRRPP_HRSV1 RNA HUMAN RESPIRATORYSYNCYTIAL VIRUS  99– 160– POLYMERASE 158 216 ALPHA SUBUNIT PRRPP_HRSVARNA HUMAN RESPIRATORY SYNCYTIAL  99– 160– POLYMERASE VIRUS (SUBGROUP B /STRAI 158 216 ALPHA SUBUNIT PRRPP_HRSVL RNA HUMAN RESPIRATORY SYNCYTIAL 99– 160– POLYMERASE VIRUS (STRAIN A2) 158 216 ALPHA SUBUNIT PRRPP_MEASERNA HUMAN RESPIRATORY SYNCYTIAL  99– 160– POLYMERASE VIRUS (SUBGROUP A /STRAI 158 216 ALPHA SUBUNIT PRRPP_MEAS1 RNA MEASLES VIRUS (STRAIN 315–460– POLYMERASE EDMONSTON) 374 495 ALPHA SUBUNIT PRRPP_MEASY RNA MEASLESVIRUS (STRAIN IP-3-CA) 315– 460– POLYMERASE 374 495 ALPHA SUBUNITPRRPP_MUMP1 RNA MEASLES VIRUS (STRAIN 315– 460– POLYMERASE YAMAGATA-1)374 495 ALPHA SUBUNIT PRRPP_MUMPE RNA MUMPS VIRUS (STRAIN SBL-1) 149–213– POLYMERASE 183 275 ALPHA SUBUNIT PRRPP_MUMPM RNA MUMPS VIRUS(STRAIN ENDERS) 214– POLYMERASE 276 ALPHA SUBUNIT PRRPP_NDVA RNA MUMPSVIRUS (STRAIN 214– POLYMERASE MIYAHARA VACCINE) 276 ALPHA SUBUNITPRRPP_NDVB RNA NEWCASTLE DISEASE VIRUS (STRAIN 100– POLYMERASEAUSTRALIA-VICTORIA/32) 134 ALPHA SUBUNIT PRRPP_PI1HB RNA NEWCASTLEDISEASE VIRUS 100– POLYMERASE (STRAIN BEAUDETTE C/45) 138 ALPHA SUBUNITPRRPP_PI1HC RNA HUMAN PARAINFLUENZA 1 VIRUS  80– 313– 375– POLYMERASE(STRAIN C35) 114 364 437 ALPHA SUBUNIT PRRPP_PI1HD RNA HUMANPARAINFLUENZA 1 VIRUS  80– 313– 375– POLYMERASE (STRAIN C39) 114 364 437ALPHA SUBUNIT PRRPP_PI1HE RNA HUMAN PARAINFLUENZA 1 VIRUS  80– 313– 375–POLYMERASE (STRAIN CI-5/73) 114 364 437 ALPHA SUBUNIT PRRPP_PI2H RNAHUMAN PARAINFLUENZA 1 VIRUS  66– 237– 313– 375– POLYMERASE (STRAINCI-14/830) 114 271 364 437 ALPHA SUBUNIT PRRPP_PI2HT RNA HUMANPARAINFLUENZA 2 VIRUS 218– POLYMERASE 281 ALPHA SUBUNIT PRRPP_PI3B RNAHUMAN PARAINFLUENZA 2 VIRUS 218– POLYMERASE (STRAIN TOSHIBA) 281 ALPHASUBUNIT PRRPP_PI3H4 RNA BOVINE PARAINFLUENZA 3 VIRUS  31– 414–POLYMERASE 130 470 ALPHA SUBUNIT PRRPP_PI4HA RNA HUMAN PARAINFLUENZA 3VIRUS 410– POLYMERASE (STRAIN NIH 47885) 499 ALPHA SUBUNIT PRRPP_PI4HBRNA HUMAN PARAINFLUENZA 4A  4– 222– POLYMERASE VIRUS (STRAIN TOSHIBA) 38285 ALPHA SUBUNIT PRRPP_P1RYV RNA HUMAN PARAINFLUENZA 4B 222– POLYMERASEVIRUS (STRAIN 68-333) 285 ALPHA SUBUNIT PRRPP_RABVA RNA PIRY VIRUS 137–POLYMERASE 174 ALPHA SUBUNIT PRRPP_RABVC RNA RABIES VIRUS (STRAIN AVO1) 93– POLYMERASE 127 ALPHA SUBUNIT PRRPP_RABVE RNA RABIES VIRUS (STRAINCVS-11)  93– POLYMERASE 127 ALPHA SUBUNIT PRRPP_RABVP RNA RABIES VIRUS(STRAIN ERA),  93– POLYMERASE AND (STRAIN PM) 127 ALPHA SUBUNITPRRPP_RABVS RNA RABIES VIRUS (STRAIN PV)  93– POLYMERASE 127 ALPHASUBUNIT PRRPP_SEND5 RNA RABIES VIRUS (STRAIN SAD B19  93– POLYMERASE 127ALPHA SUBUNIT PRRPP_SEND6 RNA SENDAI VIRUS (STRAIN Z / 313– 375–POLYMERASE HOST MUTANTS) 364 447 ALPHA SUBUNIT PRRPP_SENDF RNA SENDAIVIRUS (STRAIN 6/94) 323– 375– POLYMERASE 364 447 ALPHA SUBUNITPRRPP_SENDH RNA SENDAI VIRUS (STRAIN 313– 375– POLYMERASE FUSHIMI) 364447 ALPHA SUBUNIT PRRPP_SENDZ RNA SENDAI VIRUS (STRAIN 313– 375–POLYMERASE HARRIS) 364 447 ALPHA SUBUNIT PRRPP_SV5 RNA SENDAI VIRUS(STRAIN Z) 313– 375– POLYMERASE 364 447 ALPHA SUBUNIT PRRPP_SYNV RNASIMIAN VIRUS 5 (STRAIN W3) 205– POLYMERASE 278 ALPHA SUBUNIT PRRPP_VSVIGRNA SONCHUS YELLOW NET VIRUS 138– 233– POLYMERASE 173 281 ALPHA SUBUNITPRRPP_VSVIM RNA VESICULAR STOMATITIS VIRUS  3– POLYMERASE (SEROTYPEINDIANA / STRAIN G 43 ALPHA SUBUNIT PRRPP_VSVJM RNA VESICULAR STOMATITISVIRUS  3– POLYMERASE (SEROTYPE INDIANA / STRAIN M 43 ALPHA SUBUNITPRRPP_VSVJO RNA VESICULAR STOMATITIS VIRUS  3– POLYMERASE (SEROTYPE NEWJERSEY / STRA 37 ALPHA SUBUNIT PRRPP_VSVSJ RNA VESICULAR STOMATITISVIRUS  3– POLYMERASE (SEROTYPE NEW JERSEY / STRA 37 ALPHA SUBUNITPSPHR_AMEPV RNA VESICULAR STOMATITIS VIRUS  3– POLYMERASE (STRAIN SANJUAN) 43 ALPHA SUBUNIT PSP12_VACCV SPHEROIDIN AMSACTA MOOREI 223– 361–ENTOMOPOXVIRUS 264 395 PSP12_VARV SERINE VACCINIA VIRUS (STRAIN WR)  21–PROTEINASE INHIBITOR 86 PSP13_VACCC SERINE VARIOLA VIRUS  21– PROTEINASEINHIBITOR 2 86 PSP13_VACCV SERINE VACCINIA VIRUS (STRAIN 118– 225–PROTEINASE INHIBITOR 3 COPENHAGEN) 167 266 PSP13 VARV SERINE VACCINIAVIRUS (STRAIN WR) 118– 225– PROTEINASE INHIBITOR 3 167 266 PSP1A_VACCCSERINE VARIOLA VIRUS 122– 229– PROTEINASE INHIBITOR 3 171 270PT2C2_CHVP1 SERINE VACCINIA VIRUS (STRAIN  11– PROTEINASE COPENHAGEN) 65INHIBITOR 2 HOMOLOG FIRST PTAA2_VACCV TYPE II PARAMECIUM BURSARIA  48–RESTRICTION CHLORELLA VIRUS 1 85 ENZYME CVIA11 PTAG8_FOWPV TRANS-VACCINIA VIRUS (STRAIN WR,  95– 173– ACTIVATOR COPENHAGEN AND VARIOLA VI133 207 PROTEIN A2 PTAG8_VACCV TRANS- FOWLPOX VIRUS  3– ACTIVATOR 51PROTEIN FPO PTAG8_VARV TRANS- VACCINIA VIRUS (STRAIN WR),  3– ACTIVATOR(STRAIN COPENHAGEN) 51 PROTEIN GK1 PTALA_BFDV TRANS- VARIOLA VIRUS  3–ACTIVATOR 51 PROTEIN GK1 PTALA_POVBO LARGE BUDGERIGAR FLEDGLING 291–464– T ANTIGEN DISEASE VIRUS 325 498 PTALA_POVHA LARGE BOVINE POLYOMAVIRUS 303– 495– T ANTIGEN 337 537 PTALA_POVJC LARGE HAMSTER POLYOMAVIRUS 464– 587– T ANTIGEN 501 621 PTALA_POVLY LARGE POLYOMA VIRUS JC153– 589– T ANTIGEN 187 623 PTALA_POVM3 LARGE LYMPHOTROPIC POLYOMA VIRUS 3– 206– 437– T ANTIGEN 41 258 478 PTALA_POVMA LARGE MOUSE POLYOMA VIRUS(STRAIN 3) 509– T ANTIGEN 544 PTALA_POVMC LARGE MOUSE POLYOMA VIRUS(STRAIN A2) 507– T ANTIGEN 542 PTAMI_POVHA LARGE MOUSE POLYOMA VIRUS(STRAIN 504– T ANTIGEN CRAWFORD SMALL-PLAQUE) 539 PTAMI_POVM3 MIDDLEHAMSTER POLYOMA VIRUS 339– T ANTIGEN 378 PTAMI_POVMA MIDDLE MOUSEPOLYOMA VIRUS (STRAIN 3) 211– 388– T ANTIGEN 245 422 PTAMI_POVMC MIDDLEMOUSE POLYOMA VIRUS (STRAIN A2) 192– 369– T ANTIGEN 226 403 PTASM_POVBOMIDDLE MOUSE POLYOMA VIRUS (STRAIN 192– 369– T ANTIGEN CRAWFORDSMALL-PLAQUE) 226 403 PTASM_POVLY SMALL T ANTIGEN BOVINE POLYOMA VIRUS 41– 85 PTATR_NPVAC SMALL T ANTIGEN LYMPHOTROPIC POLYOMA VIRUS  3– 41PTATR_NPVBM TRANS-ACTIVATING AUTOGRAPHA CALIFORNICA 408–  46– 489–TRANSCRIPTIONAL NUCLEAR POLYHEDROSIS VIRUS 442 480 523 REGULATPTATR_NPVOP TRANS-ACTIVATING BOMBYX MORI NUCLEAR 413– 451– 494–TRANSCRIPTIONAL POLYHEDROSIS VIRUS 447 485 528 REGULAT PTAT_SIVA1TRANS-ACTIVATING ORGYIA PSEUDOTSUGATA 391– 511– TRANSCRIPTIONALMULTICAPSID POLYHEDROSIS VIRUS 455 554 REGULAT PTAT_SIVA1 TAT SIMIANIMMUNODEFICIENCY  73– PROTEIN VIRUS (AGM155 ISOLATE) 109 PTAT_VILV TATSIMIAN IMMUNODEFICIENCY VIRUS 137– PROTEIN (ISOLATE AGM / CLONE GR 185PTAT_VILV1 TRANS-ACTIVATING VISNA LENTIVIRUS (STRAIN 1514)  28–TRANSCRIPTIONAL 74 REGULAT PTAT_VILV2 TRANS-ACTIVATING VISNA LENTIVIRUS(STRAIN  40– TRANSCRIPTIONAL 1514 / CLONE LV1-1KS1) 74 REGULAT PTCB_FLVTRANS-ACTIVATING VISNA LENTIVIRUS (STRAIN  40– TRANSCRIPTIONAL 1514 /CLONE LV1-1KS2) 74 REGULAT PTEGP_HSV11 T-CELL RECEPTOR FELINE LEUKEMIAVIRUS 279– BETA CHAIN PRECURSOR 321 PTEGP_HSVEA TEGUMENT PHOSPHO- HERPESSIMPLEX VIRUS (TYPE  27– US9 PROTEIN 1 / STRAIN 17) 61 PTEGP_HSVEBNONSENSE PTEGP_HSVEK NONSENSE PTEGP_HSVSB NONSENSE PTEGU_EBV NONSENSEPTEGU_HCMVA LARGE TEGUMENT EPSTEIN-BARR VIRUS (STRAIN 768– 821– 938–1101–  1208– 1479– 1700– 1809– PROTEIN B95-8) 802 855 972 1138 1242 15161733 1867 1870–  1920–  3108–  1916 1954 3149 PTEGU_HSV11 PROBABLE HUMANCYTOMEGALOVIRUS  34– 215– 543– 700–  868–  936– 1004– 1163– LARGE(STRAIN AD169) 71 249 581 731 909 977 1038 1200 TEGUMENT PROTEIN 1237– 2200–  1296 2235 PTEGU_HSV6G LARGE TEGUMENT HERPES SIMPLEX VIRUS (TYPE731– 801– 1022–  1223–  1275– 1315– 1520– 1609– PROTEIN 1 / STRAIN 17)765 842 1059 1269 1309 1370 1531 1669 1673–  1749–  1820–  2670–  17141783 1854 2704 PTEGU_HSVEB LARGE TEGUMENT HERPES SIMPLEX VIRUS (TYPE 30– 224– 567– 712–  951– 1091– 1192– 1357– PROTEIN 6 / STRAIN GS) 71262 608 757 1000 1181 1233 1400 PTEGU_HSVSA LARGE TEGUMENT EQUINEHERPESVIRUS TYPE 1 560– 635– 794– 908– 1108– 1155– 1399– 1487– PROTEIN(STRAIN AB4P) 597 683 848 956 1151 1246 1458 1549 1619–  1661–  1702– 1806–  1947– 1657 1695 1736 1843 1981 PTEGU_VZVD PROBABLE HERPESVIRUSSAIMIRI (STRAIN 11) 520– 560– 615– 672–  777–  846–  948– 1287– LARGE558 598 652 710 822 898 986 1332 TEGUMENT PROTEIN 1434–  1502PTERM_ADE02 LARGE VARICELLA-ZOSTER VIRUS 657– 713– 804– 933– 1117– 1415–1528– 1572– TEGUMENT (STRAIN DUMAS) 696 747 841 972 1158 1471 1562 1620PROTEIN 1633–  1719–  1945–  2727–  1705 1756 1916 2761 PTERM_ADE05 DNATERMINAL HUMAN ADENOVIRUS TYPE 2 490– PROTEIN 572 PTERM_ADE07 DNATERMINAL HUMAN ADENOVIRUS TYPE 5 490– PROTEIN 592 PTERM_ADE12 DNATERMINAL HUMAN ADENOVIRUS TYPE 7 491– PROTEIN 559 PT1UN_AVIS1 DNATERMINAL HUMAN ADENOVIRUS TYPE 12 443– 497– PROTEIN 491 538 PTMAF_AVIS4TRANSFORMING AVIAN SARCOMA VIRUS 210– PROTEIN JUN (STRAIN 17) 284PTOP1_SFVKA TRANSFORMING AVIAN MUSCULOAPONEUROTIC 247– 295– PROTEIN MAFFIBROSARCOMA VIRUS AS42 288 340 PTOP2_ASFB7 DNA TOPO- SHOPE FIBROMAVIRUS 127– 269– ISOMERASE (STRAIN KASZA) 183 310 PTOP2_ASFM2 DNA TOPO-AFRICAN SWINE FEVER VIRUS 146– 481– 601– 945– 1038– 1123– ISOMERASE II(STRAIN BA71V) 180 515 642 979 1093 1162 PTSIS_SMSAV DNA TOPO- AFRICANSWINE FEVER VIRUS 146– 480– 600– 902–  944– 1038– 1122– ISOMERASE II(ISOLATE MALAWI LIL 20/1) 180 514 641 936 978 1091 1161 PTYSY_VZVDPDGF-RELATED SIMIAN SARCOMA VIRUS  16– TRANSFORMING 71 PROTEIN P28-SISPUBIL_NPVOP THYMIDYLATE VARICELLA-ZOSTER VIRUS 215– SYNTHASE (STRAINDUMAS) 260 PUL01_HCMVA UBIQUITIN-LIKE ORGYIA PSEUDOTSUGATA  43– PROTEINMULTICAPSID POLYHEDROSIS VIRUS 80 PUL03_HSV11 HYPOTHETICAL HUMANCYTOMEGALOVIRUS 169– PROTEIN UL1 (STRAIN AD169) 203 PUL03_HSV2H PROTEINUL3 HERPES SIMPLEX VIRUS (TYPE  94– 1 / STRAIN 17) 128 PUL03_HSVEBPROTEIN UL3 HERPES SIMPLEX VIRUS (TYPE  92– 2 / STRAIN HG52) 126PUL04_HSV11 GENE 60 EQUINE HERPESVIRUS TYPE 1  70– PROTEIN (STRAIN AB4P)104 PUL06_EBV PROTEIN UL4 HERPES SIMPLEX VIRUS (TYPE 102– 1 / STRAIN 17)136 PUL06_HCMVA VIRION EPSTEIN-BARR VIRUS (STRAIN B95-8) 104– 313– 376–PROTEIN BBRF1 145 347 410 PUL06_HSV11 HYPOTHETICAL HUMAN CYTOMEGALOVIRUS216– PROTEIN UL6 (STRAIN AD169) 250 PUL06_HSVEB VIRION HERPES SIMPLEXVIRUS (TYPE  36– 103– 294– 337–  416– PROTEIN UL6 1 / STRAIN 17) 94 141329 371 479 PUL06_HSVSA VIRION GENE 56 EQUINE HERPESVIRUS TYPE 1  62–357– 448– PROTEIN (STRAIN AB4P) 170 413 503 PUL06_VZVD VIRION GENE 43HERPESVIRUS SAIMIRI  90– 151– 302– 364– PROTEIN (STRAIN 11) 140 194 336405 PUL08_HCMVA VIRION GENE 54 VARICELLA-ZOSTER VIRUS  87– 350– 704–PROTEIN (STRAIN DUMAS) 131 409 738 PUL09_HSVEB HYPOTHETICAL HUMANCYTOMEGALOVIRUS  6– PROTEIN UL8 (STRAIN AD169) 50 PUL09_VZVD ORIGIN OFEQUINE HERPESVIRUS TYPE 1 174– REPLICATION (STRAIN AB4P) 208 BINDINGPROTEIN PUL11_HCMVA ORIGIN OF VARICELLA-ZOSTER VIRUS 122– REPLICATION(STRAIN DUMAS) 163 BINDING PROTEIN PUL13_HCMVA NONSENSE PUL14_HCMVAHYPOTHETICAL HUMAN CYTOMEGALOVIRUS  47– 185– PROTEIN UL13 (STRAIN AD169)81 227 PUL14_HSVEB HYPOTHETICAL HUMAN CYTOMEGALOVIRUS 305– PROTEIN UL14(STRAIN AD169) 343 PUL14_PRVN3 HYPOTHETICAL EQUINE HERPESVIRUS TYPE 1 52– 246– GENE 48 (STRAIN AB4P) 96 283 PROTEIN PUL14_VZVD UL14PSEUDORABIES VIRUS (STRAIN N1A-3)  43– PROTEIN 95 HOMOLOG PUL16_HSVEBHYPOTHETICAL VARICELLA-ZOSTER VIRUS  61– GENE 46 (STRAIN DUMAS) 103PROTEIN PUL17_HSV6U GENE 46 EQUINE HERPESVIRUS TYPE 1 266– PROTEIN(STRAIN AB4P) 300 PUL21_HSVEB PROTEIN IOR HERPES SIMPLEX VIRUS (TYPE239– 6 / STRAIN UGANDA-1102 280 PUL23_HCMVA GENE 40 EQUINE HERPESVIRUSTYPE 1  44– 421– PROTEIN (STRAIN AB4P) 78 474 PUL24_HCMVA HYPOTHETICALHUMAN CYTOMEGALOVIRUS 213– PROTEIN UL23 (STRAIN AD169) 253 PUL24_ILTVTHYPOTHETICAL HUMAN CYTOMEGALOVIRUS  5– PROTEIN UL24 (STRAIN AD169) 39PUL25_HCMVA PROTEIN UL24 HOMOLOG INFECTIOUS LARYNGOTRACHEITIS 161– VIRUS(STRAIN THORNE V88 195 PUL25_HSV11 HYPOTHETICAL HUMAN CYTOMEGALOVIRUS255– 351– PROTEIN UL25 (STRAIN AD169) 341 399 PUL25_HSVEB VIRION HERPESSIMPLEX VIRUS (TYPE 370– PROTEIN UL25 1 / STRAIN 17) 411 PUL25_HSVSAVIRION EQUINE HERPESVIRUS TYPE 1 364– PROTEIN UL25 (STRAIN AB4P) 413PUL25_ILTVT VIRION GENE 19 HERPESVIRUS SAIMIRI  29– 183– 365– PROTEIN(STRAIN 11) 92 231 406 PUL25_VZVD 64.1 KD VIRION INFECTIOUSLARYNGOTRACHEITIS  38– 165– PROTEIN VIRUS (STRAIN THORNE V88 84 206PUL31_HCMVA 340– 380 PUL31_HSVEB HYPOTHETICAL HUMAN CYTOMEGALOVIRUS 244–PROTEIN UL31 (STRAIN AD169) 285 PUL31_VZVD GENE 29 EQUINE HERPESVIRUSTYPE 1 153– PROTEIN (STRAIN AB4P) 187 PUL32_HSVEB GENE 27VARICELLA-ZOSTER VIRUS 163– PROTEIN (STRAIN DUMAS) 197 PUL32_VZVD MAJORENVELOPE EQUINE HERPESVIRUS TYPE 1 342– GLYCOPROTEIN 300 (STRAIN AB4P)(STRAIN AB1) 376 PUL33_HCMVA PROBABLE VARICELLA-ZOSTER VIRUS  72– 296–MAJOR ENVELOPE (STRAIN DUMAS) 106 344 GLYCOPROTEIN 26 PUL33_VZVDG-PROTEIN HUMAN CYTOMEGALOVIRUS  94– 309– COUPLED (STRAIN AD169) 135 352RECEPTOR HOMOLOG UL33 PUL34_EBV GENE 25 VARICELLA-ZOSTER VIRUS  29–PROTEIN (STRAIN DUMAS) 63 PUL34_HCMVA BFRF1 EPSTEIN-BARR VIRUS (STRAIN159– PROTEIN B95-8) 200 PUL34_HSV11 HYPOTHETICAL HUMAN CYTOMEGALOVIRUS113– PROTEIN UL34 (STRAIN AD169) 147 PUL35_HCMVA VIRION HERPES SIMPLEXVIRUS (TYPE 187– PROTEIN UL34 1 / STRAIN 17) 221 PUL37_EBV HYPOTHETICALHUMAN CYTOMEGALOVIRUS 231– PROTEIN UL35 (STRAIN AD169) 268 PUL37_HSV11PROTEIN BOLF1 EPSTEIN-BARR VIRUS (STRAIN 708– B95-8) 742 PUL37_HSVEBPROTEIN UL37 HERPES SIMPLEX VIRUS (TYPE 853– 1 / STRAIN 17) 891PUL37_HSVSA GENE 23 EQUINE HERPESVIRUS TYPE 1  82– 311– 614– 715–  781–PROTEIN (STRAIN AD4P) 137 345 648 750 822 PUL37_VZVD GENE 63 HERPESVIRUSSAIMIRI (STRAIN 11)  6– 682– PROTEIN 65 741 PUL38_HCMVA GENE 21VARICELLA-ZOSTER VIRUS 719– 786– PROTEIN (STRAIN DUMAS). 753 827PUL41_VZVD HYPOTHETICAL HUMAN CYTOMEGALOVIRUS  10– PROTEIN UL38 (STRAINAD169) 51 PUL42_HSV11 HOST SHUTOFF VARICELLA-ZOSTER VIRUS 330– VIRION(STRAIN DUMAS) 366 PROTEIN PUL42_HSVEB DNA-BINDING HERPES SIMPLEX VIRUS(TYPE 134– 221– PROTEIN UL42 1 / STRAIN 17) 168 261 PUL43_HCMVADNA-BINDING EQUINE HERPESVIRUS TYPE 1 138– GENE 18 (STRAIN AB4P) 172PROTEIN PUL43_HSVE4 HYPOTHETICAL HUMAN CYTOMEGALOVIRUS  72– PROTEIN UL43(STRAIN AD169) 109 PUL43_VZVD MEMBRANE EQUINE HERPES VIRUS TYPE 4  27–PROTEIN UL43 (STRAIN 1942) 68 HOMOLOG PUL45_HSV1K GENE 15 MEMBRANEVARICELLA-ZOSTER VIRUS 312– PROTEIN (STRAIN DUMAS) 363 PUL45_HSV1MPROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE  96– 1 / STRAIN KOS) 137PUL47_HCMVA PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE  96– 1 / STRAIN MP)137 PUL47_HSV11 PROTEIN UL47 HUMAN CYTOMEGALOVIRUS 114– 448– 745–(STRAIN AD169) 165 485 856 PUL47_HSV1F VIRION HERPES SIMPLEX VIRUS (TYPE473– PROTEIN UL47 1 / STRAIN 17) 518 PUL47_HSVBP VIRION HERPES SIMPLEXVIRUS (TYPE 473– PROTEIN UL47 1 / STRAIN F 518 PUL47_HSVE4 80.7 KD ALPHABOVINE HERPESVIRUS TYPE 1 561– TRANS-INDUCING (STRAIN P8-2) 612 PROTEINPUL47_HSVEB 97 KD ALPHA EQUINE HERPESVIRUS TYPE 4 183– 582– 825–TRANS-INDUCING (STRAIN 1942) 246 620 866 PROTEIN PUL47_VZVD 97 KD ALPHAEQUINE HERPESVIRUS TYPE 1 219– 371– 817– TRANS-INDUCING (STRAIN AD4P)253 412 866 PROTEIN PUL50_HCMVA ALPHA VARICELLA-ZOSTER VIRUS  84– 156–664– TRANS-INDUCING (STRAIN DUMAS) 135 209 701 FACTOR 91.8 KD PROTEINPUL51_HSV11 PROTEIN UL50 HUMAN CYTOMEGALOVIRUS 155– (STRAIN AD169) 189PUL51_HSVE4 PROTEIN UL51 HERPES SIMPLEX VIRUS (TYPE 118– 1 / STRAIN 17)169 PUL51_HSVEB GENE 8 EQUINE HERPESVIRUS TYPE 4 121– PROTEIN (STRAIN1942) 162 PUL51_VZVD GENE 8 EQUINE HERPESVIRUS TYPE 1 120– PROTEIN(STRAIN AB4P) 161 PUL52_EBV GENE 7 VARICELLA-ZOSTER VIRUS 122– PROTEIN(STRAIN DUMAS) 163 PUL52_HSV11 PROBABLE DNA EPSTEIN-BARR VIRUS (STRAIN188– REPLICATION B95-8) 255 PROTEIN BSLF1 PUL52_HSVEB DNA HERPES SIMPLEXVIRUS (TYPE 189– REPLICATION 1 / STRAIN 17) 223 PROTEIN UL52 PUL52_HSVSADNA EQUINE HERPESVIRUS TYPE 1 141– 929– REPLICATION (STRAIN AB4P) 182970 PROTEIN UL52 PUL52_VZVD PROS ABU DNA HERPESVIRUS SAIMIRI (STRAIN 11)445– REPLICATION 483 GENE 56 PROTEIN PUL53_HCMVA PROBABLE DNAVARICELLA-ZOSTER VIRUS 301– REPLICATION (STRAIN DUMAS) 342 GENE 6PROTEIN PUL55_HSV2H PROTEIN UL53 HUMAN CYTOMEGALOVIRUS  12– (STRAINAD169) 48 PUL64_HCMVA PROTEIN UL55 HERPES SIMPLEX VIRUS (TYPE 151– 2 /STRAIN HG52) 185 PUL70_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS  32–PROTEIN UL64 (STRAIN AD169) 73 PUL74_HCMVA PROBABLE DNA HUMANCYTOMEGALOVIRUS  39– REPLICATION (STRAIN AD169) 99 PROTEIN UL70PUL87_HSV6U HYPOTHETICAL HUMAN CYTOMEGALOVIRUS  43– PROTEIN UL74 (STRAINAD169) 79 PUL87_HSVSA HYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE 729–PROTEIN 5R 6 / STRAIN UGANDA-1102) 770 PUL88_HCMVA HYPOTHETICALHERPESVIRUS SAIMIRI (STRAIN 11) 366– 582– GENE 24 400 616 PROTEINPUL91_HSVSA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS 357– PROTEIN UL88 (STRAINAD169) 391 PUL92_EBV HYPOTHETICAL HERPES VIRUS SAIMIRI  24– GENE 30(STRAIN 11) 58 PROTEIN PUL92_HCMVA HYPOTHETICAL EPSTEIN-BARR VIRUS(STRAIN B95-8) 107– 188– PROTEIN BDLF4 144 222 PUL92_HSV6U HYPOTHETICALHUMAN CYTOMEGALOVIRUS (STRAIN AD169)  79– PROTEIN UL92 116 PUL92_HSVSAHYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE 101– 174– PROTEIN 9R 6 / STRAINUGANDA-1102) 145 216 PUL93_HCMVA HYPOTHETICAL HERPESVIRUS SAIMIRI(STRAIN 11)  88– GENE 31 122 PROTEIN PUL95_HCMVA PROTEIN UL93 HUMANCYTOMEGALOVIRUS  23– 299– (STRAIN AD169) 57 384 PUL95_HSV6U HYPOTHETICALHUMAN CYTOMEGALOVIRUS  34– 259– PROTEIN UL95 (STRAIN AD169) 71 293PUL96_HCMVA HYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE  73– 213– PROTEIN13R 6 / STRAIN UGANDA-1102) 151 270 PUL96_HSV6U HYPOTHETICAL HUMANCYTOMEGALOVIRUS  51– PROTEIN UL96 (STRAIN AD169) 103 PUL96_HSVSAHYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE  50– PROTEIN 14R 6(STRAINUGANDA-1102) 113 PULA2_HCMVA HYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN11)  45– GENE 35 100 PROTEIN PULA4_HCMVA HYPOTHETICAL HUMANCYTOMEGALOVIRUS  6– 758– PROTEIN UL102 (STRAIN AD169) 40 792 PULD0_HCMVAVISION HUMAN CYTOMEGALOVIRUS  1– 130– 330– 439–  541– PROTEIN UL104(STRAIN AD169) 56 171 364 492 575 PUNG_HSV11 HYPOTHETICAL HUMANCYTOMEGALOVIRUS (STRAIN AD169)  84– PROTEIN UL130 125 PUNG_HSV23URACIL-DNA HERPES SIMPLEX VIRUS (TYPE 227– GLYCOSYLASE 1 / STRAIN 17)268 PUNG_HSV2H URACIL-DNA HERPES SIMPLEX VIRUS (TYPE 188– GLYCOSYLASE 2/ STRAIN 333) 229 PUNG_HSVSA URACIL-DNA HERPES SIMPLEX VIRUS (TYPE 148–GLYCOSYLASE 2 / STRAIN HG52 189 PUNG_SFVKA URACIL-DNA HERPES VIRUSSAIMIRI 135– GLYCOSYLASE (STRAIN 11) 176 PUS02_HSVEB URACIL-DNA SHOPEFIBROMA VIRUS (STRAIN  81– GLYCOSYLASE KASZA) 115 PUS02_HSVEX GENE 68EQUINE HERPESVIRUS TYPE 1  79– PROTEIN (STRAIN AD4P) 120 PUS07_HCMVA US1EQUINE HERPESVIRUS TYPE 1  86– PROTEIN (STRAIN KENTUCKY A) 120PUSH_HCMVA HYPOTHETICAL  2– PROTEIN 36 HXLFS PUS14_HCMVA HYPOTHETICALHUMAN CYTOMEGALOVIRUS PROTEIN (STRAIN AD169) HXLF1 PUS18_HCMVAHYPOTHETICAL HUMAN CYTOMEGALOVIRUS  3– PROTEIN (STRAIN AD169) 51 HVLF4PUS23_HCMVA MEMBRANE HUMAN CYTOMEGALOVIRUS 187– PROTEIN (STRAIN AD169)225 HWLF5 PUS24_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS 294– 535–PROTEIN (STRAIN AD169) 335 578 HHLF7 PUS26_HCMVA HYPOTHETICAL HUMANCYTOMEGALOVIRUS 135– PROTEIN (STRAIN AD169) 172 HHLF6 PUS27_HCMVAHYPOTHETICAL HUMAN CYTOMEGALOVIRUS 535– PROTEIN (STRAIN AD169) 584 HHLF5PUS30_HCMVA G-PROTEIN HUMAN CYTOMEGALOVIRUS  6– COUPLED (STRAIN AD169)40 RECEPTOR HOMOLOG US27 PV125_AMVLE HYPOTHETICAL HUMAN CYTOMEGALOVIRUS135– 274– PROTEIN (STRAIN AD169) 169 312 HHRF5 PV143_NPVAC 125 KDALFALFA MOSAIC VIRUS (STRAIN  18– 326– 591– PROTEIN 425 / ISOLATE LEIDEN52 367 649 PV16K_TRVPS HELICASE AUTOGRAPHA CALIFORNICA 313– 11114– 1179–  NUCLEAR POLYHEDROSIS VIRUS 350 1150 1213 PV16K_TRVSY 6 KD TOBACCORATTLE VIRUS  75– PROTEIN (STRAIN PSG) 117 PV1A_BBMV 16 KD TOBACCORATTLE VIRUS  75– PROTEIN (STRAIN SYM) 117 PV1A_BMV A BROAD BEAN MOTTLEVIRUS  21– 349– 492– 710–  837–  890– PROTEIN 55 405 526 751 884 924PV1A_CCMV A BROME MOSAIC VIRUS  4– 348– PROTEIN 66 411 PV1A_CMVFN ACOWPEA CHLOROTIC MOTTLE  4– 242– 348– 487– PROTEIN VIRUS 53 276 389 526PV1A_CMVO A CUCUMBER MOSAIC VIRUS  11– 393– 584– 868– PROTEIN (STRAINFNY) 66 434 619 916 PV1A_CMVQ A CUCUMBER MOSAIC VIRUS  11– 393– 584–868– PROTEIN (STRAIN O) 66 434 619 916 PV1A_PSVJ A CUCUMBER MOSAIC VIRUS 11– 393– PROTEIN (STRAIN Q) 66 434 PV1A_TAV A PEANUT STUNT VIRUS(STRAIN J)  4– PROTEIN 66 PV23K_HSVTH A TOMATO ASPERMY VIRUS  11– 392–857– PROTEIN 59 433 923 PV24K_BDV 23.5 KD TURKEY HERPESVIRUS (STRAIN H2)177– PROTEIN 211 PV25K_NPVAC 24 KD ANTIGEN BORNA DISEASE VIRUS  63– 130–121 171 PV28K_PLRV1 25 KD AUTOGRAPHA CALIFORNICA  4– PROTEIN NUCLEARPOLYHEDROSIS VIRUS 50 PV28K_PLRVW 28 KD POTATO LEAFROLL VIRUS (STRAIN 1)116– PROTEIN 150 PV290_ASFLS 28 KD POTATO LEAFROLL VIRUS 116– PROTEIN(STRAIN WAGENINGEN) 150 PV29K_PEBV L1S 290 AFRICAN SWINE FEVER VIRUS138– PROTEIN (STRAIN L1S57) 183 PV29K_THVSY 29.6 KD EARLY BROWNING VIRUS115– PROTEIN 192 PV29K_TRVTC 29 KD TOBACCO RATTLE VIRUS (STRAIN 167–PROTEIN SYM), AND (STRAIN PSG) 201 PV2A_CCMV 29 KD TOBACCO RATTLE VIRUS 45– PROTEIN (STRAIN TCM) 79 PV2A_CMVFN 2A COWPEA CHLOROTIC MOTTLE 768–PROTEIN VIRUS 806 PV2A_PSVJ 2A CUCUMBER MOSAIC VIRUS 386– PROTEIN(STRAIN FNY) 420 PV2A_TAV 2A PEANUT STUNT VIRUS (STRAIN 3) 717– PROTEIN751 PV30K_TRVTC 2A TOMATO ASPERMY VIRUS 722– PROTEIN 756 PV360_ASFB729.1 KD TOBACCO RATTLE VIRUS 105– PROTEIN (STRAIN TCM) 218 PV362_ASFB7K′360 AFRICAN SWINE FEVER VIRUS  53– 151– PROTEIN (STRAIN BA71V) 87 192PV363_ASFB7 K′362 AFRICAN SWINE FEVER VIRUS  54– 161– 290– PROTEIN(STRAIN BA71V) 102 212 324 PV3A_BMV D′363 AFRICAN SWINE FEVER VIRUS 153–PROTEIN (STRAIN BA71V) 199 PV3A_CMVFN 3A BROME MOSAIC VIRUS  11– PROTEIN45 PV3A_CMVM 3A CUCUMBER MOSAIC VIRUS 215– PROTEIN (STRAIN FNY) 255PV3A_CMVO 3A CUCUMBER MOSAIC VIRUS 215– PROTEIN (STRAIN M) 255 PV3A_CMVY3A CUCUMBER MOSAIC VIRUS 215– PROTEIN (STRAIN O) 255 PV51K_ACLSV 3ACUCUMBER MOSAIC VIRUS 215– PROTEIN (STRAIN Y) 255 PV51K_BWYVF 50.8 KDAPPLE CHLOROTIC LEAF SPOT  72– PROTEIN VIRUS 106 PV51K_BWYVG 51 KD BEETWESTERN YELLOWS VIRUS 113– 196– 404– PROTEIN (ISOLATE FL-1) 147 233 451PV56K_PLRV1 51 KD BEET WESTERN YELLOWS VIRUS 113– 196– 407– PROTEIN(ISOLATE GB1) 147 233 451 PV56K_PLRVW 56 KD POTATO LEAFROLL VIRUS  47–438– PROTEIN (STRAIN 1) 81 472 PV58K_BSMV 56 KD POTATO LEAFROLL VIRUS 47– 438– PROTEIN (STRAIN WAGENINGEN) 81 475 PV66K_BWYVF 58 KD BARLEYSTRIPE MOSAIC VIRUS 128– 323– PROTEIN 162 371 PV70K_PLRV1 66.2 KD BEETWESTERN YELLOWS VIRUS 480– PROTEIN (ISOLATE FL-1) 521 PV70K_PLRVW 69.7KD POTATO LEAFROLL VIRUS  98– 514– PROTEIN (STRAIN 1) 144 548PV90K_AMVLE 69.7 KD POTATO LEAFROLL VIRUS  98– 409– 514– PROTEIN (STRAINWAGENINGEN) 144 443 548 PVA04_VACCC 90 KD ALFALFA MOSAIC VIRUS (STRAIN107– PROTEIN 425 / ISOLATE LEIDEN) 141 PVA04_VACCV PROTEIN A4 VACCINIAVIRUS (STRAIN  32– 231– COPENHAGEN) 66 275 PVA04_VARV PROTEIN A4VACCINIA VIRUS (STRAIN WR)  32– 231– 66 275 PVA06_VACCC PROTEIN A4VARIOLA VIRUS  22– 210– 66 265 PVA06_VACCV PROTEIN A6 VACCINIA VIRUS(STRAIN  97– 314– COPENHAGEN) 213 355 PVA06_VARV PROTEIN A6 VACCINIAVIRUS (STRAIN WR)  96– 313– 212 354 PVAO8_VACCC PROTEIN A6 VARIOLA VIRUS 97– 313– 213 358 PVA08_VARV PROTEIN A8 VACCINIA VIRUS (STRAIN 176–COPENHAGEN) 236 PVA09_VACCC PROTEIN A8 VARIOLA VIRUS 176– 236 PVA09_VARVPROTEIN A9 VACCINIA VIRUS (STRAIN  46– COPENHAGEN) 81 PVA11_VACCCPROTEIN A9 VARIOLA VIRUS  46– 95 PVA11_VARV PROTEIN A11 VACCINIA VIRUS(STRAIN  97– 141– 219– COPENHAGEN) 134 175 283 PVA12_VACCC PROTEIN A11VARIOLA VIRUS  98– 220– 176 284 PVA12_VARV PROTEIN A12 VACCINIA VIRUS(STRAIN 114– COPENHAGEN) 148 PVA18_VACCC PROTEIN A12 VARIOLA VIRUS 111–152 PVA18_VACCV 56 KD VACCINIA VIRUS (STRAIN 433– ABORTIVE LATECOPENHAGEN 467 PROTEIN PVA18_VARV 56 KD VACCINIA VIRUS (STRAIN WR) 307–433– ABORTIVE LATE 341 467 PROTEIN PVA20_VACCC 56 KD VARIOLA VIRUS 307–433– ABORTIVE LATE 341 467 PROTEIN PVA20_VARV PROTEIN A20 VACCINIA VIRUS(STRAIN  1– COPENHAGEN) 67 PVA22_VACCC PROTEIN A20 VARIOLA VIRUS  1– 67PVA12_VARV PROTEIN A22 VACCINIA VIRUS (STRAIN  28– COPENHAGEN) 69PVA23_VACCC PROTEIN A22 VARIOLA VIRUS  39– 80 PVA23_VARV PROTEIN A23VACCINIA VIRUS (STRAIN  95– 173– 255– 344– COPENHAGEN) 143 207 289 382PVA31_VARV PROTEIN A23 VARIOLA VIRUS  95– 173– 255– 344– 143 207 289 382PVA32_VACCV PROTEIN A31 VARIOLA VIRUS  88– 126 PVA32_VARV PROTEIN A32VACCINIA VIRUS (STRAIN WR), AND (STRAIN COPENHAGEN PVA33_VARV PROTEINA32 VARIOLA VIRUS 217– 251 PVA36_VACCV PROTEIN A33 VARIOLA VIRUS  63– 97PVA36_VARV PROTEIN A36 VACCINIA VIRUS (STRAIN WR),  26– 109– PRECURSORAND (STRAIN COPENHAGEN) 67 155 PVA37_VACCC PROTEIN A36 VARIOLA VIRUS 26– PRECURSOR 67 PVA37_VACCV PROTEIN A37 VACCINIA VIRUS (STRAIN  24–COPENHAGEN) 65 PVA38_VACCC PROTEIN A37 VACCINIA VIRUS (STRAIN WR)  24–65 PVA38_VACCV PROTEIN A38 VACCINIA VIRUS (STRAIN  44– COPENHAGEN) 91PVA38_VARV PROTEIN A38 VACCINIA VIRUS (STRAIN WR)  44– 91 PVA39_VACCCPROTEIN A38 VARIOLA VIRUS  44– 91 PVA39_VACCV PROTEIN A39 VACCINIA VIRUS(STRAIN  37– COPENHAGEN) 71 PVA46_VACCC PROTEIN A39 VACCINIA VIRUS(STRAIN WR)  75– 109 PVA46_VACCV PROTEIN A46 VACCINIA VIRUS (STRAIN  81–COPENHAGEN) 126 PVA46_VARV PROTEIN A46 VACCINIA VIRUS (STRAIN WR)  81–126 PVA47_VACCC PROTEIN A46 VARIOLA VIRUS  81– 126 PVA47_VACCV PROTEINA47 VACCINIA VIRUS (STRAIN  62– 143– COPENHAGEN) 96 184 PVA47_VARVPROTEIN A47 VACCINIA VIRUS (STRAIN WR)  62– 143– 96 184 ALLMOT15 MOTIFSEARCH RESULTS PVA49_VACCC PROTEIN A47 VARIOLA VIRUS  62– 143– 96 184PVA49_VACCV PROTEIN A49 VACCINIA VIRUS (STRAIN  3– 126– COPENHAGEN) 40160 PVA49_VARV PROTEIN A49 VACCINIA VIRUS (STRAIN WR)  3– 126– 40 160PVA52_VACCC PROTEIN A49 VARIOLA VIRUS  3– 126– 40 160 PVA52_VACCVPROTEIN A52 VACCINIA VIRUS (STRAIN  91– COPENHAGEN) 132 PVA57_VACCCPROTEIN A52 VACCINIA VIRUS (STRAIN WR)  91– 132 PVA57_VACCV GUANYLATEVACCINIA VIRUS (STRAIN 134– KINASE COPENHAGEN) 168 HOMOLOG PVAL1_MSVKGUANYLATE VACCINIA VIRUS (STRAIN WR) 134– KINASE 168 HOMOLOG PVAL1_MSVNAL1 MAIZE STREAK VIRUS (KENYAN 230– PROTEIN ISOLATE) 269 PVAL1_MSVS AL1MAIZE STREAK VIRUS 228– PROTEIN (NIGERIAN ISOLATE) 262 PVAL1_SLCV AL1MAIZE STREAK VIRUS (SOUTH- 228– PROTEIN AFRICAN ISOLATE) 262 PVAL1_TYBVAAL1 SQUASH LEAF CURL VIRUS 117– PROTEIN 151 PVAL3_ABMVW AL1 TOBACCOYELLOW DWARF VIRUS 191– PROTEIN (STRAIN AUSTRALIA) 225 PVAL3_BGMV AL3ABUTILON MOSAIC VIRUS  44–  83– PROTEIN (ISOLATE WEST INDIA) 78 124PVAL3_PYMVV AL3 BEAN GOLDEN MOSAIC VIRUS  44–  83– PROTEIN 78 124PVAL3_SLCV AL3 POTATO YELLOW MOSAIC VIRUS  30–  87– PROTEIN (ISOLATEVENEZUELA) 78 121 PVAL3_TGMV AL3 SQUASH LEAF CURL VIRUS  46–  91–PROTEIN 80 125 PVAT_CAMVC AL3 TOMATO GOLDEN MOSAIC VIRUS  44– PROTEIN 78PVAT_CAMVD APHID CAULIFLOWER MOSAIC VIRUS  22–  84– TRANSMISSION (STRAINCM-1841) 70 127 PROTEIN PVAT_CAMVE APHID CAULIFLOWER MOSAIC VIRUS  22–TRANSMISSION (STRAIN D/11) 70 PROTEIN PVAT_CAMVN APHID CAULIFLOWERMOSAIC VIRUS  22–  93– TRANSMISSION (STRAIN BBC) 70 127 PROTEINPVAT_CAMVP APHID CAULIFLOWER MOSAIC VIRUS  22–  93– TRANSMISSION (STRAINNY8153) 70 127 PROTEIN PVAT_CAMVS APHID CAULIFLOWER MOSAIC VIRUS  22– 93– TRANSMISSION (STRAIN PV147) 70 127 PROTEIN PVAT_CAMVW APHIDCAULIFLOWER MOSAIC VIRUS  22–  93– TRANSMISSION (STRAIN STRASBOURG) 70130 PROTEIN PVAT_CERV APHID CAULIFLOWER MOSAIC VIRUS  36– TRANSMISSION(STRAIN W260) 70 PROTEIN PVB03_VACCV APHID CARNATION ETCHED RING VIRUS 99– TRANSMISSION 138 PROTEIN PVB04_VACCC PROTEIN B3 VACCINIA VIRUS(STRAIN WR) 108– 142 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN  89–321– 496– COPENHAGEN) 123 372 530 PVB04_VARV PROTEIN B4 VACCINIA VIRUS(STRAIN WR)  89– 321– 123 372 PVB05_VACC0 PROTEIN B4 VARIOLA VIRUS  89–324– 492– 134 372 530 PVB05_VACCC PLAQUE-SIZE / VACCINIA VIRUS (STRAIN254– HOST RANGE LC16MO) 298 PROTEIN PRECURSOR PVB05_VACCL PLAQUE-SIZE /VACCINIA VIRUS (STRAIN 254– HOST RANGE COPENHAGEN) 298 PROTEIN PRECURSORPVB05_VACCV PLAQUE-SIZE / VACCINIA VIRUS (STRAIN 254– HOST RANGE LISTER)298 PROTEIN PRECURSOR PVB07_VACCV PLAQUE-SIZE / VACCINIA VIRUS (STRAINWR) 254– HOST RANGE 298 PROTEIN PRECURSOR PVB08_VACCC PROTEIN B7VACCINIA VIRUS (STRAIN WR),  28– PRECURSOR AND (STRAIN COPENHAGEN) 62PVB08_VACCV PROTEIN B8 VACCINIA VIRUS (STRAIN  26– PRECURSOR COPENHAGEN)60 PVB18_VACCC PROTEIN B8 VACCINIA VIRUS (STRAIN WR)  26– PRECURSOR 60PVB18_VACCV PROTEIN B18 VACCINIA VIRUS (STRAIN 337– 491– COPENHAGEN) 375532 PVB18_VARV PROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337– 491– 375 532PVB19_VACCC PROTEIN B18 VARIOLA VIRUS 337– 491– 378 532 PVB19_VACCDSURFACE VACCINIA VIRUS (STRAIN  87– ANTIGEN S COPENHAGEN) 121 PRECURSORPVB19_VACCV SURFACE VACCINIA VIRUS (STRAIN  85– ANTIGEN S DAIREN 1) 119PRECURSOR PVB20_VACCC SURFACE VACCINIA VIRUS (STRAIN WR)  85– ANTIGEN S119 PRECURSOR PVB21_VACCV PROTEIN B20 VACCINIA VIRUS (STRAIN  48–COPENHAGEN) 85 PVBL1_BGMV PROTEIN B21 VACCINIA VIRUS (STRAIN WR)  61– 95PVBL1_SLCV BL1 BEAN GOLDEN MOSAIC VIRUS 159– PROTEIN 193 PVBL1_TGMV BL1SQUASH LEAF CURL VIRUS 159– PROTEIN 193 PVBR1_BGMV BL1 TOMATO GOLDENMOSAIC VIRUS 159– PROTEIN 193 PVBR1_SLCV BR1 BEAN GOLDEN MOSAIC VIRUS172– PROTEIN 206 PVBR1_TGMV BR1 SQUASH LEAF CURL VIRUS  20– PROTEIN 61PVC02_VACCC BR1 TOMATO GOLDEN MOSAIC VIRUS  25– PROTEIN 59 PVC02_VACCVPROTEIN C3 VACCINIA VIRUS (STRAIN  37– 262– 391– COPENHAGEN) 82 302 412PVC04_SFVKA PROTEIN C2 VACCINIA VIRUS (STRAIN WR)  37– 262– 391– 82 302442 PVC04_VACCC PROTEIN C4 SHOPE FIBROMA VIRUS (STRAIN 175– 374– KASZA)223 408 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN  12– COPENHAGEN)46 PVC04_VARV PROTEIN C4 VACCINIA VIRUS (STRAIN WR)  12– 46 PVC05_SFVKAPROTEIN C4 VARIOLA VIRUS  12– 46 PVC05_VACCC HYPOTHETICAL SHOPE FIBROMAVIRUS (STRAIN  82– PROTEIN C5 KASZA) 125 PVC05_VACCV PROTEIN C5 VACCINIAVIRUS (STRAIN  31– COPENHAGEN) 68 PVC05_VARV PROTEIN C5 VACCINIA VIRUS(STRAIN WR)  31– 68 PVC08_SFVKA PROTEIN C5 VARIOLA VIRUS  32–  73– 70121 PVC09_SFVKA HYPOTHETICAL SHOPE FIBROMA VIRUS (STRAIN  45– PROTEIN C8KASZA) 86 PVC09_VACCC HYPOTHETICAL SHOPE FIBROMA VIRUS (STRAIN  63–PROTEIN C9 KASZA) 106 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN  82–168– 289– 575– COPENHAGEN) 116 226 325 612 PVC10_VACCC PROTEIN C9VACCINIA VIRUS (STRAIN WR)  82– 168– 299– 575– 116 226 323 612PVC10_VACCV PROTEIN VACCINIA VIRUS (STRAIN 136– C10 COPENHAGEN) 180PVC10_VARV PROTEIN VACCINIA VIRUS (STRAIN WR) 136– C10 176 PVC12_SFVKAPROTEIN VARIOLA VIRUS 136– C10 170 PVC13_SFVKA HYPOTHETICAL SHOPEFIBROMA VIRUS (STRAIN  2– PROTEIN C12 KASZA) 36 PVC16_VACCC PROTEIN C13SHOPE FIBROMA VIRUS (STRAIN  3– 137– 189– KASZA) 66 182 240 PVC17_VACCCPROTEIN VACCINIA VIRUS (STRAIN 142– C16/B22 COPENHAGEN) 176 PVC18_VACCCPROTEIN VACCINIA VIRUS (STRAIN 100– 325– C17/B23 COPENHAGEN) 155 359PVC19_SFVKA PROTEIN VACCINIA VIRUS (STRAIN  40– C18/B24 COPENHAGEN) 98PVC19_VACCC PROTEIN C19 SHOPE FIBROMA VIRUS (STRAIN  56– KASZA) 97PVCAP_EBV PROTEIN VACCINIA VIRUS (STRAIN 218– C19/B25 COPENHAGEN) 252PVCAP_HCMVA MAJOR CAPSID EPSTEIN-BARR VIRUS (STRAIN B95-8) 150– 670–PROTEIN 184 709 PVCAP_HSV11 MAJOR CAPSID HUMAN CYTOMEGALOVIRUS 136– 191–260– PROTEIN (STRAIN AD169) 174 225 294 PVCAP_HSV6U MAJOR CAPSID HERPESSIMPLEX VIRUS (TYPE 116– 308– PROTEIN 1 / STRAIN 17) 175 356 PVCAP_HSVEBMAJOR CAPSID HERPES SIMPLEX VIRUS 136– 230– 311– PROTEIN 174 266 382PVCAP_HSVSA MAJOR CAPSID EQUINE HERPESVIRUS TYPE 1 150– 304– PROTEIN(STRAIN AB4P) 184 352 PVCAP_PRV1S MAJOR CAPSID HERPES VIRUS SAIMIRI 479–673– 755– PROTEIN (STRAIN 11) 520 714 799 PVCAP_VZVD MAJOR CAPSIDPSEUDORABIES VIRUS (STRAIN 105– 292– PROTEIN INDIANA 5) 160 326PVCG3_NPVAC MAJOR CAPSID VARICELLA-ZOSTER VIRUS 128– 316– PROTEIN(STRAIN DUMAS) 198 350 PVD05_FOWP1 DNA-BINDING AUTOGRAPHA CAUFORNICA110– PROTEIN NUCLEAR POLYHEDROSIS VIRUS 248 PVD05_VACCC 92.6 KD FOWLPOXVIRUS (STRAIN FP-1) 145– PROTEIN 181 PVD05_VACCV PROTEIN D5 VACCINIAVIRUS (STRAIN 123– COPENHAGEN) 157 PVD05_VARV PROTEIN D5 VACCINIA VIRUS(STRAIN WR) 123– 157 PVD09_VACCC PROTEIN D5 VARIOLA VIRUS 123– 157PVD09_VACCV PROTEIN D9 VACCINIA VIRUS (STRAIN 126– COPENHAGEN) 160PVD09_VARV PROTEIN D9 VACCINIA VIRUS (STRAIN WR) 126– 160 PVD10_FOWP1PROTEIN D9 VARIOLA VIRUS 126– 160 PVD10_SFVKA PROTEIN D10 FOWLPOX VIRUS(STRAIN FP-1)  65– 188– 99 222 PVD10_VARV PROTEIN D10 SHOPE FIBROMAVIRUS (STRAIN  4– KASZA) 52 PVDBP_CAMVC PROTEIN D10 VARIOLA VIRUS  67–105 PVDBP_CAMVD DNA-BINDING CAULIFLOWER MOSAIC VIRUS 1– PROTEIN (STRAINCM-1841)  35 PVDBP_CAMVE DNA-BINDING CAULIFLOWER MOSAIC VIRUS   1–PROTEIN (STRAIN D/H) 35 PVDBP_CAMVN DNA-BINDING CAULIFLOWER MOSAIC VIRUS1– PROTEIN (STRAIN BBC) 35 PVDBP_CAMVS DNA-BINDING CAULIFLOWER MOSAICVIRUS  1– PROTEIN (STRAIN NY8153) 35 PVE02_VACCC DNA-BINDING CAULIFLOWERMOSAIC VIRUS   – PROTEIN (STRAIN STRASBOURG) 35 PVE02_VACCV PROTEIN E2VACCINIA VIRUS (STRAIN 282– COPENHAGEN) 336 PVE02_VARV PROTEIN E2VACCINIA VIRUS (STRAIN WR) 282– 336 PVE03_VACCC PROTEIN E2 VARIOLA VIRUS282– 336 PVE03_VACCV PROTEIN E3 VACCINIA VIRUS (STRAIN  17– COPENHAGEN)61 PVE03_VARV PROTEIN E3 VACCINIA VIRUS (STRAIN WR)  17– 61 PVE05_VACCCPROTEIN E3 VARIOLA VIRUS  17– 61 PVE05_VACCD PROTEIN E5 VACCINIA VIRUS(STRAIN  28– COPENHAGEN) 93 PVE05_VACCV PROTEIN E5 VACCINIA VIRUS(STRAIN  38– DAIREN 1) 103 PVE05_VARV PROTEIN E5 VACCINIA VIRUS (STRAINWR)  38– 103 PVE06_VACCC PROTEIN E5 VARIOLA VIRUS  38– 103 PVE06_VACCVPROTEIN E6 VACCINIA VIRUS (STRAIN 105– 232– COPENHAGEN) 139 266PVE06_VARV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 105– 232– 139 266PVE18_NPVAC PROTEIN E6 VARIOLA VIRUS 105– 367– 139 401 PVE1_HPV1A EARLY18.5 KD AUTOGRAPHA CALIFORNICA 112– PROTEIN NUCLEAR POLYHEDROSIS VIRUS163 PVE1_HPV31 E1 HUMAN PAPILLOMA VIRUS TYPE 1A 137– PROTEIN 171PVE1_HPV33 E1 HUMAN PAPILLOMA VIRUS TYPE 31  56– PROTEIN 90 PVE1_HPV35E1 HUMAN PAPILLOMA VIRUS TYPE 33  33– 133– PROTEIN 67 167 PVE1_HPV39 E1HUMAN PAPILLOMA VIRUS TYPE 35  56– PROTEIN 90 PVE1_HPV41 E1 HUMANPAPILLOMA VIRUS TYPE 39  59– PROTEIN 96 PVE1_HPV42 E1 HUMAN PAPILLOMAVIRUS TYPE 41  55– 312– PROTEIN 89 346 PVE1_HPV58 E1 HUMAN PAPILLOMAVIRUS TYPE 42  25– PROTEIN 87 PVE1_HPV6B E1 HUMAN PAPILLOMA VIRUS TYPE58  33– 119– PROTEIN 67 174 PVE1_PAPVE E1 HUMAN PAPILLOMA VIRUS TYPE 6B265– PROTEIN 299 PVE26_NPVAC E1 EUROPEAN ELK PAPILLOMA VIRUS 176–PROTEIN 210 PVE2_CRPVK EARLY 25.9 KD AUTOGRAPHA CALIFORNICA  72– PROTEINNUCLEAR POLYHEDROSIS VIRUS 117 PVE2_HPV05 PROBABLE E2 COTTONTAIL RABBIT(SHOPE)  3– PROTEIN PAPILLOMA VIRUS (STRAIN KANS 44 PVE2_HPV08 PROBABLEE2 HUMAN PAPILLOMA VIRUS TYPE 5  5– 276– 342– 437– PROTEIN 57 310 383471 PVE2_HPV16 PROBABLE E2 HUMAN PAPILLOMA VIRUS TYPE 8  5– 148– PROTEIN55 182 PVE2_HPV18 E2 HUMAN PAPILLOMA VIRUS TYPE 16  61– 315– PROTEIN 105349 PVE2_HPV1A E2 HUMAN PAPILLOMA VIRUS TYPE 18  65– PROTEIN 100PVE2_HPV2A E2 HUMAN PAPILLOMA VIRUS TYPE 1A  3– 159– PROTEIN 37 193PVE2_HPV31 E2 HUMAN PAPILLOMA VIRUS TYPE 2A  13– 159– PROTEIN 47 193PVE2_HPV33 E2 HUMAN PAPILLOMA VIRUS TYPE 31  61– PROTEIN 105 PVE2_HPV35E2 HUMAN PAPILLOMA VIRUS TYPE 33  63– 297– PROTEIN 101 331 PVE2_HPV39 E2HUMAN PAPILLOMA VIRUS TYPE 35  62– 158– PROTEIN 106 192 PVE2_HPV41 E2HUMAN PAPILLOMA VIRUS TYPE 39  74– 323– PROTEIN 110 357 PVE2_HPV47 E2HUMAN PAPILLOMA VIRUS TYPE 41  6– PROTEIN 54 PVE2_HPV51 E2 HUMANPAPILLOMA VIRUS TYPE 47  5– 148– PROTEIN 55 182 PVE2_HPV57 E2 HUMANPAPILLOMA VIRUS TYPE 51 154– PROTEIN 191 PVE2_HPV58 E2 HUMAN PAPILLOMAVIRUS TYPE 57  13– 179– PROTEIN 47 213 PVE2_HPV5B E2 HUMAN PAPILLOMAVIRUS TYPE 58  2– PROTEIN 36 PVE2_PAPVD PROBABLE E2 HUMAN PAPILLOMAVIRUS TYPE 5B  5– PROTEIN 57 PVE2_PAPVE PROBABLE E2 DEER PAPILLOMA VIRUS107– PROTEIN 141 PVE2_PCPV1 PROBABLE E2 EUROPEAN ELK PAPILLOMA VIRUS113– PROTEIN 150 PVE2_RHPV1 E2 PYGMY CHIMPANZEE PAPILLOMA 318– PROTEINVIRUS TYPE 1 361 PVE39_NPVAC E2 RHESUS PAPILLOMA VIRUS TYPE 1  62– 307–PROTEIN 106 341 PVE39_NPVOP EARLY 39 KD AUTOGRAPHA CALIFORNICA  20–PROTEIN NUCLEAR POLYHEDROSIS VIRUS 57 PVE4_HPV18 EARLY 39 KD ORGYIAPSEUDOTSUGATA 119– PROTEIN MULTICAPSID POLYHEDROSIS VIRUS 156 PVE4_HPV41PROBABLE E4 HUMAN PAPILLOMA VIRUS TYPE 18  42– PROTEIN 86 PVE5_HPV5BPROBABLE E4 HUMAN PAPILLOMA VIRUS TYPE 41  63– PROTEIN 97 PVEF_GVTNPROBABLE E5 HUMAN PAPILLOMA VIRUS TYPE 5B  3–  96– PROTEIN 40 130PVENV_BEV VIRAL ENHANCING TRICHOPLUSIA N1 GRANULOSIS 681– FACTOR (VEF)VIRUS (TNGV) 719 (104 KD GLYCOP PVENV_DHV11 ENVELOPE BERNE VIRUS (BEV)195– PROTEIN 229 PVENV_MCV1 ENVELOPE DHORI VIRUS (STRAIN 318–GLYCOPROTEIN INDIAN/1313/61) (DHO) 366 PRECURSOR PVENV_MCV2 MAJORENVELOPE MOLLUSCUM CONTAGIOSUM VIRUS 252– PROTEIN (43 KD SUBTYPE 1(MCV1) 286 PROTEIN) (P43K) PVENV_THOGV MAJOR ENVELOPE MOLLUSCUMCONTAGIOSUM VIRUS 252– PROTEIN (43 KD SUBTYPE 2 (MCV15) 286 PROTEIN)(P43K PVENV_VACCC ENVELOPE THOGOTO VIRUS (THO) 313– GLYCOPROTEIN 354PRECURSOR (SURFACE PVENV_VACC1 MAJOR ENVELOPE VACCINIA VIRUS 257–PROTEIN (37 KD (STRAIN COPENHAGEN) 295 PROTEIN) (P37K PVENV_VACCP MAJORENVELOPE VACCINIA VIRUS (STRAIN 1HD-J) 257– PROTEIN (37 KD 295 PROTEIN)(P37K PVENV_VACCV MAJOR ENVELOPE VACCINIA VIRUS (STRAIN L-1VP) 257–PROTEIN (37 KD 295 PROTEIN) (P37K PVENV_VARV MAJOR ENVELOPE VACCINIAVIRUS (STRAIN WR) 257– PROTEIN (37 KD 295 PROTEIN) (P37K PVETS_NPVACMAJOR ENVELOPE VARIOLA VIRUS 257– PROTEIN (37 KD 295 PROTEIN) (P37KPVF01_VACCC ECORI-T SITE AUTOGRAPHA CALIFORNICA  1– PROTEIN ETS NUCLEARPOLYHEDROSIS VIRUS ( 53 PVF01_VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN 46– 124– COPENHAGEN), AND VACCINIA VIRUS 80 158 PVF03_VACCC PROTEIN F1VACCINIA VIRUS (STRAIN WR)  46– 124– (FRAGMENT) 80 158 PVF03_VACCVPROTEIN F3 VACCINIA VIRUS (STRAIN  71– COPENHAGEN) 110 PVF05_VACCCPROTEIN F3 VACCINIA VIRUS (STRAIN WR)  71– 110 PVF05_VACCP 36 KD MAJORVACCINIA VIRUS (STRAIN  81– 282– MEMBRANE COPENHAGEN) 129 320 PROTEINPRECURSOR PVF05_VACCV 36 KD MAJOR VACCINIA VIRUS (STRAIN L-IVP)  81–282– MEMBRANE 129 320 PROTEIN PRECURSOR PVF05_VARV 36 KD MAJOR VACCINIAVIRUS (STRAIN WR)  81– 283– MEMBRANE 129 321 PROTEIN PRECURSORPVF06_VARV 36 KD MAJOR VARIOLA VIRUS  81– 281– MEMBRANE 122 322 PROTEINPRECURSOR PVF11_VACCC PROTEIN F6 VARIOLA VIRUS  8– 44 PVF11_VACCPPROTEIN F11 VACCINIA VIRUS (STRAIN 217– 269– COPENHAGEN) 258 315PVF11_VARV PROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP) 213– 265– 254 311PVF12_VACCC PROTEIN F11 VARIOLA VIRUS  41– 269– 75 315 PVF12_VACCPPROTEIN F12 VACCINIA VIRUS (STRAIN  1– 102– 199– 350–  544– COPENHAGEN)67 143 236 388 581 PVF12_VARV PROTEIN F12 VACCINIA VIRUS (STRAIN L-IVP) 1– 102– 199– 350–  544– 67 143 236 388 581 PVF16_VACCC PROTEIN F12VARIOLA VIRUS  1– 199– 350– 547– 67 236 388 581 PVF16_VACCP PROTEIN F16VACCINIA VIRUS (STRAIN 155– COPENHAGEN) 194 PVF16_VARV PROTEIN F16VACCINIA VIRUS (STRAIN L-IVP) 155– 194 PVFP3_FOWPV PROTEIN F16 VARIOLAVIRUS 155– 194 PVFP4_FOWPV PROTEIN FP3 FOWLPOX VIRUS  1– 43 PVFP7_FOWPVPROTEIN FP4 FOWLPOX VIRUS 139– 239– 173 273 PVFPL_FOWP1 PROTEIN FP7FOWLPOX VIRUS  23– 57 PVFUS_VACCC FPLEFT FOWLPOX VIRUS (STRAIN FP-1) 77– PROTEIN (FRAGMENT) 111 PVFUS_VACCV 14 KD FUSION VACCINIA VIRUS(STRAIN  30– PROTEIN COPENHAGEN) 64 PVG01_HSV11 4 KD FUSION VACCINIAVIRUS (STRAIN WR)  30– PROTEIN 64 PVG01_VACCC HYPOTHETICAL ICTALURIDHERPESVIRUS 1 271– 512– 591– 730– GENE 1 (CHANNEL CATFISH VIRUS) (CCV)306 563 647 764 PROTEIN PVG01_VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN301– COPENHAGEN) 339 PVG01_VARV PROTEIN G1 VACCINIA VIRUS (STRAIN WR)240– (FRAGMENT) 278 PVG03_HSVEB PROTEIN G1 VARIOLA VIRUS 301– 339PVG03_HSVEK GENE 3 EQUINE HERPESVIRUS TYPE 1 143– PROTEIN (STRAIN AB4P)(EHV-1) 177 PVG03_VARV GENE 3 EQUINE HERPESVIRUS TYPE I 143– PROTEIN(ORF L1) (STRAIN KENTUCKY A) (EHV-1) 177 PVG05_VACCC PROTEIN G3 VARIOLAVIRUS  64– 98 PVG05_VARV PROTEIN G5 VACCINIA VIRUS (STRAIN 117– 255–355– COPENHAGEN) 158 289 389 PVG06_HSV11 PROTEIN G5 VARIOLA VIRUS 117–255– 355– 158 289 389 PVG07_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 61– GENE 6 MEMBRANE (CHANNEL CATFISH VIRUS) (CCV) 109 PROTEINPVG07_VACCC HYPOTHETICAL ICTALURID HERPESVIRUS 1  69– GENE 7 MEMBRANE(CHANNEL CATFISH VIRUS) (CCV) 103 PROTEIN PVG07_VARV PROTEIN G7 VACCINIAVIRUS (STRAIN 114– 324– COPENHAGEN) 175 358 PVG09_VACCC PROTEIN G7VARIOLA VIRUS 114– 324– 175 358 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS(STRAIN 304– (PROTEIN G9) COPENHAGEN) 338 PVG09_VARV PROTEIN F1 VACCINIAVIRUS (STRAIN WR) 304– (PROTEIN G9) (FRAGMENT) 338 PVG10_HSV11 PROTEINF1 VARIOLA VIRUS 304– (PROTEIN G9) 338 PVG12_SPV1R HYPOTHETICALICTALURID HERPES VIRUS 1  63– GENE 10 MEMBRANE (CHANNEL CATFISH VIRUS)(CCV) 97 PROTEIN PVG16_HSVSA GENE 12 SPIROPLASMA VIRUS SPV1-R8A2 B  11–PROTEIN 45 PVG17_HSV11 HYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11)  58–GENE 16 95 PROTEIN PVG18_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1  92–177– GENE 17 (CHANNEL CATFISH VIRUS) (CCV) 129 211 PROTEIN PVG1L_AMEPVHYPOTHETICAL ICTALURID HERPESVIRUS 1 174– 215– GENE 18 (CHANNEL CATFISHVIRUS) (CCV) 208 256 PROTEIN PVG1_SPV1R G1L AMSACTA MOOREI 407– PROTEINENTOMOPOXVIRUS (AMEPV) 441 PVG1_SPV4 CAPSID SPIROPLASMA VIRUS SPV1-R8A2B 136– 256– 320– PROTEIN 170 297 357 PVG22_HSV11 CAPSID SPIROPLASMAVIRUS 4 (SPV4) 287– PROTEIN 321 PVG24_HSV11 HYPOTHETICAL ICTALURIDHERPESVIRUS 1 117– 437– 660– 899– GENE 22 (CHANNEL CATFISH VIRUS) (CCV)158 629 892 1055 PROTEIN PVG27_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS1  7–  74– GENE 24 (CHANNEL CATFISH VIRUS) (CCV) 72 108 PROTEINPVG28_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 164– GENE 27 (CHANNELCATFISH VIRUS) (CCV) 219 PROTEIN PVG2R_AMEPV HYPOTHETICAL ICTALURIDHERPESVIRUS 1 253– GENE 28 (CHANNEL CATFISH VIRUS) (CCV) 290 PROTEINPVG2_SPV1R HYPOTHETICAL AMSACTA MOOREI  29– 184– G2R ENTOMOPOXVIRUS(AMEPV) 63 218 PROTEIN PVG2_SPV4 GENE 2 SPIROPLASMA VIRUS SPV1-R8A2 B222– 285– PROTEIN 256 326 PVG33_HSV11 GENE 2 SPIROPLASMA VIRUS 4 (SPV4)255– PROTEIN 310 PVG34_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 149–GENE 3) (CHANNEL CATFISH VIRUS) (CCV) 183 PROTEIN PVG35_HSV11HYPOTHETICAL ICTALURID HERPESVIRUS 1 345– GENE 34 (CHANNEL CATFISHVIRUS) (CCV) 379 PROTEIN PVG37_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS1  17– GENE 35 (CHANNEL CATFISH VIRUS) (CCV) 90 PROTEIN PVG38_HSV11HYPOTHETICAL ICTALURID HERPESVIRUS 1 435– GENE 37 (CHANNEL CATFISHVIRUS) [CCV 472 PROTEIN PVG39_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 84– GENE 38 (CHANNEL CATFISH VIRUS) (CCV) 118 PROTEIN PVG3_SPV1RHYPOTHETICAL ICTALURID HERPESVIRUS 1 124– 266– GENE 39 (CHANNEL CATFISHVIRUS) (CCV) 158 300_ PROTEIN PVG3_SPV4 GENE 3 SPIROPLASMA VIRUSSPV1-R8A2 I)  8– 162– 203– PROTEIN 49 196 244 PVG43_HSV11 GENE 3SPIROPLASMA VIRUS 4 (SPV4)  6–  87– PROTEIN 54 121 PVG45_HSVSAHYPOTHETICAL ICTALURID HERPESVIRUS 1 116– 262– 324– 643– GENE 43(CHANNEL CATFISH VIRUS) (CCV) 150 296 361 677 PROTEIN PVG46_HSV11HYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11) 121– GENE 45 162 PROTEINPVG48_HSV11 PROBABLE ICTALURID HERPESVIRUS 1  45– 939– 1251–  MAJOR(CHANNEL CATFISH VIRUS) (CCV) 86 1078 1321 GLYCOPROTEIN PVG48_HSVSAHYPOTHETICAL ICTALURID HERPESVIRUS 1 169– GENE 48 (CHANNEL CATFISHVIRUS) (CCV) 207 PROTEIN PVG49_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI(STRAIN 11) 360– 611– 733– GENE 48 417 666 767 PROTEIN PVG4R_AMEPVHYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN II)  68– GENE 49 102 PROTEINPVG4_SPV4 G4R AMSACTA MOOREI  4– PROTEIN ENTOMOPOXVIRUS (AMEPV) 38PVG51_HSV11 GENE 4 SPIROPLASMA VIRUS 4 (SPV4)  89– PROTEIN 130PVG51_HSVSA HYPOTHETICAL ICTALURID HERPESVIRUS 1  34–  89– GENE 51(CHANNEL CATFISH VIRUS) (CCV) 73 123 MEMBRANE PROTEIN PVG53_HSV11 GENE51 HERPESVIRUS SAIMIRI (STRAIN 11)  29– 123– 162– GLYCOPROTEIN 70 157196 PVG54_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1  67– GENE 53(CHANNEL CATFISH VIRUS) (CCV) 127 PROTEIN PVG55_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 355– GENE 54 (CHANNEL CATFISH VIRUS) (CCV) 396PROTEIN PVG55_HSVSA HYPOTHETICAL ICTALURID HERPESVIRUS 1 101– GENE 55(CHANNEL CATFISH VIRUS) (CCV) 135 PROTEIN PVG56_HSV11 HYPOTHETICALHERPESVIRUS SAIMIRI (STRAIN 11) 126– GENE 55 178 PROTEIN PVG59_HSV11HYPOTHETICAL ICTALURID HERPESVIRUS 1 131– 578– 644– 750–  846– 1111–GENE 56 (CHANNEL CATFISH VIRUS) (CCV) 192 612 678 784 880 1145 PROTEINPVG59_HSVSA HYPOTHETICAL ICTALURID HERPESVIRUS 1  10–  89– GENE 59(CHANNEL CATFISH VIRUS) (CCV) 72 123 MEMBRANE PROTEIN PVG5_SPV1R GENE 59HERPESVIRUS SAIMIRI (STRAIN II) 169– PROTEIN 209 PVG61_HSV11 GENE 5SPIROPLASMA VIRUS SPV1-R8A2 B  65– PROTEIN 103 PVG63_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 265– GENE 61 (CHANNEL CATFISH VIRUS) (CCV) 299PROTEIN PVG65_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 546– GENE 63(CHANNEL CATFISH VIRUS) (CCV) 584 PROTEIN PVG66_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 805– 1213–  GENE 65 (CHANNEL CATFISH VIRUS)(CCV) 839 1254 PROTEIN PVG67_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1154– 328– GENE 66 (CHANNEL CATFISH VIRUS) (CCV) 188 410 PROTEINPVG68_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 379– 501– 1321–  1478– GENE 67 (CHANNEL CATFISH VIRUS) (CCV) 413 546 1369 1541 PROTEINPVG72_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 245– GENE 68 (CHANNELCATFISH VIRUS) (CCV) 288 PROTEIN PVG75_HSV11 HYPOTHETICAL ICTALURIDHERPESVIRUS 1 447– 723– 912– GENE 72 (CHANNEL CATFISH VIRUS) (CCV) 484757 949 PROTEIN PVG8_SPV1R HYPOTHETICAL ICTALURID HERPESVIRUS 1 271–388– GENE 75 (CHANNEL CATFISH VIRUS) (CCV) 305 422 PROTEIN PVGF1_IBVBGENE 8 SPIROPLASMA VIRUS SPV1-R8A2 B  5– PROTEIN 51 PVGH3_HCMVA F1 AVIANINFECTIOUS BRONCHITIS VIRUS 142– 1233–  2119–  3388–  3475– 3517– 3761–PROTEIN (STRAIN BEAUDETTE) (1 179 1267 2156 3424 3513 3556 3795PVGL1_CVPR8 GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS H301 (STRAIN AD169)PRECURSOR PVGL2_CVBF EL GLYCOPROTEIN PORCINE RESPIRATORY CORONA VIRUS212– PRECURSOR (STRAIN 86/137004 / BR1 257 (MATRIX GLYCOP PVGL2_CVBL9 E2GLYCOPROTEIN BOVINE CORONA VIRUS (STRAIN 642– 850– 993– 1263–  PRECURSORF15 676 885 1088 1305 (SPIKE GLYCOPRO PVGL2_CVBLY E2 GLYCOPROTEIN BOVINECORONA VIRUS (STRAIN 850– 993– 1263–  PRECURSOR L9) 885 1109 1305 (SPIKEGLYCOPRO PVGL2_CVBM E2 GLYCOPROTEIN BOVINE CORONA VIRUS (STRAIN 642–850– 993– 1263–  PRECURSOR LY-138) 676 885 1109 1305 (SPIKE GLYCOPROPVGL2_CVBQ E2 GLYCOPROTEIN BOVINE CORONA VIRUS (STRAIN 642– 850– 993–1263–  PRECURSOR MEBUS 676 885 1109 1305 (SPIKE GLYCOPRO PVGL2_CVBV E2GLYCOPROTEIN BOVINE CORONA VIRUS (STRAIN 642– 850– 993– 1263–  PRECURSORQUEBEC) 676 885 1109 1305 (SPIKE GLYCOPRO PVGL2_CVH22 E2 GLYCOPROTEINBOVINE CORONA VIRUS (STRAIN 642– 850– 993– 1260–  PRECURSOR VACCINE) 676885 1109 1305 (SPIKE GLYCOPRO PVGL2_CVM4 E2 GLYCOPROTEIN HUMAN CORONAVIRUS (STRAIN 229E) 770– 1055–  PRECURSOR 916 1112 (SPIKE GLYCOPROPVGL2_CVMA5 E2 GLYCOPROTEIN MURINE CORONA VIRUS MHV 643– 1001–  1270– PRECURSOR (STRAIN WILD TYPE 4) (MHV-4) 684 1117 1315 (SPIKE GLYCOPROPVGL2_CVM1C E2 GLYCOPROTEIN MURINE CORONA VIRUS MHV 591– 949– 1218– PRECURSOR (STRAIN A59) 632 1079 1263 (SPIKE GLYCOPRO PVGL2_CVM1H E2GLYCOPROTEIN MURINE CORONA VIRUS MHV 643– 1001–  1270–  PRECURSOR(STRAIN JHMV / VARIANT CL-2) 684 1117 1315 (SPIKE GLYCOPRO PVGL2_CVPFSE2 GLYCOPROTEIN MURINE CORONA VIRUS MHV 503– 860– 1129–  PRECURSOR(STRAIN JHM) 543 976 1174 (SPIKE GLYCOPRO PVGL2_CVPM1 E2 GLYCOPROTEINPORCINE TRANSMISSIBLE  69– 448– 692– 889– 1040– 1352– PRECURSORGASTROENTERITIS CORONA VIRUS (S 110 482 733 923 1186 1389 (SPIKEGLYCOPRO PVGL2_CVPPR E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE  69– 448–692– 889– 1040– 1352– PRECURSOR GASTROENTERITIS CORONA VIRUS (S 110 482733 923 1186 1389 (SPIKE GLYCOPRO PVGL2_CVPPU E2 GLYCOPROTEIN PORCINETRANSMISSIBLE  70– 446– 690– 887– 1038– 1350– PRECURSOR GASTROENTERITISCORONA VIRUS (S 110 480 731 921 1184 1387 (SPIKE GLYCOPRO PVGL2_CVPR8 E2GLYCOPROTEIN PORCINE TRANSMISSIBLE  69– 446– 690– 887– 1038– 1350–PRECURSOR GASTROENTERITIS CORONA VIRUS (S 110 480 731 921 1184 1387(SPIKE GLYCOPRO PVGL2_CVPRM E2 GLYCOPROTEIN PORCINE RESPIRATORY CORONAVIRUS 224– 468– 665– 816– 1128– PRECURSOR (STRAIN 86/137004 / BRIT 258509 699 962 1165 (SPIKE GLYCOPRO PVGL2_CVPRT E2 GLYCOPROTEIN PORCINERESPIRATORY CORONA 224– 468– 665– 816– 1128– PRECURSOR VIRUS (STRAINRM4) (PRCV) 258 509 699 962 1165 (SPIKE GLYCOPRO PVGL2_EBV E2GLYCOPROTEIN PORCINE TRANSMISSIBLE  69– 446– 690– 887– 1038– 1350–PRECURSOR GASTROENTERITIS CORONA VIRUS (S 110 480 731 921 1184 1387(SPIKE GLYCOPRO PVGL2_F1PV PROBABLE  68– MEMBRANE 102 GLYCOPROTEINPVGL2_IBV6 E2 GLYCOPROTEIN FELINE INFECTIOUS PERITONITIS 189– 451– 695–892– 1043– 1355– PRECURSOR VIRUS (STRAIN 79-1146) 245 485 736 926 11891392 PVGL2_IBVB E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 791–1057–  PRECURSOR (STRAIN 6/82) 905 1091 PVGL2_IBVD2 E2 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS VIRUS 437– 772– 1056–  PRECURSOR (STRAINBEAUDETTE) 478 904 1090 PVGL2_IBVK E2 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS 773– 1057–  PRECURSOR (STRAIN D274) 905 1091 PVGL2_IBVME2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 437– 772– 1056– PRECURSOR (STRAIN KD8523) 478 904 1090 PVGLB_HCMVA E2 GLYCOPROTEIN AVIANINFECTIOUS BRONCHITIS VIRUS 437– 772– 1056–  PRECURSOR (STRAIN M41) 478904 1090 PVGLB_HCMVT GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN  43–128– 436– 844– B PRECURSOR AD169) 88 162 484 878 PVGLB_HSV11GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN  22– 128– 437– 451–  845– BPRECURSOR TOWNE) 88 162 478 485 879 PVGLB_HSV1F GLYCOPROTEIN HERPESSIMPLEX VIRUS (TYPE 1 828– B PRECURSOR / STRAIN 17) 890 PVGLB_HSV1KGLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE 1 827– B PRECURSOR / STRAIN F)]889 PVGLB_HSV1P GLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE 1 827– BPRECURSOR / STRAIN KOS) 889 PVGLB_HSV23 GLYCOPROTEIN HERPES SIMPLEXVIRUS (TYPE 1 828– B PRECURSOR / STRAIN PATTON) 890 PVGLB_HSV2HGLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE 2 828– B PRECURSOR / STRAIN 333)890 PVGLB_HSV2S GLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE 2 828– BPRECURSOR / STRAIN HG52) 890 PVGLB_HSV6U GLYCOPROTEIN HERPES SIMPLEXVIRUS (TYPE 2 817– B PRECURSOR / STRAIN 5A8) 871 PVGLB_HSVB1GLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE 6  37– 185– / STRAINUGANDA-1102) 71 223 PVGLB_HSVB2 GLYCOPROTEIN BOVINE HERPESVIRUS TYPE 1859– 1 PRECURSOR 913 PVGLB_HSVBC GLYCOPROTEIN BOVINE HERPESVIRUS TYPE 2(STRAIN BMV) 440– 848– B-1 PRECURSOR 474 902 PVGLB_HSVE1 GLYCOPROTEINBOVINE HERPESVIRUS TYPE 1 863– 1 PRECURSOR (STRAIN COOPER) 900PVGLB_HSVE4 GLYCOPROTEIN EQUINE HERPESVIRUS TYPE 1 542– 911– B PRECURSOR(ISOLATE HVS25A) 576 961 PVGLB_HSVEA GLYCOPROTEIN EQUINE HERPESVIRUSTYPE 4 474– 847– B PRECURSOR (STRAIN 1942) 515 900 PVGLB_HSVEBGLYCOPROTEIN EQUINE HERPESVIRUS TYPE 1 542– 911– B PRECURSOR (STRAINAB1) 576 961 PVGLB_HSVEL GLYCOPROTEIN EQUINE HERPESVIRUS TYPE 1 542–911– B PRECURSOR (STRAIN AB4P) 576 961 PVGLB_HSVMD GLYCOPROTEIN EQUINEHERPESVIRUS TYPE 1 542– 910– 8 PRECURSOR (STRAIN KENTUCKY D) 576 960PVGLB_HSVSA GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 390– 649– 787– BPRECURSOR (STRAIN RD-1B) 435 683 845 PVGLB_MCMVS GLYCOPROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 240– 406– B PRECURSOR 288 447PVGLB_PRV1F GLYCOPROTEIN B MURINE CYTOMEGALOVIRUS 206– 427– 693– 744– 860– PRECURSOR (STRAIN SMITH) 260 475 734 778 894 PVGLB_VZVDGLYCOPROTEIN PSEUDORABIES VIRUS (STRAIN 847– G11 PRECURSORINDIANA-FUNKHAUSER / BECKE 881 PVGLC_HSV11 GLYCOPROTEIN VARICELLA-ZOSTERVIRUS  92– 596– 809– B PRECURSOR (STRAIN DUMAS) 133 630 867 PVGLC_HSV1KGLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE 469– C PRECURSOR 1 / STRAIN 17)510 PVGLC_HSV2 GLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE 469– C PRECURSOR1 / STRAIN KOS) 510 PVGLC_HSV23 GLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE2) 442– C PRECURSOR 476 PVGLC_HSVBC GLYCOPROTEIN HERPES SIMPLEX VIRUS(TYPE 443– C PRECURSOR 2 / STRAIN 333) 477 PVGLC_HSVEB GLYCOPROTEINBOVINE HERPESVIRUS TYPE 1 235– G111 PRECURSOR (STRAIN COOPER) 269PVGLC_HSVMB GLYCOPROTEIN EQUINE HERPESVIRUS TYPE 1 182– C PRECURSOR(STRAIN AB4P) AND (STRAIN KEN 218 PVGLC_HSVMD SECRETORY MAREK'S DISEASE 63– GLYCOPROTEIN HERPESVIRUS (STRAIN BC-1) 97 GP57-65 PRECURSORPVGLC_HSVMG SECRETORY MAREK'S DISEASE  63– GLYCOPROTEIN HERPESVIRUS(STRAIN RD-1B) 97 GP57-65 PRECURSOR PVGLC_HSVMM SECRETORY MAREK'SDISEASE  62– GLYCOPROTEIN HERPESVIRUS (STRAIN GA) 96 GP57-65 PRECURSORPVGLC_PRV1F SECRETORY MAREK'S DISEASE HERPESVIRUS  63– GLYCOPROTEIN(STRAIN MD5) 97 GP57-65 PRECURSOR PVGLC_VZVD GLYCOPROTEIN PSEUDORABIESVIRUS (STRAIN 183– GUI INDIANA-FUNKHAUSER / BECKE 235 PRECURSORPVGLC_VZVS GLYCOPROTEIN VARICELLA-ZOSTER VIRUS 280– GPV (STRAIN DUMAS)321 PVGLD_HSVEA GLYCOPROTEIN VARICELLA-ZOSTER VIRUS 280– GPV (STRAINSCOTT) 321 PVGLD_HSVEB GLYCOPROTEIN D EQUINE HERPESVIRUS TYPE 1  89–PRECURSOR (STRAIN AB1) 123 PVGLD_HSVEK GLYCOPROTEIN D EQUINE HERPESVIRUSTYPE 1 139– PRECURSOR (STRAIN AB4P) AND (STRAIN KEN 173 PVGLE_HSV11GLYCOPROTEIN D EQUINE HERPESVIRUS TYPE 1 139– PRECURSOR (STRAIN KENTUCKYA) 173 PVGLE_HSV2 GLYCOPROTEIN E HERPES SIMPLEX VIRUS 111– PRECURSOR(TYPE 1 / STRAIN 17) 145 PVGLF_BRSVA GLYCOPROTEIN E HERPES SIMPLEX VIRUS(TYPE 2) 111– PRECURSOR 159 PVGLF_BRSVC FUSION BOVINE RESPIRATORYSYNCYTIAL 146– 504– GLYCOPROTEIN VIRUS (STRAIN A51908) 202 545 PRECURSORPVGLF_BRSVR FUSION BOVINE RESPIRATORY SYNCYTIAL 146– 267– 506–GLYCOPROTEIN VIRUS (STRAIN COPENHAGE 202 302 547 PRECURSOR PVGLF_CDVOFUSION BOVINE RESPIRATORY SYNCYTIAL 146– 267– 506– GLYCOPROTEIN VIRUS(STRAIN RB94) 202 302 554 PRECURSOR PVGLF_HRSV1 FUSION CANINE DISTEMPERVIRUS 228– 340– 568– GLYCOPROTEIN (STRAIN ONDERSTEPOORT) 297 381 602PRECURSOR PVGLF_HRSVA FUSION HUMAN RESPIRATORY SYNCYTIAL 116– 267– 506–GLYCOPROTEIN VIRUS (SUBGROUP B / STRAI 203 302 549 PRECURSOR PVGLF_HRSV1FUSION HUMAN RESPIRATORY SYNCYTIAL 116– 267– 506– GLYCOPROTEIN VIRUS(STRAIN A2 202 302 549 PRECURSOR PVGLF_HRSVR FUSION HUMAN RESPIRATORYSYNCYTIAL 116– 267– 506– GLYCOPROTEIN VIRUS (SUBGROUP A / STRAI 202 302547 PRECURSOR PVGLF_MEASE FUSION HUMAN RESPIRATORY SYNCYTIAL 116– 267–506– GLYCOPROTEIN VIRUS (STRAIN RSS-2) 202 302 549 PRECURSOR PVGLF_MEAS1FUSION MEASLES VIRUS (STRAIN 116– 228– 452– GLYCOPROTEIN EDMONSTON) AND(STRAIN HALLE) 184 269 500 PRECURSOR PVGLF_MEASY FUSION MEASLES VIRUS(STRAIN IP-J-CA) 119– 231– 455– GLYCOPROTEIN 187 272 50) PRECURSORPVGLB_MUMP1 FUSION MEASLES VIRUS (STRAIN 116– 228– 452– GLYCOPROTEINYAMAGATA-1) 184 269 500 PRECURSOR PVGLF_MUMPM FUSION MUMPS VIRUS (STRAINSBL-1)  20– 103– 235– 447– GLYCOPROTEIN 54 179 272 502 PRECURSORPVGLF_MUMPR FUSION MUMPS VIRUS (STRAIN  20– 103– 235– 447– GLYCOPROTEINMIYAHARA VACCINE) 54 179 272 502 PRECURSOR PVGLF_MUMPS FUSION MUMPSVIRUS (STRAIN RW)  20– 103– 235– 447– GLYCOPROTEIN 54 179 272 502PRECURSOR PVGLF_NDVA FUSION MUMPS VIRUS (STRAIN SOL)  20– 103– 235– 447–GLYCOPROTEIN 54 179 272 502 PRECURSOR PVGLF_NDVB FUSION NEWCASTLEDISEASE VIRUS 117– 231– 426– GLYCOPROTEIN (STRAIN AUSTRALIA-VICTORIA/32)182 272 512 PRECURSOR PVGLF_NDVH3 FUSION NEWCASTLE DISEASE VIRUS 122–231– 426– GLYCOPROTEIN (STRAIN BEAUDETTE C/45) 182 272 517 PRECURSORPVGLF_NDVH4 FUSION NEWCASTLE DISEASE VIRUS 117– 231– 426– GLYCOPROTEIN(STRAIN HER/33) 182 272 517 PRECURSOR PVGLF_NDV1 FUSION NEWCASTLEDISEASE VIRUS 122– 231– 426– GLYCOPROTEIN (STRAIN B1-HITCHNER/47) 182272 517 PRECURSOR PVGLF_NDVL FUSION NEWCASTLE DISEASE VIRUS 133– 238–426– GLYCOPROTEIN (STRAIN ITALIEN/45) 182 272 517 PRECURSOR PVGLF_NDVMFUSION NEWCASTLE DISEASE VIRUS 133– 231– 426– GLYCOPROTEIN (STRAINLAS/46) 182 272 517 PRECURSOR PVGLF_NDVQ FUSION NEWCASTLE DISEASE VIRUS117– 231– 426– GLYCOPROTEIN (STRAIN MIYADERA/51) 182 272 512 PRECURSORPVGLF_NDVT FUSION NEWCASTLE DISEASE VIRUS 122– 231– 433– GLYCOPROTEIN(STRAIN QUEENSLAND/66) 182 272 512 PRECURSOR PVGLF_NDVTG FUSIONNEWCASTLE DISEASE VIRUS 117– 231– 426– GLYCOPROTEIN (STRAIN TEXAS) 182272 517 PRECURSOR PVGLF_NDVU FUSION NEWCASTLE DISEASE VIRUS 122– 231–426– GLYCOPROTEIN (STRAIN TEXAS G.B./48) 182 272 517 PRECURSORPVGLF_PHODV FUSION NEWCASTLE DISEASE VIRUS 122– 231– 426– GLYCOPROTEIN(STRAIN ULSTER/67) 182 272 512 PRECURSOR PVGLF_P11HC FUSION PHOCINEDISTEMPER VIRUS  29– 197– 309– 533– GLYCOPROTEIN 63 266 350 581PRECURSOR PVGLF_P12H FUSION HUMAN PARAINFLUENZA 1 VIRUS 123– 207– 459–GLYCOPROTEIN (STRAIN C39) 174 267 503 PRECURSOR PVGLF_P12HG FUSION HUMANPARAINFLUENZA 2 VIRUS  93– 477– GLYCOPROTEIN 183 528 PRECURSORPVGLF_P12HT FUSION HUMAN PARAINFLUENZA 2 VIRUS  93– 477– GLYCOPROTEIN(STRAIN GREER) 183 528 PRECURSOR PVGLF_P13B FUSION HUMAN PARAINFLUENZA 2VIRUS  93– 477– GLYCOPROTEIN (STRAIN TOSHIBA) 185 528 PRECURSORPVGLF_P13H4 FUSION BOVINE PARAINFLUENZA 3 VIRUS 117– 207– 456–GLYCOPROTEIN 182 241 518 PRECURSOR PVGLF_R1NDK FUSION HUMANPARAINFLUENZA 3 VIRUS 117– 207– 462– GLYCOPROTEIN (STRAIN NIH 47885) 182241 532 PRECURSOR PVGLF_R1NDL FUSION RINDERPEST VIRUS (STRAIN 112– 224–448– GLYCOPROTEIN KABETE O) 180 265 493 PRECURSOR PVGLF_SEND5 FUSIONRINDERPEST VIRUS (STRAIN L) 112– 224– 448– GLYCOPROTEIN 180 265 506PRECURSOR PVGLF_SENDF FUSION SENDAI VIRUS (STRAIN Z / 127– 211– 463–GLYCOPROTEIN HOST MUTANTS) 188 271 533 PRECURSOR PVGLF_SENDH FUSIONSENDAI VIRUS (STRAIN 127– 211– 463– GLYCOPROTEIN FUSHIMI) 188 271 533PRECURSOR PVGLF_SEND1 FUSION SENDAI VIRUS (STRAIN HARRIS) 127– 218– 463–GLYCOPROTEIN 188 271 533 PRECURSOR PVGLF_SENDZ FUSION SENDAI VIRUS(STRAIN HVJ) 127– 211– 463– GLYCOPROTEIN 188 271 533 PRECURSORPVGLF_SV41 FUSION SENDAI VIRUS (STRAIN Z) 127– 211– 463– GLYCOPROTEIN188 271 533 PRECURSOR PVGLF_SV5 FUSION SIMIAN VIRUS 41  96– 454–GLYCOPROTEIN 186 508 PRECURSOR PVGLF_TRTV FUSION SIMIAN VIRUS 5 (STRAINW3) 103– 241– 451– GLYCOPROTEIN 171 275 487 PRECURSOR PVGLG_BEFV FUSIONTURKEY RHINOTRACHEITIS VIRUS ( 105– 190– 457– GLYCOPROTEIN 161 224 498PRECURSOR PVGLG_BRSVC SPIKE BOVINE EPHEMERAL FEVER VIRUS 506–GLYCOPROTEIN 612 PRECURSOR PVGLG_HRSV1 MAJOR BOVINE RESPIRATORYSYNCYTIAL  30– 104– SURFACE VIRUS (STRAIN COPENHAGE 70 138 GLYCOPROTEING PVGLG_HRSV2 MAJOR HUMAN RESPIRATORY SYNCYTIAL  30– SURFACE VIRUS(SUBGROUP B / STRAI 81 GLYCOPROTEIN G PVGLG_HRSV3 MAJOR HUMANRESPIRATORY SYNCYTIAL  30– SURFACE VIRUS (STRAIN RSB642 85 GLYCOPROTEING PVGLG_HRSV4 MAJOR HUMAN RESPIRATORY SYNCYTIAL  30– SURFACE VIRUS(STRAIN RSB1734 85 GLYCOPROTEIN G PVGLG_HRSV5 MAJOR HUMAN RESPIRATORYSYNCYTIAL  30– SURFACE VIRUS (STRAIN RSB5857) 107 GLYCOPROTEIN GPVGLG_HRSV6 MAJOR HUMAN RESPIRATORY SYNCYTIAL  30– SURFACE VIRUS (STRAINRSB6190) 85 GLYCOPROTEIN G PVGLG_HRSV7 MAJOR HUMAN RESPIRATORY SYNCYTIAL 30– SURFACE VIRUS (STRAIN RSB6256) 85 GLYCOPROTEIN G PVGLG_HRSV8 MAJORHUMAN RESPIRATORY SYNCYTIAL  30– SURFACE VIRUS (STRAIN RSB6614) 85GLYCOPROTEIN G PVGLG_HRSVA MAJOR HUMAN RESPIRATORY SYNCYTIAL  30–SURFACE VIRUS (SUBGROUP B / STRAI 81 GLYCOPROTEIN G PVGLG_HRSVL MAJORHUMAN RESPIRATORY SYNCYTIAL  30– SURFACE VIRUS (STRAIN A2) 67GLYCOPROTEIN G PVGLG_HSVE4 MAJOR HUMAN RESPIRATORY SYNCYTIAL  25–SURFACE VIRUS (SUBGROUP A / STRAI 85 GLYCOPROTEIN G PVGLG_S1GMAGLYCOPROTEIN G EQUINE HERPESVIRUS TYPE 4 271– PRECURSOR (STRAIN 1942)305 PVGLG_SYNV SPIKE SIGMA VIRUS 344– 464– GLYCOPROTEIN 381 498PRECURSOR PVGLG_VNSV0 SPIKE SONCHUS YELLOW NET VIRUS 488– GLYCOPROTEIN523 PRECURSOR PVGLG_VSV1G SPIKE VIRAL HEMORRHAGIC 363– GLYCOPROTEINSEPTICEMIA VIRUS (STRAIN 07-71) 397 PRECURSOR PVGLH_EBV SPIKE VESICULARSTOMATITIS VIRUS 476– GLYCOPROTEIN (SEROTYPE INDIANA / STRAIN C 510PRECURSOR PVGLH_HCMVA GLYCOPROTEIN EPSTEIN-BARR VIRUS (STRAIN 895-8) 53– 160– 336– 653– GP85 87 201 380 694 PRECURSOR PVGLH_HCMVTGLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 103– 270– 693– PRECURSOR (STRAINAD169) 137 311 741 PVGLH_HSV11 GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 102–692– PRECURSOR (STRAIN TOWNE) 136 740 PVGLH_HSV1E GLYCOPROTEIN H HERPESSIMPLEX VIRUS (TYPE 447– PRECURSOR 1 / STRAIN 17) 481 PVGLH_HSV6GGLYCOPROTEIN H HERPES SIMPLEX VIRUS (TYPE 447– PRECURSOR 1 / STRAINHFEM) 481 PVGLH_HSVBC GLYCOPROTEIN H HERPES SIMPLEX VIRUS (TYPE 357–PRECURSOR 6 / STRAIN GS) 406 PVGLH_HSVE4 GLYCOPROTEIN H BOVINEHERPESVIRUS TYPE 1 364– PRECURSOR (STRAIN COOPER) 416 PVGLH_HSVEBGLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 4 334– 414– PRECURSOR (STRAIN1942) 379 455 PVGLH_HSVSA GLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 1 327–407– PRECURSOR (STRAIN AB4P) AND (ISOLATE HV 372 448 PVGLH_MCMVSGLYCOPROTEIN H HERPESVIRUS SAIMIRI (STRAIN 11)  32– 374– 664– PRECURSOR66 453 712 PVGLH_PRVKA GLYCOPROTEIN H MURINE CYTOMEGALOVIRUS 440–PRECURSOR (STRAIN SMITH 474 PVGLH_PRVN3 GLYCOPROTEIN H PSEUDORABIESVIRUS (STRAIN 226– PRECURSOR KAPLAN) 260 PVGLH_PRVP1 GLYCOPROTEIN HPSEUDORABIES VIRUS (STRAIN N1A-3) 226– PRECURSOR 260 PVGLH_VZVDGLYCOPROTEIN H PSEUDORABIES VIRUS (STRAIN RICE) 226– PRECURSOR 260PVGL1_HCMVA PROBABLE VARICELLA-ZOSTER VIRUS 455– GLYCOPROTEIN (STRAINDUMAS) 506 H PRECURSOR PVGLM_BUNGE IMMEDIATE HUMAN CYTOMEGALOVIRUS  47–323– EARLY (STRAIN AD169) 111 359 GLYCOPROTEIN PRECURSOR PVGLM_BUNL7 MPOLYPROTEIN BUNYA VIRUS GERMISTON 512– 685– 1228–  PRECURSOR 567 7371262 PVGLM_BUNSH M POLYPROTEIN BUNYA VIRUS LA CROSSE 643– 916– PRECURSOR(ISOLATE L74) 677 950 PVGLM_BUNYW M POLYPROTEIN BUNYA VIRUS SNOWSHOEHARE 643– PRECURSOR 677 PVGLM_DUGBV M POLYPROTEIN BUNYAMWERA VIRUS 340–504– 905– PRECURSOR 374 563 939 PVGLM_HANTB M POLYPROTEIN DUGBE VIRUS937– 1239–  PRECURSOR 989 1300 PVGLM_HANTH M POLYPROTEIN HANTAAN VIRUS(STRAIN B-1) 693– PRECURSOR 727 PVGLM_HANTL M POLYPROTEIN HANTAAN VIRUS(STRAIN HOJO)  72– PRECURSOR 106 PVGLM_HANTV M POLYPROTEIN HANTAAN VIRUS(STRAIN LEE)  72– PRECURSOR 106 PVGLM_INSV M POLYPROTEIN HANTAAN VIRUS(STRAIN 76-118)  72– PRECURSOR 106 PVGLM_PHV M POLYPROTEIN IMPATIENSNECROTIC SPOT 1067–  PRECURSOR VIRUS 1101 PVGLM_PTPV M POLYPROTEINPROSPECT HILL VIRUS  73– PRECURSOR 111 PVGLM_SEOUB M POLYPROTEIN PUNTATORO PHLEBOVIRUS 149– PRECURSOR 251 PVGLM_SEOUR M POLYPROTEIN SEOULVIRUS (STRAIN 80-39) 693– PRECURSOR 727 PVGLM_SEOUS M POLYPROTEIN SEOULVIRUS (STRAIN R22) 694– PRECURSOR 728 PVGLN_BEFV M POLYPROTEIN SEOULVIRUS (STRAIN SR-11) 693– PRECURSOR 730 PVGLP_BEV NONSTRUCTURAL BOVINEEPHEMERAL FEVER 377– 513– GLYCOPROTEIN VIRUS 414 569 GNS PRECURSOPVGLX_PRVR1 PEPLOMER BERNE VIRUS  43–  90– 622– 1128–  GLYCOPROTEIN 82124 656 1236 PRECURSOR PVGLY_JUN1N SECRETED PSEUDORABIES VIRUS (STRAIN420– GLYCOPROTEIN OX RICE) 461 PVGLY_LASSG GLYCOPROTEIN JUNIN ARENAVIRUS 301– POLYPROTEIN 349 PRECURSOR PVGLY_LASS1 GLYCOPROTEIN LASSAVIRUS (STRAIN GA391) 317– 388– POLYPROTEIN 360 422 PRECURSOR PVGLY_LYCVAGLYCOPROTEIN LASSA VIRUS (STRAIN JOSIAH) 318– 389– POLYPROTEIN 361 423PRECURSOR PVGLY_LYCVW GLYCOPROTEIN LYMPHOCYTIC 333– 395– POLYPROTEINCHORIOMENINGITIS VIRUS 367 432 PRECURSOR (STRAIN ARMSTRON PVGLY_MOPE1GLYCOPROTEIN LYMPHOCYTIC 124– 333– 395– POLYPROTEIN CHORIOMENINGITISVIRUS 158 367 432 PRECURSOR (STRAIN WE) PVGLY_P1ARV GLYCOPROTEIN MOPEIAVIRUS 316– POLYPROTEIN 359 PRECURSOR PVGLY_TACV GLYCOPROTEIN PICHINDEARENA VIRUS 334– POLYPROTEIN 375 PRECURSOR PVGLY_TACV5 GLYCOPROTEINTACARIBE VIRUS 315– POLYPROTEIN 363 PRECURSOR PVGLY_TACV7 GLYCOPROTEINTACARIBE VIRUS (STRAIN V5) 303– 382– POLYPROTEIN 351 416 PRECURSORPVGLY_TACVT GLYCOPROTEIN TACARIBE VIRUS (STRAIN V7) 302– 381–POLYPROTEIN 350 415 PRECURSOR PVGNB_CPMV GLYCOPROTEIN TACARIBE VIRUS(STRAIN 303– 382– POLYPROTEIN TRVL 11598) 351 416 PRECURSOR PVGNM_CPMVGENOME COWPEA MOSAIC VIRUS 835– POLYPROTEIN M 869 PVGNM_CPSMV GENOMECOWPEA MOSAIC VIRUS 160– POLYPROTEIN M 201 PVGNM_RCMV GENOME COWPEASEVERE MOSAIC VIRUS 192– 758– 874– POLYPROTEIN M (STRAIN DG) 226 792 915PVGP8_EBV GENOME RED CLOVER MOTTLE VIRUS 837– 912– POLYPROTEIN M 871 946PVGP_EBOV PROBABLE EPSTEIN-BARR VIRUS  94– MEMBRANE (STRAIN B95-8) 149ANTIGEN GP85 PVGP_MABVM STRUCTURAL EBOLA VIRUS 280– 334– 469–GLYCOPROTEIN 321 368 503 PRECURSOR PVGP_MABVP STRUCTURAL MARBURG VIRUS(STRAIN 562– GLYCOPROTEIN MUSOKE) 596 PRECURSOR PVH02_VACCC STRUCTURALMARBURG VIRUS (STRAIN POPP) 562– GLYCOPROTEIN 596 PRECURSOR PVH02_VACCVLATE VACCINIA VIRUS (STRAIN  58– PROTEIN H2 COPENHAGEN) 92 PVH02_VARVLATE VACCINIA VIRUS (STRAIN WR)  58– PROTEIN H2 94 PVH05_VACCC LATEVARIOLA VIRUS  58– PROTEIN H2 92 PVH05_VACCV PROTEIN H5 VACCINIA VIRUS(STRAIN 118– COPENHAGEN) 185 PVH05_VARV PROTEIN H5 VACCINIA VIRUS(STRAIN WR) 118– 185 PVHEL_LSV PROTEIN H5 VARIOLA VIRUS 136– 203PVHRP_VACCC PROBABLE LILY SYMPTOMLESS VIRUS 126– HELICASE 160PVHRP_VACCV HOST RANGE VACCINIA VIRUS (STRAIN 216– PROTEIN COPENHAGEN)279 PV103_VACCC HOST RANGE VACCINIA VIRUS (STRAIN WR) 216– PROTEIN 279PV103_VACCV PROTEIN 13 VACCINIA VIRUS (STRAIN 150– 210– COPENHAGEN) 193244 PV103_VARV PROTEIN 13 VACCINIA VIRUS (STRAIN WR) 150– 210– 193 244PV106_VACCV PROTEIN 13 VARIOLA VIRUS 150– 210– 193 244 PV106_VARVPROTEIN 16 VACCINIA VIRUS (STRAIN WR)  58– 92 PV107_VARV PROTEIN 16VARIOLA VIRUS  58– 92 PV108_VACCC PROTEIN 17 VARIOLA VIRUS 373– 407PV108_VACCV PUTATIVE RNA VACCINIA VIRUS (STRAIN 548– HELICASE 18COPENHAGEN) 589 PV108_VARV PUTATIVE RNA VACCINIA VIRUS (STRAIN WR) 548–HELICASE 18 589 PV1E1_HCMVA PUTATIVE RNA VARIOLA VIRUS 548– HELICASE 18589 PV1E1_HCMVT 55 KD HUMAN CYTOMEGALOVIRUS  78– 171– 368– 416–IMMEDIATE- (STRAIN AD169) 112 205 402 450 EARLY PROTEIN 1 PV1E1_MCMVS 55KD HUMAN CYTOMEGALOVIRUS  78– 171– 368– 416– IMMEDIATE- (STRAIN TOWNE)112 205 402 450 EARLY PROTEIN 1 PV1E2_NPVOP IMMEDIATE- MURINECYTOMEGALOVIRUS 244– EARLY (STRAIN SMITH) 297 PROTEIN 1 PV1EN_NPVACIMMEDIATE- ORGYIA PSEUDOTSUGATA  94– 305– EARLY MULTICAPSID POLYHEDROSISVIRUS 128 395 PROTEIN 1E-2 PV1F_CAEVC IMMEDIATE AUTOGRAPHA CALIFORNICA277– EARLY NUCLEAR POLYHEDROSIS VIRUS 407 REGULATORY PROTEIN 1E-NPV1F_F1VPE VIRION CAPRINE ARTHRITIS ENCEPHALITIS  23– INFECTIVITY VIRUS(STRAIN CORK) 92 FACTOR PV1F_F1VSD VIRION FELINE IMMUNODEFICIENCY VIRUS 53– INFECTIVITY (ISOLATE PETALUMA) 94 FACTOR PV1F_HV1A2 VIRION FELINEIMMUNODEFICIENCY VIRUS  32– INFECTIVITY (ISOLATE SAN DIEGO) 80 FACTORPV1F_HV1B1 VIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE1 (ARV2/SF2 ISOLATE 42 96 FACTOR PV1F_HV1B5 VIRION HUMANIMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE I (BH10, BRU, HXB2, PV42 96 FACTOR PV1F_HV1EL VIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62–INFECTIVITY TYPE 1 (BH5 ISOLATE) 42 96 FACTOR PV1F_HV1JR VIRION HUMANIMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE 1 (ELI ISOLATE) 42 96FACTOR PV1F_HV1MA VIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62–INFECTIVITY TYPE 1 (JRCSF ISOLATE) 42 96 FACTOR PV1F_HV1MN VIRION HUMANIMMUNODEFICIENCY VIRUS  2– INFECTIVITY TYPE 1 (MAL ISOLATE) 36 FACTORPV1F_HV1N5 VIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE1 (MN ISOLATE) 42 96 FACTOR PV1F_HV1NA VIRION HUMAN IMMUNODEFICIENCYVIRUS  1–  62– INFECTIVITY TYPE 1 (NEW YORK-5 ISOL 42 96 FACTORPV1F_HV1ND VIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE1 (ISOLATE N1T-A) 42 96 FACTOR PV1F_HV1OY VIRION HUMAN IMMUNODEFICIENCYVIRUS  1–  62– INFECTIVITY TYPE 1 (NDK ISOLATE) 42 96 FACTOR PV1F_HV1RHVIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE 1 (OY1ISOLATE) 42 96 FACTOR PV1F_HV1U4 VIRION HUMAN IMMUNODEFICIENCY VIRUS  1– 62– INFECTIVITY TYPE 1 (RF/HAT ISOLATE) 42 96 FACTOR PV1F_HV1Z2 VIRIONHUMAN IMMUNODEFICIENCY VIRUS  1– INFECTIVITY TYPE 1 (STRAIN UGANDAN 42FACTOR PV1F_HV1Z6 VIRION HUMAN IMMUNODEFICIENCY VIRUS  1–  62–INFECTIVITY TYPE 1 (Z2/CDC-Z34 ISOLAT 42 96 FACTOR PV1F_HV2D2 VIRIONHUMAN IMMUNODEFICIENCY VIRUS  1–  62– INFECTIVITY TYPE 1 (ZAIRE 6ISOLATE) 42 96 FACTOR PV1F_HV2NZ VIRION HUMAN IMMUNODEFICIENCY VIRUS147– INFECTIVITY TYPE 2 (ISOLATE D205.7) 195 FACTOR PV1F_HV2RO VIRIONHUMAN IMMUNODEFICIENCY VIRUS 152– INFECTIVITY TYPE 2 (ISOLATE N1H-Z) 193FACTOR PV1F_OMVVS VIRION HUMAN IMMUNODEFICIENCY 163– INFECTIVITY VIRUSTYPE 2 (ISOLATE ROD) 197 FACTOR PV1F_S1VA1 VIRION OVINE LENTIVIRUS(STRAIN  44– INFECTIVITY SA-OMVV) 114 FACTOR PV1F_S1VAG VIRION SIMIANIMMUNODEFICIENCY  2– 150– INFECTIVITY VIRUS (AGM155 ISOLATE) 58 202FACTOR PV1F_S1VA1 VIRION SIMIAN IMMUNODEFICIENCY  17– INFECTIVITY VIRUS(AGM3 ISOLATE) 58 FACTOR PV1F_S1VAT VIRION SIMIAN IMMUNODEFICIENCY  2–143– INFECTIVITY VIRUS (ISOLATE AGM / CLONE GR 36 187 FACTOR PV1F_S1VCZVIRION SIMIAN IMMUNODEFICIENCY  20– 150– INFECTIVITY VIRUS (TYO-1ISOLATE) 58 195 FACTOR PV1F_S1VGB VIRION CHIMPANZEE IMMUNODEFICIENCY  1–INFECTIVITY VIRUS 42 FACTOR PV1MP_HSV11 VIRION SIMIAN IMMUNODEFICIENCY 1– INFECTIVITY VIRUS (ISOLATE GB1) 39 FACTOR PV1MP_HSVEB PROBABLEHERPES SIMPLEX VIRUS (TYPE  85– INTEGRAL 1 / STRAIN 17) 134 MEMBRANEPROTEIN PV1MP_HSVSA PROBABLE EQUINE HERPESVIRUS TYPE 1 148– 335–INTEGRAL (STRAIN AB4P) 182 369 MEMBRANE PROTEIN PV1MP_VZVD INTEGRALHERPESVIRUS SAIMIRI  80– MEMBRANE (STRAIN 11) 129 PROTEIN PV1NT_SSV1PROBABLE VARICELLA-ZOSTER VIRUS 107– 155– 267– INTEGRAL (STRAIN DUMAS)151 189 301 MEMBRANE PROTEIN PVJ01_VACCC PROBABLE SULFOLOBUS VIRUS-LIKE 85– 138– INTEGRASE PARTICLE SSV1 130 172 PVJ01_VACCV PROTEIN J1VACCINIA VIRUS (STRAIN  22– COPENHAGEN) 56 PVJ01_VARV PROTEIN J1VACCINIA VIRUS (STRAIN WR)  22– 56 PVK03_VACCC PROTEIN J1 VARIOLA VIRUS 22– 56 PVK03_VACCV PROTEIN K3 VACCINIA VIRUS (STRAIN  38– COPENHAGEN)82 PVK07_VACCV PROTEIN K3 VACCINIA VIRUS (STRAIN WR)  38– 82 PVL02_VACCCPROTEIN K7 VACCINIA VIRUS (STRAIN 115– WR), AND (STRAIN COPENHAGEN) 149PVL02_VACCV PROTEIN LI VACCINIA VIRUS (STRAIN  47– COPENHAGEN) 81PVL02_VARV PROTEIN L2 VACCINIA VIRUS (STRAIN WR)  47– 92 PVL1_CRPVKPROTEIN L2 VARIOLA VIRUS  47– 81 PVL1_FPVL PROBABLE L1 COTTONTAIL RABBIT(SHOPE) 261– 331– PROTEIN PAPILLOMA VIRUS (STRAIN KANS 295 383PVL1_HPV05 PROBABLE L1 AVIAN PAPILLOMA VIRUS FPV-L  38– PROTEIN 90PVL1_HPV08 PROBABLE L1 HUMAN PAPILLOMA VIRUS TYPE 5 355– PROTEIN 393PVL1_HPV1A PROBABLE L1 HUMAN PAPILLOMA VIRUS TYPE 8 354– PROTEIN 392PVL1_HPV47 PROBABLE L1 HUMAN PAPILLOMA VIRUS TYPE 1A 345– PROTEIN 379PVL1_PAPVD PROBABLE L1 HUMAN PAPILLOMA VIRUS TYPE 47 353– PROTEIN 391PVL1_REOVD PROBABLE L1 DEER PAPILLOMA VIRUS  23– PROTEIN 57 PVL2_HPV05MAJOR CORE REOVIRUS (TYPE 3 / STRAIN  94– 437– PROTEIN DEARING) 142 471LAMBDA 1 PVL2_HPV08 PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 341– PROTEIN375 PVL2_HPV16 PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 8 354– PROTEIN 392PVL2_HPV1A PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 16 295– PROTEIN 333PVL2_HPV31 PROBABLE L1 HUMAN PAPILLOMA VIRUS TYPE 1A 345– PROTEIN 379PVL2_HPV35 PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 31 288– PROTEIN 326PVL2_HPV47 PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 35 292– PROTEIN 333PVL2_HPV58 PROBABLE L1 HUMAN PAPILLOMA VIRUS TYPE 47 341– PROTEIN 375PVL2_HPV5B PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 58 293– PROTEIN 327PVL3_REOVD PROBABLE L2 HUMAN PAPILLOMA VIRUS TYPE 5B 341– PROTEIN 375PVL3_REOV1 MINOR CORE REOVIRUS (TYPE 3 / STRAIN 107– 1112–  PROTEINDEARING) 148 1178 LAMBDA 3 PVL3_REOVL MINOR CORE REOVIRUS (TYPE 2 /STRAIN 1112–  PROTEIN LAMBDA 3 D5/JONES) 1178 PVL96_IRV1 MINOR COREREOVIRUS (TYPE 1 / STRAIN 107– 331– 1112–  PROTEIN LANG) 148 365 1178LAMBDA 3 PVM01_VACCC L96 TIPULA IRIDESCENT VIRUS 146– 198– PROTEIN 180236 PVM1_REOVL PROTEIN M1 VACCINIA VIRUS (STRAIN  5– COPENHAGEN) 56PVM21_REOVD MINOR REOVIRUS (TYPE 1 / STRAIN 287– VIRION LANG) 321STRUCTURAL PROTEIN MU-2 PVM22_REOVD MAJOR REOVIRUS (TYPE 3 / STRAIN 416–619– VIRION DEARING) 450 663 STRUCTURAL PROTEIN MU-1/MU-1C PVM2_REOV1MAJOR REOVIRUS (TYPE 3 / STRAIN 416– 618– VIRION DEARING) 450 662STRUCTURAL PROTEIN MU-1/MU-1C PVM2_REOVL MAJOR REOVIRUS (TYPE 2 / STRAIN416– 618– VIRION D5/JONES) 450 662 STRUCTURAL PROTEIN MU-1/MU-1CPVM3_REOVD MAJOR REOVIRUS (TYPE 1 / STRAIN 416– 618– VIRION LANG) 450662 STRUCTURAL PROTEIN MU-1/MU-1C PVMA2_BRSVA MAJOR REOVIRUS (TYPE 3 /STRAIN 135– 337– 523– 618– NONSTRUCTURAL DEARING) 190 371 558 690PROTEIN MU-NS PVMA2_HRSVA MATRIX BOVINE RESPIRATORY SYNCYTIAL  42–GLYCOPROTEIN M2 VIRUS (STRAIN A51908) 90 PVMA2_TRTV MATRIX HUMANRESPIRATORY SYNCYTIAL  42– GLYCOPROTEIN M2 VIRUS (STRAIN A2) 90PVMAT_CDVO MATRIX TURKEY RHINOTRACHEITIS VIRUS  36– GLYCOPROTEIN M2 70PVMAT_INCJJ MATRIX CANINE DISTEMPER VIRUS 193– PROTEIN (STRAINONDERSTEPOORT) 234 PVMAT_NDVA MATRIX (M) INFLUENZA C VIRUS (STRAIN  73–151– PROTEIN C/JJ/50) 114 208 PVMAT_NDVB MATRIX NEWCASTLE DISEASE VIRUS310– PROTEIN (STRAIN AUSTRALIA-VICTORIA/32) 358 PVMAT_P13B MATRIXNEWCASTLE DISEASE VIRUS 324– PROTEIN (STRAIN BEAUDETTE CMS) 358PVMAT_P13H4 MATRIX BOVINE PARAINFLUENZA J VIRUS  99– 204– PROTEIN 133252 PVMAT_RABVA MATRIX HUMAN PARAINFLUENZA J VIRUS  99– 204– PROTEIN(STRAIN NIH 47885) 133 252 PVMAT_RABVC MATRIX RABIES VIRUS (STRAIN AVO1) 69– PROTEIN 103 PVMAT_RABVE MATRIX RABIES VIRUS (STRAIN CV5-11)  69–PROTEIN 103 PVMAT_RABVN MATRIX RABIES VIRUS (STRAIN ERA)  69– PROTEIN103 PVMAT_RABVP MATRIX RABIES VIRUS (STRAIN  69– PROTEIN NISHIGAHARARCEH) 103 PVMAT_RABVS MATRIX RABIES VIRUS (STRAIN PV)  69– PROTEIN 103PVMAT_SYNV MATRIX RABIES VIRUS (STRAIN SAD B19)  69– PROTEIN 103PVMAT_VSV1G MATRIX SONCHUS YELLOW NET VIRUS 246– PROTEIN 280 PVME1_CVBMMATRIX VESICULAR STOMATITIS VIRUS 198– PROTEIN (SEROTYPE INDIANA /STRAIN ( 232 PVME1_CVPFS E1 GLYCOPROTEIN BOVINE CORONA VIRUS (STRAINMEBUS) 175– 209 PVME1_CVPPU E1 GLYCOPROTEIN PORCINE TRANSMISSIBLE  98–212– PRECURSOR GASTROENTERITIS CORONA 146 257 VIRUS (5 PVME1_CVPRM E1GLYCOPROTEIN PORCINE TRANSMISSIBLE 212– PRECURSOR GASTROENTERITIS CORONA257 VIRUS (S PVME1_CVTKE E1 GLYCOPROTEIN PORCINE RESPIRATORY CORONA 212–PRECURSOR VIRUS (STRAIN RM4) 257 PVME1_F1PV E1 GLYCOPROTEIN TURKEYENTERIC CORONA VIRUS  28– 175– 62 209 PVME1_IBV6 E1 GLYCOPROTEIN FELINEINFECTIOUS PERITONITIS 212– PRECURSOR VIRUS (STRAIN 79-1146) 257PVME1_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS  21– 177– VIRUS(STRAIN 6/82) 55 218 PVME1_IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS  21– 177– VIRUS (STRAIN BEAUDETTE) 55 218 PVME1_IBVX E1GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS  21– 177– VIRUS (STRAINBEAUDETTE M- 55 218 PVMEM_EBV E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS 177– VIRUS (STRAIN KB8523) 218 PVMP_CAMVC PROBABLEEPSTEIN-BARR VIRUS (STRAIN  36– MEMBRANE B95-8) 94 PROTEIN PVMP_CAMVDMOVEMENT CAULIFLOWER MOSAIC VIRUS 187– 270– PROTEIN (STRAIN CM-1841) 254324 PVMP_CAMVE MOVEMENT CAULIFLOWER MOSAIC VIRUS 187– 270– PROTEIN(STRAIN D/H) 254 324 PVMP_CAMVN MOVEMENT CAULIFLOWER MOSAIC VIRUS 187–270– PROTEIN (STRAIN BBC) 254 324 PVMP_CAMVS MOVEMENT CAULIFLOWER MOSAICVIRUS 187– 270– PROTEIN (STRAIN NY8153) 254 324 PVMP_CAMVW MOVEMENTCAULIFLOWER MOSAIC VIRUS 187– 270– PROTEIN (STRAIN STRASBOURG) 254 324PVMP_CERV MOVEMENT CAULIFLOWER MOSAIC VIRUS 187– 270– PROTEIN (STRAINW260) 254 324 PVMP_FMVD MOVEMENT CARNATION ETCHED RING VIRUS 212–PROTEIN 246 PVMP_SOCMV MOVEMENT FIGWORT MOSAIC VIRUS 217– PROTEIN(STRAIN DXS) 251 PVMSA_HPBDB MOVEMENT SOYBEAN CHLOROTIC MOTTLE VIRUS 76– PROTEIN 118 PVMSA_HPBDC MAJOR DUCK HEPATITIS B VIRUS 272– 324–SURFACE (BROWN SHANGHAI DUCK ISOLATE S 313 361 ANTIGEN PRECURSORPVMSA_HPBDU MAJOR DUCK HEPATITIS B VIRUS (STRAIN 271– 323– SURFACECHINA) 312 360 ANTIGEN PRECURSOR PVMSA_HPBDW MAJOR DUCK HEPATITIS BVIRUS 234– 289– SURFACE 275 323 ANTIGEN PRECURSOR PVMSA_HPBGS MAJOR DUCKHEPATITIS B VIRUS 272– 324– SURFACE (WHITE SHANGHAI DUCK ISOLATE S3 313361 ANTIGEN PRECURSOR PVMSA_HPBHE MAJOR GROUND SQUIRREL HEPATITIS VIRUS210– SURFACE 244 ANTIGEN PRECURSOR PVMSA_WHV1 MAJOR HERON HEPATITIS BVIRUS 294– SURFACE 328 ANTIGEN PRECURSOR PVMSA_WHV59 MAJOR WOODCHUCKHEPATITIS VIRUS 1 208– SURFACE 242 ANTIGEN PRECURSOR PVMSA_WHV7 MAJORWOODCHUCK HEPATITIS VIRUS 59 213– SURFACE 247 ANTIGEN PRECURSORPVMSA_WHV81 MAJOR WOODCHUCK HEPATITIS VIRUS 7 213– SURFACE 247 ANTIGENPRECURSOR PVMT1_DHV11 PROBABLE WOODCHUCK HEPATITIS VIRUS 8 213– MAJOR(INFECTIOUS CLONE) 247 SURFACE ANTIGEN PRECURSOR PVMT1_IAANN MATRIXDHORI VIRUS (STRAIN 201– PROTEIN 1 INDIANA/1313/61) 235 PVMT1_IABANMATRIX (M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEIN A/ANNARBOR/6/60) 126 222 PVMT1_IACAO MATRIX (M1) INFLUENZA A VIRUS (STRAIN 92– 174– PROTEIN A/BANGKOK/1/79) 126 222 PVMT1_IVFOW MATRIX (M1)INFLUENZA A VIRUS (STRAIN  31– PROTEIN A/CAMEL/MONGOLIA/82) 79PVMT1_IAFPR MATRIX (M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEINA/FORT WARREN/1/50), AND (STR 126 222 PVMT1_IAFPW MATRIX (M1) INFLUENZAA VIRUS (STRAIN  92– 174– PROTEIN A/FOWL PLAGUE VIRUS/ROSTOCK 126 222PVMT1_IALE1 MATRIX (M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEINA/FOWL PLAGUE VIRUS/WEYBRID 126 222 PVMT1_IALE2 MATRIX (M1) INFLUENZA AVIRUS (STRAIN  92– 174– PROTEIN A/LENINGRAD/134/57) 126 222 PVMT1_IAMANMATRIX (M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEINA/LENINGRAD/134/17/57) 126 222 PVMT1_IAPOC MATRIX (M1) INFLUENZA A VIRUS(STRAIN  92– 174– PROTEIN A/MALLARD/NEW YORK/6750/78) 126 222PVMT1_IAPUE MATRIX (M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEINA/PORT CHALMERS/1/73) 126 222 PVMT1_IAUDO MATRIX (M1) INFLUENZA A VIRUS(STRAIN  92– 174– PROTEIN A/PUERTO RICO/8/34) 126 222 PVMT1_IAW1L MATRIX(M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEIN A/UDORN/307/72) 126 222PVMT1_IAZ11 MATRIX (M1) INFLUENZA A VIRUS (STRAIN  92– 174– PROTEINA/WILSON-SMITH/33 126 222 PVMT1_INBAC MATRIX (M1) INFLUENZA A VIRUS(STRAIN  92– 174– PROTEIN A/SWINE/IOWA/15/30 126 222 PVMT1_INBAD MATRIX(M1) INFLUENZA B VIRUS (STRAIN 175– PROTEIN B/ANN ARBOR/1/66(COLD-ADAPTE 209 PVMT1_INBLE MATRIX (M1) INFLUENZA B VIRUS (STRAIN 175–PROTEIN B/ANN ARBOR/1/66 [WILD-TYPE]) 209 PVMT1_INBS1 MATRIX (M1)[INFLUENZA B VIRUS (STRAIN 175– PROTEIN B/LEE/40) 209 PVMT2_INBAC MATRIX(M1) INFLUENZA B VIRUS (STRAIN 175– PROTEIN B/SINGAPORE/222/79) 209PVMT2_INBAD PROBABLE INFLUENZA B VIRUS (STRAIN 132– MATRIX (M2) B/ANNARBOR/1/66 [COLD-ADAPTE 184 PROTEIN PVMT2_INBLE PROBABLE INFLUENZA BVIRUS (STRAIN 132– MATRIX (M2) B/ANN ARBOR/66 [WILD-TYPE]) 184 PROTEINPVMT2_INBS1 PROBABLE INFLUENZA B VIRUS (STRAIN 132– MATRIX (M2)B/LEE/40) 184 PROTEIN PVMT8_MYXVL PROBABLE INFLUENZA B VIRUS (STRAIN132– MATRIX (M2) B/SINGAPORE/222/79) 184 PROTEIN PVN01_VACCC M-T8 MYXOMAVIRUS (STRAIN  46– 145– PROTEIN LAUSANNE) 80 197 PVN01_VACCV PROTEIN N1VACCINIA VIRUS (STRAIN  64– COPENHAGEN) 112 PVN34_ROTBS PROTEIN N1VACCINIA VIRUS (STRAIN WR)  64– 112 PVN34_ROTPC NONSTRUCTURAL BOVINEROTAVIRUS (GROUP C /  64– PROTEIN N534 STRAIN SHINTOKU) 169 PVNCA_AAV2NONSTRUCTURAL PORCINE ROTAVIRUS (GROUP C/  64– 121– PROTEIN N534 STRAINCOWDEN) 117 169 PVNCA_RSV DNA ADENO-ASSOCIATED VIRUS 2  91– 217–REPLICATION 125 251 PROTEIN PVNCN_PAVBO MAJOR RICE STRIPE VIRUS 129–NONCAPSID 163 PROTEIN PVNCS_ADVG PROBABLE BOVINE PARVOVIRUS 221–NONCAPSID 255 PROTEIN NP1 PVNCS_AEDEV NONCAPSID ALEUTIAN MINX DISEASE 19– 270– PROTEIN NS-1 PARVOVIRUS (STRAIN G) 60 304 PVNCS_FPV19NONCAPSID AEDES DENSONUCLEOSIS VIRUS 276– 521– 585– 715–  780– PROTEINNS-1 (STRAIN GKV 002 002) 339 571 640 760 849 PVNCS_MEVA NONCAPSIDFELINE PANLEUKOPENIA VIRUS  53– PROTEIN NS-1 (STRAIN 193) 98 PVNCS_MUM1MNONCAPSID MINK ENTERITIS VIRUS  53– PROTEIN NS-1 (STRAIN ADASHIRI) 98PVNCS_MUM1V NONCAPSID MURINE MINUTE VIRUS (STRAIN MVMI)  35– 261–PROTEIN NS-1 91 297 PVNCS_PAVBO NONCAPSID MURINE MINUTE VIRUS  35– 259–PROTEIN NS-1 87 297 PVNCS_PAVCN PROBABLE BOVINE PARVOVIRUS 181–NONCAPSID 222 PROTEIN NS1 PVNCS_PAVNB NONCAPSID CANINE PARVOVIRUS(STRAIN  53– PROTEIN NS-1 N) 98 PVNCS_PAVNH NONCAPSID HUMAN PARVOVIRUSB19 236– PROTEIN NS-1 270 PVNCS_PAVPN NONCAPSID HAMSTER PARVOVIRUS 111 35– 259– PROTEIN NS-1 76 297 PVNS1_BTV10 NONCAPSID PORCINE PARVOVIRUS(STRAIN  24– 169– 309– PROTEIN NS-1 NADL-2) 77 210 346 PVNS1_BTV17NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE 107– PROTEIN NS1 10 / ISOLATEUSA) 141 PVNS1_BTV1A NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE 107–PROTEIN NS1 17 / ISOLATE USA) 141 PVNS1_BTV1S NONSTRUCTURAL BLUETONGUEVIRUS (SEROTYPE 107– PROTEIN NS1 1 / ISOLATE AUSTRALIA) 141 PVNS1_BTV20NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE 107– PROTEIN NS1 1 / ISOLATESOUTH AFRICA) 141 PVNS1_EHDV2 NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE107– PROTEIN NS1 20 / ISOLATE AUSTRALIA) 141 PVNS1_IAANN NONSTRUCTURALEPIZOOTIC HEMORRHAGIC DISEASE 401– PROTEIN NS1 VIRUS (SEROTYPE 2 / STRA454 PVNS1_IACAO NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/ANN ARBOR/6/60) 83 PVNS1_IACKG NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 37– PROTEIN NS1 A/CAMEL/MONGOLIA/82 71 PVNS1_IACK1 NONSTRUCTURALINFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1 A/CHICKEN/GERMANY/N/49) 83PVNS1_IADA2 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  46– PROTEIN NS1A/CHICKEN/JAPAN/24) 80 PVNS1_IADE1 NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  49– PROTEIN NS1 A/DUCK/ALBERTA/60/76) 83 PVNS1_IADU3NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  46– PROTEIN NS1A/DUCK/ENGLAND/1/56) 80 PVNS1_IAFOM NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  46– PROTEIN NS1 A/DUCK/UKRAINE/1/63) 80 PVNS1_IAFOWNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1 A/FORTMONMOUTH/1/47) 83 PVNS1_IAFPR NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 49– PROTEIN NS1 A/FORT WARREN/1/50), AND (STRA 83 PVNS1_IALE1NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1 A/FOWL PLAGUEVIRUS/ROSTOCK 83 PVNS1_IALEN NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 49– PROTEIN NS1 A/LENINGRAD/134/57) 83 PVNS1_IAMA6 NONSTRUCTURALINFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1 A/LENINGRAD/54/1) 83PVNS1_IAMAN NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/MALLARD/ALBERTA/88/76 83 PVNS1_IAMAO NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  49– PROTEIN NS1 A/MALLARD/NEW YORK/6750/78) 83 PVNS1_IAMYNNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1 A/MALLARD/NEWYORK/6874/78 83 PVNS1_IAP10 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  46–PROTEIN NS1 A/MYNAH/HANEDA-THAI/76) 80 PVNS1_IAP11 NONSTRUCTURALINFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1 A/PINTAIL/ALBERTA/119/79 83PVNS1_IAP12 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/PINTAIL/ALBERTA/121/79) 83 PVNS1_IAP13 NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  49– PROTEIN NS1 A/PINTAIL/ALBERTA/268/78 83 PVNS1_IAPUENONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/PINTAIL/ALBERTA/358/79) 83 PVNS1_IATKB NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  49– PROTEIN NS1 A/PUERTO RICO/8/34) 83 PVNS1_IATKCNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/TURKEY/BETHLEHEM-GLILIT/14 83 PVNS1_IATKR NONSTRUCTURAL INFLUENZA AVIRUS (STRAIN  49– PROTEIN NS1 A/TURKEY/CANADA/63) 83 PVNS1_IATRSNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/TURKEY/OREGON/71) 83 PVNS1_IATRT NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  46– PROTEIN NS1 A/TERN/SOUTH AFRICA/61 80 PVNS1_IAZ11NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  49– PROTEIN NS1A/TERN/TURKMENIA/18/72) 83 PVNS1_INBAC NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  49– PROTEIN NS1 A/SWINE/IOWA/15/30) 83 PVNS1_INBGANONSTRUCTURAL INFLUENZA B VIRUS (STRAIN 143– PROTEIN NS1 B/ANNARBOR/1/66 [COLD-ADAPTE 177 PVNS1_INBHK NONSTRUCTURAL INFLUENZA B VIRUS(STRAIN 143– PROTEIN NS1 B/GA/B6) 177 PVNS1_INBHT NONSTRUCTURALINFLUENZA B VIRUS (STRAIN 143– PROTEIN NS1 B/HONG KONG/8/73), AND(STRAIN 177 PVNS1_INB1D NONSTRUCTURAL INFLUENZA B VIRUS (STRAIN 143–PROTEIN NS1 B/HT/84) 177 PVNS1_INBLE NONSTRUCTURAL INFLUENZA B VIRUS(STRAIN 143– PROTEIN NS1 B/1D/86) 177 PVNS1_INBMD NONSTRUCTURALINFLUENZA B VIRUS (STRAIN 143– PROTEIN NS1 B/LEE/40) 177 PVNS1_INBPANONSTRUCTURAL INFLUENZA B VIRUS (STRAIN 143– PROTEIN NS1 B/MARYLAND/59)177 PVNS1_INBRU NONSTRUCTURAL INFLUENZA B VIRUS (STRAIN 143– 277–PROTEIN NS1 B/PA/79) 177 337 PVNS1_INBS1 NONSTRUCTURAL INFLUENZA B VIRUS(STRAIN 139– PROTEIN NS1 B/RU/69) 173 PVNS1_INBS1 NONSTRUCTURALINFLUENZA B VIRUS (STRAIN 143– PROTEIN NS1 B/SINGAPORE/222/79) 177PVNS1_INBVJ NONSTRUCTURAL INFLUENZA B VIRUS (STRAIN 143– PROTEIN NS1B/SINGAPORE/64) 177 PVNS1_INBYA NONSTRUCTURAL INFLUENZA B VIRUS (STRAIN143– PROTEIN NS1 B/VICTORIA/87) 177 PVNS2_AHSV9 NONSTRUCTURAL INFLUENZAB VIRUS (STRAIN 143– PROTEIN NS1 B/YAMAGATA/1/73) 177 PVNS2_BTV17NONSTRUCTURAL AFRICAN HORSE SICKNESS VIRUS (SEROTYPE 9)  67– PROTEIN NS2101 PVNS2_BTV1X NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE 17 / ISOLATEUSA) 203– PROTEIN NS2 237 PVNS2_CVMJH NONSTRUCTURAL BLUETONGUE VIRUS(SEROTYPE 10) 203– PROTEIN NS2 237 PVNS2_EHDV2 NONSTRUCTURAL MURINECORONA VIRUS MHV  71– PROTEIN NS2 (STRAIN JHM) 105 PVNS2_IAALANONSTRUCTURAL EPIZOOTIC HEMORRHAGIC 206– 276– PROTEIN NS2 DISEASE VIRUS(SEROTYPE 2 / STRAI 272 311 PVNS2_IAANA NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  14– PROTEIN NS2 A/ALASKA/6/77), AND (STRAIN A/U 93 PVNS2_IAANNNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/ANAS ACUTA/PRIMORIE/695/76) 93 PVNS2_IACH1 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 14– PROTEIN NS2 A/ANN ARBOR/6/60), AND (STRAIN 93 PVNS2_IACKGNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/CHILE/1/83)93 PVNS2_IACK1 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2A/CHICKEN/GERMANY/N/49) 79 PVNS2_IADA2 NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  11– PROTEIN NS2 A/CHICKEN/JAPAN/24) 90 PVNS2_IADE1NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2A/DUCK/ALBERTA/60/76) 79 PVNS2_IADU3 NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  11– PROTEIN NS2 A/DUCK/ENGLAND/1/56) 90 PVNS2_IAFOMNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  11– PROTEIN NS2A/DUCK/UKRAINE/L/63) 90 PVNS2_IAFOW NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  14– PROTEIN NS2 A/FORT MONMOUTH/1/47) 93 PVNS2_IAFPRNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/FORTWARREN/1/50) 93 PVNS2_IALE2 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14–PROTEIN NS2 A/FOWL PLAGUE VIRUS/ROSTOCK 93 PVNS2_IALEN NONSTRUCTURALINFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/LENINGRAD/134/17/57) 93PVNS2_IAMA6 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2A/LENINGRAD/54/1) 93 PVNS2_IAMA8 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 14– PROTEIN NS2 A/MALLARD/ALBERTA/88/76) 79 PVNS2_IAMAN NONSTRUCTURALINFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/MALLARD/ALBERTA/827/78) 79PVNS2_IAMAO NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2A/MALLARD/NEW YORK/6750/78) 93 PVNS2_IAMYN NONSTRUCTURAL INFLUENZA AVIRUS (STRAIN  14– PROTEIN NS2 A/MALLARD/NEW YORK/6874/78) 93PVNS2_IAP10 NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  11– PROTEIN NS2A/MYNAH/HANEDA-THAI/76) 90 PVNS2_IAP11 NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  14– PROTEIN NS2 A/PINTAIL/ALBERTA/119/79) 93 PVNS2_IAP12NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2A/PINTAIL/ALBERTA/121/79) 79 PVNS2_IAPUE NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  14– PROTEIN NS2 A/PINTAIL/ALBERTA/268/78) 93 PVNS2_IATKBNONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/PUERTORICO/8/34) 93 PVNS2_IATKR NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  14–PROTEIN NS2 A/TURKEY/BETHLEHEM-GLILIT/14 79 PVNS2_IATRS NONSTRUCTURALINFLUENZA A VIRUS (STRAIN  14– PROTEIN NS2 A/TURKEY/OREGON/71 79PVNS2_IAUSS NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN  11– PROTEIN NS2A/TERN/SOUTH AFRICA/61) 52 PVNS2_INBLE NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN  14– PROTEIN NS2 A/USSR/90/77) 93 PVNS2_INBYA NONSTRUCTURALINFLUENZA B VIRUS (STRAIN  2–  59– PROTEIN NS2 B/LEE/40 43 119PVNS2_INCJJ NONSTRUCTURAL INFLUENZA B VIRUS (STRAIN  2–  59– PROTEIN NS2B/YAMAGATA/1/73) 43 119 PVNS2_PVM NONSTRUCTURAL INFLUENZA C VIRUS(STRAIN  57– PROTEIN NS2 C/JJ/50) 98 PVNS3_AHSV3 NONSTRUCTURAL PNEUMONIAVIRUS OF MICE  70– PROTEIN 2 104 PVNS3_AHSV9 NONSTRUCTURAL AFRICAN HORSESICKNESS  44– 166– PROTEIN NS3 VIRUS (SEROTYPE 3) 78 215 PVNS3_BRDNONSTRUCTURAL AFRICAN HORSE SICKNESS  37–  88– 166– PROTEIN NS3 VIRUS(SEROTYPE 9) 78 122 215 PVNS3_CVPFS NONSTRUCTURAL BROADHAVEN VIRUS  26–102– PROTEIN NS3 98 147 PVNS4_CVH22 NONSTRUCTURAL PORCINE TRANSMISSIBLE 13– PROTEIN 3-1 GASTROENTERITIS CORONA VIRUS (S 51 PVNS4_RSVNONSTRUCTURAL HUMAN CORONA VIRUS (STRAIN  11– PROTEIN 4 229E) 52PVNS7_CVCAE NONSTRUCTURAL RICE STRIPE VIRUS  2– PROTEIN NS4 40PVNS7_CVFE3 NONSTRUCTURAL CANINE ENTERIC CORONA VIRUS  11– PROTEIN 7(STRAIN K378) 47 PVNS7_F1PV NONSTRUCTURAL FELINE ENTERIC CORONA VIRUS 1– PROTEIN 7 (STRAIN 79-1683) 42 PVNSC_CDVO NONSTRUCTURAL FELINEINFECTIOUS PERITONITIS  1– PROTEIN 7 VIRUS (STRAIN 79-1146) 42PVNSC_MEASE NONSTRUCTURAL CANINE DISTEMPER VIRUS  50–  95– PROTEIN C(STRAIN ONDERSTEPOORT) 84 152 PVNSC_MEAS1 NONSTRUCTURAL MEASLES VIRUS(STRAIN  43– PROTEIN C EDMONSTON) 84 PVNSC_MEASY NONSTRUCTURAL MEASLESVIRUS (STRAIN 1P-3-CA)  43– PROTEIN C 84 PVNSC_P11HB NONSTRUCTURALMEASLES VIRUS (STRAIN  43– PROTEIN C YAMAGATA-1) 84 PVNSC_P11HCNONSTRUCTURAL HUMAN PARAINFLUENZA 1 VIRUS 133– PROTEIN C (STRAIN C35)167 PVNSC_P11HD NONSTRUCTURAL HUMAN PARAINFLUENZA 1 VIRUS 133– PROTEIN C(STRAIN C39) 167 PVNSC_P11HE NONSTRUCTURAL HUMAN PARAINFLUENZA 1 VIRUS133– PROTEIN C (STRAIN C1-5/73) 167 PVNSC_P13H4 NONSTRUCTURAL HUMANPARAINFLUENZA 1 VIRUS  40– 133– PROTEIN C (STRAIN C1-14/80) 75 167PVNSC_SEND6 NONSTRUCTURAL HUMAN PARAINFLUENZA 3 VIRUS  58– 161– PROTEINC (STRAIN NIH 47885) 133 199 PVNSC_SENDH NONSTRUCTURAL SENDAI VIRUS(STRAIN 6/94) 133– PROTEIN C 167 PVNSC_SENDZ NONSTRUCTURAL SENDAI VIRUS(STRAIN 133– PROTEIN C HARRIS) 167 PVNSM_INSV NONSTRUCTURAL SENDAI VIRUS(STRAIN Z) 133– PROTEIN C 167 PVNST_BUNGE NONSTRUCTURAL IMPATIENSNECROTIC SPOT  44– 262– PROTEIN NS-M VIRUS (INSV) 102 296 PVNST_BUNL7NONSTRUCTURAL BUNYA VIRUS GERMISTON  34– PROTEIN NS-S 75 PVNST_BUNLCNONSTRUCTURAL BUNYA VIRUS LA CROSSE  5– PROTEIN NS-S (ISOLATE L74) 39PVNST_MAGV NONSTRUCTURAL BUNYA VIRUS LA CROSSE  5– PROTEIN NS-S 39PVNST_TOSV NONSTRUCTURAL MAGUARI VIRUS  35– PROTEIN NS-S 69 PVNST_UUKNONSTRUCTURAL TOSCANA VIRUS (TOS) 144– PROTEIN NS-S 183 PVNUA_PRVKANONSTRUCTURAL UUKUNIEMI VIRUS (UUK) 139– PROTEIN NS-S 173 PVNUC_DHV11PROBABLE PSEUDORABIES VIRUS (STRAIN 1134–  NUCLEAR KAPLAN) (PRV) 1175ANTIGEN PVNUC_EBOV NUCLEOPROTEIN DHORI VIRUS (STRAIN 209–INDIAN/1313/61) (DHO) 243 PVNUC_IAANA NUCLEOPROTEIN EBOLA VIRUS 191–227– 329– 225 261 369 PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1–  96– 357– A/ANAS ACUTA /PRIMORIE/695/76) 42 154 408PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357– A/ANNARBOR/6/60) 42 408 PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 1– 357– A/BRAZIL/11/78) 42 408 PVNUC_IACAL NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/BUDGERIGAR/HOKKAIDO/1/77) 42 154 408PVNUC_IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357–A/CALIFORNIA/10/78) 42 409 PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1–  96– 357– A/CHICKEN/GERMANY/N/49) 42 154 408 PVNUC_IADAUNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/CHICKEN/PENNSYLVANIA/1/83) 42 154 408 PVNUC_IADBE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/DUCK/AUSTRALIA/749/80) 42 154408 PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/DUCK/BEIJING/1/78) 42 154 408 PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 360– A/DUCK/CZECHOSLOVAKIA/56) 42 154 408PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/DUCK/ENGLAND/1/56) 42 154 408 PVNUC_IADHK NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/DUCK/ENGLAND/1/62) 42 154 408 PVNUC_IADM2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357– A/DUCK/HONGKONG/7/75) 42 154 408 PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1–  96– 357– A/DUCK/MEMPHIS/928/74 42 154 408 PVNUC_IADNZNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/DUCK/MANITOBA/1/53) 42 154 408 PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/DUCK/NEW ZEALAND/31/76) 42 154 408PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  96– 357–A/DUCK/UKRAINE/2/60) 154 408 PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1– 357– A/ENGLAND/19/55) 42 409 PVNUC_IAFOW NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1– 357– A/FORT MONMOUTH/1/47) 42 409PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 357– A/FORTWARREN/I/SO) 408 PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 96– 357– A/FOWL PLAGUE VIRUS/DOBSON/ 42 154 408 PVNUC_IAGRENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 360– A/FOWL PLAGUEVIRUS/ROSTOCK 42 154 408 PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1– 113– 357– A/GREY TEAL/AUSTRALIA/2/79) 42 154 408 PVNUC_IAGU2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357– A/GULL/MARYLAND/5/77)42 408 PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  96– 357–A/GULL/MARYLAND/704/77) 154 409 PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/GULL/MARYLAND/1824/78) 42 154 409PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/GULL/MARYLAND/1815/79) 42 154 409 PVNUC_IAGUM NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN  1–  96– 357– A/GULL/ASTRAKHAN/227/84) 42 154 409PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/GULL/MASSACHUSETTS/26/80) 42 154 409 PVNUC_IAH1C NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/GULL/MINNESOTA/945/80) 42 154409 PVNUC_IAHJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357–A/HICKOX/40) 42 409 PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 1–  96– 357– A/EQUINE/JILLIN/1/89) 42 154 408 PVNUC_IAHM1 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/EQUINE/LONDON/1416/73) 42 154408 PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96–A/EQUINE/M1AMI/1/63) 42 154 PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1– 357– A/HONG KONG/1/68) 42 409 PVNUC_IAHPR NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1– 357– A/HONG KONG/5/83) 42 409 PVNUC_IAHTENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  96– 357– A/EQUINE/PRAGUE/1/56)154 408 PVNUC_IAK1E NUCLEOPROTEIN INFLUENZA A VIRUS  1–  96– 357– 42 154408 PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357–A/KIEV/59/79) 42 409 PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 1– 357– A/LENINGRAD/54/1) 42 409 PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA AVIRUS  1–  96– 357– 42 154 408 PVNUC_IAM1N NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/MALLARD/NEW YORK/6750/78) 42 154 408PVNUC_IANE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/MINK/SWEDEN/84) 42 154 408 PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1–  96– 357– A/NEW JERSEY/8/76) 42 154 408 PVNUC_IAOH1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357– A/NT/60/68) 42 409PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357–A/OHIO/4/83) 42 409 PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 1–  96– 357– A/PARROT/ULSTER/73) 42 154 408 PVNUC_IARUD NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1– 357– A/PUERTO RICO/8/34) 42 409PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/RUDDY TURNSTONE/NEW JERSE 42 154 408 PVNUC_IASH2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/SEAL/MASSACHUSETTS/1/80) 42154 408 PVNUC_IAS1N NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357–A/SHEARWATER/AUSTRALIA/72) 42 408 PVNUC_IATE1 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1– 357– A/SINGAPORE/1/57) 42 409 PVNUC_IATKNNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/TEAL/ICELAND/29/80) 42 154 408 PVNUC_IATKO NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/TURKEY/MINNESOTA/1661/81) 42 154 408PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/TURKEY/ONTARIO/7732/66) 42 154 408 PVNUC_IATRT NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN  1–  96– 360– A/TERN/SOUTH AFRICA/61) 42 154 408PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/TERN/TURKMENIA/18/72) 42 154 408 PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1– 357– A/TEXAS/1/77) 42 409 PVNUC_IAUSS NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1– 357– A/UDORN/307/72) 42 409 PVNUC_IAV16NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357– A/USSR/90/77) 42 408PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 357–A/VICTORIA/5/68) 408 PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 1–  96– 357– A/WHALE/MAINE/328/84) 42 154 409 PVNUC_IAW1L NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/WHALE/PACIFIC OCEAN/19/76) 42154 408 PVNUC_IAW1S NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357–A/WILSON-SMITH/33) 42 409 PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1–  96– 357– A/WISCONSIN/3523/88) 42 154 408 PVNUC_IAZ41NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357– A/SWINE/29/37) 42154 408 PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96–357– A/SWINE/41/49) 42 154 408 PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1– 357– A/SWINE/CAMBRIDGE/1/35) 42 409 PVNUC_IAZGENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1– 357– A/SWINE/DANDONG/9/83)42 409 PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/GERMANY/2/81) 42 154 408 PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1– 357– A/SWINE/HONG KONG/6/76) 42 409 PVNUC_IAZH4NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357– A/SWINE/HONGKONG/126/82) 42 154 408 PVNUC_IAZ11 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN  1–  96– 357– A/SWINE/HONG KONG/127/82) 42 154 408 PVNUC_IAZ12NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/IOWA/15/30) 42 154 408 PVNUC_IAZ13 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/SWINE/IOWA/1976/31) 42 154 408 PVNUC_IAZJ1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357– A/SWINE/IOWA/46)42 154 408 PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96–357– A/SWINE/ITALY/437/76) 42 154 408 PVNUC_IAZJ3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/SWINE/ITALY/2/79) 42 154 408PVNUC_IA2J4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/ITALY/141/81) 42 154 408 PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/SWINE/ITALY/839/89) 42 154 408 PVNUC_IAZMANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/JAMESBURG/42) 42 154 408 PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/SWINE/MAY/54) 42 154 408 PVNUC_IAZOHNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/NETHERLANDS/12/85) 42 154 408 PVNUC_IAZON NUCLEOPROTEININFLUENZA A VIRUS (STRAIN  1–  96– 357– A/SWINE/OHIO/23/35) 42 154 408PVNUC_IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/ONTARIO/2/81) 42 154 408 PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/SWINE/TENNESSEE/24/77) 42 154 408PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN  1–  96– 357–A/SWINE/WISCONSIN/1/57) 42 154 408 PVNUC_INBAA NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN  1–  96– 357– A/SWINE/WISCONSIN/1/61) 42 154 408PVNUC_INBAC NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN  75– 480– B/ANNA/ARBOR/1/86) 142 514 PVNUC_INBAD NUCLEOPROTEIN INFLUENZA B VIRUS(STRAIN  75– 480– B/ANN ARBOR/1/66 [COLD-ADAPTE 142 514 PVNUC_INBLENUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN  75– 480– B/ANN ARBOR/1/66[WILD-TYPE]) 145 514 PVNUC_INBS1 NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN 75– 480– B/LEE/40) 146 514 PVNUC_INCCA NUCLEOPROTEIN INFLUENZA B VIRUS(STRAIN  75– 480– B/SINGAPORE/222/79) 142 514 PVNUC_MABVM NUCLEOPROTEININFLUENZA C VIRUS (STRAIN  92– 406– C/CALIFORNIA/78) 203 447 PVNUC_MABVPNUCLEOPROTEIN MARBURG VIRUS (STRAIN 173– 322– MUSOKE) 207 407PVO01_VACCC NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 173– 322– 207 407PVO01_VARV PROTEIN O1 VACCINIA VIRUS (STRAIN 102– 245– 341– 581–COPENHAGEN) 145 279 382 615 PVOR1_FXMV PROTEIN O1 VARIOLA VIRUS 102–245– 341– 581– 145 279 382 615 PVOR1_NMV 152 KD FOXTAIL MOSAIC VIRUS293– PROTEIN 327 PVOR1_PMV 186 KD NARCISSUS MOSAIC VIRUS (NMV) 1519– PROTEIN 1575 PVOR1_PVMR 176 KD PAPAYA MOSAIC POTEXVIRUS (PMV) 1– 299–1474–  PROTEIN 39 337 1532 PVOR1_PVX 223 KD POTATO VIRUS M (STRAIN 597–682– PROTEIN RUSSIAN) (PVM) 638 759 PVOR1_PVXCP 165 KD POTATO VIRUS X(PVX) 516– PROTEIN 550 PVOR1_SMYEA 165 KD POTATO VIRUS X (STRAIN CP)(PVX) 510– PROTEIN 547 PVOR1_WCMVM 150 KD STRAWBERRY MILD YELLOW 308–931– PROTEIN EDGE-ASSOCIATED VIRUS (SMYE 342 965 PVOR1_WCMVO 147 KDWHITE CLOVER MOSAIC VIRUS 1240–  PROTEIN (STRAIN M) (WCMV) 1289PVP10_NPVAC 147 KD WHITE CLOVER MOSAIC VIRUS 1240–  PROTEIN (STRAIN O)(WCMV) 1289 PVP10_NPVOP P10 AUTOGRAPHA CALIFORNICA  7– PROTEIN NUCLEARPOLYHEDROSIS VIRUS ( 41 PVP10_RBSDV P10 ORGYIA PSEUDOTSUGATA  7– PROTEINMULTICAPSID POLYHEDROSIS VIRUS 50 PVP10_RGDV PROTEIN S10 RICE BLACKSTREAKED DWARF 339– 395– 506– VIRUS (RBSDV) 382 429 556 PVP10_WTVNONSTRUCTURAL RICE GALL DWARF VIRUS (RGDV) 186– PROTEIN PNS10 273PVP11_RDV NONSTRUCTURAL WOUND TUMOR VIRUS (WTV) 220– PROTEIN PNS10 254PVP11_WTV NONSTRUCTURAL RICE DWARF VIRUS (RDV)  25– 271– PROTEIN PNS1180 314 PVP12_RDV NONSTRUCTURAL WOUND TUMOR VIRUS (WTV)  16– PROTEINPNS11 74 PVP12_WTV NONSTRUCTURAL RICE DWARF VIRUS (RDV)) 140– PROTEINP11 181 PVP18_WTVN1 NONSTRUCTURAL WOUND TUMOR VIRUS (WTV)  68– PROTEINPNS12 108 PVP19_HSVEB NONSTRUCTURAL WOUND TUMOR VIRUS (STRAIN  68–PROTEIN PNS12 N1) (WTV) 108 PVP23_HCMVA CAPSID EQUINE HERPESVIRUS TYPE 1189– ASSEMBLY AND (STRAIN AB4P) (EHV-1) 231 DNA MATUR- ATION PROTEPVP23_HSV6U PROBABLE HUMAN CYTOMEGALOVIRUS  41– 146– CAPSID (STRAINAD169) 82 180 PROTEIN VP23 PVP24_EBOV PROBABLE HERPES SIMPLEX VIRUS(TYPE  47– CAPSID 6 / STRAIN UGANDA-1102) 81 PROTEIN VP23 PVP26_HSVEBMEMBRANE- EBOLA VIRUS 166– ASSOCIATED 200 STRUCTURAL PROTEIN VPVP26_HSVSA CAPSID EQUINE HERPESVIRUS TYPE 1  36– PROTEIN VP26 (STRAINAB4P) (EHV-1) 77 PVP26_NPVOP CAPSID HERPESVIRUS SAIMIRI (STRAIN 11)  41–PROTEIN VP26 78 PVP26_VZVD P26 ORGYIA PSEUDOTSUGATA 118– PROTEINMULTICAPSID POLYHEDROSIS VIRUS 159 PVP2_AHSV4 CAPSID VARICELLA-ZOSTERVIRUS  47– PROTEIN VP26 (STRAIN DUMAS) (VZV) 81 PVP2_BTV10 OUTER AFRICANHORSE SICKNESS VIRUS 136– 270– 410– 614–  684–  976– CAPSID (SEROTYPE 4/ STRAIN VACCI 188 304 465 662 720 1056 PROTEIN VP2 PVP2_BTV11 OUTERBLUETONGUE VIRUS (SEROTYPE 168– CAPSID 10 / ISOLATE USA) 225 PROTEIN VP2PVP2_BTV17 OUTER BLUETONGUE VIRUS (SEROTYPE  77– 559– CAPSID 11 /ISOLATE USA) 111 593 PROTEIN VP2 PVP2_BTV1S OUTER BLUETONGUE VIRUS(SEROTYPE  77– 168– CAPSID 17 / ISOLATE USA) 111 209 PROTEIN VP2PVP2_EHDV1 OUTER BLUETONGUE VIRUS (SEROTYPE 119– 576– 668– CAPSID 1 /ISOLATE SOUTH AFRICA) 153 610 702 PROTEIN VP2 PVP2_ROTBR OUTER EPIZOOTICHEMORRHAGIC  72– 247– 405– 461–  895– CAPSID DISEASE VIRUS (SEROTYPE 1)(EHDV 106 301 45) 495 929 PROTEIN VP2 PVP2_ROTBU RNA-BINDING BOVINE ROTAVIRUS (STRAIN RF)  2– 482– 523– 607–  675– PROTEIN VP2 94 516 557 655754 PVP2_ROTHW RNA-BINDING BOVINE ROTAVIRUS (STRAIN UK)  2– 483– 524–608–  676– PROTEIN VP2 94 517 558 656 755 PVP2_ROTPC RNA-BINDING HUMANROTAVIRUS (SEROTYPE 1  17– 492– 533– 617–  685– PROTEIN VP2 / STRAIN WA)97 526 567 658 764 PVP2_ROTS1 RNA-BINDING PORCINE ROTAVIRUS (GROUP C  1– 52– 194– 515–  599–  705– PROTEIN VP2 / STRAIN COWDEN) 50 99 228 551643 746 PVP30_ASFE7 RNA-BINDING SIMIAN 11 ROTAVIRUS (STRAIN SA11)  36–483– 608– 680– PROTEIN VP2 96 517 656 755 PVP31_FRGJV PHOSPHOPROTEINAFRICAN SWINE FEVER VIRUS  29– P30 (STRAIN E-75)(ASFV) 89 PVP32_ASFB7EARLY 31 KD FROG VIRUS 3 (FV3) 227– PROTEIN 261 PVP35_EBOVPHOSPHOPROTEIN AFRICAN SWINE FEVER VIRUS  29– P32 (STRAIN BA71V) (ASFV)89 PVP35_NPVAC POLYMERASE COMPLEX EBOLA VIRUS  80– PROTEIN VP35 119PVP35_NPVBM EARLY 35 KD AUTOGRAPHA CALIFORNICA  54– PROTEIN NUCLEARPOLYHEDROSIS VIRUS ( 102 PVP35_VACCC EARLY 35 KD BOMBYX MORI NUCLEAR 54– 224– PROTEIN POLYHEDROSIS VIRUS (BMNPV) 102 258 PVP35_VACCPIMMUNODOMINANT VACCINIA VIRUS (STRAIN 140– ENVELOPE COPENHAGEN) 181PROTEIN P35 PVP35_VACCV IMMUNODOMINANT VACCINIA VIRUS (STRAIN L-1VP) 17– ENVELOPE 51 PROTEIN P35 PVP35_VARV IMMUNODOMINANT VACCINIA VIRUS(STRAIN WR) 140– ENVELOPE 181 PROTEIN P35 PVP3_AHSV4 IMMUNODOMINANTVARIOLA VIRUS 141– ENVELOPE 182 PROTEIN P35 PVP3_BTV10 VP3 CORE AFRICANHORSE SICKNESS 173– 240– 667– PROTEIN VIRUS (SEROTYPE 4 / STRAIN 214 274704 VACC1 PVP3_BTV17 VP3 CORE BLUETONGUE VIRUS (SEROTYPE 214– 853–PROTEIN 10 / ISOLATE USA) 255 894 PVP3_BTV1A VP3 CORE BLUETONGUE VIRUS(SEROTYPE 214– 853– PROTEIN 17 / ISOLATE USA) 255 894 PVP3_EHDV1 VP3CORE BLUETONGUE VIRUS (SEROTYPE 214– 853– PROTEIN 1 / ISOLATE AUSTRALIA255 894 PVP3_EHDVA VP3 CORE EPIZOOTIC HEMORRHAGIC 208– 798– 851– PROTEINDISEASE VIRUS (SEROTYPE 1) (EHDV 246 832 892 PVP3_GFLV VP3 COREEPIZOOTIC HEMORRHAGIC 208– 715– 798– 851– PROTEIN DISEASE VIRUS 246 770832 892 PVP3_RDV P3 GRAPEVINE FANLEAF VIRUS  96– PROTEIN (GFLV) 133PVP3_ROTPC MAJOR 114 KD RICE DWARF VIRUS (RDV) 299– 817– STRUCTURAL 337872 PROTEIN PVP3_ROTS1 INNER CORE PORCINE ROTAVIRUS (GROUP C  24– 229–329– 406–  640– PROTEIN VP3 / STRAIN COWDEN) 58 263 395 446 688PVP40_EBV INNER CORE SIMIAN 11 ROTAVIRUS (STRAIN SA11)  26– 244– 331–451–  662– PROTEIN VP3 76 278 365 492 696 PVP40_HSV11 CAPSIDEPSTEIN-BARR VIRUS (STRAIN 433– PROTEIN P40 B95-8) (HUMAN HERPESVIRUS 4)467 PVP40_HSVEB CAPSID HERPES SIMPLEX VIRUS (TYPE 1 206– 599– PROTEINP40 / STRAIN 17) 257 633 PVP40_ILTVT CAPSID EQUINE HERPESVIRUS TYPE 1180– PROTEIN P40 (STRAIN AB4P)(EHV-1) 245 PVP40_SCMVC CAPSID INFECTIOUSLARYNGOTRACHEITIS  1– 509– PROTEIN P40 VIRUS (STRAIN THORNE V88 35 557PVP40_VZVD CAPS ID SIMIAN CYTOMEGALOVIRUS 457– PROTEIN P40 (STRAINCOLBURN) 498 PVP41_NPVAC CAPSID VARICELLA-ZOSTER VIRUS 167– 486– PROTEINP40 (STRAIN DUMAS)(VZV) 246 522 PVP41_ROTS1 STRUCTURAL AUTOGRAPHACALIFORNICA 132– GLYCOPROTEIN NUCLEAR POLYHEDROSIS VIRUS ( 166 GP41PVP42_ROTS1 OUTER SIMIAN 11 ROTAVIRUS (STRAIN SA11)  1– 484– 528– CAPSID35 518 630 PROTEIN VP4 PVP4A_VACCC OUTER SIMIAN 11 ROTAVIRUS (STRAINSA11)  1– 237– 531– CAPSID 35 518 646 PROTEIN VP4 PVP4A_VACCV MAJOR COREVACCINIA VIRUS (STRAIN 355– 718– 794– 857– PROTEIN COPENHAGEN) 359 763828 891 P4A PRECURSOR PVP4A_VARV MAJOR CORE VACCINIA VIRUS (STRAIN WR)262– 355– 718– 794–  857– PROTEIN 296 359 763 828 891 P4A PRECURSORPVP4B_FOWPV MAJOR CORE VARIOLA VIRUS 355– 719– 795– 858– PROTEIN 389 764829 892 P4A PRECURSOR PVP4B_VACCC MAJOR CORE FOWL POX VIRUS 131– 296–PROTEIN 172 330 P4B PRECURSOR PVP4B_VACCV MAJOR CORE VACCINIA VIRUS(STRAIN  3– 125– 249– PROTEIN COPENHAGEN) 37 163 283 P4B PRECURSORPVP4B_VARV MAJOR CORE VACCINIA VIRUS (STRAIN WR)  3– 125– 249– PROTEIN37 163 283 P4B PRECURSOR PVP4_BTV10 MAJOR CORE VARIOLA VIRUS  3– 125–249– PROTEIN 37 163 283 P4B PRECURSOR PVP4_BTV11 VP4 CORE BLUETONGUEVIRUS (SEROTYPE 579– 619– PROTEIN 10 / ISOLATE USA) 617 653 PVP4_BTV13VP4 CORE BLUETONGUE VIRUS (SEROTYPE 569– 609– PROTEIN 11 / ISOLATE USA)607 643 PVP4_BTV2A VP4 CORE BLUETONGUE VIRUS (SEROTYPE 569– 609– PROTEIN13 / ISOLATE USA) 607 643 PVP4_NCDV VP4 CORE BLUETONGUE VIRUS (SEROTYPE2 569– 609– PROTEIN / ISOLATE USA) 607 643 PVP4_RDV OUTER NEBRASKA CALFDIARRHEA VIRUS 484– 528– CAPSID (STRAIN NCDV-LINCOLN) 518 630 PROTEINVP4 PVP4_ROTB4 NONSTRUCTURAL RICE DWARF VIRUS (RDV) 388– 444– 627–PROTEIN PNS4 437 478 679 PVP4_ROTBC OUTER BOVINE ROTAVIRUS (SEROTYPE 6 1– 112– 338– 484–  528– CAPSID / STRAIN B641) 35 146 379 518 653PROTEIN VP4 PVP4_ROTBU OUTER BOVINE ROTAVIRUS (STRAIN C486)  1– 484–528– CAPSID 35 518 630 PROTEIN VP4 PVP4_ROTEH OUTER BOVINE ROTAVIRUS(STRAIN UK)  1– 112– 338– 484–  528– CAPSID 35 146 379 518 653 PROTEINVP4 PVP4_ROTG1 OUTER EQUINE ROTAVIRUS (STRAIN H-2)  1– 112– 227– 345– 484–  528– CAPSID 35 146 274 379 518 653 PROTEIN VP4 PVP4_ROTH1 OUTERROTAVIRUS (GROW B / STRAIN IDIR) 117– 476– CAPSID 151 519 PROTEIN VP4PVP4_ROTH5 OUTER HUMAN ROTAVIRUS (SEROTYPE 1  1– 236– 337– 483–  530–CAPSID / STRAIN 1076) 35 273 378 517 645 PROTEIN VP4 PVP4_ROTH6 OUTERHUMAN ROTAVIRUS (SEROTYPE 2  1– 236– 337– 483–  527– CAPSID / STRAINRV-5) 35 273 378 517 652 PROTEIN VP4 PVP4_ROTHD OUTER HUMAN ROTAVIRUS(SEROTYPE 1  1– 112– 237– 338–  484–  531– CAPSID / STRAIN 69M) 35 146274 379 518 646 PROTEIN VP4 PVP4_ROTH1 OUTER HUMAN ROTAVIRUS (SEROTYPE 2 1– 236– 337– 483–  527– CAPSID / STRAIN DS1) 35 273 378 517 652 PROTEINVP4 PVP4_ROTHK OUTER HUMAN ROTAVIRUS (STRAIN K8)  1– 237– 345– 484– 521– CAPSID 35 274 379 518 588 PROTEIN VP4 PVP4_ROTHL OUTER HUMANROTAVIRUS (STRAIN KU)  1– 337– 483– 527– CAPSID 35 378 517 652 PROTEINVP4 PVP4_ROTHM OUTER HUMAN ROTAVIRUS (STRAIN L26)  1– 236– 337– 483– 527– CAPSID 35 273 378 517 652 PROTEIN VP4 PVP4_ROTHN OUTER HUMANROTAVIRUS (SEROTYPE 1  1– 337– 483– 530– CAPSID / STRAIN M37) 35 378 517645 PROTEIN VP4 PVP4_ROTHP OUTER HUMAN ROTAVIRUS (SEROTYPE 3  1– 237–338– 484–  531– CAPSID / STRAIN MCN13) 35 274 379 518 645 PROTEIN VP4PVP4_ROTHR OUTER HUMAN ROTAVIRUS (SEROTYPE 3  1– 236– 337– 483–  527–CAPSID / STRAIN P) 35 273 378 517 652 PROTEIN VP4 PVP4_ROTHT OUTER HUMANROTAVIRUS (SEROTYPE 3  1–  91– 227– CAPSID / STRAIN RRV) 38 146 274PROTEIN VP4 PVP4_ROTHV OUTER HUMAN ROTAVIRUS (SEROTYPE 4  1– 236– 337–483–  530– CAPSID / STRAIN ST. THOMAS 3) 35 273 378 517 644 PROTEIN VP4PVP4_ROTHW OUTER HUMAN ROTAVIRUS (SEROTYPE 4  1– 237– 344– 483–  527–CAPSID / STRAIN VA70 35 273 378 517 652 PROTEIN VP4 PVP4_ROTP5 OUTERHUMAN ROTAVIRUS (SEROTYPE 1  1– 237– 344– 483–  527– CAPSID / STRAIN WA)35 273 378 517 652 PROTEIN VP4 PVP4_ROTPC OUTER PORCINE ROTAVIRUS(SEROTYPE 112– 484– 528– CAPSID 5 / STRAIN OSU) 146 518 629 PROTEIN VP4PVP4_ROTPG OUTER PORCINE ROTAVIRUS (GROUP C  6– 127– 241– 293–  580–CAPSID / STRAIN COWDEN) 40 161 278 334 614 PROTEIN VP4 PVP4_ROTPY OUTERPORCINE ROTAVIRUS (STRAIN  1– 236– 337– 483–  530–  569– CAPSIDGOTTFRIED) 35 273 378 517 564 638 PROTEIN VP4 PVP4_ROTRH OUTER PORCINEROTAVIRUS (STRAIN YM)  1– 112– 237– 484–  528– CAPSID 35 146 274 518 629PROTEIN VP4 PVP4_ROTSF OUTER RHESUS ROTAVIRUS  1– 112– 237– 338–  484– 531– CAPSID 38 146 274 379 522 646 PROTEIN VP4 PVP4_ROTSS OUTER SIMIAN11 ROTAVIRUS (STRAIN  1– 484– 528– CAPSID SA11-FEM) 35 518 630 PROTEINVP4 PVP4_WTV DE OUTER SIMIAN 11 ROTAVIRUS (STRAIN  1– 237– 345– 484– 531– CAPSID SA11-SEM) 35 274 379 518 646 PROTEIN VP4 PVP5_AHSV4NONSTRUCTURAL WOUND TUMOR VIRUS (WTV)  28– 565– PROTEIN PNS4 62 621PVP5_BRD OUTER AFRICAN HORSE SICKNESS  7– 113– CAPSID VIRUS (SEROTYPE 4/ STRAIN VACC1 58 229 PROTEIN VP5 PVP5_BTV10 OUTER BROADHAVEN VIRUS(BRD)  45–  98– CAPSID 86 226 PROTEIN VP5 PVP5_BTV11 OUTER BLUETONGUEVIRUS (SEROTYPE 10 / ISOLATE USA)  14–  92– 154– 404– CAPSID 58 150 222438 PROTEIN VP5 PVP5_BTV13 OUTER BLUETONGUE VIRUS (SEROTYPE 11 / ISOLATEUSA)  14–  92– 154– 404– CAPSID 58 150 222 445 PROTEIN VP5 PVP5_BTV1AOUTER BLUETONGUE VIRUS (SEROTYPE  14– 154– 404– CAPSID 13 / ISOLATE USA)58 222 438 PROTEIN VP5 PVP5_BTV1S OUTER BLUETONGUE VIRUS (SEROTYPE  14– 92– 148– 404– CAPSID 1 / ISOLATE AUSTRALIA) 58 143 222 438 PROTEIN VP5PVP5_BTV2A OUTER BLUETONGUE VIRUS (SEROTYPE  14–  92– 148– 404– CAPSID 1/ ISOLATE SOUTH AFRICA) 58 143 222 438 PROTEIN VP5 PVP5_EHDV1 OUTERBLUETONGUE VIRUS (SEROTYPE  14–  92– 404– CAPSID 2 / ISOLATE USA) 58 222438 PROTEIN VP5 PVP5_RDV OUTER EPIZOOTIC HEMORRHAGIC  24–  92– 163– 291– 399– CAPSID DISEASE VIRUS (SEROTYPE 1) (EHDV 58 126 233 325 433 PROTEINVP5 PVP5_WTV OUTER COAT RICE DWARF VIRUS (RDV)  38–  95– 550– PROTEIN P586 136 594 PVP61_BTV10 OUTER COAT WOUND TUMOR VIRUS (WTV) 434– 547– 751–PROTEIN P5 503 581 798 PVP61_MRDV VP6 BLUETONGUE VIRUS (SEROTYPE 163–PROTEIN 10 / ISOLATE USA) 215 PVP61_NPVAC PROBABLE MAIZE ROUGH DWARFVIRUS (MRDV) 128– NONSTRUCTURAL 202 41.0 KD PROTEIN PVP62_BTV10 61 KDAUTOGRAPHA CALIFORNICA  29– 351– PROTEIN NUCLEAR POLYHEDROSIS VIRUS ( 96386 PVP64_NPVOP VP6 BLUETONGUE VIRUS (SEROTYPE  47– 159– 214– PROTEIN 10/ ISOLATE USA) 88 207 251 PVP67_NPVAC MAJOR ENVELOPE ORGYIAPSEUDOTSUGATA 296– 431– GLYCOPROTEIN MULTICAPSID POLYHEDROSIS VIRUS 361479 PRECURSOR PVP67_NPVGM MAJOR ENVELOPE AUTOGRAPHA CALIFORNICA  44–289– 443– GLYCOPROTEIN NUCLEAR POLYHEDROSIS VIRUS ( 78 364 477 PRECURSORPVP6_BTV11 MAJOR ENVELOPE GALLERIA MELLONELLA NUCLEAR 206– GLYCOPROTEINPOLYHEDROSIS VIRUS (GMN 281 PVP6_BTV13 VP6 BLUETONGUE VIRUS (SEROTYPE159– PROTEIN 11 / ISOLATE USA) 211 PVP6_BTV17 VP6 BLUETONGUE VIRUS(SEROTYPE 159– PROTEIN 11 / ISOLATE USA) 211 PVP6_BTV1S VP6 BLUETONGUEVIRUS (SEROTYPE  68– 159– PROTEIN 17 / ISOLATE USA) 102 211 PVP6_BTV2AVP6 BLUETONGUE VIRUS (SEROTYPE  12– 163– PROTEIN 1 / ISOLATE SOUTHAFRICA) 78 211 PVP6_RDV VP6 BLUETONGUE VIRUS (SEROTYPE  44– 135– PROTEIN2 / ISOLATE USA) 78 187 PVP6_WTV STRUCTURAL RICE DWARF VIRUS (RDV) 150–296– 360– PROTEIN P6 191 344 401 PVP6_WTVN1 STRUCTURAL WOUND TUMOR VIRUS(WTV) 144– 286– 400– PROTEIN P6 178 334 434 PVP74_NPVAC STRUCTURAL WOUNDTUMOR VIRUS (STRAIN N1) (WTV) 144– 286– PROTEIN P6 178 334 PVP74_NPVCFP74 AUTOGRAPHA CALIFORNICA 387– PROTEIN NUCLEAR POLYHEDROSIS VIRUS 1 456PVP75_HSVSA P74 CHORISTONEURA FUMIFERANA 385– PROTEIN NUCLEARPOLYHEDROSIS VIRU 453 PVP79_NPVAC PROBABLE HERPESVIRUS SAIMIRI (STRAIN11)  50– 163– 931– MEMBRANE 99 211 984 ANTIGEN 75 PVP7_BTV10 79 KDAUTOGRAPHA CALIFORNICA  44– 363– 406– PROTEIN NUCLEAR POLYHEDROSIS VIRUS( 78 397 440 PVP7_BTV10 VP7 CORE BLUETONGUE VIRUS (SEROTYPE 184– PROTEIN10 / ISOLATE USA), (SEROTYPE 228 PVP7_BTV17 VP7 CORE BLUETONGUE VIRUS(SEROTYPE 1) / ISOLATE USA) 201– PROTEIN 235 PVP7_BTV1A VP7 COREBLUETONGUE VIRUS (SEROTYPE 184– PROTEIN 17 / ISOLATE USA) 228 PVP7_BTV15VP7 CORE BLUETONGUE VIRUS (SEROTYPE 184– PROTEIN 1 / ISOLATE AUSTRALIA)235 PVP7_BTV2A VP7 CORE BLUETONGUE VIRUS (SEROTYPE 184– PROTEIN 1 /ISOLATE SOUTH AFRICA) 228 PVP7_EHDV1 VP7 CORE BLUETONGUE VIRUS (SEROTYPE184– PROTEIN 2 / ISOLATE USA) 228 PVP7_RDV VP7 CORE EPIZOOTICHEMORRHAGIC  16– 134– PROTEIN DISEASE VIRUS (SEROTYPE 1) (EHDV 50 178PVP7_WTV NONSTRUCTURAL RICE DWARF VIRUS (RDV)  47– 172– PROTEIN PN57 95255 PVP80_NPVAC NONSTRUCTURAL WOUND TUMOR VIRUS (WTV)  47– 195– 458–PROTEIN PN57 84 243 495 PVP87_NPVOP CAPSID AUTOGRAPHA CALIFORNICA  7– 99– 156– 221– PROTEIN P80 NUCLEAR POLYHEDROSIS VIRUS ( 51 142 204 298PVP8_BTV10 CAPSID ORGYIA PSEUDOTSUGATA  80– 410– PROTEIN P87 MULTICAPSIDPOLYHEDROSIS VIRUS 162 451 PVP8_BTV11 NONSTRUCTURAL BLUETONGUE VIRUS(SEROTYPE  54– 185– PROTEIN P8 10 / ISOLATE USA) 102 219 PVP8_BTV13NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE  54– 185– PROTEIN P8 11 /ISOLATE USA) 102 219 PVP8_BTV17 NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE 54– 185– PROTEIN P8 1) / ISOLATE USA) 102 219 PVP8_BTV1A NONSTRUCTURALBLUETONGUE VIRUS (SEROTYPE  54– 185– PROTEIN P8 17 / ISOLATE USA) 102219 PVP8_BTV1S NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE  54– 185–PROTEIN P8 11 ISOLATE AUSTRALIA) 102 219 PVP8_BTV2A NONSTRUCTURALBLUETONGUE VIRUS (SEROTYPE  54– 185– PROTEIN P8 1 / ISOLATE SOUTHAFRICA) 102 219 PVP8_FOWPV NONSTRUCTURAL BLUETONGUE VIRUS (SEROTYPE  54–185– PROTEIN PS 2 / ISOLATE USA) 102 219 PVP9_RDV STRUCTURAL FOWLPOXVIRUS 193– PROTEIN VP8 245 PRECURSOR PVP9_WTV NONSTRUCTURAL RICE DWARFVIRUS (RDV)  13– 185– PROTEIN PNS9 47 226 PVP9_WTVNJ STRUCTURAL WOUNDTUMOR VIRUS (WTV) 140– PROTEIN P9 212 PVPG_BYDV1 STRUCTURAL WOUND TUMORVIRUS (STRAIN 140– PROTEIN P9 N1) (WTV) 212 PVPHE_NPVAC PUTATIVE BARLEYYELLOW DWARF VIRUS  25– GENOME-LINKED (ISOLATE MAV-PS1) (BYDV) 59PROTEIN PRECURSOR PVPHE_NPVOP 29 KD POLYHEDRAL AUTOGRAPHA CALIFORNICA146– ENVELOPE NUCLEAR POLYHEDROSIS VIRUS ( 223 PROTEIN PVPR_S1VML 32 KDPOLYHEDRAL ORGYIA PSEUDOTSUGATA 131– 206– ENVELOPE MULTICAPSIDPOLYHEDROSIS VIRUS 201 265 PROTEIN PVPU_HV1A2 VPR SIMIANIMMUNODEFICIENCY VIRUS  78– PROTEIN (K78 ISOLATE) (S1V-MAC) 115PVPU_HV1B1 VPU HUMAN IMMUNODEFICIENCY VIRUS  1– PROTEIN TYPE 1 (ARV2/SF2ISOLATE 38 PVPU_HV1B8 VPU HUMAN IMMUNODEFICIENCY VIRUS  4– PROTEIN TYPE1 (BH10 ISOLATE) (III 72 PVPU_HV1BN VPU HUMAN IMMUNODEFICIENCY VIRUS  5–PROTEIN TYPE 1 (BH8 ISOLATE) (HIV 72 PVPU_HV1BR VPU HUMANIMMUNODEFICIENCY VIRUS  4– PROTEIN TYPE 1 (DRAIN ISOLATE) (1 59PVPU_HV1C4 VPU HUMAN IMMUNODEFICIENCY VIRUS  4– PROTEIN TYPE 1 (BRUISOLATE) (HIV 72 PVPU_HV1EL VPU HUMAN IMMUNODEFICIENCY VIRUS  3– PROTEINTYPE 1 (CDC-451 ISOLATE) 40 PVPU_HV1H2 VPU HUMAN IMMUNODEFICIENCY VIRUS 6– PROTEIN TYPE 1 (EL1 ISOLATE) (HIV 40 PVPU_HV113 VPU HUMANIMMUNODEFICIENCY VIRUS  5– PROTEIN TYPE 1 (HXB2 ISOLATE) (HI 72PVPU_HV11R VPU HUMAN IMMUNODEFICIENCY VIRUS  2– PROTEIN TYPE 1 (JHBISOLATE) (HIV 50 PVPU_HV1MA VPU HUMAN IMMUNODEFICIENCY VIRUS  4– PROTEINTYPE 1 (JRCSF ISOLATE) (H 59 PVPU_HV1ND VPU HUMAN IMMUNODEFICIENCY VIRUS 5– PROTEIN TYPE 1 (MAL ISOLATE) (HI 50 PVPU_HV1PV VPU HUMANIMMUNODEFICIENCY VIRUS  4– PROTEIN TYPE 1 (NDK ISOLATE) (HI 40PVPU_HV1RH VPU HUMAN IMMUNODEFICIENCY VIRUS  4– PROTEIN TYPE 1 (PV22ISOLATE) (HI 72 PVPU_HV1S1 VPU HUMAN IMMUNODEFICIENCY VIRUS  1– PROTEINTYPE 1 (RF/HAT ISOLATE) ( 39 PVPU_HV1Z2 VPU HUMAN IMMUNODEFICIENCY VIRUS 4– PROTEIN TYPE 1 (SF162 ISOLATE) (HI 59 PVPU_S1VCZ VPU HUMANIMMUNODEFICIENCY VIRUS  6– PROTEIN TYPE 1 (Z2/CDC-Z34 ISOLAT 40PVTX_HV2D2 VPU CHIMPANZEE IMMUNODEFICIENCY  21– PROTEIN VIRUS (S1V(CPZ))(C1V) 78 PVRNA_BSMV VPX HUMAN IMMUNODEFICIENCY  42– PROTEIN VIRUS TYPE 2(ISOLATE D205, 85 7) (H PVS05_ROTS1 ALPHA-A BARLEY STRIPE MOSAIC VIRUS(BSMV)  40– 857– PROTEIN 74 898 PVS06_ROTBS NONSTRUCTURAL SIMIAN 11ROTAVIRUS (STRAIN SA11) 248– PROTEIN NCVP2 287 PVS06_ROTGA VP6 BOVINEROTAVIRUS (GROUP C /  6– PROTEIN STRAIN SHINTOKU) 44 PVS06_ROTG1 VP6ROTAVIRUS (GROUP B / STRAIN  69– PROTEIN ADRV) (ADULT DIARRHEA ROTA 144PVS06_ROTHC VP6 ROTAVIRUS (GROUP B / STRAIN 1D1R)  24–  64– PROTEIN 58103 PVS06_ROTPC VP6 HUMAN ROTAVIRUS (GROUP C /  9– PROTEIN STRAINBRISTOL) 43 PVS07_ROTB3 VP6 PORCINE ROTAVIRUS (GROUP C  9– PROTEIN /STRAIN COWDEN) 43 PVS07_ROTBU GLYCOPROTEIN BOVINE ROTAVIRUS (STRAINKN-4)  2– 282– VP7 36 320 PVS07_ROTP5 NONSTRUCTURAL BOVINE ROTAVIRUS(STRAIN UK)  88– 199– PROTEIN NCVP3 153 236 PVS07_ROTS1 NONSTRUCTURALPORCINE ROTAVIRUS (SEROTYPE  88– 202– PROTEIN NCVP3 5/ STRAIN OSU) 162236 PVS08_ROTBU NONSTRUCTURAL SIMIAN II ROTA VIRUS  88– 199– PROTEINNCVP3 (STRAIN SA11) 153 236 PVS08_ROTS1 NONSTRUCTURAL BOVINE ROTAVIRUS(STRAIN UK)  2–  75– 160– PROTEIN NS2/VP9 70 119 226 PVS09_ROTB4NONSTRUCTURAL SIMIAN 11 ROTAVIRUS (STRAIN SA11)  2– 144– 217– PROTEINNCVP4 46 212 255 PVS09_ROTB5 GLYCOPROTEIN BOVINE ROTAVIRUS (SEROTYPE  2–282– VP7 6 1 STRAIN B641) 54 320 PVS09_ROTB6 GLYCOPROTEIN BOVINEROTAVIRUS (STRAIN A5)  2– 282– VP7 43 320 PVS09_ROTBA GLYCOPROTEINBOVINE ROTAVIRUS (SEROTYPE  2– 282– VP7 6 / STRAIN 61A) 54 320PVS09_ROTBB GLYCOPROTEIN BOVINE ROTAVIRUS (STRAIN A44)  2– 282– VP7 54320 PVS09_ROTBK GLYCOPROTEIN BOVINE ROTAVIRUS (SEROTYPE  2– 282– VP7 10/ STRAIN B223) 54 320 PVS09_ROTBN GLYCOPROTEIN BOVINE ROTAVIRUS (STRAINKK3)  2– 282– VP7 54 320 PVS09_ROTBT GLYCOPROTEIN BOVINE ROTAVIRUS(STRAIN NCDV)  2– 282– VP7 54 320 PVS09_ROTBU GLYCOPROTEIN BOVINEROTAVIRUS (SEROTYPE  2– 282– VP7 1 / STRAIN T449) 43 320 PVS09_ROTC7GLYCOPROTEIN BOVINE ROTAVIRUS (STRAIN UK)  2– 282– VP7 54 320PVS09_ROTEL GLYCOPROTEIN CHICKEN ROTAVIRUS A 285– VP7 (SEROTYPE 7 /STRAIN C112) 326 PVS09_ROTGA GLYCOPROTEIN EQUINE ROTAVIRUS (STRAIN L338)282– VP7 320 PVS09_ROTG1 GLYCOPROTEIN ROTAVIRUS (GROUP B / STRAIN  43–VP7 ADRV) (ADULT DIARRHEA ROTA 77 PRECURSOR PVS09_ROTH4 GLYCOPROTEINROTAVIRUS (GROUP B / STRAIN IDIR)  45– VP7 79 PRECURSOR PVS09_ROTH9GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 4  2– 282– VP7 / STRAIN RV-4) 43320 PVS09_ROTHA GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE G 282– VP7 /STRAIN RK9) 320 PVS09_ROTHB GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 2282– VP7 / STRAIN HU5) 320 PVS09_ROTHD GLYCOPROTEIN HUMAN ROTAVIRUS(SEROTYPE G  2– 282– VP7 / STRAIN B37) 43 320 PVS09_ROTHH GLYCOPROTEINHUMAN ROTAVIRUS (SEROTYPE 2 282– VP7 / STRAIN DS1) 320 PVS09_ROTHLGLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 2 282– VP7 / STRAIN HN126) 320PVS09_ROTHM GLYCOPROTEIN HUMAN ROTAVIRUS (STRAIN L26)  1– 282– VP7 35320 PVS09_ROTHO GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 11  2– 282– VP7STRAIN M37) 43 320 PVS09_ROTHP GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 1 2– 282– VP7 / STRAIN MO AND STRAIN D) 43 320 PVS09_ROTHR GLYCOPROTEINHUMAN ROTAVIRUS (SEROTYPE 3 282– VP7 / STRAIN P) 320 PVS09_ROTHSGLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 3 282– VP7 / STRAIN RRV) 320PVS09_ROTHT GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 2 282– VP7 / STRAINS2) 320 PVS09_ROTHV GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 4  18– 208–282– VP7 / STRAIN ST. THOMAS 3) 56 242 320 PVS09_ROTHW GLYCOPROTEINHUMAN ROTAVIRUS (SEROTYPE 4  18– 208– 282– VP7 / STRAIN VA70) 56 242 320PVS09_ROTP2 GLYCOPROTEIN HUMAN ROTAVIRUS (SEROTYPE 1  2– 282– VP7 /STRAIN WA) 43 320 PVS09_ROTP3 GLYCOPROTEIN PORCINE ROTAVIRUS (SEROTYPE282– VP7 3 / STRAIN AT/76) 320 PVS09_ROTP4 GLYCOPROTEIN PORCINEROTAVIRUS (SEROTYPE) 282– VP7 / STRAIN CRW-8) 320 PVS09_ROTP5GLYCOPROTEIN PORCINE ROTAVIRUS (SEROTYPE  2– 208– 282– VP7 4 / STRAINOSU) 56 242 320 PVS09_ROTP6 GLYCOPROTEIN PORCINE ROTAVIRUS (SEROTYPE282– VP7 5 / STRAIN OSU) 320 PVS09_ROTPB GLYCOPROTEIN PORCINE ROTAVIRUS(SEROTYPE 282– VP7 5 / STRAIN TFR-41) 320 PVS09_ROTPK GLYCOPROTEINPORCINE ROTAVIRUS (SEROTYPE  18– 208– 282– VP7 4 /STRAIN BEN-144) 56 242320 PVS09_ROTPM GLYCOPROTEIN PORCINE ROTAVIRUS (STRAIN K)  18– 282– VP756 320 PVS09_ROTPY GLYCOPROTEIN PORCINE ROTAVIRUS (SEROTYPE  18– 208–282– VP7 4 / STRAIN BM1-1) 56 242 320 PVS09_ROTRH GLYCOPROTEIN PORCINEROTAVIRUS (STRAIN YM)  1– 282– VP7 35 320 PVS09_ROTS1 GLYCOPROTEINRHESUS ROTAVIRUS 282– VP7 320 PVS10_ROTBN GLYCOPROTEIN SIMIAN 11ROTAVIRUS (STRAIN 282– VP7 SA11) 320 PVS10_ROTBS NONSTRUCTURAL BOVINEROTAVIRUS (STRAIN NCDV)  73– GLYCOPROTEIN NCVP5 161 PVS10_ROTBU MINOROUTER BOVINE ROTAVIRUS (GROUP C /  17– CAPSID STRAIN SHINTOKU) 58PROTEIN PVS10_ROTH2 NONSTRUCTURAL BOVINE ROTAVIRUS (STRAIN UK)  73–GLYCOPROTEIN NCVP5 161 PVS10_ROTH7 NONSTRUCTURAL HUMAN ROTAVIRUS (STRAINA28)  73– GLYCOPROTEIN NCVP5 162 PVS10_ROTH8 NONSTRUCTURAL HUMANROTAVIRUS (STRAIN A64 /  73– GLYCOPROTEIN NCVP5 CLONE 2) 162 PVS10_ROTHCNONSTRUCTURAL HUMAN ROTAVIRUS (STRAIN A64 /  73– GLYCOPROTEIN NCVP5CLONE 6) 162 PVS10_ROTHW MINOR OUTER HUMAN ROTAVIRUS (GROUP C / 121–CAPSID STRAIN BRISTOL) 153 PROTEIN PVS10_ROTS1 NONSTRUCTURAL HUMANROTAVIRUS (SEROTYPE 1  73– GLYCOPROTEIN NCVP5 / 136 STRAIN WA)PVS11_ROTGA NONSTRUCTURAL SIMIAN 11 ROTAVIRUS (STRAIN SA11)  73–GLYCOPROTEIN NCVP5 162 PVS11_ROTG1 NONSTRUCTURAL ROTAVIRUS (GROUP B / 24–  96– PROTEIN STRAIN ADRV) (ADULT 65 130 DIARRHEA ROTA PVS11_ROTH5NONSTRUCTURAL ROTAVIRUS (GROUP B /  9– PROTEIN STRAIN 1D1R) 68PVS11_ROTH6 MINOR OUTER HUMAN ROTAVIRUS (SEROTYPE 100– CAPSID 2 / STRAINRV-5) 145 PROTEIN PVS11_ROTHB MINOR OUTER HUMAN ROTAVIRUS (SEROTYPE 107–CAPSID 1 / STRAIN 69M) 144 PROTEIN PVS11_ROTHD MINOR OUTER HUMANROTAVIRUS (SEROTYPE 107– CAPSID G / STRAIN B37) 144 PROTEIN PVS11_ROTHWMINOR OUTER HUMAN ROTAVIRUS (SEROTYPE 111– CAPSID 2 1 STRAIN DS1) 145PROTEIN PVS11_ROTS1 MINOR OUTER HUMAN ROTAVIRUS (SEROTYPE 111– CAPSID 1/ STRAIN WA) 145 PROTEIN PVS48_TBRVC MINOR OUTER SIMIAN 11 ROTAVIRUS111– CAPSID (STRAIN SA11) 145 PROTEIN PVSH_MUMP1 SATELLITE TOMATO BLACKRING VIRUS 217– RNA 48 KD (STRAIN C) (TBRV) 265 PROTEIN PVSH_MUMP2 SMALLMUMPS VIRUS (STRAIN SBL-1),  9– HYDROPHOBIC AND MUMPS VIRUS (STRAIN SBL)46 PROTEIN PVSH_MUMP4 SMALL MUMPS VIRUS (STRAIN  13– HYDROPHOBICEDINGBURGH 2), AND 47 PROTEIN (STRAIN EDINGB PVSH_MUMPA SMALL MUMPSVIRUS (STRAIN  13– HYDROPHOBIC EDINGBURGH 4) 47 PROTEIN PVSH_MUMPB SMALLMUMPS VIRUS (STRAIN  13– HYDROPHOBIC MATSUYAMA) 51 PROTEIN PVSH_MUMPESMALL MUMPS VIRUS (STRAIN  13– HYDROPHOBIC BELFAST) 52 PROTEINPVSH_MUMPJ SMALL MUMPS VIRUS (STRAIN  9– HYDROPHOBIC ENDERS) 46 PROTEINPVSH_MUMPK SMALL MUMPS VIRUS (STRAIN  9– HYDROPHOBIC JERYL-LYNN) 46PROTEIN PVSH_MUMPL SMALL MUMPS VIRUS (STRAIN  9– HYDROPHOBIC KILHAM) 51PROTEIN PVSH_MUMPM SMALL MUMPS VIRUS (STRAIN  13– HYDROPHOBIC BRISTOL 1)55 PROTEIN PVSH_MUMPT SMALL MUMPS VIRUS (STRAIN  17– HYDROPHOBICMIYAHARA VACCINE) 51 PROTEIN PVSH_MUMPU SMALL MUMPS VIRUS (STRAIN  13–HYDROPHOBIC TAKAHASHI) 47 PROTEIN PVSH_REOVD SMALL MUMPS VIRUS (STRAINURABE  13– HYDROPHOBIC VACCINE AM9) 47 PROTEIN PVSH_REOVJ SIGMA 1REOVIRUS (TYPE 3 / STRAIN  8– 127– 222– PROTEIN DEARING) 122 175 259PRECURSOR PVSH_REOVL SIGMA 1 REOVIRUS (TYPE 2 / STRAIN  1– PROTEIND5/JONES) 178 PRECURSOR PVS12_REOVD SIGMA 1 REOVIRUS (TYPE 1 / STRAIN 3– 112– PROTEIN LANG) 107 198 PRECURSOR PVS12_REOVL SIGMA 2 REOVIRUS(TYPE 3 / STRAIN 350– PROTEIN DEARING) 384 PVS1S_REOVD SIGMA 2 REOVIRUS(TYPE 1 / STRAIN 350– PROTEIN LANG) 384 PVS1S_REOVJ SIGMA 1-S REOVIRUS(TYPE 3 / STRAIN  85– PROTEIN DEARING) 119 PVST2_HEVBU SIGMA 1-SREOVIRUS (TYPE 2 / STRAIN  7– PROTEIN D5/JONES) 45 PVST2_HEVMESTRUCTURAL HEPATITIS E VIRUS (STRAIN 318– PROTEIN 2 BURMA) (HEV) 352PRECURSOR PVST2_HEVMY STRUCTURAL HEPATITIS E VIRUS (STRAIN 317– PROTEIN2 MEXICO) (HEV) 351 PRECURSOR PVST2_HEVPA STRUCTURAL HEPATITIS E VIRUS(STRAIN 318– PROTEIN 2 MYANMAR) (HEV) 352 PRECURSOR PVST2_HEVRHSTRUCTURAL HEPATITIS E VIRUS (STRAIN 318– PROTEIN 2 PAKISTAN) (HEV) 352PRECURSOR PVT3A_CAPV1 STRUCTURAL HEPATITIS E VIRUS (ISOLATE 186– PROTEIN2 RHESUS)(HEV) 220 PVT4_CAPV1 PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1)120– 158 PVT4_CAPVX T4 CAPRIPOXVIRUS (STRAIN INS-1)  86– PROTEIN 120PVTER_EBV T4 CAPRIPOXVIRUS (STRAIN KS-1)  86– PROTEIN 120 PVTER_HCMVAPROBABLE DNA EPSTEIN-BARR VIRUS (STRAIN 235– 595– PACKAGING B95-8)(HUMAN HERPESVIRUS 4) 290 629 PROTEIN PVTER_HSV6U PROBABLE DNA HUMANCYTOMEGALOVIRUS 417– 617– PACKAGING (STRAIN AD169) 451 658 PROTEINPVTER_HSVEB PROBABLE DNA HERPES SIMPLEX VIRUS (TYPE 468– PACKAGING 6 /STRAIN UGANDA-1102) 502 PROTEIN PVTER_HSV11 PROBABLE DNA EQUINEHERPESVIRUS TYPE 1  11– PACKAGING (STRAIN AB4P)(EHV-1) 45 PROTEINPVTER_HSVSA PROBABLE DNA ICTALURID HERPESVIRUS 1  98– 698– PACKAGING(CHANNEL CATFISH VIRUS) (CCV) 136 744 PROTEIN PVTER_VZVD PROBABLE DNAHERPESVIRUS SAIMIRI 226– PACKAGING (STRAIN 11) 267 PROTEIN PVV_P14HAPROBABLE DNA VARICELLA-ZOSTER VIRUS 588– PACKAGING (STRAIN DUMAS) (VZV)622 PROTEIN PVY1_SEND6 V PROTEIN HUMAN PARAINFLUENZA 4A  4– VIRUS(STRAIN TOSHIBA) 38 (P1V-4A) PY101_SSV1 Y1 PROTEIN SENDAI VIRUS (STRAIN6/94) 104– 138 PY108_SSV1 HYPOTHETICAL SULFOLOBUS VIRUS-LIKE PARTICLESSV1  16– 10.1 KD 80 PROTEIN PY110_SSV1 HYPOTHETICAL SULFOLOBUSVIRUS-LIKE  4– 10.8 KD PARTICLE SSV1 65 PROTEIN PY119_SSV1 HYPOTHETICALSULFOLOBUS VIRUS-LIKE  55– 11.0 KD PARTICLE SSV1 59 PROTEIN PY11K_TYDVAHYPOTHETICAL SULFOLOBUS VIRUS-LIKE  30– 11.9 KD PARTICLE SSV1 96 PROTEINPY12K_FCVC6 HYPOTHETICAL TOBACCO YELLOW DWARF VIRUS  43– 11.2 KD (STRAINAUSTRALIA) (TYDV) 87 PROTEIN PY12K_FCVF9 HYPOTHETICAL FELINE CALICIVIRUS(STRAIN  4– 12.2 KD CF1/68 F1V) (FCV) 38 PROTEIN IN COAT PROTEINPY12K_RHDV HYPOTHETICAL FELINE CALICIVIRUS (STRAIN  4– 12.1 KD F9) (FCV)38 PROTEIN IN COAT PROTEIN PY12K_RHDV3 HYPOTHETICAL RABBIT HEMORRHAGICDISEASE  13– 12.7 KD VIRUS (RHDV) 50 PROTEIN IN COAT PROTEI PY13K_CLVXHYPOTHETICAL RABBIT HEMORRHAGIC DISEASE  13– 12.7 KD VIRUS (STRAINV-351) (RHDV) 50 PROTEIN IN COAT PROTEIN PY13K_CLVN HYPOTHETICAL CASSAVALATENT VIRUS  40– 13.1 KD (STRAIN WEST KENYAN 144) 77 PROTEINPY13K_NPVOP HYPOTHETICAL CASSAVA LATENT VIRUS  43– 13.1 KD (STRAINNIGERIAN) 77 PROTEIN PY13K_SSV1 HYPOTHETICAL ORGYIA PSEUDOTSUGATA  16–14.5 KD MULTICAPSID POLYHEDROSIS 67 PROTEIN VIRUS IN 39 KD PROTEINPY14K_SSV1 HYPOTHETICAL SULFOLOBUS VIRUS-LIKE  2–  62– 13.2 KD PARTICLESSV1 36 96 PROTEIN PY168_ADE02 HYPOTHETICAL SULFOLOBUS VIRUS-LIKE  5–13.7 KD PARTICLE SSV1 39 PROTEIN PY16K_SSV1 HYPOTHETICAL HUMANADENOVIRUS TYPE 2 119– PROTEIN C-168 166 PY17K_SSV1 HYPOTHETICALSULFOLOBUS VIRUS-LIKE  1–  77– 15.6 KD PARTICLE SSV1 35 111 PROTEINPY18K_SSV1 HYPOTHETICAL SULFOLOBUS VIRUS-LIKE  1– 119– 17.1 KD PARTICLESSV1 45 153 PROTEIN PY20K_SSV1 HYPOTHETICAL SULFOLOBUS VIRUS-LIKE 102–18.0 KD PARTICLE SSV1 136 PROTEIN PY28K_SSV1 HYPOTHETICAL SULFOLOBUSVIRUS-LIKE  73– 20.4 KD PARTICLE SSV1 107 PROTEIN PY2_SOCMV HYPOTHETICALSULFOLOBUS VIRUS-LIKE 127– 28.5 KD PARTICLE SSV1 180 PROTEIN PY31K_SSV1HYPOTHETICAL SOYBEAN CHLOROTIC MOTTLE 117– PROTEIN 1 VIRUS 154PY32K_SSV1 HYPOTHETICAL SULFOLOBUS VIRUS-LIKE  7– 100– 31.5 KD PARTICLESSV1 97 141 PROTEIN PY38K_NPVAC HYPOTHETICAL SULFOLOBUS VIRUS-LIKE 230–31.7 KD PARTICLE SSV1 278 PROTEIN PY3_SOCMV HYPOTHETICAL AUTOGRAPHACALIFORNICA 133– 37.7 KD NUCLEAR POLYHEDROSIS VIRUS ( 241 PROTEINPY5K9_SSV1 HYPOTHETICAL SOYBEAN CHLOROTIC MOTTLE 115– PROTEIN 3 VIRUS149 PY7_SOCMV HYPOTHETICAL SULFOLOBUS VIRUS-LIKE  1– 5.9 KD PARTICLESSV1 51 PROTEIN PY85K_SSV1 HYPOTHETICAL SOYBEAN CHLOROTIC MOTTLE  56–PROTEIN 7 VIRUS 94 PY8_SOCMV HYPOTHETICAL SULFOLOBUS VIRUS-LIKE  81–503– 546– 658– 85.7 KD PARTICLE SSV1 125 537 587 700 PROTEIN PYB01_FOWPMHYPOTHETICAL SOYBEAN CHLOROTIC MOTTLE  46– PROTEIN 8 VIRUS 83PYB04_FOWPM HYPOTHETICAL FOWLPOX VIRUS (ISOLATE  74– 184– BAMH1-ORF1HP-438[MUNICH]) 115 221 PROTEIN PYB05_FOWPM HYPOTHETICAL FOWLPOX VIRUS(ISOLATE  29– BAMH1-ORF4 HP-438[MUNICH]) 70 PROTEIN PYB06_FOWPMHYPOTHETICAL FOWLPOX VIRUS (ISOLATE  3–  61– BAMH1-ORF5 HP-438[MUNICH])37 95 PROTEIN PYB07_FOWPM HYPOTHETICAL FOWLPOX VIRUS (ISOLATE 115–BAMH1-ORF5 HP-438[MUNICH]) 149 PROTEIN PYB10_FOWPM HYPOTHETICAL FOWLPOXVIRUS (ISOLATE 344– BAMH1-ORF7 HP-438[MUNICH]) 378 PROTEIN PYB12_FOWPMHYPOTHETICAL FOWLPOX VIRUS (ISOLATE 162– BAMH1-ORF10 HP-438[MUNICH]))253 PROTEIN PYB13_FOWPM HYPOTHETICAL FOWLPOX VIRUS (ISOLATE  4– 117–BAMH1-ORF12 HP-438[MUNICH]) 47 153 PROTEIN PYBL2_EBV HYPOTHETICALFOWLPOX VIRUS (ISOLATE 122– BAMH1-ORF13 HP-438[MUNICH]) 163 PROTEINPVDH1_HSVS7 HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN 458– BBLF2 B95-8)(HUMAN HERPESVIRUS 4) 506 PROTEIN PVF30_FOWP1 HYPOTHETICAL HERPESVIRUSSAIMIRI 147– 24.1 KD (STRAIN 484-77) 188 PROTEIN IN DHFR 3 REGIONPVGA1_HSVMB HYPOTHETICAL FOWLPOX VIRUS (STRAIN FP-1) 160– 30.9 KU 204PROTEIN PYGA1_HSVMM HYPOTHETICAL MAREK'S DISEASE HERPESVIRUS 176– 23.6KD (STRAIN BC-1) (MDHV) 211 PROTEIN IN GLYCOPROTEI PYH22_VACCVHYPOTHETICAL MAREK'S DISEASE HERPESVIRUS 176– 23.6 KD (STRAIN MD5)(MDHV) 211 PROTEIN IN GLYCOPROTEI PYHR3_VACCV HYPOTHETICAL VACCINIAVIRUS (STRAIN WR)  34–  95– 21.7 KD 78 139 HIND111-C PROTEIN PYKR4_EBVHYPOTHETICAL VACCINIA VIRUS (STRAIN WR)  24– 181– HOST RANGE 58 222 27.4KD PROTEIN PYL15_ADE41 HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN  16–BKRF4 B95-8) (HUMAN HERPESVIRUS 4) 58 PROTEIN PYLR2_EBV HYPOTHETICALHUMAN ADENOVIRUS TYPE 41  39– 12.4 KD 81 PROTEIN IN 33 KD PROTEINPYOR1_COYMV HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN  64– BLRF2 B95-8)(HUMAN HERPESVIRUS 4) 125 PROTEIN PYOR2_COYMV HYPOTHETICAL COMMELINAYELLOW MOTTLE  94– 23 KD VIRUS (COYMV) 147 PROTEIN PYOR2_LELVHYPOTHETICAL COMMELINA YELLOW MOTTLE  33– 15 KD VIRUS (COYMV) 77 PROTEINPYOR3_TTV1 HYPOTHETICAL LELYSTAD VIRUS (LV) 100– 28.4 KD 134 PROTEINPYOR5_ADEG1 HYPOTHETICAL THERMOPROTEUS TENAX VIRUS  14– 6.9 KD 1 (STRAINKRA1)(TTV1) 54 PROTEIN PYORA_TTV1 HYPOTHETICAL AVIAN ADENOVIRUS GAL1 70– 31.5 KD (STRAIN PHELPS) (FOWL 127 PROTEIN ADENOVIRU PYORD_TTV1HYPOTHETICAL THERMOPROTEUS TENAX VIRUS  21– 8.1 KD 1 (STRAIN KRA1)(TTV1) 67 PROTEIN PVORE_TTV1 HYPOTHETICAL THERMOPROTEUS TENAX VIRUS  6– 89– 15.4 KD 1 (STRAIN KRA1)(TTV1) 51 130 PROTEIN PVORL_TTV1HYPOTHETICAL THERMOPROTEUS TENAX VIRUS  78– 15.3 KD 1 (STRAIN KRA1)(TTV1) 122 PROTEIN PYORO_TTV1 HYPOTHETICAL THERMOPROTEUS TENAX VIRUS  1–26.8 KD 1 (STRAIN KRA1) (TTV1) 45 PROTEIN PYORT_TTV1 HYPOTHETICALTHERMOPROTEUS TENAX VIRUS  1– 7.3 KD 1 (STRAIN KRA1)(TTV1) 43 PROTEINPYORW_TTV1 HYPOTHETICAL THERMOPROTEUS TENAX VIRUS  4– 281– 38.7 KD 1(STRAIN KRA1) (TTV1) 38 315 PROTEIN PYP12_RTBV HYPOTHETICALTHERMOPROTEUS TENAX VIRUS  4– 12.1 KD 1 (STRAIN KRA1)(TTV1) 89 PROTEINPYP12_RTBVP HYPOTHETICAL RICE TUNGRO BACILLIFORM  33– P12 VIRUS (RTBV)72 PROTEIN PYP24_RTBV HYPOTHETICAL RICE TUNGRO BACILLIFORM  33– P12VIRUS (ISOLATE PHILIPPINES) (RTB 72 PROTEIN PYP24_RTBVP HYPOTHETICALRICE TUNGRO BACILLIFORM  51– 106– P24 VIRUS (RTBV) 101 157 PROTEINPYP46_RTBV HYPOTHETICAL RICE TUNGRO BACILLIFORM  51– 106– P24 VIRUS(ISOLATE PHILIPPINES) (RT 101 157 PROTEIN PYP46_RTBVP HYPOTHETICAL RICETUNGRO BACILLIFORM  49– 197– P46 VIRUS (RTBV) 111 231 PROTEINPYP63_NPVAC HYPOTHETICAL RICE TUNGRO BACILLIFORM  49– 197– P46 VIRUS(ISOLATE PHILIPPINES) (RT 111 231 PROTEIN PYP7A_TNVA HYPOTHETICALAUTOGRAPHA CALIFORNICA  32– PROTEIN IN NUCLEAR POLYHEDROSIS VIRUS ( 73P6.5 5′ REGION PYPOH_NPVAC HYPOTHETICAL TOBACCO NECROSIS VIRUS  1– P7A(STRAIN A) (TNV) 65 PROTEIN PYPOL_IPNV1 HYPOTHETICAL AUTOGRAPHACALIFORNICA 116– 23.6 KD NUCLEAR POLYHEDROSIS VIRUS ( 153 PROTEIN INPOLYHEDRIN 5 PYQ1_AMEPV HYPOTHETICAL INFECTIOUS PANCREATIC  25– 17.3 KDNECROSIS VIRUS (SEROTYPE 66 PROTEIN JASPER) PYQ3_AMEPV HYPOTHETICALAMSACTA MOOREI  9– 7.6 KD ENTOMOPOXVIRUS (AMEPV) 61 PROTEIN IN TK 5′REGION PYRF2_HSV6G HYPOTHETICAL AMSACTA MOOREI  1–  62– 149– PROTEIN INTK ENTOMOPOXVIRUS (AMEPV) 57 96 183 3′ REGION PVRF3_HSV6G HYPOTHETICALHERPES SIMPLEX VIRUS 193– PROTEIN RF2 (TYPE 6 / STRAIN GS) 264PYRF4_HSV6G HYPOTHETICAL HERPES SIMPLEX VIRUS 134– PROTEIN RF3 (TYPE 6 /STRAIN GS) 175 PYRP2_IRV6 HYPOTHETICAL HERPES SIMPLEX VIRUS 252– 404–PROTEIN RF4 (TYPE 6 / STRAIN GS) 286 442 PYRR1_EBV REPETITIVE CHILOIRIDESCENT VIRUS (CIV)  1– PROTEIN ORF2 (INSECT IRIDESCENT VIRUS TYP 45PYSR1_EBV HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN  96– BRRF1 B95-8)(HUMAN HERPESVIRUS 4) 130 PROTEIN PYTR1_EBV HYPOTHETICAL EPSTEIN-BARRVIRUS (STRAIN  98– BSRF1 B95-8) (HUMAN HERPESVIRUS 4) 177 PROTEINPYUB2_NPVOP HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN 390– BTRF1 B95-8)(HUMAN HERPESVIRUS 4) 424 PROTEIN PYVAC_VACCC HYPOTHETICAL ORGYIAPSEUDOTSUGATA  25– 170– 24.0 KD MULTICAPSID POLYHEDROSIS 69 204 PROTEINVIRUS IN UBIQUITIN 3′ RE PYVAG_VACCC HYPOTHETICAL VACCINIA VIRUS (STRAIN 29– 14.4 KD COPENHAGEN) 63 PROTEIN PYVAH_VACCC HYPOTHETICAL VACCINIAVIRUS (STRAIN  3– 9.3 KD COPENHAGEN) 37 PROTEIN PYVAN_VACCC HYPOTHETICALVACCINIA VIRUS (STRAIN  78– 14.5 KD COPENHAGEN) 112 PROTEIN PYVBH_VACCCHYPOTHETICAL VACCINIA VIRUS (STRAIN  23– 7.9 KD COPENHAGEN) 57 PROTEINPYVCC_VACCC HYPOTHETICAL VACCINIA VIRUS (STRAIN  5– 7.4 KD COPENHAGEN)39 PROTEIN PYVDB_VACCC HYPOTHETICAL VACCINIA VIRUS (STRAIN  11– 9.2 KDCOPENHAGEN) 48 PROTEIN PYVDB_VACCV HYPOTHETICAL VACCINIA VIRUS (STRAIN 29– 8.5 KD COPENHAGEN) 80 PROTEIN PYVDC_VACCV HYPOTHETICAL VACCINIAVIRUS (STRAIN WR)  46– 8.5 KD 80 PROTEIN PYVGB_VACCC HYPOTHETICALVACCINIA VIRUS (STRAIN WR)  7– 7.3 KD 41 PROTEIN PYVHA_VACCCHYPOTHETICAL VACCINIA VIRUS (STRAIN  10– 8.4 KD COPENHAGEN) 51 PROTEINHYPOTHETICAL VACCINIA VIRUS (STRAIN  9– 8.1 KD COPENHAGEN) 53 PROTEIN

TABLE VI 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL VIRAL(NON-BACTERIOPHAGE) PROTEINS All Viruses PCGENE 107x178x4 (nobacteriophages) AREA AREA AREA AREA AREA AREA AREA AREA AREA FILE NAMEPROTEIN VIRUS 1 2 3 4 5 6 7 8 9 P194K_TRVSY POT 194 KD PRO TOBACCORATTLE 387- - 1087-  1142-  VIRUS 414 1114 1169 (STRAIN SYM) PAANT_HDVAMDELTA ANTIGEN HEPATITIS DELTA 106- VIRUS 133 (ISOLATE AMERICAN)PAANT_HDVDJ DELTA ANTIGEN HEPATITIS DELTA 106- VIRUS 133 (ISOLATEAMERICAN) PAANT_HDVIT DELTA ANTIGEN HEPATITIS DELTA 106- VIRUS 133(ISOLATE AMERICAN) PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTA 106- VIRUS133 (ISOLATE AMERICAN) PAANT_KDVS1 DELTA ANTIGEN HEPATITIS DELTA  16-106- VIRUS 43 133 (ISOLATE AMERICAN) PAANT_HDVS2 DELTA ANTIGEN HEPATITISDELTA  16- 106- VIRUS 43 133 (ISOLATE AMERICAN) PAANT_HDVWO DELTAANTIGEN HEPATITIS DELTA 106- VIRUS 133 (ISOLATE AMERICAN) PAT3H_FOWPMANTI- FOWLPOX  72- THROMBIN-III VIRUS (ISOLATE 106 HOMOLOG 1 (P-4) 8[MUNICH]) PAT11_VACCV 94 KD A-TYPE VACCINIA  14-  67- 424- 570-INCLUSION PRO VIRUS 56 94 471 625 (STRAIN WR) PAT11_VARV 81 KD A-TYPEVARIOLA  67- 425- 571- INCLUSION PRO VIRUS 94 504 605 PAT12_HSV11 ALPHATRANS- HERPES SIMPLEX 308- IND FACTOR VIRUS 335 78 KD PRO (TYPE 1/STRAIN17) PAT12_HSV1F ALPHA TRANS- HERPES SIMPLEX 308- IND FACTOR VIRUS 335 77KD PRO (TYPE 1/STRAIN F) PAT12_HSVEB ALPHA TRANS- EQUINE HERPESVIRUS294- IND FACTOR TYPE 1 (STRAIN AB4P) 321 82 KD PRO PATIN_HSVEB ALPHATRANS- EQUINE HERPESVIRUS 255- IND PROTEIN TYPE 1 (STRAIN AB4P) 289PATI_COWPX A-TYPE COWPOX VIRUS  14-  57- 426- 572- 837-  934- 1234-INCLUSION 56 94 408 620 841 990 1261 PROTEIN PBZLF_EBV BZXF1 TRANS-EPSTEIN-BARR 193- ACTIVATOR VIRUS 220 PROTEIN (STRAIN B95-8) PCAHH_VACCCCELL SURFACE- VACCINIA  84- 117- BINDING VIRUS (STRAIN 111 144 PROTEINCOPENHAGEN) PCAHH_VACCV CELL SURFACE- VACCINIA  84- 117- BINDING VIRUS111 144 PROTEIN (STRAIN WR) PCAHH_VARV CELL SURFACE- VARIOLA  84- 117-BINDING VIRUS 111 144 PROTEIN PCELF_HSVEB CELL FUSION EQUINE HERPEVIRUS312- PROTEIN TYPE 1 (STRAINS 339 PRECURSOR AB4P and Ky A) PCGH2_HSVSACYCLIN HERPESVIRUS SAIMIRI 127- HOMOLOG (STRAIN 11) 154 PCOA1_POVHA COATPROTEIN HAMSTER 159- VP1 POLYOMAVIRUS 186 PCOA2_BFDV COAT PROTEINBUDGERIGAR 160- VP2 FLEDGLING 187 DISEASE VIRUS PCOA2_POVBO COAT PROTEINBOVINE  49- VP2 POLYOMAVIRUS 76 PCOA2_POVJC COAT PROTEIN POLYOMAVIRUS JC 37- VP2 64 PCOA2_POVLY COAT PROTEIN LYMPHOTROPIC 170- VP2 POLYOMAVIRUS204 PCOA2_POVMK COAT PROTEIN MOUSE POLYOMAVIRUS  22- VP2 (STRAIN KILHAM)49 PCOA2_SV40 COAT PROTEIN SIMIAN 178- VP2 VIRUS 40 205 PCOA3_AAV2PROBABLE COAT ADENO-ASSOCIATED 120- PROTEIN 3 VIRUS 1 147 PCOA3_TTV1COAT PROTEIN THERMOPROTEUS TENAX  3- TP3 VIRUS 1 (STRAIN KRAI) 30PCOAT_ADVG COAT PROTEIN ALEUTIAN MINK DISEASE 194- VP1 PARVOVIRUS(STRAIN G) 221 PCOAT_BLRV COAT PROTEIN BEAN LEAFROLL  96- VIRUS 123PCOAT_CAMVC COAT PROTEIN CAULIFLOWER MOSAIC  63- 193- 461- VIRUS 90 220488 (STRAIN CM-1841) PCOAT_CAMVD COAT PROTEIN CAULIFLOWER MOSAIC  64-194- VIRUS 91 221 (STRAIN D/H) PCOAT_CAMVE COAT PROTEIN CAULIFLOWERMOSAIC  63- 193- VIRUS 90 220 (STRAIN BBC) PCOAT_CAMVN COAT PROTEINCAULIFLOWER MOSAIC  63- 192- 461- VIRUS 90 219 488 (STRAIN NY8153)PCOAT_CAMVS COAT PROTEIN CAULIFLOWER MOSAIC  64- 194- VIRUS 91 221(STRAIN STRASBOURG) PCOAT_CARMV COAT PROTEIN CARNATION MOTTLE  16- VIRUS43 PCOAT_CHVP1 MAJOR CAPSID PARAMECIUM BURSARIA  41- PROTEIN CHLORELLA86 VIRUS 1 PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS 328- VIRUS 362PCOAT_CSMV COAT PROTEIN CHLORIS STRIATE  62- MOSAIC 89 VIRUS PCOAT_CYMVCOAT PROTEIN CLOVER YELLOW 170- MOSAIC 200 VIRUS PCOAT_FCVC6 COATPROTEIN FELINE CALICIVIRUS 566- (STRAIN CF1/68 FIV) 600 PCOAT_FCVF4 COATPROTEIN FELINE CALICIVIRUS 516- 566- (STRAIN JAPANESE F4) 543 600PCOAT_FCVF9 COAT PROTEIN FELINE CALICIVIRUS 519- 569- (STRAIN F9) 546603 PCOAT_FMVD PROBABLE COAT FIGWORT MOSAIC 220- 358- PROTEIN VIRUS 247285 (STRAIN DXS) PCOAT_LSV COAT PROTEIN LILY SYMPTOMLESS  32- 245- VIRUS700 273 PCOAT_MISV COAT PROTEIN MISCANTHUS STREAK 139- VIRUS 166PCOAT_ORSV COAT PROTEIN ODONTOGLOSSUM 106- RINGSPOT 133 VIRUSPCOAT_PAVHB PROBABLE COAT HUMAN PARVOVIRUS 524- 569- PROTEIN VP1 B19 551596 PCOAT_POPMV COAT PROTEIN POPLAR MOSAIC  46- VIRUS 73 (ISOLATE ATCCPV275) PCOAT_SOCMV COAT PROTEIN SOYBEAN CHLOROTIC 128- MOTTLE 162 VIRUSPCOAT_TAMV GENOME TAMARILLO MOSAIC  21- POLYPROTEIN VIRUS 48 PCOAT_TAVCOAT PROTEIN TOMATO ASPERMY  23- VIRUS 50 PCOAT_TBSVB COAT PROTEINTOMATO BUSHY STUNT  3-  41- VIRUS (STRAIN BS-3) 30 68 PCOAT_TBSVC COATPROTEIN TOMATO BUSHY STUNT  97- VIRUS (STRAIN CHERRY) 134 PCOAT_TCV COATPROTEIN TURNIP CRINKLE 232- VIRUS 259 PCOAT_TMGMV COAT PROTEIN TOBACCOMILD GREEN 104- MOSAIC 131 VIRUS PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC104- VIRUS (VULGARE) 131 PCOAT_TMVCO COAT PROTEIN TOBACCO MOSAIC  78-VIRUS 132 (STRAIN COWPEA) PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC 104-VIRUS 131 (STRAIN DAHLEMENSE) PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC104- VIRUS 131 (STRAIN ER) PCOAT_TMVO COAT PROTEIN TOBACCO MOSAIC 104-VIRUS 131 (STRAIN O and KOKUBU) PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC104- VIRUS 131 (STRAIN OM) PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC 104-VIRUS 131 (STRAIN TOMATO/L) PCOAT_TNVA COAT PROTEIN TOBACCO NECROSIS 90- VIRUS 117 STRAIN A) PCOAT_TRVPS COAT PROTEIN TOBACCO RATTLE 118-VIRUS 145 (STRAINS PSG and PLB), PCOAT_TYDVA COAT PROTEIN TOBACCO YELLOW 10- DWARF VIRUS 37 (STRAIN AUSTRALIA) PCOAT_TYMV COAT PROTEIN TURNIPYELLOW  41- MOSAIC 68 VIRUS PCOAT_TYMVA COAT PROTEIN TURNIP YELLOW  41-MOSAIC VIRUS 68 (AUSTRALIAN ISOLATE). PDNB2_ADE07 EARLY E2A HUMANADENOVIRUS  46- DNA-BINDING TYPE 7 73 PROTEIN PDNB1_EBV MAJOREPSTEIN-BARR 977- 1041-  DNA-BINDING VIRUS 1004 1068 PROTEIN (STRAINB95-8) PDNB1_HCMVA MAJOR HUMAN 437- DNA-BINDING CYTOMEGALOVIRUS 464PROTEIN (STRAIN AD169) PDNB1_HSVSA MAJOR HERPESVIRUS SAIMIRI 333- 512-DNA-BINDING (STRAIN 11) 368 539 PROTEIN PDNB1_MCMVS MAJOR MURINE 584-DNA-BINDING CYTOMEGALOVIRUS 618 PROTEIN (STRAIN SMITH) PDNB1_POVJCDNA-BINDING POLYOMAVIRUS JC  2- PROTEIN 29 PDNB1_SCMVC MAJOR SIMIAN 435-532- DNA-BINDING CYTOMEGALOVIRUS 462 559 PROTEIN (STRAIN COLBURN)PDNL1_VACCC DNA LIGASE VACCINIA 104- 172- 358- VIRUS (STRAIN 131 199 385COPENHAGEN) PDNL1_VACCV DNA LIGASE VACCINIA 104- 172- 358- VIRUS 131 199385 (STRAIN WR) PDNL1_VARV DNA LIGASE VARIOLA 104- 172- 358- VIRUS 131199 385 PDPOL_ADE12 DNA HUMAN ADENOVIRUS 403- POLYMERASE TYPE 12 431PDPOL_CBEPV DNA CHORISTONEURA BIENNIS  23- 202- POLYMERASEENTOMOPOXVIRUS 64 240 PDPOL_CHVN2 DNA CHLORELLA 338- POLYMERASE VIRUSNY-2A 365 PDPOL_CHVP1 DNA PARAMECIUM BURSARIA 338- POLYMERASE CHLORELLA365 VIRUS 1 PDPOL_FOWPV DNA FOWLPOX  17- 370- 621- 772- POLYMERASE VIRUS51 416 655 799 PDPOL_HCMVA DNA HUMAN 753- POLYMERASE CYTOMEGALOVIRUS 780(STRAIN AD169) PDPOL_HPBDB DNA DUCK HEPATITIS B  5- POLYMERASE VIRUS 39(DROWN SHANGHAI DUCK ISOLATE S5) PDPOL_HPBDC DNA DUCK HEPATITIS B  5-POLYMERASE VIRUS 39 (STRAIN CHINA) PDPOL_HPBDW DNA DUCK HEPATITIS B  5-304- POLYMERASE VIRUS 39 331 (WHITE SHANGHAI DUCK ISOLATE S31)PDPOL_HPBGS DNA GROUND SQUIRREL 271- POLYMERASE HEPATITIS 325 VIRUSPDPOL_HPBHE DNA HERON HEPATITIS B  5- POLYMERASE VIRUS 39 PDPOL_KPBVPDNA HEPATITIS B 456- POLYMERASE VIRUS 483 (SUBTYPE ADW/STRAINPHILIPPINO/PFDW294) PDPOL_HPBVZ DNA HEPATITIS B 443- POLYMERASE VIRUS470 (SUBTYPE ADYW) PDPOL_HSV11 DNA ICTALURID 328- 710- POLYMERASEHERPESVIRUS 1 366 737 PDPOL_HSVSA DNA HERPES 625- POLYMERASE VIRUSSAIMIRI 652 (STRAIN 11) PDPOL_NPVAC DNA AUTOGRAPHA 598- POLYMERASECALIFORNICA 643 NUCLEAR POLYHEDROSIS VIRUS PDPOL_NPVLD DNA LYMANTRIADISPAR 357- POLYMERASE MULTICAPSID NUCLEAR 384 POLYHEDROSIS VIRUSPDPOL_VACCC DNA VACCINIA 770- POLYMERASE VIRUS (STRAIN 797 COPENHAGEN)PDPOL_VACCV DNA VACCINIA 770- POLYMERASE VIRUS 797 (STRAIN WR)PDPOL_VARV DNA VARIOLA 769- POLYMERASE VIRUS 796 PDPOL_WHV1 DNAWOODCHUCK HEPATITIS 285- POLYMERASE VIRUS 1 326 PDPOL_WHV59 DNAWOODCHUCK HEPATITIS 290- POLYMERASE VIRUS 59 331 PDPOL_WHV7 DNAWOODCHUCK HEPATITIS 212- 290- POLYMERASE VIRUS 7 242 331 PDPOL_WHV8 DNAWOODCHUCK HEPATITIS 211- 289- POLYMERASE VIRUS 8 241 330 PDPOL_WHV8I DNAWOODCHUCK HEPATITIS 212- 290- POLYMERASE VIRUS 8 242 331 PDTXH_CORBEDIPHTH TOXIN CORYNEPHAGE BETA 516- HOMOLOG 533 CRM228 PREC PDTX_CORBEDIPHTHERIA CORYNEPHAGE BETA 523- TOXIN 560 PRECURSOR PDTX_COROMDIPHTHERIA CORYNEPHAGE OMEGA 516- TOXIN 533 PRECURSOR PDUT_HSVE4 DEOXYU5′ EQUINE HERPESVIRUS  90- -TRIPHOSPH TYPE 4 (STRAIN 1942) 117NUCHYDROLASE PDUT_HSVSA DEOXYU 5′- HERPESVIRUS SAIMIRI 179- TRIPHOSPH(STRAIN 11) 213 NUCHYDROLASE PE1BL_ADE07 E1B PROTEIN. HUMAN ADENOVIRUS126- LARGE TYPE 7 153 T-ANTIGEN PE1BL_AEE40 E1B PROTEIN, HUMANADENOVIRUS 136- LARGE TYPE 40 163 T-ANTIGEN PE1BS_ADE12 E1B PROTEIN,HUMAN ADENOVIRUS  3- SMALL TYPE 32 30 T-ANTIGEN PEIDS_ADEM1 E1B PROTEIN,MOUSE ADENOVIRUS 122- SMALL TYPE 1 173 T-ANTIGEN PE314_ADE02 EARLY E3D14 HUMAN ADENOVIRUS  2- KD TYPE 2 29 PROTEIN PE314_ADE07 EARLY E3 15.3HUMAN ADENOVIRUS  21- KD TYPE 7 48 PROTEIN PE320_ADE03 EARLY E3 20.1HUMAN ADENOVIRUS  5-  70- KD GLYCO- TYPE 3 32 100 PROTEIN PE320_ADE35EARLY E3 20.3 HUMAN ADENOVIRUS  70- KD GLYCO- TYPE 35 107 PROTEINPE321_ADE35 EARLY E3 20.6 HUMAN ADENOVIRUS 125- KD GLYCO- TYPE 35 161PROTEIN PE3GL_ADEM1 EARLY E3 17.7 MOUSE ADENOVIRUS  38- KD GLYCO- TYPE 166 PROTEIN PGAR_EDV EARLY ANTIGEN EPSTEIN-BARR  55- PROTON R VIRUS 82(STRAIN B95-8) PEFTI_VARV EARLY TRANS VARIOLA 307- 470- FACTOR 70 KDVIRUS 341 497 SUBUNIT PENV_AVTRE ENV AVIAN RETICULO- 420- POLYPROTEINENDOTHELIOSIS 468 VIRUS PENV_AVISN ENV AVIAN SPLEEN  6- 426- POLYPROTEINNECROSIS 33 474 VIRUS PENV_BAEVM ENV BABOON ENDOGENOUS 395- POLYPROTEINVIRUS (STRAIN M7) 452 PENV_BIV06 ENV BOVINE IMMUNO-  17- 544- 631-POLYPROTEIN DEFICIENCY 44 603 695 VIRUS (ISOLATE 106) PENV_BIV27 ENVBOVINE IMMUNO-  17- 573- 660- POLYPROTEIN DEFICIENCY 44 632 724 VIRUS(ISOLATE 127) PENV_BLVAF ENV BOVINE LEUKEMIA 304- POLYPROTEIN VIRUS(AMERICAN 377 ISOLATE FLK) PENV_BLVAU ENV BOVINE LEUKEMIA 304-POLYPROTEIN VIRUS (AUSTRALIAN 377 ISOLATE) PENV_BLVAV ENV BOVINELEUKEMIA 304- POLYPROTEIN VIRUS (AMERICAN 377 ISOLATE VDM) PENV_BLVB2ENV BOVINE LEUKEMIA 311- POLYPROTEIN VIRUS (BELGIUM 377 ISOLATE LB285)PENV_BLVB5 ENV BOVINE LEUKEMIA 304- POLYPROTEIN VIRUS (BELGIUM 377ISOLATE LB59) PENV_BLVJ ENV BOVINE LEUKEMIA 304- POLYPROTEIN VIRUS(JAPANESE 377 ISOLATE BLV-1) PENV_CAEVG ENV CAPRINE ARTHRITIS 165-POLYPROTEIN ENCEPHALITIS 192 VIRUS (STRAIN G63) PENV_EIAV1 ENV EQUINEINFECTIOUS 668- POLYPROTEIN ANEMIA VIRUS 712 (CLONE P3.2-1) PENV_EIAV2ENV EQUINE INFECTIOUS 668- POLYPROTEIN ANEMIA VIRUS 695 (CLONE P3.2-2)PENV_EIAV3 ENV EQUINE INFECTIOUS 668- POLYPROTEIN ANEMIA VIRUS 712(CLONE P3.2-3) PENV_EIAV5 ENV EQUINE INFECTIOUS 669- POLYPROTEIN ANEMIAVIRUS 696 (CLONE P3.2-5) PENV_EIAV9 ENV EQUINE INFECTIOUS 668-POLYPROTEIN ANEMIA VIRUS 712 (CLONE 1369) PENV_EIAVC ENV EQUINEINFECTIOUS 668- POLYPROTEIN ANEMIA VIRUS 712 (CLONE CL22) PENV_EIAVW ENVEQUINE INFECTIOUS 668- POLYPROTEIN ANEMIA VIRUS 712 (STRAIN WSU5)PENV_EIAVY ENV EQUINE INFECTIOUS 668- POLYPROTEIN ANEMIA VIRUS 712(ISOLATE WYOMING) PENV_FENVI ENV FELINE ENDOGENOUS  33- 517- POLYPROTEINVIRUS ECE1 60 544 PENV_FTVTE ENV FELINE IMMUNO- 650- 722- POLYPROTEINDEFICIENCY VIRUS 680 749 (ISOLATE PETALUMA) PENV_FIVSD ENV FELINEIMMUNO- 639- 720- POLYPROTEIN DEFICIENCY VIRUS 668 747 (ISOLATE SANDIEGO) PENV_FIVT2 ENV FELINE IMMUNO- 640- 721- POLYPROTEIN DEFICIENCYVIRUS 679 748 (ISOLATE TM2) PENV_FLVC6 ENV FELINE LEUKEMIA 509-POLYPROTEIN PROVIRUS 538 (CLONE CFE-6) PENV_FLVGL ENV FELINE LEUKEMIA490- POLYPROTEIN VIRUS 519 (STRAIN A/GLASGOW11) PENV_FLVLB ENV FELINELEUKEMIA 510- POLYPROTEIN VIRUS 539 (STRAIN LAMBDA-B1) PENV_FLVSA ENVFELINE LEUKEMIA 487- POLYPROTEIN VIRUS 516 (STRAIN SARMA) PENV_FOAMV ENVHUMAN SPUMA-  14- 318- 865- POLYPROTEIN RETROVIRUS 41 355 893 PENV_FSVGAENV FELINE SARCOMA 510- POLYPROTEIN VIRUS 539 (STRAIN GARDNER- ARNSTEIN)PENV_FSVGB ENV FELINE SARCOMA 490- POLYPROTEIN VIRUS 519 (STRAIN GA)PENV_FSVSM ENV FELINE SARCOMA 493- POLYPROTEIN VIRUS 522 (STRAIN SM)PENV_GALV ENV GIBBON APE 176- 523- POLYPROTEIN LEUKEMIA VIRUS 203 564PENV_HTL1A ENV HUMAN T-CELL 342- POLYPROTEIN LEUKEMIA VIRUS TYPE 376 I(STRAIN ATK) PENV_HTL1C ENV HUMAN T-CELL LEUKEMIA 342- POLYPROTEIN VIRUSTYPE I 376 (CARIBBEAN ISOLATE) PENV_HTL1M ENV HUMAN T-CELL LEUKEMIA 342-POLYPROTEIN VIRUS TYPE 1 (ISOLATE 376 MT-2) PENV_HTLV2 ENV HUMAN T-CELLLEUKEMIA 336- POLYPROTEIN VIRUS TYPE II 370 PENV_HV1A2 ENV HUMANIMMUNODEFICIENCY 544- 630- 790- POLYPROTEIN VIRUS TYPE 1 592 682 825(ARV2/SF2 ISOLATE) PENV_HV1B1 ENV HUMAN IMMUNODEFICIENCY 545- 631- 791-POLYPROTEIN VIRUS TYPE 1 594 683 818 (B1110 ISOLATE) PENV_HV1B8 ENVHUMAN IMMUNODEFICIENCY 540- 626- 716- POLYPROTEIN VIRUS TYPE 1 589 678813 (B118 ISOLATE) PENV_HV1BN ENV HUMAN IMMUNODEFICIENCY 267- 338- 562-628- 787- POLYPROTEIN VIRUS TYPE 1 294 365 590 679 815 (DRAIN ISOLATE)PENV_HV1BR ENV HUMAN IMMUNODEFICIENCY 550- 636- 796- POLYPROTEIN VIRUSTYPE 1 599 688 823 (BRU ISOLATE) PENV_HV1C4 ENV HUMAN IMMUNODEFICIENCY397- 557- 643- 803- POLYPROTEIN VIRUS TYPE 1 (CDC-451 424 606 695 835ISOLATE) PENV_HVIEL ENV HUMAN IMMUNODEFICIENCY 255- 386- 543- 628-POLYPROTEIN VIRUS TYPE 1 296 413 591 680 (EL1 ISOLATE) PENV_HVIH2 ENVHUMAN IMMUNODEFICIENCY 545- 631- 791- POLYPROTEIN VIRUS TYPE 1 594 683818 (HXB2 ISOLATE) PENV_HV1H3 ENV HUMAN IMMUNODEFICIENCY 545- 631- 791-POLYPROTEIN VIRUS TYPE 1 594 683 818 (HXB3 ISOLATE) PENV_HV1J3 ENV HUMANIMMUNODEFICIENCY 350- 556- 642- 802- POLYPROTEIN VIRUS TYPE 1 377 605694 829 (JH3 ISOLATE) PENV_HV1JR ENV HUMAN IMMUNODEFICIENCY 336- 622-783- POLYPROTEIN VIRUS TYPE 1 363 675 811 (JRCSF ISOLATE) PENV_HV1KB ENVHUMAN IMMUNODEFICIENCY 274- 555- 637- 776- POLYPROTEIN VIRUS TYPE 1(STRAIN 301 506 677 824 KB-1-GP32) PENV_HVIMA ENV HUMAN IMMUNODEFICIENCY547- 633- 794- POLYPROTEIN VIRUS TYPE 1 595 707 826 (MAL ISOLATE)PENV_HV1MF ENV HUMAN IMMUNODEFICIENCY 543- 629- 789- POLYPROTEIN VIRUSTYPE 1 592 681 816 (MFA ISOLATE) PENV_HV1MN ENV HUMAN IMMUNODEFICIENCY343- 567- 632- 791- POLYPROTEIN VIRUS TYPE 1 370 595 684 819 (MNISOLATE) PENV_HV1N5 ENV HUMAN IMMUNODEFICIENCY 326- POLYPROTEIN VIRUSTYPE 1 360 (NEW YORK-5 ISOLATE) PENV_HV1ND ENV HUMAN IMMUNODEFICIENCY249- 536- 621- 783- POLYPROTEIN VIRUS TYPE 1 290 583 673 813 (NDKISOLATE) PENV_HV1OY ENV HUMAN IMMUNODEFICIENCY 544- 630- 789-POLYPROTEIN VIRUS TYPE 1 593 704 820 (OY1 ISOLATE) PENV_HV1PV ENV HUMANIMMUNODEFICIENCY 545- 631- 791- POLYPROTEIN VIRUS TYPE 1 594 683 818(PV22 ISOLATE) PENV_HV1RH ENV HUMAN IMMUNODEFICIENCY 280- 351- 554- 640-800- POLYPROTEIN VIRUS TYPE 1 307 378 602 692 832 (RF/HAT ISOLATE)PENV_HV1S1 ENV HUMAN IMMUNODEFICIENCY 333- 536- 622- 782- POLYPROTEINVIRUS TYPE 1 363 585 674 809 (SF162 ISOLATE) PENV_HV1S3 ENV HUMANIMMUNODEFICIENCY 541- 627- 787- POLYPROTEIN VIRUS TYPE 1 589 679 815(SF33 ISOLATE) PENV_HV1SC ENV HUMAN IMMUNODEFICIENCY 338- 545- 631-POLYPROTEIN VIRUS TYPE 1 365 593 683 (SC ISOLATE) PENV_HV1W1 ENV HUMANIMMUNODEFICIENCY 338- 545- 631- 791- POLYPROTEIN VIRUS TYPE 1 365 593683 818 (WMJ1 ISOLATE) PENV_HV1W2 ENV HUMAN IMMUNODEFICIENCY 334- 536-622- 782- POLYPROTEIN VIRUS TYPE 1 361 584 674 809 (WMJ2 ISOLATE)PENV_HV1Z2 ENV HUMAN IMMUNODEFICIENCY 255- 542- 628- 790- POLYPROTEINVIRUS TYPE 1 296 591 680 820 (7.2/CDC-Z34 ISOLATE) PENV_HV1Z3 ENV HUMANIMMUNODEFICIENCY 251- POLYPROTEIN VIRUS TYPE 1 (ZAIRE 3 292 ISOLATE)PENV_HV1Z6 ENV HUMAN IMMUNODEFICIENCY 256- 545- 630- 792- POLYPROTEINVIRUS TYPE 1 (ZAIRE 6 297 503 682 822 ISOLATE) PENV_HV1Z8 ENV HUMANIMMUNODEFICIENCY 266- 573- 634- 707- POLYPROTEIN VIRUS TYPE 1 307 601678 828 (Z-84 ISOLATE) PENV_HV1ZH ENV HUMAN IMMUNODEFICIENCY 545- 627-791- POLYPROTEIN VIRUS TYPE 1 (ZAIRE 594 666 823 HZ321 ISOLATE)PENV_HV2BE ENV HUMAN IMMUNODEFICIENCY  61- 532- 621- 653- POLYPROTEINVIRUS TYPE 2 88 591 648 697 (ISOLATE BEN) PENV_HV3CA ENV HUMANIMMUNODEFICIENCY 534- 623- 655- POLYPROTEIN VIRUS TYPE 2 593 650 699(ISOLATE CAM2) PENV_HV2D1 ENV HUMAN IMMUNODEFICIENCY  61- 523- 555- 644-POLYPROTEIN VIRUS TYPE 2 88 550 582 658 (ISOLATE D194) PENV_HV2G1 ENVHUMAN IMMUNODEFICIENCY  60- 524- 556- 613- 645- POLYPROTEIN VIRUS TYPE 2(ISOLATE 87 551 583 640 693 GHANA-1) PENV_HV2NZ ENV HUMANIMMUNODEFICIENCY  61- 524- 556- 613- 662- POLYPROTEIN VIRUS TYPE 2 88551 583 640 689 (ISOLATE NIH-Z) PENV_HV2RO ENV HUMAN IMMUNODEFICIENCY 58- 533- 622- POLYPROTEIN VIRUS TYPE 2 85 592 698 (ISOLATE ROD)PENV_HV252 ENV HUMAN IMMUNODEFICIENCY 442- 527- 550- 648- POLYPROTEINVIRUS TYPE 2 476 554 586 682 (ISOLATE ST/24 1C-2) PENV_HV25B ENV HUMANIMMUNODEFICIENCY 557- 614- POLYPROTEIN VIRUS TYPE 2 514 673 (ISOLATESBLISY) PENV_HV25T ENV HUMAN IMMUNODEFICIENCY 442- 527- 559- 644-POLYPROTEIN VIRUS TYPE 2 476 554 516 692 (ISOLATE ST) PENV_MCFF ENV MINKCELL FOCUS- 473- POLYPROTEIN FORMING MURINE 512 LEUKEMIA VIRUSPENV_MCFF3 ENV MINK CELL FOCUS- 488- POLYPROTEIN FORMING MURINE 515LEUKEMIA VIRUS (ISOLATE C1-3) PENV_MLVAV ENV AKV MURINE LEUKEMIA 517-POLYPROTEIN VIRUS 544 PENV_MLVCB ENV CAS-BR-E MURINE 510- POLYPROTEINLEUKEMIA 539 VIRUS PENV_MLVF5 ENV FRIEND MURINE 523- POLYPROTEINLEUKEMIA VIRUS 553 (ISOLATE 57) PENV_MLVFF ENV FRIEND MURINE 523-POLYPROTEIN LEUKEMIA VIRUS 553 (ISOLATE FB29) PENV_MLVFP ENV FRIENDMURINE 523- POLYPROTEIN LEUKEMIA VIRUS 553 (ISOLATE PVC-211) PENV_MLVHOENV HOMULV MURINE 510- POLYPROTEIN LEUKEMIA 540 VIRUS PENV_MLVKI ENVKIRSTEN MURINE  40- POLYPROTEIN LEUKEMIA VIRUS 81 PENV_MLVMO ENV MOLONEYMURINE 502- POLYPROTEIN LEUKEMIA VIRUS 543 PENV_MLVRD ENV RADIATIONMURINE 497- POLYPROTEIN LEUKEMIA 538 VIRUS PENV_MLVRK ENV RADIATIONMURINE 497- POLYPROTEIN LEUKEMIA VIRUS 538 (STRAIN KAPLAN) PENV_MMTVBENV MOUSE MAMMARY TUMOR 458- 562- POLYPROTEIN VIRUS (STRAIN BR6) 485 589PENV_MMTVG ENV MOUSE MAMMARY TUMOR 458- 562- POLYPROTEIN VIRUS (STRAINGR) 485 589 PENV_MPMV ENV SIMIAN MASON-PFIZER 422- POLYPROTEIN VIRUS 470PENV_MSVFB ENV FBI MURINE  57- POLYPROTEIN OSTEOSARCOMA 84 VIRUSPENV_OMVVS ENV OVINE LENTIVIRUS  42- 196- 780- POLYPROTEIN (STRAINSA-OMVV) 69 223 807 PENV_RMCFV ENV RAUSCHER MINK CELL 487- POLYPROTEINFOCUS-INDUCING 517 VIRUS PENV_SFV1 ENV SIMIAN FOAMY  14- 866-POLYPROTEIN VIRUS 41 901 (TYPE 1) PENV_SFV3L ENV SIMIAN FOAMY  18- 319-673- 863- POLYPROTEIN VIRUS 45 357 700 898 (TYPE 3/STRAIN LK3)PENV_SIVA1 ENV SIMIAN IMMUNO- 269- 561- 592- 652- 697- POLYPROTEINDEFICIENCY 310 518 619 679 724 VIRUS (AGM155 ISOLATE) PENV_SIVAG ENVSIMIAN IMMUNO- 270- 566- 597- 658- 703- POLYPROTEIN DEFICIENCY 301 593624 685 730 VIRUS (AGM3 ISOLATE) PENV_SIVAI ENV SIMIAN IMMUNO- 257- 336-548- 634- POLYPROTEIN DEFICIENCY 291 372 603 708 VIRUS (ISOLATE AGM/CLONE GRI-1) PENV_SIVAT ENV SIMIAN IMMUNO-  3- 268- 590- 651-POLYPROTEIN DEFICIENCY 30 298 617 678 VIRUS (TYO-1 ISOLATE) PENV_SIVCZENV CHIMPANZEE 160- 253- 336- 526- 627- POLYPROTEIN IMMUNODEFICIENCY 187289 366 584 654 VIRUS PENV_SIVGB ENV SIMIAN IMMUNO-  8- 158- 589- 784-POLYPROTEIN DEFICIENCY 35 185 650 816 VIRUS (ISOLATE GB 1) PENV_SIVM1ENV SIMIAN IMMUNO- 120- 550- 671- POLYPROTEIN DEFICIENCY 150 609 715VIRUS (MM142-83 ISOLATE) PENV_SIVM2 ENV SIMIAN IMMUNO- 156- 277-POLYPROTEIN DEFICIENCY VIRUS 215 289 (MM251 ISOLATE) PENV_SIVMK ENVSIMIAN IMMUNO- 553- POLYPROTEIN DEFICIENCY 608 VIRUS (K6W ISOLATE)PENV_SIVML ENV SIMIAN IMMUNO- 549- POLYPROTEIN DEFICIENCY 608 VIRUS (K78ISOLATE) PENV_SIVS4 ENV SIMIAN IMMUNO- 281- 553- 642- 691- POLYPROTEINDEFICIENCY 308 612 669 718 VIRUS (F236/SMH4 ISOLATE) PENV_SIVSP ENVSIMIAN IMMUNO- 286- 554- 646- POLYPROTEIN DEFICIENCY VIRUS 313 595 722(PBJ/BC13 ISOLATE) PENV_SMRVH ENV SQUIRREL MONKEY 400- POLYPROTEINRETROVIRUS (SMRV-H) 462 PENV_SRV1 ENV SIMIAN RETROVIRUS 409- POLYPROTEINSRV-1 471 PENV_VTLV ENV VISNA LENTIVIRUS  22- 773- POLYPROTEIN (STRAIN1514) 62 800 PENV_VILV1 ENV VISNA LENTIVIRUS  22- 780- POLYPROTEIN(STRAIN 62 807 1514/CLONE LV1-1KS1) PENV_VILV2 ENV VISNA LENTIVIRUS  22-782- POLYPROTEIN (STRAIN 62 809 1514/CLONE LV1-1KS2) PETF1_FOWP1 EARLYTRANS FOWLPOX 190- FACTOR 70 VIRUS 224 KD SUBUNIT (STRAIN FP-1)PETF1_SFVKA EARLY TRANS SHOPE FIBROMA 306- 469- 550- FACTOR 70 VIRUS 340496 587 KD SUBUNIT (STRAIN KASZA) PETF1_VACCC EARLY TRANS VACCINIA 307-470- FACTOR 70 VIRUS 341 497 KD SUBUNIT (STRAIN COPENHAGEN) PETT1_VACCVEARLY TRANS VACCINIA 307- 470- FACTOR 70 VIRUS 341 497 KD SUBUNIT(STRAIN WR) PETF2_VACCC EARLY VACCINIA  66- 174- 302- TRANSCRIPTIONVIRUS 97 210 332 FACTOR 82 (STRAIN COPENHAGEN) PETF2_VARV EARLY VARIOLA 66- 174- 302- TRANSCRIPTION VIRUS 97 210 332 FACTOR 82 PEXON_VZVDALKALINE VARICELLA-ZOSTER 109- EXONUCLEASE VIRUS (STRAIN DUMAS) 139PF1B2_ADE40 41 4 KD FIBER HUMAN ADENOVIRUS 179- PROTEIN TYPE 40 237PFIB2_ADE41 41.4 KD FIBER HUMAN ADENOVIRUS 178- PROTEIN TYPE 41 216PFIBP_ADE02 FIBER PROTEIN HUMAN ADENOVIRUS 308- TYPE 2 335 PFIBP_ADE40FIBER PROTEIN HUMAN ADENOVIRUS 324- 446- TYPE 40 351 473 PFIBP_ADE41FIBER PROTEIN HUMAN ADENOVIRUS 339- 461- TYPE 41 366 488 PFIBP_ADEB3FIBER PROTEIN BOVINE ADENOVIRUS 118- 164- TYPE 3 145 191 PFIBP_ADEM1FIBER PROTEIN MOUSE ADENOVIRUS 275- 325- TYPE 1 305 352 PFOSX_MSVFRV-FOS/FOX FBR MURINE 138- TRANSFORMING OSTEOSARCOMA 169 PROTEIN VIRUSPFOS_AVINK P55-V-FOS AVIAN RETROVIRUS 116- TRANSFORMING NK24 147 PROTEINPFOS_MSVFS P55-V-FOS FBJ MURINE 162- TRANSFORMING OSTEOSARCOMA 193PROTEIN VIRUS PGAG_AVISN GAG AVIAN SPLEEN 270- POLYPROTEIN NECROSIS 297VIRUS PGAG_EIAVY GAG EQUINE INFECTIOUS 144- POLYPROTEIN ANEMIA 171 VIRUS(ISOLATE WYOMING) PGAG_FOAMV GAG HUMAN SPUMARETROVIRUS 621- POLYPROTEIN648 PGAG_GALV GAG GIBBON APE LEUKEMIA 396- 447- POLYPROTEIN VIRUS 442474 PGAG_HVIA2 GAG HUMAN IMMUNO-  91- POLYPROTEIN DEFICIENCY 118 VIRUSTYPE 1 (ARV2/SF2 ISOLATE) PGAG_HVIJ3 GAG HUMAN IMMUNO-  91- POLYPROTEINDEFICIENCY 118 VIRUS TYPE 1 (JH3 ISOLATE) PGAG_HVIMN GAG HUMAN IMMUNO- 87- POLYPROTEIN DEFICIENCY 118 VIRUS TYPE 1 (MN ISOLATE) PGAG_HV2BE GAGHUMAN IMMUNO-  88- POLYPROTEIN DEFICIENCY 115 VIRUS TYPE 2 (ISOLATE BEN)PGAG_HV2D1 GAG HUMAN IMMUNO-  88- POLYPROTEIN DEFICIENCY 115 VIRUS TYPE2 (ISOLATE D194) PGAG_HV2NZ GAG HUMAN IMMUNO-  88- POLYPROTEINDEFICIENCY 115 VIRUS TYPE 2 (ISOLATE NIH-Z) PGAG_HV25T GAG HUMAN IMMUNO- 88- POLYPROTEIN DEFICIENCY 115 VIRUS TYPE 2 (ISOLATE ST) PGAG_IPHARETROVIRUS- HAMSTER 270- RELATED GAG INTRACISTERNAL 297 POLYPROTEIA-PARTICLE PGAG_IPMA RETROVIRUS- MOUSE INTRACISTERNAL  33-  69- 232-RELATED GAG A-PARTICLE 60 103 259 POLYPROTEI PGAG_IPMAE RETROVIRUS-MOUSE INTRACISTERNAL  96- RELATED GAG A-PARTICLE 130 POLYPROTEIPGAG_MMTVB GAG MOUSE MAMMARY TUMOR  84- 156- POLYPROTEIN VIRUS (STRAINBR6) 151 117 PGAG_MMTVC GAG MOUSE MAMMARY TUMOR  84- POLYPROTEIN VIRUS(STRAIN C3H) 116 PGAG_MMTVG GAG MOUSE MAMMARY TUMOR  84- 156-POLYPROTEIN VIRUS (STRAIN GR) 151 187 PGAG_MPMV GAG SIMIAN MASON-PFIZER222- POLYPROTEIN VIRUS (MPMV) 260 PGAG_SCVLA MAJOR COAT PROTEINSACCHAROMYCES 497- 624- CEREVISIAE 531 651 VIRUS L-A PGAG_SFVAI GAGSIMIAN IMMUNO- 473- POLYPROTEIN DEFICIENCY 507 VIRUS (ISOLATE AGM/CLONEGRI-1) PGAG_SIVMK GAG SIMIAN IMMUNO-  88- POLYPROTEIN DEFICIENCY 115(K6W ISOLATE) PGAG_SIVMS GAG SIMIAN IMMUNO-  88- POLYPROTEIN DEFICIENCY115 VIRUS (STM ISOLATE) PGAG_STVS4 GAG SIMIAN IMMUNO-  88- POLYPROTEINDEFICIENCY 115 (F236/SMH4 ISOLATE) PGAG_SIVSP GAG SIMIAN IMMUNO-  88-POLYPROTEIN DEFICIENCY VIRUS 115 (PDJ/BC13 ISOLATE) PGAG_SMSAV GAGSIMIAN SARCOMA 397- POLYPROTEIN VIRUS 443 PGAG_SRV1 GAG SIMIANRETROVIRUS 223- POLYPROTEIN SRV-1 261 PHELI_HSVEB PROBABLE EQUINEHERPESVIRUS 184- 321- HELICASE TYPE 1 (STRAIN AB4P) 211 348 PHELI_HSVSAPROBABLE HERPESVIRUS SAIMIRI 418- HELICASE (STRAIN 11) 449 PHELI_VZVDPROBABLE VARICELLA-ZOSTER 490- 701- HELICASE VIRUS 517 728 (STRAINDUMAS) PHEMA_CVBF HEMAGGLUTININ- BOVINE CORONAVIRUS 208- ESTERASE(STRAIN F15) 242 PRECURSOR PHEMA_CVBLY HEMAGGLUTIN- BOVINE CORONAVIRUS208- INESTERASE (STRAIN LY-138) 242 PRECURSOR PHEMA_CVBM HEMAGGLUTIN-BOVINE CORONAVIRUS 208- INESTERASE (STRAIN MEBUS) 242 PRECURSORPKEMA_CVBQ HEMAGGLUTIN- BOVINE CORONAVIRUS 208- INESTERASE (STRAINQUEBEC) 242 PRECURSOR PHEMA_CVHOC HEMAGGLUTIN- HUMAN CORONAVIRUS 208-INESTERASE (STRAIN OC43) 242 PRECURSOR PKEMA_IAA1C HEMAGGLUTINININFLUENZA A 387- PRECURSOR VIRUS 453 (STRAIN A/AICHI/2/68) PHEMA_IABANHEMAGGLUTININ INFLUENZA A  24- 371- PRECURSOR VIRUS (STRAIN 51 437A/BANGKOK/1/79) PHEMA_IABUD HEMAGGLUTININ INFLUENZA A 381- PRECURSORVIRUS (STRAIN 451 A/BUDGERIGAR/ HOKKAIDO/1/77) PHEMA_IACAO HEMAGGLUTINININFLUENZA A  9- VIRUS (STRAIN 36 A/CAMEL/MONGOLIA/82) PHEMA_IACKAHEMAGGLUTININ INFLUENZA A 381- PRECURSOR VIRUS (STRAIN 451 A/CHICKEN/ALABAMA/1/75) PHEMA_IACKG HEMAGGLUTININ INFLUENZA A  31- 382- 494-PRECURSOR VIRUS (STRAIN 58 441 528 A/CHICKEN/GERMANY/N/49) PHEMA_IACKPHEMAGGLUTININ INFLUENZA A 396- PRECURSOR VIRUS (STRAIN 426 A/CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ INFLUENZA A 396- PRECURSORVIRUS (STRAIN 426 A/CHICKEN/ PENNSYLVANIA/1370/83) PHEMA_IACKVHEMAGGLUTININ INFLUENZA A VIRUS 119- 384- PRECURSOR (STRAIN A/CHICKEN/146 443 VICTORIA/1/85) PHEMA_IADA1 HEMAGGLUTININ INFLUENZA A 381-PRECURSOR VIRUS (STRAIN 451 A/DUCK/ALBERTA/28/76) PHEMA_IADA2HEMAGGLUTININ INFLUENZA A 423- 499- PRECURSOR VIRUS (STRAIN 453 543A/DUCK/ALBERTA/60/76) PHEMA_IADA3 HEMAGGLUTININ INFLUENZA A 387-PRECURSOR VIRUS (STRAIN 453 A/DUCK/ALBERTA/78/76) PHEMA_IADA4HEMAGGLUTININ INFLUENZA A  29- 418- VIRUS (STRAIN 56 478A/DUCK/ALBERTA/35/76) PHEMA_IADCZ HEMAGGLUTININ INFLUENZA A 381-PRECURSOR VIRUS (STRAIN 451 A/DUCK/CZECHO- SLOVAKIA/56) PHEMA_IADE1HEMAGGLUTININ INFLUENZA A  21- 402- 506- PRECURSOR VIRUS (STRAIN 55 453533 A/DUCK/ENGLAND/1/56) PHEMA_IADH1 HEMAGGLUTININ INFLUENZA A 371-PRECURSOR VIRUS (STRAIN 437 A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2HEMAGGLUTININ INFLUENZA A 371- PRECURSOR VIRUS (STRAIN 437A/DUCK/HOKKAIDO/8/80) PHEMA_IADH3 HEMAGGLUTININ INFLUENZA A 371-PRECURSOR VIRUS (STRAIN 437 A/DUCK/HOKKAIDO/33/80) PHEMA_IADH4HEMAGGLUTININ INFLUENZA A 371- PRECURSOR VIRUS (STRAIN 437A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5 HEMAGGLUTININ INFLUENZA A 371-PRECURSOR VIRUS (STRAIN 437 A/DUCK/HOKKAIDO/21/82) PHEMA_IADH6HEMAGGLUTININ INFLUENZA A 371- PRECURSOR VIRUS (STRAIN 437A/DUCK/HOKKAIDO/9/85) PKEMA_IADH7 HEMAGGLUTININ INFLUENZA A 371-PRECURSOR VIRUS (STRAIN 437 A/DUCK/HOKKAIDO/10/85) PHEMA_IADIRHEMAGGLUTININ INFLUENZA A 415- PRECURSOR VIRUS (STRAIN 445A/DUCK/IRELAND/113/83) PHEMA_IADM2 HEMAGGLUTININ INFLUENZA A  21-PRECURSOR VIRUS (STRAIN 56 A/DUCK/MEMPHIS/546/76) PHEMA_IADM2HEMAGGLUTININ INFLUENZA A 387- PRECURSOR VIRUS (STRAIN 453A/DUCK/MEMPHIS/928/74) PHEMA_IADMA HEMAGGLUTININ INFLUENZA A  31-PRECURSOR VIRUS (STRAIN 58 A/DUCK/MANITOBA/1/53) PHEMA_IADNYHEMAGGLUTININ INFLUENZA A  21- PRECURSOR VIRUS (STRAIN 55 A/DUCK/NEWYORK/12/78) PHEMA_IADNZ HEMAGGLUTININ INFLUENZA A 381- PRECURSOR VIRUS(STRAIN 451 A/DUCK/NEW ZEALAND/31/76) PHEMA_IAD1 HEMAGGLUTININ INFLUENZAA  21- PRECURSOR VIRUS (STRAIN 55 A/DUCK/UKRAINE/1/60) PHEMA_IADU3HEMAGGLUTININ INFLUENZA A 387- PRECURSOR VIRUS (STRAIN 453A/DUCK/UKRAINE/1/63) PHEMA_IAEN6 HEMAGGLUTININ INFLUENZA A  24-PRECURSOR VIRUS (STRAIN 51 A/ENGLAND/878/69) PHEMA_IAEN7 HEMAGGLUTINININFLUENZA A  40- 387- PRECURSOR VIRUS (STRAIN 67 453 A/ENGLAND/321/77)PHEMA_IAFPR HEMAGGLUTININ INFLUENZA A 177- 384- PRECURSOR VIRUS 221 442(STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK/34) PHEMA_IAGRE HEMAGGLUTINININFLUENZA A 381- PRECURSOR VIRUS (STRAIN A/GREY 451 TEAL/AUSTRALIA/2/79)PHEMA_IAGU2 HEMAGGLUTININ INFLUENZA A 505- PRECURSOR VIRUS (STRAINA/GULL/ 532 MARYLAND/704/77) PHEMA_IAGUA HEMAGGLUTININ INFLUENZA A 504-PRECURSOR VIRUS (STRAIN A/GULL/ 531 ASTRAKHAN/227/84) PHEMA_IAHALHEMAGGLUTININ INFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452A/EQUINE/ALGIERS/72) PHEMA_IAHAR HEMAGGLUTININ INFLUENZA A  29-PRECURSOR VIRUS (STRAIN 56 A/HARBIN/1/88) PHEMA_IAHC6 HEMAGGLUTINININFLUENZA A  29- 194- 388- PRECURSOR VIRUS (STRAIN 56 221 457 A/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ INFLUENZA A  29- 194- 388-PRECURSOR VIRUS (STRAIN 56 221 457 A/EQUINE/ CAMBRIDGE/1/73) PHEMA_IAHCDHEMAGGLUTININ INFLUENZA A  29- 194- 388- PRECURSOR VIRUS (STRAIN 56 221457 A/EQUINE/C. DETROIT/1/64) PHEMA_IAHDE HEMAGGLUTININ INFLUENZA A  29-194- 388- PRECURSOR VIRUS (STRAIN 56 221 457 A/EQUINE/ DETROIT/1/64)PHEMA_IAHFO HEMAGGLUTININ INFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452A/EQUINE/ FONTAINEBLEAU/76) PHEMA_IAHK6 HEMAGGLUTININ INFLUENZA A 386-PRECURSOR VIRUS (STRAIN 452 A/EQUINE/ KENTUCKY/2/86) PHEMA_IAHK7HEMAGGLUTININ INFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452A/EQUINE/KENTUCKY/1/87) PHEMA_IAHLE HEMAGGLUTININ INFLUENZA A  29- 194-388- PRECURSOR VIRUS (STRAIN 56 221 457 A/EQUINE/ LEXINGTON/1/66)PHEMA_IAHLO HEMAGGLUTININ INFLUENZA A  29- 194- 388- PRECURSOR VIRUS(STRAIN 56 221 457 A/EQUINE/LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTINININFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452 A/EQUINE/MIAMI/1/63)PHEMA_IAHNM HEMAGGLUTININ INFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452A/EQUINE/NEW MARKET/76) PHEMA_IAHNN HEMAGGLUTININ INFLUENZA A  29- 194-388- PRECURSOR VIRUS (STRAIN 56 221 457 A/EQUINE/NEW MARKET/1/77)PHEMA_IAKPR HEMAGGLUTININ INFLUENZA A  29- 194- 388- PRECURSOR VIRUS(STRAIN 56 221 457 A/EQUINE/ PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTINININFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452 A/EQUINE/ ROMANIA/80)PHEMA_IAHSA HEMAGGLUTININ INFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452A/EQUINE/ SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ INFLUENZA A  29- 194-388- PRECURSOR VIRUS (STRAIN 56 221 457 A/EQUINE/ SAO PAULO/1/76)PHEMA_IAHSW HEMAGGLUTININ INFLUENZA A  29- 194- 388- PRECURSOR VIRUS(STRAIN) 56 221 457 A/EQUINE/ SWITZERLAND/137/72 PHEMA_IAHTEHEMAGGLUTININ INFLUENZA A 386- PRECURSOR VIRUS (STRAIN 452 A/EQUINE/TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTININ INFLUENZA A 386- PRECURSORVIRUS (STRAIN 455 A/EQUINE/TOKYO/71) PKEMA_IAHUR HEMAGGLUTININ INFLUENZAA 386- PRECURSOR VIRUS (STRAIN 452 A/EQUINE/ URUGUAY/1/63) PHEMA_IAJAPHEMAGGLUTININ INFLUENZA A 196- PRECURSOR VIRUS (STRAIN 223A/JAPAN/305/57) PHEMA_IAKIE HEMAGGLUTININ INFLUENZA A  29- 425-PRECURSOR VIRUS (STRAIN 56 478 A/KIEV/59/79) PHEMA_IALEN HEMAGGLUTINININFLUENZA A  29- 425- PRECURSOR VIRUS (STRAIN 56 478 A/LENINGRAD/54/1)PHEMA_IAMAA HEMAGGLUTININ INFLUENZA A 380- PRECURSOR VIRUS (STRAIN 450A/MALLARD/ ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININ INFLUENZA A 385-PRECURSOR VIRUS (STRAIN 455 A/MALLARD/ ASTRAKHAN/263/82) PHEMA_IAMAOHEMAGGLUTININ INFLUENZA A 387- PRECURSOR VIRUS (STRAIN 453 A/MALLARD/NEWYORK/6874/7B) PHEMA_IAME1 HEMAGGLUTININ INFLUENZA A  40- 387- PRECURSORVIRUS (STRAIN 67 453 A/MEMPHIS/1/71) PHEMA_IAME2 HEMAGGLUTININ INFLUENZAA  40- 387- PRECURSOR VIRUS (STRAIN 67 453 A/MEMPHIS/102/72) PHEMA_IAME6HEMAGGLUTININ INFLUENZA A  24- 371- PRECURSOR VIRUS (STRAIN 51 437A/MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININ INFLUENZA A  31- 382-PRECURSOR VIRUS (STRAIN 58 441 A/MINK/SWEDEN/84) PHEMA_IANT6HEMAGGLUTININ INFLUENZA A 387- PRECURSOR VIRUS (STRAIN 453 A/NT/60/68)PHEMA_IAPIL HEMAGGLUTININ INFLUENZA A 505- PRECURSOR VIRUS (STRAIN 534A/PILOT WHALE/ MAINE/328/84) PHEMA_IAPUE HEMAGGLUTININ INFLUENZA A  29-425- PRECURSOR VIRUS (STRAIN 56 478 A/PUERTO RICO/8/34) PHEMA_IAQU7HEMAGGLUTININ INFLUENZA A  24- PRECURSOR VIRUS (STRAIN 51 A/QU/7/70)PHEMA_IARUD HEMAGGLUTININ INFLUENZA A 381- PRECURSOR VIRUS (STRAIN A/451 RUDDY TURNSTONE/NEW JERSEY/47/85) PHEMA_IASE2 HEMAGGLUTINININFLUENZA A 381- PRECURSOR VIRUS (STRAIN A/SEAL/ 451MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ INFLUENZA A  28- 160-506- PRECURSOR VIRUS (STRAIN 56 187 547 A/SHEARWATER/AUSTRALIA/12)PHEMA_IASTA HEMAGGLUTININ INFLUENZA A 119- 384- PRECURSOR VIRUS 146 443(STRAIN A/STARLING/ VICTORIA/5156/SS) PHEMA_IATAI HEMAGGLUTINININFLUENZA A  29- PRECURSOR VIRUS (STRAIN 56 A/TAIWAN/1/86) PHEMA_IATKIHEMAGGLUTININ INFLUENZA A 415- PRECURSOR VIRUS (STRAIN 445 A/TURKEY/IRELAND/1378/831 PHEMA_IATKM HEMAGGLUTININ INFLUENZA A 381- PRECURSORVIRUS (STRAIN 451 A/TURKEY/ MINNESOTA/833/80) PHEMA_IATKO HEMAGGLUTINININFLUENZA A 507- PRECURSOR VIRUS (STRAIN 534 A/TURKEY/ ONTARIO/7732/66)PHEMA_IATKP HEMAGGLUTININ INFLUENZA A 424- 493- PRECURSOR VIRUS (STRAIN454 539 A/TURKEY/ ONTARIO/6118/68) PHEMA_IATKR HEMAGGLUTININ INFLUENZA A 32- 194- 381- PRECURSOR VIRUS (STRAIN 62 221 422 A/TURKEY/ OREGON/71)PHEMA_IATKW HEMAGGLUTININ INFLUENZA A 419- 500- PRECURSOR VIRUS (STRAIN449 536 A/TURKEY/ WISCONSIN/1/66) PHEMA_1ATRA HEMAGGLUTININ INFLUENZA A 21- PRECURSOR VIRUS (STRAIN A/TERN/ 55 AUSTRALIA/G70C/75) PHEMA_IAUDOHEMAGGLUTININ INFLUENZA A  40- 387- PRECURSOR VIRUS (STRAIN 67 453A/UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININ INFLUENZA A  29- 425-PRECURSOR VIRUS (STRAIN 56 478 A/USSR/90/77) PHEMA_IAV17 HEMAGGLUTINININFLUENZA A  41- 388- PRECURSOR VIRUS (STRAIN 68 454 A/VICTORIA/3/75)PHEMA_1AWIL HEMAGGLUTININ INFLUENZA A 424- PRECURSOR VIRUS (STRAIN 477A/WILSON-SMITH/33) PKEMA_IAXIA HEMAGGLUTININ INFLUENZA A  29- PRECURSORVIRUS (STRAIN 56 A/XIANFENG/3/89) PHEMA_IAZCO HEMAGGLUTININ INFLUENZA A 40- 387- PRECURSOR VIRUS (STRAIN A/SWINE/ 67 153 COLORADO/1/77)PHEMA_IAZH2 HEMAGGLUTININ INFLUENZA A 371- PRECURSOR VIRUS(STRAINA/SWINE/ 437 HONG KONG/81/78) PHEMA_1AZH3 HEMAGGLUTININ INFLUENZAA 371- PRECURSOR VIRUS (STRAINA/SWINE/ 437 HONG KONG/126/82) PHEMA_IAZINHEMAGGLUTININ INFLUENZA A 418- 506- PRECURSOR VIRUS (STRAIN A/SWINE/ 478547 INDIANA/1726/88) PHEMA_IAZNJ HEMAGGLUTININ INFLUENZA A 418- 506-PRECURSOR VIRUS (STRAIN A/SWINE/ 478 547 NEW JERSEY/11/76) PHEMA_IAZUKHEMAGGLUTININ INFLUENZA A 387- PRECURSOR VIRUS (STRAIN 453A/SWINE/UKKEL/1/84) PHEMA_INBBE HEMAGGLUTININ INFLUENZA B 400- 439-PRECURSOR VIRUS (STRAIN B/ 431 483 BEIJING/1/87) PHEMA_INBBOHEMAGGLUTININ INFLUENZA B 390- 429- PRECURSOR VIRUS (STRAIN 421 473B/BONN/43) PHEMA_INBEN HEMAGGLUTININ INFLUENZA B 398- 437- PRECURSORVIRUS (STRAIN 429 481 B/ENGLAND/222/82) PHEMA_INBHX HEMAGGLUTINININFLUENZA B 391- 429- PRECURSOR VIRUS (STRAIN 418 473 B/HONG KONG/8/73)PHEMA_INBLE HEMAGGLUTININ INFLUENZA B 399- 438- PRECURSOR VIRUS (STRAIN430 482 B/LEE/40) PHEMA_INBMD HEMAGGLUTININ INFLUENZA B 389- 428-PRECURSOR VIRUS (STRAIN 420 472 B/MARYLAND/59) PHEMA_INBME HEMAGGLUTINININFLUENZA B 393- 432- PRECURSOR VIRUS (STRAIN 424 476 B/MEMPHIS/6/86)PHEMA_INBOR HEMAGGLUTININ INFLUENZA B 398- 437- PRECURSOR VIRUS (STRAIN429 481 B/OREGON/5/80) PHEMA_INBSI HEMAGGLUTININ INFLUENZA B 398- 437-PRECURSOR VIRUS (STRAIN B/ 429 481 SINGAPORE/222/79) PHEMA_INBUSHEMAGGLUTININ INFLUENZA B 391- 430- PRECURSOR VIRUS (STRAIN 422 474B/USSR/100/83) PHEMA_INBVI HEMAGGLUTININ INFLUENZA B 393- 432- PRECURSORVIRUS (STRAIN 424 476 B/VICTORIA/3/85) PHEMA_INBVK HEMAGGLUTINININFLUENZA B 400- 439- PRECURSOR VIRUS (STRAIN 431 483 B/VICTORIA/2/87)PHEMA_INCCA HEMAGGLUTININ INFLUENZA C 495- PRECURSOR VIRUS (STRAIN 571C/CALIFORNIA/78) PHEMA_INCEN HEMAGGLUTININ INFLUENZA C 483- PRECURSORVIRUS (STRAIN 559 C/ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ INFLUENZAC 483- PRECURSOR VIRUS (STRAIN 559 C/GREAT LAKES/ 1167/54) PHEMA_INCHYHEMAGGLUTININ INFLUENZA C 482- PRECURSOR VIRUS (STRAIN 558 C/HYOGO/1/83)PHEMA_INCJH HEMAGGLUTININ INFLUENZA C 496- PRECURSOR VIRUS (STRAIN C/572 JOHANNESBURG/1/66) PKEMA_INCKY HEMAGGLUTININ INFLUENZA C 482-PRECURSOR VIRUS (STRAIN 558 C/KYOTO/41/B2) PHEMA_INCMI HEMAGGLUTINININFLUENZA C 482- PRECURSOR VIRUS (STRAIN 558 C/MISSISSIPPI/80)PHEMA_INCNA HEMAGGLUTININ INFLUENZA C 482- PRECURSOR VIRUS (STRAIN 558C/NARA/12) PHEMA_INCP1 HEMAGGLUTININ INFLUENZA C 483- PRECURSOR VIRUS(STRAIN 559 C/PIG/BEIJING/ 10/81) PHEMA_INCP2 HEMAGGLUTININ INFLUENZA C483- PRECURSOR VIRUS (STRAIN 559 C/PIG/BEIJING/ 115/81) PHEMA_INCP3HEMAGGLUTININ INFLUENZA C 483- PRECURSOR VIRUS (STRAIN 559C/PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININ INFLUENZA C 483-PRECURSOR VIRUS (STRAIN 559 C/TAYLOR/1233/47) PHEMA_INCYA HEMAGGLUTINININFLUENZA C 483- PRECURSOR VIRUS (STRAIN 559 C/YAMAGATA/10/81)PHEMA_NDVA HEMAGGLUTININ- NEWCASTLE DISEASE  64- NEURAMINIDASE VIRUS(STRAIN 91 AUSTRALIA-VICTORIA/32) PHEMA_NDVB HEMAGGLUTININ- NEWCASTLEDISEASE  64- NEURAMINIDASE VIRUS (STRAIN 91 BEAUDETTE C/45) PHEMA_NDVDHEMAGGLUTININ- NEWCASTLE DISEASE  64- NEURAMINIDASE VIRUS 91 (STRAIND26/76) PHEMA_NDVH HEMAGGLUTININ- NEWCASTLE DISEASE  64- NEURAMINIDASEVIRUS (STRAIN 91 B1-HITCHNER/47) PHEMA_NDVI HEMAGGLUTININ- NEWCASTLEDISEASE  64- NEURAMINIDASE VIRUS 91 (STRAIN ITALIEN/45) PHEMA_NDVMHEMAGGLUTININ- NEWCASTLE DISEASE  64- NEURAMINIDASE VIRUS 91 (STRAINMIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ- NEWCASTLE DISEASE  64-NEURAMINIDASE VIRUS 91 (STRAIN QUEENSLAND/66) PHEMA_NDVTG HEMAGGLUTININ-NEWCASTLE DISEASE  64- NEURAMINIDASE VIRUS (STRAIN 91 TEXAS G.B./48)PHEMA_NDVU HEMAGGLUTININ- NEWCASTLE DISEASE  64- NEURAMINIDASE VIRUS 91(STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ- PHOCINE DISTEMPER  39- 46- NEURAMINIDASE VIRUS 66 73 PHEMA_PI1HW HEMAGGLUTININ- HUMANPARAINFLUENZA  79- 366- NEURAMINIDASE 1 VIRUS (STRAIN 110 393WASHINGTON/1957) PHEMA_PI3B HEMAGGLUTININ- BOVINE PARAINFLUENZA   66-NEURAMINIDASE 3 VIRUS 93 PHEMA_PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 27- NEURAMINIDASE 3 VIRUS (STRAIN 61 NIH 47885) PHEMA_PI3HAHEMAGGLUTININ- HUMAN PARAINFLUENZA 3  27- NEURAMINIDASE VIRUS (STRAIN 61AUS/124854/74) PHEMA_PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA  27-NEURAMINIDASE 3 VIRUS (STRAIN 76 TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ-HUMAN PARAINFLUENZA  23- NEURAMINIDASE 3 VIRUS (STRAIN 70 TEX/9305/82)PHEMA_PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA  27- NEURAMINIDASE 3VIRUS (STRAIN 61 TEX/I2677/S3) PHEMA_PI3HW HEMAGGLUTININ- HUMANPARAINFLUENZA  27- NEURAMINIDASE 3 VIRUS (STRAIN 61 WASH/641/79)PHEMA_PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA  27- 3 VIRUS (STRAIN 61WASH/1511/73) PHEMA_RACVI HEMAGGLUTININ RACCOON POXVIRUS 166- 256- 214283 PHEMA_SEND5 HEMAGGLUTININ- SENDAI  79- NEURAMINIDASE VIRUS (STRAIN106 Z/HOST MUTANTS) PHEMA_SENDF HEMAGGLUTININ- SENDAI  79- NEURAMINIDASEVIRUS 106 (STRAIN FUSHIMI) PHEMA_SENDH HEMAGGLUTININ- SENDAI  79-NEURAMINIDASE VIRUS 106 (STRAIN HARRIS) PHEMA_SENDJ HEMAGGLUTININ-SENDAI  79- NEURAMINIDASE VIRUS 106 (STRAIN HVJ) PHEMA_SENDZHEMAGGLUTININ- SENDAI  79- NEURAMINIDASE VIRUS 106 (STRAIN Z) PHEMA_SV41HEMAGGLUTININ- SIMIAN  22- 394- NEURAMINIDASE VIRUS 41 52 421PHEMA_VACCC HEMAGGLUTININ VACCINIA 119- 175- 216- PRECURSOR VIRUS 146202 243 STRAIN COPENHAGEN) PHEMA_VACCI HEMAGGLUTININ VACCINIA 109- 175-216- PRECURSOR VIRUS 146 202 243 (STRAIN IHD-I) PHEMA_VACCTHEMAGGLUTININ VACCINIA 119- 175- 216- PRECURSOR VIRUS 146 202 243(STRAIN TIAN TAN) PHEMA_VACCV HEMAGGLUTININ VACCINIA 109- 175- 215-PRECURSOR VIRUS 146 202 242 (STRAIN WR) PHEMA_VARY HEMAGGLUTININ VARIOLA111- 177- 214- PRECURSOR VIRUS 148 211 244 PHEX9_ADE02 HEXON-ASSOCIATEDHUMAN ADENOVIRUS 100- PROTEIN TYPE 2 134 PHEX9_ADE05 HEXON-ASSOCIATEDHUMAN ADENOVIRUS 100- PROTEIN TYPE 5 134 PHEX9_ADE07 HEXON-ASSOCIATEDHUMAN ADENOVIRUS  97- PROTEIN TYPES 3 and 7 127 PHEX_ADE02 HEXON PROTEINHUMAN ADENOVIRUS 146- 359- 433- TYPE 2 173 386 460 PHEX_ADE05 HEXONPROTEIN HUMAN ADENOVIRUS 348- TYPE 5 375 PHEX_ADE40 HEXON PROTEIN HUMANADENOVIRUS 396- TYPE 40 423 PHEX_ADEB3 HEXON PROTEIN BOVINE ADENOVIRUS305- TYPE 3 338 PHI38_COWPX HEMORRHAGE- COWPOX  28- INDUCING 38 KD VIRUS55 PROTEIN PHRG_COWPX HOST RANGE COWPOX 462- PROTEIN VIRUS 489P1196_ASFB7 LATE PROTEIN AFRICAN SWINE FEVER  12- 1196L VIRUS (STRAINBA71V) 43 P1226_ASFB7 LATE PROTEIN AFRICAN SWINE FEVER 113- 1226R VIRUS(STRAIN BA71V) 147 PIBMP_CAMV4 INCLUSION CAULIFLOWER MOSAIC  17- BODYVIRUS (STRAIN D4) 44 MATRIX PROTEIN PIBMP_CAMVD INCLUSION CAULIFLOWERMOSAIC  17- BODY VIRUS (STRAIN D/H) 44 MATRIX PROTEIN PIBMP_CAMVPINCLUSION CAULIFLOWER MOSAIC 383- BODY VIRUS (STRAIN PV147) 410 MATRIXPROTEIN PIBMP_CERV INCLUSION CARNATION ETCHED  6- BODY RING 33 MATRIXVIRUS PROTEIN PIBMP_FMVD INCLUSION BODY FIGWORT MOSAIC 372- MATRIXPROTEIN VIRUS (STRAIN DXS) 407 PIBMP_SOCMV INCLUSION SOYBEAN CHLOROTIC 3- 331- BODY MOTTLE 48 358 MATRIX VIRUS PROTEIN PIC18_HCMVA PROB HUMAN294- PROC & CYTOMEGALOVIRUS 324 TRANSPORT (STRAIN AD169) PRO UL56PIC18_HSVSA PROBABLE HERPESVIRUS SAIMIRI  58- 482- PROC & (STRAIN 11) 85532 TRANSPORT PRO PIC18_MCMVS PROB MURINE 661- PROC A CYTOMEGALOVIRUS691 TRANSPORT (STRAIN SMITH) PRO PIE63_HSV11 TRANSCRIP- HERPES SIMPLEX248- TIONAL VIRUS 275 REGULATOR (TYPE 1/STRAIN 17) 1E63 PIE68_HSV11IMMEDIATE- HERPES SIMPLEX  40- EARLY PRO- VIRUS 67 TEIN 1E68 (TYPE1/STRAIN 17) PIE68_HSVSA IMMEDIATE- HERPESVIRUS SAIMIRI  48- EARLY(STRAIN 11) 78 PROTEIN PIR05_HCMVA HYPOTHETICAL HUMAN  22- PROTEIN IRL5CYTOMEGALOVIRUS 49 (STRAIN AD169) PIR12_HCMVA HYPOTHETICAL HUMAN  74-PROTEIN CYTOMEGALOVIRUS 162 IRL12 (STRAIN AD169) PIR13_HCMVAHYPOTHETICAL HUMAN  31- PROTEIN CYTOMEGALOVIRUS 62 IRL13 (STRAIN AD169)PKFES_FSVGA TYROSINE FELINE SARCOMA 106- KINASE VIRUS 150 TRANSF (STRAINGARDNER- PROTEIN ARNSTEIN) FES PKFGR_FSVGR TYROSINE FELINE SARCOMA 218-KINASE VIRUS 252 TRANSF (STRAIN GARDNER- PROTEIN RASHEED) FGRPKFMS_FSVMD TYROSINE FELINE SARCOMA 327- KINASE VIRUS 362 TRANSF (STRAINMCDONOUGH) PROTEIN PROTEIN PKFPS_FUJSV TYROSINE FUJINAMI SARCOMA 155-349- KINASE VIRUS 243 397 TRANSF PROTEIN FPS PKITH_AMEPV THYMIDINEAMSACTA MOOREI  47- KINASE ENTOMOPOXVIRUS 84 PKITH_CAPVK THYMIDINECAPRIPOXVIRUS  41- KINASE (STRAIN KS-I) 68 PKITH_HSVSA THYMIDINEHERPESVIRUS SAIMIRI 340- KINASE (STRAIN 11) 386 PKITH_ILTVT THYMIDINEINFECTIOUS 334- KINASE LARYNGOTRACHEITIS 361 VIRUS (STRAIN THORNE V882)PKR74_HSVII GENE 74 ICTALURID 491- PROTEIN KINASE HERPESVIRUS 1 518PKRB1_VACCC 30 KD VACCINIA 141- PROTEIN VIRUS 168 KINASE (STRAINCOPENHAGEN) HOMOLOG PKRB1_VACCV 30 KD VACCINIA 141- PROTEIN VIRUS 168KINASE (STRAIN WR) HOMOLOG PKRB2_VACCC POSSIBLE VACCINIA 147- PROTEINVIRUS 174 KINASE B12 (STRAIN COPENHAGEN) PKRB2_VACCV POSSIBLE VACCINIA147- PROTEIN VIRUS 174 KINASE B12 (STRAIN WR) PKRF1_VACCC POSSIBLEVACCINIA  47- PROTEIN VIRUS 74 KINASE F10 (STRAIN COPENHAGEN) PKRF1_VARVPOSSIBLE VARIOLA  47- PROTEIN VIRUS 74 KINASE F10 PKAOS_AVISU ROSTYROSINE AVIAN SARCOMA 111- KINASE TRANSF VIRUS 118 PROTEIN (STRAIN UR2)PKRYK_AVIRJ TYROSINE AVIAN RETROVIRUS  22- KINASE RPL30 49 TRANSFPROTEIN RYX PKYES_AVISY TYROSINE AVIAN SARCOMA 199- KINASE VIRUS 233TRANSF (STRAIN Y73) PROTEIN YES PL100_ADE02 LATE 100 KD HUMAN ADENOVIRUS386- PROTEIN TYPE 2 413 PL100_ADE05 LATE 100 KD HUMAN ADENOVIRUS 386-PROTEIN TYPE 5 413 PL100_ADE40 LATE 100 KD HUMAN ADENOVIRUS 191- PROTEINTYPE 40 231 PL100_ADE41 LATE 100 KD HUMAN ADENOVIRUS 206- PROTEIN TYPE41 233 PLMP1_EBV LATENT EPSTEIN-BARR 148- MEMBRANE VIRUS 175 PROTEIN 1(STRAIN B95-8) PLMP1_E8VC LATENT EPSTEIN-BARR 148- MEMBRANE VIRUS 175PROTEIN 1 (STRAIN CAO) PLMP1_EBVR LATENT EPSTEIN-BARR 148- MEMBRANEVIRUS 175 PROTEIN 1 (STRAIN RAJI) PLMP2_EBV GENE TERMINAL EPSTEIN-BARR294- PROTEIN VIRUS 321 (STRAIN B95-8) PMCEL_SFVKA MRNA CAPPING SHOPEFIBROMA  54- 289- 497- 622- ENZYME, VIRUS 156 316 524 656 LARGE (STRAINKASZA) SUBUNI PMCEL_VACCC MRNA CAPPING VACCINIA  85- 291- 630- ENZYME.LARGE VIRUS 112 318 657 SUBUNI (STRAIN COPENHAGEN) PMCEL_VACCV MRNACAPPING VACCINIA  85- 291- 630- ENZYME, VIRUS 112 318 657 LARGE (STRAINWR) SUBUNI PMCEL_VARV MRNA CAPPING VARIOLA  85- 291- 630- ENZYME, VIRUS112 318 657 LARGE SUBUNI PMCE_ASFB7 MRNA CAPPING AFRICAN SWINE FEVER279- ENZYME VIRUS 313 (STRAIN BA71V) PMOVP_CGMVS MOVEMENT CUCUMBER GREENMOTTLE 170- PROTEIN MOSAIC 197 VIRUS (WATERMELON STRAIN W) PMOVP_CGMVWMOVEMENT CUCUMBER GREEN MOTTLE 170- PROTEIN MOSAIC 197 VIRUS (WATERMELONSTRAIN SH) PMOVP_ORSV MOVEMENT ODONTOGLOSSUM  53- PROTEIN RINGSPOT 90VIRUS PMOVP_TOMVA MOVEMENT TOMATO MOSAIC  46- PROTEIN VIRUS 80 (STRAINLIIA) PMOVP_TOMVL MOVEMENT TOMATO MOSAIC  46- PROTEIN VIRUS 80 (STRAINLII) PMTCI_CHVNI MODIFICATION CHLORELLA 143- 229- METHYLASE CVIBI VIRUSNC-1A 170 256 PMTC2_CHVP1 MODIFICATION PARAMECIUM BURSARIA  4- 130-METHYLASE CVIAII CHLORELLA 31 172 VIRUS 1 PMYC_AVTM2 MYC AVIANMYELOCYTOMATOSIS 232- 375- TRANSFORMING VIRUS CMII 266 402 PROTEINPMYC_AVIMC MYC AVIAN MYELOCYTOMATOSIS 233- 376- TRANSFORMING VIRUS MC29267 403 PROTEIN PMYC_AVIMD MYC AVIAN MYELOCYTOMATOSIS 233- 376-TRANSFORMING VIRUS HBI 267 403 PROTEIN PMYC_AVIME MYC AVIAN RETROVIRUS239- 377- TRANSFORMING MH2E21 268 404 PROTEIN PMYC_AVIOK MYC AVIANRETROVIRUS OK10 227- 370- TRANSFORMING 261 397 PROTEIN PMYC_FLV MYCFELINE LEUKEMIA 393- TRANSFORMING VIRUS 420 PROTEIN PMYC_FLVTT MYCFELINE LEUKEMIA PRO 393- TRANSFORMING VIRUS FIT 420 PROTEIN PNCAP_BEVNUCLEOCAPSID BERNE  49- 129- PROTEIN VIRUS 76 156 PNCAP_BUNLCNUCLEOCAPSID BUNYAVIRUS LA CROSSE  82- PROTEIN 112 PNCAP_BUNSHNUCLEOCAPSID BUNYA  96- PROTEIN VIRUS SNOWSHOE HARE 123 PNCAP_BUNYWNUCLEOCAPSID BUNYAMWERA  48- 189- PROTEIN VIRUS 75 220 PNCAP_CCKFVNUCLEOCAPSID CRIMEAN-CONGO 223- PROTEIN HEMORRHAGIC 271 FEVER VIRUS(ISOLATE C68033) PNCAP_CDVO NUCLEOCAPSID CANINE DISTEMPER 140- PROTEINVIRUS 174 (STRAIN ONDERSTEPOORT) PNCAP_CHAV NUCLEOCAPSID CHANDIPURA  40-PROTEIN VIRUS 74 (STRAIN 1653514) PNCAP_CVCAE NUCLEOCAPSID CANINEENTERIC 191- PROTEIN CORONAVIRUS 227 (STRAIN K37B) PNCAP_CVPPUNUCLEOCAPSID PORCINE TRANSMISSIBLE 191- PROTEIN GASTROENTERITIS 227CORONAVIRUS (STRAIN PURD PNCAP_CVPR8 NUCLEOCAPSID PORCINE RESPIRATORY191- PROTEIN CORONAVIRUS (STRAIN 227 86/137004/BRITISH ISOLATPNCAP_CVPRM NUCLEOCAPSID PORCINE RESPIRATORY 191- PROTEIN (STRAIN RM4)227 PNCAP_DUGBV NUCLEOCAPSID DUGBE 238- PROTEIN VIRUS 265 PNCAP_FIPVNUCLEOCAPSID FELINE INFECTIOUS 182- PROTEIN VIRUS (STRAIN 79-1146) 209PNCAP_HAZV1 NUCLEOCAPSID HAZARA  6- 256- PROTEIN VIRUS (ISOLATE 33 283JC280) PNCAP_HRSV1 NUCLEOCAPSID HUMAN RESPIRATORY  4-  74- 112- PROTEINSYNCYTIAL 31 108 141 VIRUS (SUBGROUP D/STRAIN 18537) PNCAP_HRSVANUCLEOCAPSID HUMAN RESPIRATORY  4- PROTEIN SYNCYTIAL 31 VIRUS (STRAINA2) PNCAP_LASSG NUCLEOCAPSID LASSA  64- 147- PROTEIN VIRUS (STRAIN 99174 GA391) PNCAP_LASSJ NUCLEOCAPSID LASSA  64- 467- PROTEIN VIRUS(STRAIN 99 504 JOSIAH) PNCAP_LYCVA NUCLEOCAPSID LYMPHOCYTIC  64- PROTEINCHORIOMENINGITIS 97 VIRUS (STRAIN ARMSTRONG) PNCAP_MAGV NUCLEOCAPSIDMAGUARI  41- 192- PROTEIN VIRUS 68 219 PNCAP_MOPEI NUCLEOCAPSID MOPEIA 64- PROTEIN VIRUS 99 PNCAP_PI1HC NUCLEOCAPSID HUMAN PARAINFLUENZA 377-455- PROTEIN 1 VIRUS (STRAIN C39) 404 482 PNCAP_PI1HW NUCLEOCAPSID HUMANPARAINFLUENZA 377- 444- PROTEIN 1 VIRUS (STRAIN 404 4S8 WASHINGTON/1957)PNCAP_P13H4 NUCLEOCAPSID HUMAN PARAINFLUENZA 3 376- PROTEIN VIRUS(STRAIN NIH) 47885 403 PNCAP_PTPV NUCLEOCAPSID PUNTA TORO  3- PROTEINPHLEBOVIRUS 30 PNCAP_PUUMH NUCLEOCAPSID PUUMALA  2- PROTEIN VIRUS 29(STRAIN HALLNAS B1) PNCAP_PUUMS NUCLEOCAPSID PUUMALA  2- PROTEIN VIRUS29 (STRAIN SOTKAMO) PNCAP_PVM NUCLEOCAPSID PNEUMONIA  93- PROTEIN VIRUSOF MICE 120 PNCAP_RABVA NUCLEOCAPSID RABIES 133- PROTEIN VIRUS (STRAINAVO1) 167 PNCAP_RABVP NUCLEOCAPSID RABIES 133- PROTEIN VIRUS (STRAIN PV)167 PNCAP_RABVS NUCLEOCAPSID RABIES 133- PROTEIN VIRUS 167 (STRAIN SADB19) PNCAP_SEND5 NUCLEOCAPSID SENDAI 363- PROTEIN VIRUS 404 (STRAINZ/HOST MUTANTS) PNCAP_SENDE NUCLEOCAPSID SENDAI 363- PROTEIN VIRUS 404(STRAIN ENDERS) PNCAP_SENDZ NUCLEOCAPSID SENDAI 363- PROTEIN VIRUS(STRAIN Z) 404 PNCAP_SFSV NUCLEOCAPSID SANDFLY FEVER  4- PROTEINSICILIAN 31 VIRUS PNCAP_SV41 NUCLEOCAPSID SIMIAN 507- PROTEIN VIRUS 41534 PNCAP_TACV NUCLEOCAPSID TACARIBE  50- PROTEIN VIRUS 77 PNCAP_TOSVNUCLEOCAPSID TOSCANA  6- PROTEIN VIRUS 33 PNCAP_UUK NUCLEOCAPSIDUUKUNIEMI  68- PROTEIN VIRUS 102 PNCAP_VHSV0 NUCLEOCAPSID VIRALHEMORRHAGIC 284- PROTEIN SEPTICEMIA 314 VIRUS (STRAIN 07-71) PNCAP_VHSVMNUCLEOCAPSID VIRAL HEMORRHAGIC 149- 284- PROTEIN SEPTICEMIA 176 314VIRUS (STRAIN MAKAH) PNCAP_VSVIG NUCLEOCAPSID VESICULAR STOMATITIS  56-PROTEIN (SEROTYPE) 83 INDIANA/STRAIN GLASGOW PNCAP_VSVJO NUCLEOCAPSIDVESICULAR STOMATITIS  67- 338- PROTEIN VIRUS (SEROTYPE NEW) 94 365JERSEY/STRAIN OGDEN PNCAP_VSVSJ NUCLEOCAPSID VESICULAR STOMATITIS  56-PROTEIN VIRUS (STRAIN SAN JUAN) 83 PNEF_HVIEL NEGATIVE HUMAN IMMUNO- 81- FACTOR DEFICIENCY 119 VIRUS 1 (ELI ISOLATE) PNEF_HVIND NEGATIVEHUMAN IMMUNO-  81- FACTOR DEFICIENCY 119 VIRUS TYPE 1 (NDK ISOLATE)PNEF_HV1Z6 NEGATIVE HUMAN IMMUNO-  86- FACTOR DEFICIENCY 124 VIRUS TYPE1 (ZAIRE 6 ISOLATE) PNEF_SIVAI NEGATIVE SIMIAN IMMUNO-  96- FACTORDEFICIENCY 137 (ISOLATE AGM/ CLONE GRI-1) PNRAM_IABDA NEURAMINIDASEINFLUENZA A  47- VIRUS 81 (STRAIN A/BLACK DUCK/AUSTRALIA/702/78)PNRAM_IACAO NEURAMINIDASE INFLUENZA A  33- VIRUS (STRAIN 64A/CAMEL/MONGOLIA/82 PNRAM_IACHI NEURAMINIDASE INFLUENZA A  16-  50-VIRUS 43 91 (STRAIN A/CHILE/1/83) PNRAM_IADA1 NEURAMINIDASE INFLUENZA A 51- VIRUS (STRAIN 81 A/DUCK/ALBERTA /28/76) PNRAM_IADGE NEURAMINIDASEINFLUENZA A  21- VIRUS (STRAIN 48 /DUCK/GERMANY/49) PNRAM_IAFPWNEURAMINIDASE INFLUENZA A  10-  52- 197- VIRUS 48 80 224 (STRAIN A/FOWLPLAGUE VIRUS/WEYBRIDGE) PNRAM_IAHCO NEURAMINIDASE INFLUENZA A 197- 386-VIRUS (STRAIN 224 413 A/EQUINE/COR/16/74) PNRAM_IAHK1 NEURAMINIDASEINFLUENZA A  5-  46- 364- VIRUS (STRAIN 44 76 400A/EQUINE/KENTUCKY/I/81) PNRAM_IAKIE NEURAMINIDASE INFLUENZA A  50- VIRUS81 (STRAIN A/KIEV/59/79) PNRAM_IALEN NEURAMINIDASE INFLUENZA A  50-VIRUS 81 (STRAIN A/LENINGRAD /54/1) PNRAM_IAME1 NEURAMINIDASE INFLUENZAA  16-  50- VIRUS 43 81 (STRAIN A/MEMPHIS/1/71H- A/BELLAMY/42N)PNRAM_IAPAR NEURAMINIDASE INFLUENZA A  16-  50- VIRUS (STRAIN 43 81A/PARROT/ULSTER/7J) PNRAM_IAPUE NEURAMINIDASE INFLUENZA A  16- VIRUS(STRAIN 43 A/PUERTO RICO/8/34) PNRAM_IARUE NEURAMINIDASE INFLUENZA A 49- VIRUS (STRAIN 88 A/RUDDY TURNSTONE/NEW JERSEY/60/85) PNRAM_1ATRANEURAMINIDASE INFLUENZA A  49- VIRUS (STRAIN 82A/TERN/AUSTRALIA/G70C/75) PNRAM_IAUSS NEURAMINIDASE INFLUENZA A  50-VIRUS 81 (STRAIN A/USSR/90/77) PNRAM_IAWHM NEURAMINIDASE INFLUENZA A 49- VIRUS (STRAIN 88 A/WHALE/MAINE/1/84) PNRAM_IAWIL NEURAMINIDASEINFLUENZA A  16- VIRUS 43 (STRAIN A/WILSON-SMITH/33) PNRAM_INBLENEURAMINIDASE INFLUENZA B  4- VIRUS 35 (STRAUS B/LEE/40) PNS1_SIDEV PROBNONSTRUC BOMBYX DENSONUCLEOSIS 283- PRO PRECURSOR VIRUS 310 PNS2_SIDEVPROS NONSTRUC BOMBYX DENSONUCLEOSIS  42- vPRO PRECURSOR VIRUS 69PNSS_INSVN NON-STRUCTURAL IMPATIENS NECROTIC SPOT  95- PROTEIN VIRUS(STRAIN NL-07) 122 PNSS_TSWVB NON-STRUCTURAL TOMATO SPOTTED WILT  5-432- PROTEIN VIRUS 32 462 (BRAZILIAN ISOLATE CPNH1/BR-01) PNSS_TSWVLNON-STRUCTURAL TOMATO SPOTTED WILT  5- PROTEIN VIRUS 32 (STRAIN L3)PNTP1_AMEPV NUCLEOSIDE AMSACTA MOOREI  28- TRIPHOS- ENTOMOPOXVIRUS 69PHATASE 1 PNTP1_CBEPV NUCLEOSIDE CHORISTONEURA 122- 347- 524- TRIPHOS-BIENNIS 166 374 551 PHATASE 1 ENTOMOPOXVIRUS PNTP1_VACCC NUCLEOSIDEVACCINIA  65- 394- 514- TRIPHOS- VIRUS 92 421 587 PHATASE 1 (STRAINCOPENHAGEN) PNTP1_VACCV NUCLEOSIDE VACCINIA  65- 394- 514- TRIPHOS-VIRUS 92 421 587 PHATASE 1 (STRAIN WR) PNTP1_VARV NUCLEOSIDE VARIOLA300- 420- 455- TRIPHOS- VIRUS 327 447 493 PHATASE 1 PP100_HSV6U MAJORHERPES SIMPLEX  81- 189- 688- 785- ANTIGENIC VIRUS 108 216 715 812STRUCTL (TYPE 6/STRAIN PROTEIN UGANDA-1102) PPAP1_VACCC POLY(A) POLVACCINIA  88- CATALYTIC VIRUS 115 SUBUNIT (STRAIN COPENHAGEN)PPAP1_VACCV POLY(A) POL VACCINIA  88- CATALYTIC VIRUS 115 SUBUNIT(STRAIN WR) PPAP1_VARV POLY(A) POL VARIOLA  88- CATALYTIC VIRUS 115SUBUNIT PPAP2_CAPVK POLY(A) POL CAPRIPOXVIRUS 118- REG SUBUNIT (STRAINKS-1) 145 PPAP2_FOWPV POLY(A) POL FOWLPOX  27- REG SUBUNIT VIRUS 54PPE12_NPVAC 12.1 KD AUTOGRAPHA  61- PROTEIN CALIFORNICA 105 IN PE5′REGION NUCLEAR POLYHEDROSIS VIRUS PPE12_NPVOP 11.5 KD ORGYIAPSEUDOTSUGATA  61- PROTEIN MULTICAPSID 95 IN P26 5′REGION POLYHEDROSISVIRUS PPE38_NPVAC MAJOR IMMEDIATE AUTOGRAPHA 204- EARLY PROTEINCALIFORNICA 248 NUCLEAR POLYHEDROSIS VIRUS PPE48_NPVAC 48.3 KD INAUTOGRAPHA  4-  51- PE-P26 CALIFORNICA 38 78 INTERGENIC NUCLEAR REGIONPOLYHEDROSIS VIRUS PPEN3_ADEGX PENTON PROTEIN AVIAN ADENOVIRUS  96-GAL10 123 (STRAIN SA2) PPOL1_BAYMG GENOME BARLEY YELLOW 1272-  1775- 2236-  POLYPROTEIN 1 MOSAIC VIRUS 1299 1802 2263 (GERMAN ISOLATE)PPOL1_BAYMJ GENOME BARLEY YELLOW 1774-  2234-  POLYPROTEIN 1 MOSAICVIRUS 1801 2261 (JAPANESE STRAIN 11-1) PPOL1_GCMV RNA1 HUNGARIANGRAPEVINE 481- 1909-  POLYPROTEIN CHROME MOSAIC 508 1941 VIRUSPPOL1_GFLV RNA1 GRAPEVINE FANLEAF 170- 636- 958- 1161-  POLYPROTEINVIRUS 197 677 985 1195 PPOL1_TBRVS RNA1 TOMATO BLACK RING 1096- POLYPROTEIN VIRUS 1123 (STRAIN S) PPOL2_BAYMG GENOME BARLEY YELLOW 240-801- POLYPROTEIN 2 MOSAIC VIRUS 281 828 (GERMAN ISOLATE) PPOL1_BAYMJGENOME BARLEY YELLOW 240- 801- POLYPROTEIN 2 MOSAIC VIRUS 267 828(JAPANESE STRAIN 11-1) PPOL2_GCMV RNA2 HUNGARIAN GRAPEVINE  11-POLYPROTEIN CHROME MOSAIC 38 VIRUS PPOL2_GFLV RNA2 GRAPEVINE FANLEAF549- POLYPROTEIN VIRUS 576 PPOL2_TRSVR RNA2 TOMATO RINGSPOT 982-POLYPROTEIN VIRUS 1009 (ISOLATE RASPBERRY) PPOLG_BOVEV GENOME BOVINEENTEROVIRUS  17- 1030-  1145-  POLYPROTEIN (STRAIN VG-5-27) 44 1057 1172PPOLG_BVDVN GENOME BOVINE VIRAL DIARRHEA 629- 1082-  1303-  2233- 2476-  2609- 3613- POLYPROTEIN VIRUS (ISOLATE NADL) 660 1112 1330 22612503 2636 3642 PPOLG_BVDVS GENOME BOVINE VIRAL DIARRHEA 1303-  2143- 2519-  2802-  3523-  POLYPROTEIN VIRUS (STRAIN SD-1) 1333 2171 2546 28293550 PPOLG_BYMV GENOME BEAN YELLOW MOSAIC  96- POLYPROTEIN VIRUS 123PPOLG_COXA2 GENOME COXSACKIEVIRUS A21  7- 664- 1062-  1900-  POLYPROTEIN(STRAIN COE) 34 694 1099 1930 PPOLG_COXA9 GENOME COXSACKIEVIRUS A91040-  POLYPROTEIN (STRAIN GRIGGS) 1076 PPOLG_COXB1 GENOMECOXSACKIEVIRUS B1 645- 841- 1021-  POLYPROTEIN 672 868 1057 PPOLG_COXB3GENOME COXSACKIEVIRUS B3 1024-  1881-  POLYPROTEIN 1060 1908 PPOLG_COXB4GENOME COXSACKIEVIRUS B4 644- 1022-  POLYPROTEIN 673 1058 PPOLG_COXB5GENOME COXSACKIEVIRUS B5 1024-  POLYPROTEIN 1060 PPOLG_CYVV GENOMECLOVER YELLOW VEIN 120- POLYPROTEIN VIRUS 154 PPOLG_DEN1S GENOME DENGUE1858-  2890-  2989-  POLYPROTEIN VIRUS TYPE 1 1885 2935 3016 (STRAINSINGAPORE S275/90) PPOLG_DEN26 GENOME DENGUE 1544-  1858-  2908-  2982- 3117-  POLYPROTEIN VIRUS TYPE 2 1571 1885 2935 3016 3747 (STRAIN 166181)PPOLG_DEN27 GENOME DENGUE 1544-  1858-  2485-  2908-  2982-  3117-POLYPROTEIN VIRUS TYPE 2 1571 1885 2519 2935 3016 3147 (STRAIN16481-PDK53) PPOLG_DEN2J GENOME DENGUE 1544-  1858-  2908-  3117- 3346-  POLYPROTEIN VIRUS TYPE 2 1571 1885 2935 3147 3373 (STRAINJAMAICA) PPOLG_DEN2P GENOME DENGUE 1544-  1858-  2905-  2979-  3114- 3343- POLYPROTEIN VIRUS TYPE 2 1571 1885 2932 3013 3144 3370 (STRAINPR159/S1) PPOLG_DEN2T GENOME DENGUE 1134-  1448-  POLYPROTEIN VIRUS TYPE2 1161 1475 (STRAIN TONGA 1974) PPOLG_DEN3 GENOME DENGUE 837- 1542- 1857-  2494-  2980-  3345- POLYPROTEIN VIRUS TYPE 3 864 1569 1884 25213014 3372 PPOLG_DEN4 GENOME DENGUE 2885-  2977-  3342-  POLYPROTEINVIRUS TYPE 4 2930 3011 3369 PPOLG_ECIIG GENOME ECHOVIRUS 11 213-POLYPROTEIN (STRAIN GREGORY) 249 PPOLG_EMCV GENOME ENCEPHALOMYOCARDITIS 70- 1484-  1522-  POLYPROTEIN VIRUS 108 1518 1563 PPOLG_EMCVB GENOMEENCEPHALOMYOCARDITIS  70- 1486-  1524-  POLYPROTEIN VIRUS (STRAIN EMC-D97 1520 1565 NONDIABETOGENIC) PPOLG_EMCVD GENOME ENCEPHALOMYOCARDITIS 70- 1486-  1524-  POLYPROTEIN VIRUS (STRAIN 97 1520 1565 EMC-DDIABETOGENIC) PPOLG_ENMG3 GENOME MENGO  70- POLYPROTEINENCEPHALOMYOCARDITIS 108 VIRUS (STRAIN 37A) PPOLG_ENMGO GENOME MENGOENCEPHALO-  3- POLYPROTEIN MYOCARDITIS 41 VIRUS PPOLG_FMDV1 GENOMEFOOT-AND-MOUTH 302- 1119-  POLYPROTEIN DISEASE VIRUS 329 1146 (STRAINA10-61) PPOLG_FMDVA GENOME FOOT-AND-MOUTH 301- 1119-  POLYPROTEINDISEASE VIRUS 328 1146 (STRAIN A12) PPOLG_FMDVO GENOME FOOT-AND-MOUTH1119-  POLYPROTEIN DISEASE VIRUS 1146 (STRAINS O1K AND 01BFS)PPOLG_FMDVS GENOME FOOT-AND-MOUTH 101- POLYPROTEIN DISEASE VIRUS 128(STRAIN C1-SANTA PAU [C-58]) PPOLG_HCV1 GENOME HEPATITIS C 702-POLYPROTEIN VIRUS 729 (ISOLATE 1) PPOLG_HCVA GENOME HOG CHOLERA 699-1195-  1303-  1434-  3068-  3406- POLYPROTEIN VIRUS 726 1232 1333 14613095 3440 (STRAIN ALFORT) PPOLG_HCVB GENOME HOG CHOLERA 699- 1195- 3068-  3406-  1532-  POLYPROTEIN VIRUS 726 1232 3095 3440 3559 (STRAINBRESCIA) PPOLG_HCVBK GENOME HEPATITIS C 702- 1045-  POLYPROTEIN VIRUS729 1072 (ISOLATE BR) PPOLG_HCVH GENOME HEPATITIS C 702- 1045- POLYPROTEIN VIRUS 729 1072 (ISOLATE H) PPOLG_HCVJ6 GENOME HEPATITIS C374- 2089-  POLYPROTEIN VIRUS 401 2116 (ISOLATE HC-J6) PPOLG_HCVJ8GENOME HEPATITIS C 1049-  2089-  POLYPROTEIN VIRUS 1076 2116 (ISOLATEHC-J8) PPOLG_HCVJA GENOME HEPATITIS C 378- 702- 1045-  POLYPROTEIN VIRUS405 729 1072 (ISOLATE JAPANESE) PPOLG_HCVJT GENOME HEPATITIS C 702-1045-  POLYPROTEIN VIRUS 729 1072 (ISOLATE HC-JT) PPOLG_HCVTW GENOMEHEPATITIS C 702- 1045-  POLYPROTEIN VIRUS 729 1072 (ISOLATE TAIWAN)PPOLG_KPAV2 GENOME HEPATITIS A 203- 1021-  1117-  1454-  POLYPROTEINVIRUS 237 1048 1149 1481 (STRAIN 24A) PPOLG_HPAV4 GENOME HEPATITIS A203- 1021-  1117-  1454-  POLYPROTEIN VIRUS 237 1048 1149 1481 (STRAIN4JC) PPOLG_HPAV8 GENOME HEPATITIS A 203- 1021-  1117-  1454- POLYPROTEIN VIRUS 237 1048 1149 1481 (STRAIN 18F) PPOLG_HPAVC GENOMEHEPATITIS A 203- POLYPROTEIN VIRUS 237 (STRAIN CR326) PPOLG_HPAVG GENOMEHEPATITIS A 182- POLYPROTEIN VIRUS 216 (STRAIN GA76) PPOLG_HPAVH GENOMEHEPATITIS A 203- 1021-  1103-  POLYPROTEIN VIRUS 237 1048 1149 (STRAINHM-175) PPOLG_HPAVL GENOME HEPATITIS A 203- 1021-  1103-  POLYPROTEINVIRUS 237 1048 1149 (STRAIN LA) PPOLG_HPAVM GENOME HEPATITIS A 203-1021-  1103-  POLYPROTEIN VIRUS 237 1048 1149 (STRAIN MBB) PPOLG_HPAVSGENOME SIMIAN HEPATITIS A 207- 1025-  1115-  POLYPROTEIN VIRUS 241 10521192 (STRAIN AGM-27) PPOLG_HPAVT GENOME SIMIAN HEPATITIS A 203-POLYPROTEIN VIRUS 237 (STRAIN CY-145) PPOLG_HRV14 GENOME HUMANRHINOVIRUS 14  17- 559- 652- 1877-  POLYPROTEIN 44 586 619 1904PPOLG_HRW18 GENOME HUMAN RHINOVIRUS 1B 1132-  1855-  POLYPROTEIN 11591882 PPOLG_HRV2 GENOME HUMAN RHINOVIRUS 1 1125-  1552-  POLYPROTEIN 11521593 PPOLG_HRV89 GENOME HUMAN RHINOVIRUS 89 883- 1141-  1566-  1862- POLYPROTEIN 910 1168 1607 1889 PPOLG_HUEV7 GENOME HUMAN ENTEROVIRUS 70876- POLYPROTEIN (STRAIN J670/71) 910 PPOLG_IBDVO STRUCTURAL AVIANINFECTIOUS 231- POLYPROTEIN BURSAL DISEASE 277 VIRUS (STRAIN OH)PPOLG_JAEVI GENOME JAPANESE ENCEPHALITIS 214- 983- 2796-  POLYPROTEINVIRUS (STRAW SA-M) 248 1010 2823 PPOLG_JAEV5 GENOME JAPANESEENCEPHALITIS 214- 983- 2796-  POLYPROTEIN VIRUS (STRAIN SA(V)) 248 10102823 PPOLG_JAEVJ GENOME JAPANESE ENCEPHALITIS 214- 983- 2796- POLYPROTEIN VIRUS 248 1010 2823 (STRAIN JAOARS982) PPOLG_JAEVN GENOMEJAPANESE ENCEPHALITIS 141- 911- POLYPROTEIN VIRUS 175 938 (STRAINNAKAYAMA) PPOLG_KUNJM GENOME KUNJIN 980- POLYPROTEIN VIRUS 1007 (STRAINMRM61C) PPOLG_LANVT GENOME LANGAT 431- 1634-  POLYPROTEIN VIRUS (STRAINTP21) 465 1661 PPOLG_LANVY GENOME LANGAT 431- POLYPROTEIN VIRUS 465(STRAIN YELANTSEV) PPOLG_LIV GENOME LOUPING ILL 431- POLYPROTEIN VIRUS465 PPOLG_LIVSB GENOME LOUPING ILL 151- POLYPROTEIN VIRUS 185 (STRAIN SB526) PPOLG_MCFA GENOME MOSQUITO CELL 671- 3056-  3303-  POLYPROTEINFUSING AGENT 698 3083 3330 PPOLG_MDMV GENOME MAIZE DWARF MOSAIC  10-POLYPROTEIN VIRUS 37 PPOLG_MVEV GENOME MURRAY VALLEY 212- POLYPROTEINENCEPHALITIS 256 VIRUS PPOLG_OMV GENOME ORNITHOGALUM MOSAIC  24- 946-POLYPROTEIN VIRUS 51 973 PPOLG_PEMVC GENOME PEPPER MOTTLE 377- 704- 831-900- 1167-  1485- 1787- 2433- POLYPROTEIN VIRUS 404 738 858 927 12011512 1814 2464 (CALIFORNIA ISOLATE) PPOLG_POL1M GENOME POLIOVIRUS TYPE 11060-  1901-  POLYPROTEIN (STRAIN MAHONEY) 1100 1931 PPOLG_POL1S GENOMEPOLIOVIRUS TYPE 1 670- 1063-  1903-  POLYPROTEIN (STRAIN SABIN) 697 11011933 PPOLG_POL2L GENOME POLIOVIRUS TYPE 2 1061-  1901-  POLYPROTEIN(STRAIN LANSING) 1099 1931 PPOLG_POL2W GENOME POLIOVIRUS TYPE 2 1061- 1901-  POLYPROTEIN (STRAIN W-2) 1099 1931 PPOLG_POL32 GENOME POLIOVIRUSTYPE 3 1060-  1900-  POLYPROTEIN (STRAIN 23127) 1098 1930 PPOLG_POL3LGENOME POLIOVIRUS TYPE 3 1060-  1900-  POLYPROTEIN (STRAINS P3/LEON/37AND 1098 1930 P3/LEON 12A[I]B) PPOLG_PPVD GENOME PLUM POX POTYVIRUS 921-1498-  2771-  POLYPROTEIN (STRAIN D) 948 1525 2798 PPOLG_PPVEA GENOMEPLUM POX POTYVIRUS 1146-  POLYPROTEIN (STRAIN EL AMAR) 1187 PPOLG_PPVNAGENOME PLUM POX POTYVIRUS 920- 1497-  2770-  POLYPROTEIN (ISOLATE NAT)947 1524 2800 PPOLG_PPVRA GENOME PLUM POX POTYVIRUS 920- 1497-  2770- POLYPROTEIN (STRAIN RANKOVIC) 947 1524 2797 PPOLG_PRSVH GENOME PAPAYARINGSPOT 500- POLYPROTEIN VIRUS 527 (STRAIN P/MUTANT IIA) PPOLG_PRSVPGENOME PAPAYA RINGSPOT 391- POLYPROTEIN VIRUS 418 (STRAIN P/MUTANT IIA5-1) PPOLG_PRSVW GENOME PAPAYA RINGSPOT 489- POLYPROTEIN VIRUS 516(STRAIN W) PPOLG_PSBMV GENOME PEA SEED-BORNE MOSAIC 271- 1132-  1510- POLYPROTEIN VIRUS (STRAIN DPD1) 315 1177 1537 PPOLG_PVYC GENOME POTATO453- 701- POLYPROTEIN VIRUS Y 460 735 (STRAIN C (PVY) PPOLG_PVYHU GENOMEPOTATO 218- 433- 701- 1486-  1777-  POLYPROTEIN VIRUS Y 245 460 735 15131811 (STRAIN HUNGARIAN) PPOLG_PVYN GENOME POTATO 433- 701- 1486-  1777- POLYPROTEIN VIRUS Y (STRAIN N) 460 735 1513 1811 PPOLG_PVYO GENOMEPOTATO 433- 701- POLYPROTEIN VIRUS Y (STRAIN O) 460 735 PPOLG_PYFV1GENOME PARSNIP YELLOW FLECK 1124-  2707-  POLYPROTEIN VIRUS (ISOLATEP-121) 1151 2734 PPOLG_SUMVS GENOME SUGARCANE MOSAIC  10- POLYPROTEINVIRUS 37 (STRAIN SC) PPOLG_SVDVH GENOME SWINE VESICULAR 1024- POLYPROTEIN DISEASE VIRUS 1060 (STRAIN 11/3′ 76) PPOLG_SVDVU GENOME1024-  POLYPROTEIN 1060 PPOLG_TBEVS GENOME TICK-BORNE ENCEPHALITIS  87-234- 1632-  2265-  2909-  POLYPROTEIN VIRUS (STRAIN SOFJIN) 121 272 16612292 2936 PPOLG_TBEVW GENOME BORNE ENCEPHALITIS 1632-  POLYPROTEIN VIRUS1659 (WESTERN SUBTYPE) PPOLG_TEV GENOME TOBACCO ETCH 845- 1148-  1416- 1773-  POLYPROTEIN VIRUS 872 1175 1443 1800 PPOLG_TMEVB GENOME THEILER'SMURINE  79- 200- POLYPROTEIN ENCEPHALOMYELITIS 117 227 VIRUS STRAIN DEAN8386) PPOLG_TMEVD GENOME THEILER'S MURINE  90- 200- POLYPROTEINENCEPHALOMYELITIS 117 227 VIRUS (STRAIN DA) PPOLG_TMEVG GENOME THEILER'SMURINE  90- 200- POLYPROTEIN ENCEPHALOMYELITIS 117 227 VIRUS (STRAINGDVII) PPOLG_TUMV GENOME TURNIP MOSAIC 232- 773- POLYPROTEIN VIRUS 262800 PPOLG_TVMV GENOME TOBACCO VEIN MOTTLING 406- 670- 2708-  POLYPROTEINVIRUS 433 704 2742 PPOLG_WMV2 GENOME WATERMELON MOSAIC 202- POLYPROTEINVIRUS II 229 PPOLG_WNV GENOME WEST NILE 210- 3385-  POLYPROTEIN VIRUS254 3412 PPOLG_YEFV1 GENOME YELLOW FEVER 436- POLYPROTEIN VIRUS 463(STRAIN 17D) PPOLG_YETV2 GENOME YELLOW FEVER 436- POLYPROTEIN VIRUS 463(STRAIN PASTEUR 17D-204) PPOLG_ZYMV GENOME ZUCCHINI YELLOW MOSAIC  69-POLYPROTEIN VIRUS 96 PPOLH_POLIM GENOME POLIOVIRUS TYPE 1 1063-  1903- POLYPROTEIN (STRAIN MAHONEY) 1101 1933 PPOLN_EEVVT NONSTRUCTURALVENEZUELAN EQUINE 1402-  1894-  POLYPROTEIN ENCEPHALITIS 1467 1921 VIRUS(STRAIN TRINIDAD DONKEY) PPOLN_FCVC6 NON-STRUCTURAL FELINE CALICIVIRUS445- POLYPROTEIN (STRAIN CFI/68 F1V) 472 PPOLN_FCVF9 NON-STRUCTURALFELINE CALICIVIRUS 1034-  POLYPROTEIN (STRAIN K9) 1061 PPOLN_HEVBUNON-STRUCTURAL HEPATITIS E 219- 349- POLYPROTEIN VIRUS 246 376 (STRAINBURMA) PPOLN_HEVME NON-STRUCTURAL HEPATITIS E 219- 349- POLYPROTEINVIRUS 246 376 (STRAIN MEXICO) PPOLN_HEVMY N-STRUCTURAL HEPATITIS E 219-349- POLYPROTEIN VIRUS 246 376 (STRAIN MYANMAR) PPOLN_HEVPANON-STRUCTURAL HEPATITIS E 218- 348- POLYPROTEIN VIRUS 245 375 (STRAINPAKISTAN) PPOLN_MIDDV NONSTRUCTURAL MIDDELBURG 955- POLYPROTEIN VIRUS982 PPOLN_ONNVQ NONSTRUCTURAL O'NYONG-NYONG 2453-  POLYPROTEIN VIRUS2480 (STRAIN GULU) PPOLN_RHDV NON-STRUCTURAL RABBIT HEMORRHAGIC 313-1657-  POLYPROTEIN DISEASE 347 1684 VIRUS PPOLN_RRVN NONSTRUCTURAL ROSSRIVER 1037-  1477-  2418-  POLYPROTEIN VIRUS 1084 1504 2445 (STRAWNB5092) PPOLN_RRVT NONSTRUCTURAL ROSS RIVER 146- 1087-  POLYPROTEINVIRUS 173 1114 (STRAIN T48) PPOLN_RUBVT NONSTRUCTURAL RUBELLA 2060- POLYPROTEIN VIRUS 2087 (STRAIN THERIEN) PPOLN_SFV NONSTRUCTURAL SEMLIKIFOREST 1154-  POLYPROTEIN VIRUS 1181 PPOLN_SINDO NONSTRUCTURAL SINDBIS936- POLYPROTEIN VIRUS (SUBTYPE 970 OCKELBO/STRAIN EDSDYN 82-5)PPOLN_WEEV NONSTRUCTURAL WESTERN EQUINE  4- POLYPROTEIN VIRUS 31PPOLS_IBDV5 STRUCTURAL AVIAN INFECTIOUS 231- POLYPROTEIN BURSAL DISEASE258 VIRUS (STRAIN 52/70) PPOLS_IBDVA STRUCTURAL AVIAN INFECTIOUS 231-POLYPROTEIN BURSAL DISEASE 258 VIRUS (STRAIN AUSTRALIAN 002-73)PPOLS_IBDVC STRUCTURAL AVIAN INFECTIOUS 231- POLYPROTEIN BURSAL DISEASE258 VIRUS (STRAIN CU-1) PPOLS_IBDVE STRUCTURAL AVIAN INFECTIOUS 231-POLYPROTEIN BURSAL DISEASE 258 VIRUS (STRAIN E) PPOLS_IBDVP STRUCTURALAVIAN INFECTIOUS 212- POLYPROTEIN BURSAL DISEASE 239 VIRUS (STRAINPDG-98) PPOLS_IBDVS STRUCTURAL AVIAN INFECTIOUS 231- POLYPROTEIN BURSALDISEASE 258 VIRUS (STRAIN STC) PPOLS_ONNVG STRUCTURAL O'NYONG-NYONG 356-POLYPROTEIN VIRUS 383 (STRAIN GULU) PPOLS_RRVN STRUCTURAL ROSS RIVER939- POLYPROTEIN VIRUS 973 (STRAIN NB5092) PPOLS_RRVT STRUCTURAL ROSSRIVER 939- POLYPROTEIN VIRUS 973 (STRAIN T48) PPOLS_SINDO STRUCTURALSINDBIS 1138-  POLYPROTEIN VIRUS (SUBTYPE 1165 OCKELBO/STRAIN EDSDYN82-5) PPOLS_SINDV STRUCTURAL SINDBIS 1138-  POLYPROTEIN VIRUS 1165(STRAINS HRSP AND HRLP) PPOLS_WEEV STRUCTURAL WESTERN EQUINE 920-POLYPROTEIN ENCEPHALITIS 947 VIRUS PPOL_BAEVM POL POLYPROTEIN BABOONENDOGENOUS 675- 715- VIRUS 706 742 (STRAIN M7) PPOL_CAEVC POLPOLYPROTEIN CAPRINE ARTHRITIS 886- ENCEPHALITIS 924 VIRUS (STRAIN CORK)PPOL_COYMV PUTATIVE COMMELINA YELLOW 333- 838- 1075-  1178-  1313- POLYPROTEIN MOTTLE 360 865 1102 1205 1347 VIRUS PPOL_EIAV9 POLPOLYPROTEIN EQUINE INFECTIOUS 472- 826- ANEMIA VIRUS 505 853 (CLONE1369) PPOL_EIAVC POL POLYPROTEIN EQUINE INFECTIOUS 472- 826- ANEMIAVIRUS 505 853 (CLONE CL22) PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS471- 825- ANEMIA VIRUS 504 852 (ISOLATE WYOMING) PPOL_FENVI POLPOLYPROTEIN FELINE ENDOGENOUS 532- 627- VIRUS ECE1 599 654 PPOL_FIVPEPOL POLYPROTEIN FELINE IMMUNO- 442- DEFICIENCY 473 VIRUS (ISOLATEPETALUMA) PPOL_FMVD ENZYMATIC FIGWORT MOSAIC 403- POLYPROTEIN VIRUS 430(STRAIN DXS) PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA 535- 676-VIRUS 562 703 PPOL_HTL1A POL POLYPROTEIN HUMAN T-CELL LEUKEMIA 674-VIRUS TYPE 1 (STRAIN ATK) 712 PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELLLEUKEMIA 674- VIRUS TYPE 1 (CARIBBEAN 712 ISOLATE) PPOL_HVIA3 POLPOLYPROTEIN HUMAN IMMUNO- 218- 620- DEFICIENCY 245 663 VIRUS TYPE 1(ARV2/SF2 ISOLATE) PPOL_HVIB1 POL POLYPROTEIN HUMAN IMMUNO- 230- 637-DEFICIENCY 257 673 VIRUS TYPE 1 (BH10 ISOLATE) PPOL_HVIB5 POLPOLYPROTEIN HUMAN IMMUNO- 230- 632- DEFICIENCY 257 673 VIRUS TYPE 1 (BH5ISOLATE) PPOL_HVIBR POL POLYPROTEIN HUMAN IMMUNO- 230- 632- DEFICIENCY257 673 VIRUS TYPE 1 (BRU ISOLATE) PPOL_HVIEL POL POLYPROTEIN HUMANIMMUNO- 217- 624- DEFICIENCY 244 660 VIRUS TYPE 1 (ELI ISOLATE)PPOL_HVIH2 POL POLYPROTEIN HUMAN IMMUNO- 218- 620- 121- DEFICIENCY 245661 951 VIRUS TYPE 1 (HXB2 ISOLATE) PPOL_HVIJR POL POLYPROTEIN HUMANIMMUNO- 222- 624- DEFICIENCY 249 665 VIRUS TYPE 1 (JRCSF ISOLATE)PPOL_HVIMA POL POLYPROTEIN HUMAN IMMUNO- 217- 476- 619- DEFICIENCY 244510 660 VIRUS TYPE 1 (MAL ISOLATE) PPOL_HVIMN POL POLYPROTEIN HUMANIMMUNO- 221- 623- DEFICIENCY 248 664 VIRUS TYPE 1 (MN ISOLATE)PPOL_HVIN5 POL POLYPROTEIN HUMAN IMMUNO- 218- 625- DEFICIENCY 245 661VIRUS TYPE 1 (NEW YORK-5 ISOLATE) PPOL_HVIND POL POLYPROTEIN HUMANIMMUNO- 217- 624- DEFICIENCY 244 660 VIRUS TYPE 1 (NDK ISOLATE)PPOL_HVIOY POL POLYPROTEIN HUMAN IMMUNO- 218- 620- DEFICIENCY 245 661VIRUS TYPE 1 (OY1 ISOLATE) PPOL_HVIPV POL POLYPROTEIN HUMAN IMMUNO- 230-637- DEFICIENCY 257 673 VIRUS TYPE 1 (PV22 ISOLATE) PPOL_HVIRH POLPOLYPROTEIN HUMAN IMMUNO- 217- 619- DEFICIENCY 244 660 VIRUS TYPE 1(RF/HAT ISOLATE) PPOL_HVIU4 POL POLYPROTEIN HUMAN IMMUNO- 217- 513- 619-DEFICIENCY 244 540 660 VIRUS TYPE 1 (STRAIN UGANDAN/ISOLATE U PPOL_HVIZ2POL POLYPROTEIN HUMAN IMMUNO- 217- 619- DEFICIENCY 244 660 VIRUS TYPE 1(Z2/CDC-Z34 ISOLATE) PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNO- 491-DEFICIENCY 582 VIRUS TYPE 2 (ISOLATE BEN) PPOL_HV2CA POL POLYPROTEINHUMAN IMMUNO- 471- DEFICIENCY 562 VIRUS TYPE 2 (ISOLATE CAM2) PPOL_HV2D1POL POLYPROTEIN HUMAN IMMUNO- 509- DEFICIENCY 600 VIRUS TYPE 2 (ISOLATED194) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNO- 491- DEFICIENCY 568 VIRUSTYPE 2 (ISOLATE D205.7) PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNO- 471-DEFICIENCY 562 VIRUS TYPE 2 (ISOLATE GHANA-1) PPOL_HV2NZ POL POLYPROTEINHUMAN IMMUNO- 471- DEFICIENCY 529 VIRUS TYPE 2 (ISOLATE NIH-Z)PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNO- 472- DEFICIENCY 563 VIRUS TYPE2 (ISOLATE ROD) PPOL_HV2SB POL POLYPROTEIN HUMAN IMMUNO- 473- DEFICIENCY562 VIRUS TYPE 2 (ISOLATE SBLISY) PPOL_HV2ST POL POLYPROTEIN HUMANIMMUNO- 491- DEFICIENCY 582 VIRUS TYPE 2 (ISOLATE ST) PPOL_IPHA PUTATTVEPOL HAMSTER INTRACISTERNAL 200- 354- 461- POLYPROTEIN A-PARTICLE 227 381499 PPOL_IPMA PUTATIVE POL MOUSE INTRACISTERNAL 211- 302- 400-POLYPROTEIN A-PARTICLE 238 329 427 PPOL_IPMAI PROBABLE POL MOUSEINTRACISTERNAL 130- 221- POLYPROTEIN A-PARTICLE 157 248 PPOL_JSRV POLPOLYPROTEIN SHEEP PULMONARY 204- ADENOMATOSIS 231 VIRUS PPOL_MLVAK POLPOLYPROTEIN AKR MURINE 453- LEUKEMIA 480 VIRUS PPOL_MLVAV POLPOLYPROTEIN AKV MURINE 805- LEUKEMIA 832 VIRUS PPOL_MLVRD POLPOLYPROTEIN RADIATION MURINE 716- 805- LEUKEMIA 743 832 VIRUS PPOL_MLVRKPOL POLYPROTEIN RADIATION MURINE 101- 190- LEUKEMIA 128 217 VIRUS(STRAIN KAPLAN) PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER 574- 670-VIRUS 612 697 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS  67- 471- 873-(STRAIN SA-OMVV) 94 505 900 PPOL_RSVP POL POLYPROTEIN ROUS SARCOMA 757-VIRUS 824 (STRAIN PRAGUE C) PPOL_RTBV POLYPROTEIN RICE TUNGRO  7-  59-176- 202- 430-  447- 1022- BACILLIFORM 44 93 203 229 437 476 1049 VIRUSPPOL_RTBVP POLYPROTEIN RICE TUNGRO  7-  59- 176- 202- 410-  447- 1022-BACILLIFORM 44 93 203 229 437 476 1049 VIRUS (ISOLATE PHILIPPINES)PPOL_SFV1 POL POLYPROTEIN SIMIAN FOAMY 427- VIRUS 454 (TYPE 1)PPOL_SIVA1 POL POLYPROTEIN SIMIAN IMMUNO- 431- 547- 637- DEFICIENCY 458574 671 VIRUS (AGM155 ISOLATE) PPOL_SIVA2 POL POLYPROTEIN SIMIAN IMMUNO- 45- DEFICIENCY 72 VIRUS (AGM266 ISOLATE) PPOL_SIVA3 POL POLYPROTEINSIMIAN IMMUNO-  71- DEFICIENCY 98 VIRUS (AGM385 ISOLATE) PPOL_SIVAG POLPOLYPROTEIN SIMIAN IMMUNO- 436- 482- 642- DEFICIENCY 463 516 669 VIRUS(AGM3 ISOLATE) PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNO- 478- DEFICIENCY515 VIRUS (ISOLATE AGM/CLONE GRI-1) PPOL_SIVAT POL POLYPROTEIN SIMIANIMMUNO- 657- DEFICIENCY 691 VIRUS (TYO-1 ISOLATE) PPOL_SIVCZ POLPOLYPROTEIN CHIMPANZEE IMMUNO- 242- 626- DEFICIENCY 269 685 VIRUS(SIV(CPZ)) PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNO- 227- 636-DEFICIENCY 254 670 VIRUS (ISOLATE GB1) PPOL_SIVMI POL POLYPROTEIN SIMIANIMMUNO- 533- DEFICIENCY 560 VIRUS (MM142-83 ISOLATE) PPOL_SIVMK POLPOLYPROTEIN SIMIAN IMMUNO- 533- DEFICIENCY 560 VIRUS (K6W ISOLATE)PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNO- 496- DEFICIENCY 523 VIRUS(F236/SMH4 ISOLATE) PPOL_SIVSP POL POLYPROTEIN SIMIAN IMMUNO- 499-DEFICIENCY 526 VIRUS (PBJ/BC13 ISOLATE) PPOL_SMRVH POL POLYPROTEINSQUIRREL MONKEY 601- RETROVIRUS (SMRV-H) 628 PPOL_SOCMV ENZYMATICSOYBEAN CHLOROTIC MOTTLE 268- 348- POLYPROTEIN VIRUS 295 419 PPOL_SRV1POL POLYPROTEIN SIMIAN RETROVIRUS 578- 670- SRV-1 612 697 PPOL_VILV POLPOLYPROTEIN VISNA LENTIVIRUS 490- 881- (STRAIN 1514) 524 919 PPOL_VILV1POL POLYPROTEIN VISNA LENTIVIRUS  89- 490- 881- (STRAIN 1514/CLONE 116524 919 LV1-1KS1) PPOL_VILV2 POL POLYPROTEIN VISNA LENTIVIRUS 490- 881-(STRAIN 1514/CLONE 524 919 LV1-1KS2) PPR73_MMTVB PROTEIN PR73 MOUSEMAMMARY TUMOR 288- VIRUS (STRAIN BR6) 315 PPR73_MMTVC PROTEIN PR73 MOUSEMAMMARY TUMOR  45- VIRUS (STRAIN C3H) 79 PPR73_MMTVG PROTEIN PR73 MOUSEMAMMARY TUMOR 167- VIRUS (STRAIN OR) 201 PPYHD_CPVDM POLYHEDRIN BOMBYXMORI CYTOPLASMIC  37- PRECURSOR POLYHEDROSIS 71 VIRUS PPYHD_NPVACPOLYHEDRIN AUTOGRAPHA  13- CALIFORNICA 47 NUCLEAR POLYHEDROSIS VIRUSPPYHD_NPVAS POLYHEDRIN AGROTIS SEGETUM  14- 201- NUCLEAR 48 228POLYHEDROSIS VIRUS PPYHD_NPVBM POLYHEDRIN BOMBYX MORI  12- NUCLEAR 46POLYHEDROSIS VIRUS PPYHD_NPVBS POLYHEDRIN BUZURA SUPPRESSARIA  14-NUCLEAR 48 POLYHEDROSIS VIRUS PPYHD_NPVHC POLYHEDRIN HYPHANTRIA CUNEANUCLEAR  13- POLYHEDROSIS 40 VIRUS PPYHD_NPVLD POLYHEDRIN LYMANTRIADISPAR  14- MULTICAPSID NUCLEAR 48 POLYHEDROSIS VIRUS PPYHD_NPVMBPOLYHEDRIN MAMESTRA BRASSICAE  14- NUCLEAR 48 POLYHEDROSIS VIRUSPPYHD_NPVOP POLYHEDRIN ORGYIA PSEUDOTSUGATA  11- MULTICAPSID 47POLYHEDROSIS VIRUS PPYHD_NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA  14-SINGLE CAPSID NUCLEAR 48 POLYHEDROSIS VIRUS PPYHD_NPVPF POLYHEDRINPANOLIS FLAMMEA  14- MULTIPLE NUCLEOCAPSID 48 POLYHEDROSIS VIRUSPPYHD_NPVSE POLYHEDRIN SPODOPTERA EXIGUA NUCLEAR  14- POLYHEDROSIS 48VIRUS (STRAIN US) PPYHD_N7VSF POLYHEDRIN SPODOPTERA FRUGIPERDA  14-NUCLEAR 48 POLYHEDROSIS VIRUS PREV_SIVAT REV PROTEIN SIMIANIMMUNODEFICIENCY  41- VIRUS (TYO-1 ISOLATE) 68 PREV_VTLV REV PROTEINVISNA LENTIVIRUS  22- (STRAIN 1514) 62 PRIRI_ASFM2 RIBONUC-DIPHOSPHAFRICAN SWINE FEVER  7-  18- 363- REDUCT VIRUS (ISOLATE 41 119 390 LARGECHA MALAW1LIL 20/1) PRIRI_HCMVA RIBONUC-DIPHOSPH HUMAN 622- REDUCTCYTOMEGALOVIRUS 649 LARGE CHA (STRAIN AD169) PRIRI_HSVEBRIBONUC-DIPHOSPH EQUINE HERPESVIRUS TYPE 1  75- REDUCT LARGE CHA (STRAINAB4P) 102 PRIRI_HSVSA RIBONUC-DIPHOSPH HERPESVIRUS SAIMIRI 324- REDUCTLARGE CHA (STRAIN 11) 351 PRIRI_VACCC RIBONUC-DIPHOSPH VACCINIA 367-REDUCT VIRUS 401 LARGE CHA (STRAIN COPENHAGEN) PRIRI_VACCVRIBONUC-DIPHOSPH REDUCT VACCINIA 367- LARGE CHA VIRUS 401 (STRAIN WR)PRIRl_VARV RIBONUC-DIPHOSPH VARIOLA 367- REDUCT VIRUS 401 LARGE CHAPRIRI_VZVD RIBONUC-DIPHOSPH VARICELLA-ZOSTER 119- REDUCT VIRUS 146 LARGECHA (STRAIN DUMAS) PRIRI_HSVB3 RIBONUC-DIPHOSPH BOVINE HERPESVIRUS  90-REDUCT TYPE 1 (STRAIN 34) 117 SMALL CHA PRP94_VACCV RNA-POL-ASSOCVACCINIA    4l- 513- TRANS VIRUS 68 540 SPEC FACTOR (STRAIN WR)PRP94_VARV OM-POL-ASSOC VARIOLA  41-  77- 513- TRANS VIRUS 75 104 540SPEC FACTOR PRPO1_VACCC DNA-DIRECTED RNA VACCINIA 237- 587- 810- 961-POL 147 KD VIRUS 264 616 837 992 (STRAIN COPENHAGEN) PRPO1_VACCVDNA-DIRECTED RNA VACCINIA 237- 587- 810- 961- 1011-  POL 147 KD VIRUS264 616 837 992 1038 (STRAIN WR) PRPO1_VARV DNA-DIRECTED RNA VARIOLA237- 587- 810- 961- POL 147 KD VIRUS 264 616 837 992 PRPO2_CAPVKDNA-DIRECTED RNA CAPRIPOXVIRUS  19- 114- POL 132 KD (STRAIN KS-1) 65 155PRPO2_COWPX DNA-DIRECTED RNA COWPOX 211- 481- POL 132 KD VIRUS 241 509PRPO2_VACCV DMA-DIRECTED RNA VACCINIA 211- 481- POL 132 KD VIRUS 241 509(STRAIN WR) PRPO2_VARV DNA-DIRECTED RNA VARIOLA 211- 481- POL 132 KDVIRUS 241 509 PRPC4_CAPVK DNA-DIRECTED RNA CAPRIPOXVIRUS  36- POL 35 KD(STRAIN KS-1) 63 PRPO7_VACCV DNA-DIRECTED RNA VACCINIA  8-  43- POL 19KD VIRUS 35 70 (STRAIN WR) PRPO7_VARV DNA-DIRECTED RNA VARIOLA  43- POL19 KD VIRUS 70 PRPOA_LELV RNA-DIRECTED LELYSTAD 1533-  RNA POLYMERASEVIRUS 1560 PRPOL_EAV RNA-DIRECTED EQUINE ARTERITIS 888- 1639-  RNAPOLYMERASE VIRUS 915 1673 PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A 575-POL SUB P1 VIRUS 602 (STRAIN A/KOREA/426/68) PRRP2_IAANN RNA-DIRECTEDRNA INFLUENZA A 119- POL SUB P2 VIRUS 146 (STRAIN A/ANN ARBOR/6/60)PRRP2_IADH2 RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS 146(STRAIN A/DUCK/HOKKAIDO/8/80) PRRP2_IAFPR RNA-DIRECTED RNA INFLUENZA A119- POL SUB P2 VIRUS 146 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK/34)PRRP2_IAGU2 RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN146 A/GULL/ MARYLAND/704/77) PRRP2_IAHLO RNA-DIRECTED RNA INFLUENZA A119- POL SUB P2 VIRUS (STRAIN 146 A/EQUINE/ LONDON/1416/73) PRRP2_IAHTERNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146 A/EQUINE/TENNESSEE/5/86) PRRP2_IAKOR RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2VIRUS STRAIN 146 (A/KOREA/V426/68) PRRP2_IALE1 RNA-DIRECTED RNAINFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146 A/LENINGRAD/134/57)PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN146 A/LENINGRAD/134/17/57) PRRP2_IAMAN RNA-DIRECTED RNA INFLUENZA A 119-POL SUB P2 VIRUS (STRAIN 146 A/MALLARD/NEW YORK/ 6750/78) PRRP2_IANT6RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146A/NT/60/68) PRRP2_IAP10 RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2VIRUS (STRAIN 146 A/PINTAIL/ALBERTA/ 119/79) PRRP2_IAPUE RNA-DIRECTEDRNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146 A/PUERTO RICO/8/34)PRRP2_IARUD RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN146 A/RUDDY TURNSTONE/ NEW JERSEY/47/85) PRRP2_IASIN RNA-DIRECTED RNAINFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146 A/SINGAPORE/1/57)PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN146 A/TURKEY/MINNESOTA/ 833/80) PRRP2_IAV17 RNA-DIRECTED RNA INFLUENZA A119- 327- POL SUB P2 VIRUS (STRAIN 146 354 A/VICTORIA/3/75) PRRP2_IAWILRNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146A/WILSON-SMITH/33) PRRP2_IAZH2 RNA-DIRECTED RNA INFLUENZA A 119- POL SUBP2 VIRUS (STRAIN 146 A/SWINE/HONG KONG/ 81/78) PRRP2_IAZH3 RNA-DIRECTEDRNA INFLUENZA A 119- POL SUB P2 VIRUS (STRAIN 146 A/SWINE/HONG KONG/126/12) PRRP2_IAZH RNA-DIRECTED RNA INFLUENZA A 119- POL SUB P2 VIRUS(STRAIN 146 A/SWINE/IOWA/ 15/30) PRRP2_IAZTF RNA-DIRECTED RNA INFLUENZAA 119- POL SUB P2 VIRUS 146 (STRAIN A/SWINE/ TENNESSEE/26/77)PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA B 157- POL SUB P2 VIRUS (STRAIN194 B/ANN ARDOR/1/66 [COLD-ADAPTED]) PRRP2_INBAD RNA-DIRECTED RNAINFLUENZA B 164- POL SUB P2 VIRUS (STRAIN 194 B/ANN ARBOR/1/66[WILD-TYPE) PRRP2_INBSI RNA-DIRECTED RNA INFLUENZA B 157- POL SUB P3VIRUS (STRAIN 194 B/SINGAPORE/222/79) PRRP3_IABUD RNA-DIRECTED RNAINFLUENZA A 537- POL SUB P3 VIRUS (STRAIN 567 A/BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IACHI RNA-DIRECTED RNA INFLUENZA A 331- POL SUB P3VIRUS (STRAIN 358 A/CHILE/1/83) PRRP3_IAHPR RNA-DIRECTED RNA INFLUENZA A331- 410- POL SUB P3 VIRUS (STRAIN 361 507 A/EQUINE/PRAGUE/1/56)PRRP3_IAZTE RNA-DIRECTED RNA INFLUENZA A 487- POL SUB P3 VIRUS (STRAIN514 A/SWINE/TENNESSEE/ 24/77) PRRP3_INBAC RNA-DIRECTED RNA INFLUENZA B 2- 472- POL SUB P3 VIRUS (STRAIN 33 509 B/ANN ARBOR/1/66[COLD-ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNA INFLUENZA B  2- 472- POLSUB P3 VIRUS (STRAIN 33 509 B/ANN ARBOR/1/66 [WILD-TYPE) PRRP3_INCBERNA-DIRECTED RNA INFLUENZA C 509- POL SUB P3 VIRUS (STRAIN 536C/BERLIN/1/85) PRRP3_INCJJ RNA-DIRECTED RNA INFLUENZA C 509- POL SUB P3VIRUS 536 (STRAIN C/11/50) PRRP3_THOGV RNA-DIRECTED RNA THOGOTO 149-358- POL SUB P3 VIRUS 176 385 PRRPA_CVHJJ RNA HUMAN CORONA 516- 724-1971-  3781-  POLYMERASE VIRUS 543 751 2008 3811 (STRAIN 229E)PRRPA_CVM22 RNA-DIRECTED RNA MURINE CORONA 624- 4326-  POLYMERASE VIRUSMHV 651 4353 (STRAIN JHM) PRRPB_BEV RNA-DIRECTED RNA BERNE  27- 557-943- POLYMERASE VIRUS 54 584 984 PRRPB_CVMAS RNA-DIRECTED RNA MURINECORONAVIRUS MHV 885- 1129-  POLYMERASE (STRAIN A59) 915 1170 PRRPB_CVMJHRNA-DIRECTED RNA MURINE CORONAVIRUS MHV 885- 1129-  POLYMERASE (STRAINJHM) 915 1170 PRRPB_CVPFS RNA-DIRECTED RNA PORCINE TRANSMISSIBLE  20-353- 385- POLYMERASE GASTROENTERITIS 47 380 412 CORONAVIRUS (STRAINFS772 PRRPB_IBVB RNA-DIRECTED RNA AVIAN INFECTIOUS 1510-  2296-  2547- POLYMERASE BRONCHITIS 1547 2331 2574 VIRUS (STRAIN BEAUDETTE) PRRPB_IBVKRNA-DIRECTED RNA AVIAN INFECTIOUS 165- 416- POLYMERASE BRONCHITIS 200443 VIRUS (STRAIN KB8523) PRRPL_BTV10 RNA-DIRECTED RNA BLUETONGUE 1032- POLYMERASE VIRUS 1059 (SEROTYPE 10/ISOLATE USA) PRRPL_BUNYW RNAPOLYMERASE BUNYAMWERA  80- 317- 1802-  1892-  VIRUS 114 350 1861 1919PRRPL_CDVO RNA POLYMERASE CANINE DISTEMPER  24- BETA SUBUNIT VIRUS 51(STRAIN ONDERSTEPOORT) PRRPL_HANTV RNA POLYMERASE HANTAAN 404- 461- 564-738- 905- 1993- VIRUS 433 510 591 765 946 2020 (STRAIN 76-118)PRRPL_KRSVA RNA POLYMERASE HUMAN RESPIRATORY 103- 210- 667- 788- 1007- 1138- 1453- 1776- 2062- BETA SUBUNIT SYNCYTIAL 192 237 694 815 1034 11651480 1803 2089 VIRUS (STRAIN A2) PRRPL_MABVM RNA-DIRECTED RNA MARBURG991- 1143-  1490-  1811-  2029-  2216- POLYMERASE VIRUS 1018 1170 15241838 2067 2266 (STRAIN MUSOKE) PRRPL_MABVP RNA-DIRECTED RNA MARBURG 991-1490-  2239-  POLYMERASE VIRUS 1018 1524 2267 (STRAIN POPP) PRRPL_MEASERNA POLYMERASE MEASLES  95- 196- 2121-  BETA SUBUNIT VIRUS 122 223 2148(STRAIN EDMONSTON) PRRPL_MUMPM RNA POLYMERASE MUMPS 111- 780- 1602- BETA SUBUNIT VIRUS (STRAIN 142 807 1632 MIYAHARA VACCINE) PRRPL_NDVB RNAPOLYMERASE NEWCASTLE DISEASE 250- 477- 1979-  BETA SUBUNIT VIRUS 284 5042013 (STRAIN BEAUDETTE C/45) PRRPL_PI2HT RNA POLYMERASE HUMANPARAINFLUENZA 2 322- 1564-  1687-  1901-  BETA SUBUNIT VIRUS (STRAINTOSHIBA) 349 1598 1721 1946 PRRPL_PI3H4 RNA POLYMERASE HUMANPARAINFLUENZA 3  52- 136- 608- 1081-  1994-  2115- BETA SUBUNIT VIRUS(STRAIN NIH 47885) 86 163 638 1123 2036 2142 PRRPL_PUUMH RNA-DIRECTEDRNA PUUMALA 388- 557- 731- 864- 926- 1940- 1998- POLYMERASE VIRUS(STRAIN 415 591 758 891 953 1971 2025 HALLNAS B1) PRRPL_RABVP RNAPOLYMERASE RABIES 204- 605- 2068-  BETA SUBUNIT VIRUS (STRAIN PV) 231632 2123 PRRPL_RABVS RNA POLYMERASE RABIES 204- 605- 2068-  BETA SUBUNITVIRUS 231 632 2123 (STRAIN SAD B19) PRRPL_RDV RNA-DIRECTED RNA RICEDWARF 855- POLYMERASE VIRUS 882 PRRPL_RVFVZ RNA-DIRECTED RNA RIFT VALLEYFEVER 1536-  1653-  POLYMERASE VIRUS 1563 1687 (STRAIN ZH-548 M12)PRRPL_SEND5 RNA POLYMERASE SENDAI 629- 1082-  1729-  2145-  BETA SUBUNITVIRUS (STRAIN 656 1116 1756 2180 Z/HOST MUTANTS) PRRPL_SENDE RNAPOLYMERASE SENDAI 449- 902- 1549-  1965-  BETA SUBUNIT VIRUS (STRAIN 476936 1576 2000 ENDERS) PRRPL_SENDZ RNA POLYMERASE SENDAI 629- 1082- 1729-  2145-  BETA SUBUNIT VIRUS (STRAIN Z) 656 1116 1756 2180PRRPL_SEOU8 RNA-DIRECTED RNA SEOUL 461- 564- 731- 905- POLYMERASE VIRUS488 591 758 932 (STRAIN 10-39) PRRPL_SV5WR RNA POLYMERASE SIMIAN 1096- 1250-  1680-  2120-  BETA SUBUNIT VIRUS 5 1123 1277 1710 2147 (STRAIN21004-WR) PRRPL_SYNV RNA POLYMERASE SONCHUS YELLOW NET 825- 1092- 1490-  1973-  2080-  BETA SUBUNIT VIRUS 859 1119 1520 2000 2107PRRPL_TSWVB RNA-DIRECTED RNA TOMATO SPOTTED WILT 477- 542- 1119-  1195- 1330-  1415- 1671- 1857- 2083- POLYMERASE VIRUS (BRAZILIAN ISOLATE 504573 1150 1229 1357 1442 1698 1884 2110 CPNH1/BR-01) 2166-  2324-  2771- 2193 2368 2798 PRRPL_UUK RNA POLYMERASE UUKUNIEMI 142- 1037-  1304- VIRUS 187 1071 1331 PRRPL_VSVJH RNA POLYMERASE VESICULAR STOMATITIS1530-  1809-  BETA SUBUNIT VIRUS(SEROTYPE NEW 1557 1836 JERSEY/STRAINHAZELHU PRRPL_VSVJO RNA POLYMERASE VESICULAR STOMATITIS 1205-  1109- BETA SUBUNIT VIRUS (SEROTYPE 1232 1836 NEW JERSEY/STRAIN OGDEN)PRRPL_VSVSJ RNA POLYMERASE VESICULAR STOMATITIS 1540-  1768-  BETASUBUNIT VIRUS 1567 1798 (STRAIN SAN JUAN) PRRPO_ACLSV RNA-DIRECTED RNAAPPLE CHLOROTIC 228- 564- POLYMERASE LEAF SPOT 264 591 VIRUS PRRPO_BWYVFPUTATIVE RNA-DIR BEET WESTERN YELLOWS 356- RNA POL VIRUS (ISOLATE FL-1)383 PRRPO_BYDVI PUTATIVE RNA-DIR BARLEY YELLOW DWARF 772- RNA POL VIRUS(ISOLATE MAV-PS1) 799 PRRPO_BYDVP PUTATIVE RNA-DIR BARLEY YELLOW DWARF772- RNA POL VIRUS (ISOLATE PAV) 799 PRRPO_BYDVR PUTATIVE RNA-DIR BARLEYYELLOW DWARF 772- RNA POL VIRUS 799 (ISOLATE P-PAV) PRRPO_CARMV PUTATIVERNA-DIR CARNATION MOTTLE  93- 277- 667- RNA POL VIRUS 127 304 694PRRPO_CGMVS PUTATIVE RNA-DIR CUCUMBER GREEN MOTTLE 387- 1040-  RNA POLMOSAIC 414 1067 VIRUS (WATERMELON STRAIN SH) PRRPO_IBDV5 PUTATIVERNA-DIR AVIAN INFECTIOUS BURSAL 336- 392- RNA POL DISEASE VIRUS 363 419(STRAIN 52/70) PRRPO_IBDVA PUTATIVE RNA-DIR AVIAN INFECTIOUS BURSAL 661-717- RNA POL DISEASE VIRUS (STRAIN 688 744 AUSTRALIAN 002-73)PRRPO_IPNVJ PUTATIVE RNA-DIR INFECTIOUS PANCREATIC 773- RNA POL NECROSIS800 VIRUS (SEROTYPE JASPER) PRRPO_IPNVS PUTATIVE RNA-DIR INFECTIOUSPANCREATIC 773- RNA POL NECROSIS VIRUS 800 (SEROTYPE SP) PRRPO_LYCVA RNAPOLYMERASE LYMPHOCYTIC 834- 1052-  CHORIOMENINGITIS 886 1079 VIRUS(STRAIN ARMSTRONG) PRRPO_PPMVS PUTATIVE RNA-DIR PEPPER MILD MOTTLE 402-709- 1072-  RNA POL VIRUS (STRAIN SPAIN) 429 736 1099 PRRPO_REOVDRNA-DIRECTED RNA REOVIRUS (TYPE 3/STRAIN  61- POLYMERASE DEARING) 88PRRPO_REOVL RNA-DIRECTED RNA REOVIRUS  61- POLYMERASE (TYPE 1/STRAINLANG) 88 PRRPO_ROTBR RNA-DIR RNA POL BOVINE ROTAVIRUS  68- 218- 791-SUBUNIT VP1 (STRAIN RF) 95 245 818 PRRPO_ROTBU RNA-DIR RNA POL BOVINEROTAVIRUS  65- 218- 791- 975- SUBUNIT VP1 (STRAIN UK) 95 245 841 1002PRRPO_ROTPC RNA-DIR RNA POL PORCINE ROTAVIRUS  3-  75- 363- 543- SUBUNITVP1 (GROUP C/STRAIN COWDEN) 44 102 390 585 PRRPO_ROTPG RNA-DIR RNA POLPORCINE ROTAVIRUS  65- 102- 791- 973- SUBUNIT VP1 (STRAIN GOTTFRIED 95129 839 1002 PRRPO_ROTS1 RNA-DIR RNA POL SIMIAN 11 ROTAVIRUS  65- 791-975- SUBUNIT VP1 (STRAIN SA11) 95 839 1002 PRRPO_SCVLA RNA-DIRECTED RNASACCHAROMYCES CEREVISIAE 147- POLYMERASE 188 VIRUS L-A PRRPO_TACV RNAPOLYMERASE TACARIBE 163- 241- 1107-  1978-  VIRUS 204 271 1134 2008PRRPO_TMGMV PUTATIVE RNA-DIR TOBACCO MILD GREEN 230- 1316-  1397-  RNAPOL MOSAIC VIRUS 257 1343 1424 (TMV STRAIN U2) PRRPP_BRSVA RNAPOLYMERASE BOVINE RESPIRATORY  99- ALPHA SUBUNIT SYNCYTIAL-VIRUS 133(STRAIN A51908) PRRPP_CDVO RNA POLYMERASE CANINE DISTEMPER 315- ALPHASUBUNIT VIRUS (STRAIN 370 ONDERSTEPOORT) PRRPP_HRSV RNA POLYMERASE HUMANRESPIRATORY  99- ALPHA SUBUNIT SYNCYTIAL 141 VIRUS PRRPP_MRSVI RNAPOLYMERASE HUMAN RESPIRATORY  99- ALPHA SUBUNIT SYNCYTIAL VIRUS 141(SUBGROUP B/ STRAIN 18537) PRRPP_HRSVA RNA POLYMERASE HUMAN RESPIRATORY 99- ALPHA SUBUNIT SYNCYTIAL VIRUS 141 (STRAIN A2) PRRPP_HRSVL RNAPOLYMERASE HUMAN RESPIRATORY  99- ALPHA SUBUNIT SYNCYTIAL VIRUS 141(SUBGROUP A/STRAIN LONG) PRRPP_MEASE RNA POLYMERASE MEASLES 315- ALPHASUBUNIT VIRUS (STRAIN 370 EDMONSTON) PRRPP_MEASI RNA POLYMERASE MEASLES315- ALPHA SUBUNIT VIRUS (STRAIN 370 IP-3-CA) PRRPP_MEASY RNA POLYMERASEMEASLES 315- ALPHA SUBUNIT VIRUS (STRAIN 370 YAMAGATA-1) PRRPP_PI1HB RNAPOLYMERASE HUMAN PARAINFLUENZA 1  84- 234- 375- ALPHA SUBUNIT VIRUS(STRAIN C35) 111 261 416 PRRPP_PI1HC RNA POLYMERASE HUMAN PARAINFLUENZA1  84- 234- 375- ALPHA SUBUNIT VIRUS (STRAIN C39) 111 261 416PRRPP_PI1HD SNA POLYMERASE HUMAN PARAINFLUENZA 1  84- 232- 375- ALPHASUBUNIT VIRUS (STRAIN C1-5/73) 111 262 416 PRRPP_PI1HE RNA POLYMERASEHUMAN PARAINFLUENZA 1  84- 244- 375- ALPHA SUBUNIT VIRUS (STRAINC1-14/83) 111 271 416 PRRPP_PI1H RNA POLYMERASE HUMAN PARAINFLUENZA 2167- 222- ALPHA SUBUNIT VIRUS 194 256 PRRPP_PI2HT RNA POLYMERASE HUMANPARAINFLUENZA 2 167- 222- ALPHA SUBUNIT VIRUS (STRAIN TOSHIBA) 194 256PRRPP_PI3B RNA POLYMERASE BOVINE PARAINFLUENZA 3  34- 255- 285- ALPHASUBUNIT VIRUS 91 282 314 PRRPP_PI3H4 RNA POLYMERASE HUMAN PARAINFLUENZA3 114- 269- ALPHA SUBUNIT VIRUS (STRAIN NIH 47885) 144 299 PRRPP_PI4HARNA POLYMERASE HUMAN PARAINFLUENZA 4A  4- ALPHA SUBUNIT VIRUS (STRAINTOSHIBA) 38 PRRPP_RABVP RNA POLYMERASE RABIES  93- ALPHA SUBUNIT VIRUS(STRAIN PV) 127 PRRPP_SEND5 RNA POLYMERASE SENDAI 330- 379- ALPHASUBUNIT VIRUS (STRAIN 357 420 Z/HOST MUTANTS) PRRPP_SEND6 RNA POLYMERASESENDAI 330- 379- ALPHA SUBUNIT VIRUS (STRAIN 357 420 6/94) PRRPP_SENDFRNA POLYMERASE SENDAI 330- 379- ALPHA SUBUNIT VIRUS (STRAIN 357 420FUSH1MI) PRRPP_SENDH RNA POLYMERASE SENDAI 330- 379- ALPHA SUBUNIT VIRUS(STRAIN 357 420 HARRIS) PRRPP_SENDZ RNA POLYMERASE SENDAI 330- 379-ALPHA SUBUNIT VIRUS (STRAIN Z) 357 420 PRRPP_SV5 RNA POLYMERASE SIMIAN205- 236- ALPHA SUBUNIT VIRUS 5 232 263 (STRAIN W3) PSODC_VACCVSUPEROXIDE VACCINIA  72- DISMUTASE VIRUS 99 LIKE PROTEIN (STRAIN WR)PSODC_VARV SUPEROXIDE VARIOLA  72- DISMUTASE VIRUS 99 LIKE PROTEINPSPHR_AMEPV SPHEROIDIN AMSACTA MOOREI  91-  40- 227- 361- ENTOMOPOXVIRUS118 167 261 390 PSPI1_MYXVL SERPIN 1 MYXOMA 286- VIRUS 313 (STRAINLAUSANNE) PSPI2_VACCV SERINE PROTEINASE VACCINIA  59- INHIBITOR 2 VIRUS86 (STRAIN WR) PSPIA_VACCC SERINE PROTEASE VACCINIA  18- INH 2 HOMOLOGVIRUS 65 (STRAIN COPENHAGEN) PT2C2_CHVPI TYPE II PARAMECIUM BURSARIA 16- RESTRICTION CHLORELLA 43 ENZYME CVIAII VIRUS 1 PTAA2_VACCVTRANS-ACTIVATOR VACCINIA  95- PROTEIN A2 VIRUS 133 PTAG8_FOWPVTRANS-ACTIVATOR FOWLPOX  3- PROTEIN FP0 VIRUS 51 PTAG8_VACCVTRANS-ACTIVATOR VACCINIA  3- PROTEIN GK1 VIRUS 30 PTAG8_VARVTRANS-ACTIVATOR VARIOLA  3- PROTEIN GK1 VIRUS 30 PTALA_BFDV LARGE TANTIGEN BUDGERIGAR FLEDGLING 291- DISEASE 318 VIRUS PTALA_POVBO LARGE TANTIGEN BOVINE POLYOMA 502- VIRUS 537 PTALA_POVHA LARGE T ANTIGENHAMSTER POLYOMAVIRUS 587- 621 PTALA_POVLY LARGE T ANTIGEN LYMPHOTROPIC224- 616- POLYOMAVIRUS 258 684 PTALA_POVM3 LARGE T ANTIGEN MOUSEPOLYOMAVIRUS 513- (STRAIN 3) 540 PTALA_POVMA LARGE T ANTIGEN MOUSEPOLYOMAVIRUS 511- (STRAIN A2) 538 PTALA_POVMC LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN 508- CRAWFORD SMALL-PLAQUE) 535 PTATR_NPVACTRANS-ACT TRANS AUTOGRAPHA 407- 489- 532- REG PROTEIN CALIFORNICA 434523 559 NUCLEAR POLYHEDROSIS VIRUS PTATR_NPVBM TRANS-ACT TRANS BOMBYXMORI NUCLEAR 412- 494- 537- REG PROTEIN POLYHEDROSIS 439 528 564 VIRUSPTATR_NPVOP TRANS-ACT TRANS ORGYIA PSEUDOTSUGATA 512- REG PROTEINMULTICAPSID 554 POLYHEDROSIS VIRUS PTEGU_EBV LARGE TEGUMENT EPSTEIN-BARR145- 1215-  1344-  1876-  PROTEIN VIRUS 172 1242 1371 1903 (STRAINB95-8) PTEGU_HCMVA PROBABLE LARGE HUMAN 1251-  2202-  TEGUMENT PROTEINCYTOMEGALOVIRUS 1281 2229 (STRAIN AD169) PTEGU_HSV11 LARGE TEGUMENTHERPES SIMPLEX 667- 1673-  PROTEIN VIRUS 694 1710 (TYPE 1/STRAIN 17)PTEGU_HSV6G LARGE TEGUMENT HERPES SIMPLEX 102- 228- 567- 962- 1098- 1661- 1884- PROTEIN VIRUS 129 262 611 993 1181 1688 1911 (TYPE 6/STRAINGS) PTEGU_HSVEB LARGE TEGUMENT EQUINE HERPESVIRUS 229- 566- 1205- PROTEIN TYPE 1 (STRAIN AB4P) 256 591 1232 PTEGU_HSVSA PROBABLE LARGEHERPESVIRUS SAIMIRI 524- 672- 777- 846- 949-  990- 1467- 2102- TEGUMENTPROTEIN (STRAIN 11) 607 700 814 898 986 1017 1497 2135 PTEGU_VZVD LARGETEGUMENT VARICELLA-ZOSTER 1121-  1579-  PROTEIN VIRUS 1158 1609 (STRAINDUMAS) PTERM_ADE07 DNA TERMINAL HUMAN ADENOVIRUS 375- PROTEIN TYPE 7 413PTMAF_AVIS4 TRANSFORMING AVIAN 302- PROTEIN MAF MUSCULOAPONEUROTIC 336FIBROSARCOMA VIRUS A542 PTOP1_SFVKA DNA SHOPE FIBROMA  38- 132-TOPOISOMERASE 1 VIRUS 65 176 (STRAIN KASZA) PTOP1_VACCV DNA VACCINIA 38- TOPOISOMERASE 1 VIRUS 65 PTOP1_VARV DNA VARIOLA  38- TOPOISOMERASE1 VIRUS 65 PTOP2_ASFM2 DNA AFRICAN SWINE FEVER 902- TOPOISOMERASE IIVIRUS (ISOLATE 936 MALAWI LIL 20/1) PTYSY_HSVAT THYMIDYLATE HERPES 116-SYNTHASE VIRUS ATELES 143 PTYSY_HSVSA THYMIDYLATE HERPESVIRUS SAIMIRI120- SYNTHASE (STRAIN II) 147 PUL06_EBV VIRION PROTEIN EPSTEIN-BARR 115-313- 542- BBRF1 VIRUS 142 340 569 (STRAIN B95-8) PUL06_HSV11 VIRIONPROTEIN HERPES SIMPLEX 586- UL6 VIRUS 613 (TYPE 1 (STRAIN 17)PUL06_HSVEB VIRION GENE 56 EQUINE HERPESVIRUS TYPE 640- 1/STRAIN AB4P)667 PUL06_HSVSA VIRION GENE 43 HERPESVIRUS SAIMIRI  15- 302- 368-PROTEIN (STRAIN 11) 42 358 402 PUL08_HCMVA HYPOTHETICAL HUMAN  6-PROTEIN UL8 CYTOMEGALOVIRUS 47 (STRAIN AD169) PUL11_EBV HYPOTHETICALEPSTEIN-BARR  15- PROTEIN BBLF1 VIRUS 42 (STRAIN B95-8) PUL13_HCMVAHYPOTHETICAL HUMAN 347- PROTEIN UL13 CYTOMEGALOVIRUS 374 (STRAIN AD169)PUL14_HSVEB HYPOTHETICAL GENE EQUINE HERPESVIRUS 247- 41 PROTEIN TYPE 1(STRAIN AB4P) 286 PUL14_VZVD HYPOTHETICAL GENE VARICELLA-ZOSTER  64- 46PROTEIN VIRUS (STRAIN DUMAS) 101 PUL16_HCMVA HYPOTHETICAL HUMAN  81-PROTEIN UL16 CYTOMEGALOVIRUS 112 (STRAIN AD169) PUL20_HCMVA HYPOTH PROUL20 HUMAN  34- PRECURSOR CYTOMEGALOVIRUS 61 (STRAIN AD169) PUL21_HSVEBGENE 40 PROTEIN EQUINE HERPESVIRUS  44- TYPE 1 (STRAIN AB4P) 71PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER 380–407 VIRUS (STRAIN DUMAS)PUL25_HSVSA VIRION GENE 19 HERPESVIRUS SAIMIRI  34- 204- 362- PROTEIN(STRAIN 11) 61 231 389 PUL31_HCMVA HYPOTHETICAL HUMAN 167- 254- PROTEINUL31 CYTOMEGALOVIRUS 194 284 (STRAIN AD169) PUL32_HSVEB MAJOR ENVELOPEEQUINE HERPESVIRUS 345- GLYCO- TYPE 1 375 PROTEIN 300 PUL34_HSV11 VIRIONHERPES SIMPLEX 116- PROTEIN UL34 VIRUS 143 (TYPE 1/STRAIN 17)PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI 208- (STRAIN 11) 235PUL34_VZVD VIRION GENE 2 VARICELLA-ZOSTER 112- 4 PROTEIN VIRUS 139(STRAIN DUMAS) PUL35_HCMVA HYPOTHETICAL HUMAN 535- PROTEIN UL35CYTOMEGALOVIRUS 562 (STRAIN AD169) PUL37_HSV11 PROTEIN UL37 HERPESSIMPLEX 470- 853- VIRUS 497 884 (TYPE 1/STRAIN 17) PUL37_HSVEB GENE 23PROTEIN EQUINE HERPESVIRUS 715- 987- TYPE 1 (STRAIN AB4P) 749 1014PUL37_HSVSA GENE 63 PROTEIN HERPES  31- 685- VIRUS SAIMIRI 65 737(STRAIN 11) PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER 107- 485- 719-976- VIRUS 134 512 746 1003 (STRAIN DUMAS) PUL41_VZVD HOST SHUTOFFVARICELLA-ZOSTER 330- VIRION PROTEIN VIRUS 364 (STRAIN DUMAS)PUL42_HSV11 DNA-BINDING HERPES SIMPLEX 231- PROTEIN UL42 VIRUS 258 (TYPE1/STRAIN 17) PUL43_VZVD GENE 15 MEMBRANE VARICELLA-ZOSTER 129- 312-PROTEIN VIRUS 156 349 (STRAIN DUMAS) PUL47_HCMVA PROTEIN UL47 HUMAN 114-448- 761- 802- CYTOMEGALOVIRUS 148 485 790 853 (STRAIN AD169)PUL47_HSV11 VIRION PROTEIN HERPES SIMPLEX 488- UL47 VIRUS 515 (TYPE1/STRAIN 17) PUL47_HSVIF VIRION PROTEIN HERPES SIMPLEX 488- UL47 VIRUS515 (TYPE 1/STRAIN F) PUL47_HSVE4 97 KD ALPHA EQUINE HERPESVIRUS 190-TRANS- TYPE 4 217 INDUCING PROTEIN PUL50_HCMVA PROTEIN UL50 HUMAN 159-CYTOMEGALOVIRUS 186 (STRAIN AD169) PUL52_EBV PROS DNA EPSTEIN-BARR 185-787- REPLICATION VIRUS 212 814 PROTEIN BSLF1 (STRAIN B95-8) PUL52_HSVEDDNA REPLICATION EQUINE HERPESVIRUS 193- 943- PROTEIN UL52 TYPE 1 (STRAINAB4P) 220 970 PUL52_HSVSA PROS DNA REP HERPESVIRUS SAIMIRI 130- GENE 56PROTEIN (STRAIN 11) 157 PUL52_VZVD PROS DNA REP VARICELLA-ZOSTER 301-GENE 6 PROTEIN VIRUS 337 (STRAIN DUMAS) PUL59_HCMVA HYPOTHETICAL HUMAN 74- PROTEIN UL59 CYTOMEGALOVIRUS 101 (STRAIN AD169) PUL70_HCMVA PROSDNA REP HUMAN  65- PROTEIN UL70 CYTOMEGALOVIRUS 92 (STRAIN AD169)PUL73_HCMVA UL73 GLYCO- HUMAN  5- PROTEIN CYTOMEGALOVIRUS 73 PRECURSOR(STRAIN AD169) PUL73_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI  9- GENE 53PROTEIN (STRAIN 11) 36 PUL74_HCMVA HYPOTHETICAL HUMAN  45- PROTEIN UL74CYTOMEGALOVIRUS 79 (STRAIN AD169) PUL87_EBV HYPOTHETICAL EPSTEIN-BARR409- PROTEIN B(C)RF1 VIRUS 436 (STRAIN B95-8) PUL87_HSV6U HYPOTHETICALHERPES SIMPLEX 536- 729- PROTEIN 5R VIRUS 563 768 (TYPE 6/STRAINUGANDA-1102) PUL87_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI 582- GENE 24PROTEIN (STRAIN 11) 609 PUL92_EBV HYPOTHETICAL EPSTEIN-BARR 107- 168-PROTEIN BDLF4 VIRUS 144 196 (STRAIN B95-8) PUL92_HSVSA HYPOTHETICALHERPESVIRUS SAIMIRI  92- GENE 31 PROTEIN (STRAIN 11) 122 PUL93_HCMVAPROTEIN UL93 HUMAN  26- 314- CYTOMEGALOVIRUS 53 381 (STRAIN AD169)PUL95_HCMVA HYPOTHETICAL HUMAN  37- PROTEIN UL95 CYTOMEGALOVIRUS 71(STRAIN AD169) PUL95_HSV6U HYPOTHETICAL HERPES SIMPLEX  73- 105- PROTEIN13R VIRUS 100 134 (TYPE 6/STRAIN UGANDA-1102) PULA4_HCMVA VIRION HUMAN 4- 443- PROTEIN UL104 CYTOMEGALOVIRUS 31 477 (STRAIN AD169) PULB9_HCMVAHYPOTHETICAL HUMAN  33- PROTEIN UL119 CYTOMEGALOVIRUS 78 (STRAIN AD169)PULD0_HCMVA HYPOTHETICAL HUMAN  90- PROTEIN UL130 CYTOMEGALOVIRUS 124(STRAIN AD169) PUNG_HSVSA URACIL-DNA HERPESVIRUS SAIMIRI 135-GLYCOSYLASE (STRAIN 11) 176 PUNG_SFVKA URACIL-DNA SHOPE FIBROMA  81-GLYCOSYLASE VIRUS 115 (STRAIN KASZA) PUNG_VACCC URACIL-DNA VACCINIA  85-129- GLYCOSYLASE VIRUS 116 156 (STRAIN COPENHAGEN) PUNG_VACCV URACIL-DNAVACCINIA  85- 129- GLYCOSYLASE VIRUS 116 156 (STRAIN WR) PUNG_VARVURACIL-DNA VARIOLA  85- GLYCOSYLASE VIRUS 116 PUS09_HCMVA HYPOTHETICALHUMAN  20- PROTEIN HXLF3 CYTOMEGALOVIRUS 47 (STRAIN AD169) PUS14_HCMVAHYPOTHETICAL HUMAN 277- PROTEIN HVLF4 CYTOMEGALOVIRUS 308 (STRAIN AD169)PUS18_HCMVA MEMBRANE HUMAN 191- PROTEIN HWLFS CYTOMEGALOVIRUS 218(STRAIN AD169) PV121_ASFL5 LIS 121-1 AFRICAN SWINE FEVER  2- PROTEINVIRUS (STRAIN L1557) 29 PV125_AMVLE 125 KD ALFALFA MOSAIC 702- PROTEINVIRUS 729 (STRAIN 425/ISOLATE LEIDEN) PV137_ASFL5 LIS 137 PROTEINAFRICAN SWINE FEVER  2- VIRUS 29 (STRAIN L1557) PV13K_TRVPL 16 KDTOBACCO RATTLE  59- PROTEIN VIRUS 86 (STRAIN PLB) PV143_NPVAC HELICASEAUTOGRAPHA 496- 945- CALIFORNICA 560 972 NUCLEAR POLYHEDROSIS VIRUSPV16K_TRVPS 16 KD TOBACCO RATTLE  79- PROTEIN VIRUS 113 (STRAIN PSG)PV1A_BBMV 1A PROTEIN BROAD BEAN MOTTLE  23- 710- 840- VIRUS 54 737 868PV1A_BMV 1A PROTEIN BROME MOSAIC  22- 384- 836- 892- VIRUS 58 411 863919 PV1A_CCMV 1A PROTEIN COWPEA CHLOROTIC 249- MOTTLE VIRUS 276PV1A_CMVFN 1A PROTEIN CUCUMBER MOSAIC  11- VIRUS 38 (STRAIN FNY)PV1A_CMVO 1A PROTEIN CUCUMBER MOSAIC  11- 864- VIRUS 38 902 (STRAIN O)PV1A_CMVQ 1A PROTEIN CUCUMBER MOSAIC  11- VIRUS 38 (STRAIN Q) PV1A_PSVJ1A PROTEIN PEANUT STUNT  4- 372- VIRUS 38 399 (STRAIN J) PV1A_TAV 1APROTEIN TOMATO ASPERMY  11- 271- 376- 857- VIRUS 38 298 403 884PV25K_NPVAC 25 KD AUTOGRAPHA  4- PROTEIN CALIFORNICA 31 NUCLEARPOLYHEDROSIS VIRUS PV29K_PEBV 29.6 KD PEA EARLY BROWNING 140- PROTEINVIRUS 170 PV29K_TRVSY 29 KD TOBACCO RATTLE 170- PROTEIN VIRUS 197PV29K_TRVTC 29 KD TOBACCO RATTLE  48- PROTEIN VIRUS 75 (STRAIN TCM)PV2A_DDMV 2A PROTEIN BROAD BEAN MOTTLE 301- VIRUS 328 PV2A_CCMV 2APROTEIN COWPEA CHLOROTIC 178- MOTTLE VIRUS 328 PV2A_CMVFN 2A PROTEINCUCUMBER MOSAIC 792- VIRUS 819 (STRAIN FNY) PV2A_PSVJ 2A PROTEIN PEANUTSTUNT 325- 717- VIRUS 352 751 (STRAIN J) PV2A_TAV 2A PROTEIN TOMATOASPERMY 313- 722- VIRUS 340 756 PV30K_HCMVE 30 KD MAJOR HUMAN 194- EARLYPROTEIN CYTOMEGALOVIRUS 221 (STRAIN EISENHARDT) PV30K_TRVTC 29.1 KDTOBACCO RATTLE 130- PROTEIN VIRUS 160 (STRAIN TCM) PV33P_ADE41 33 KDHUMAN ADENOVIRUS  15- PHOSPHOPROTEIN TYPE 41 42 PV362_ASFB7 K′362PROTEIN AFRICAN SWINE FEVER  75- VIRUS (STRAIN BA71V) 102 PV363_ASFB7D′363 PROTEIN AFRICAN SWINE FEVER  3- 172- VIRUS (STRAIN BA71V) 30 109PV3A_BMV 3A PROTEIN BROME MOSAIC  11- VIRUS 38 PV3A_CMVFN 3A PROTEINCUCUMBER MOSAIC 222- VIRUS 252 (STRAIN FNY) PV3A_CMVM 3A PROTEINCUCUMBER MOSAIC 217- VIRUS 252 (STRAIN M) PV3A_CWVO 3A PROTEIN CUCUMBERMOSAIC 222- VIRUS 253 (STRAIN O) PV3A_CMVY 3A PROTEIN CUCUMBER MOSAIC222- VIRUS 253 (STRAIN Y) PV3A_IBVB 3A PROTEIN AVIAN INFECTIOUS  25-BRONCHITIS VIRUS 57 (STRAIN BEAUDETTE) PV3A_IBVU5 3A PROTEIN AVIANINFECTIOUS  29- BRONCHITIS VIRUS 56 (STRAIN UK/183/66) PV3B_IBVB 3BPROTEIN AVIAN INFECTIOUS  6- BRONCHITIS VIRUS 33 (STRAIN BEAUDETTE)PV50K_BYDVP 50 KD BARLEY YELLOW DWARF 119- PROTEIN VIRUS (ISOLATE PAY)146 PV51K_BWYVT 51 KD BEET WESTERN YELLOWS 113- 424- PROTEIN VIRUS(ISOLATE FL-1) 147 451 PV51K_BWYVG 51 KD BEET WESTERN YELLOWS 113- 424-PROTEIN VIRUS (ISOLATE GBI) 147 451 PV56K_PLRV1 56 KD POTATO LEAFROLL124- 438- PROTEIN VIRUS 151 472 (STRAIN 1) PV56K_PLRVW 56 KD POTATOLEAFROLL 124- 438- PROTEIN VIRUS 151 477 (STRAIN WAGENINGEN) PV58K_BSMV58 KD BARLEY STRIPE MOSAIC 128- PROTEIN VIRUS 155 PV70K_PLRV1 69.7 KDPOTATO LEAFROLL 110- PROTEIN VIRUS 140 (STRAIN 1) PV70K_PLRVW 69.7 KDPOTATO LEAFROLL 110- PROTEIN VIRUS 140 (STRAIN WAGENINGEN) PV90K_AMVLE90 KD ALFALFA MOSAIC 107- PROTEIN VIRUS 134 (STRAIN 425/ ISOLATE LEIDEN)PVA06_VACCC PROTEIN A6 VACCINIA 157- 250- 213- 314- VIRUS 216 277 310355 (STRAIN COPENHAGEN) PVA06_VACCV PROTEIN A6 VACCINIA 156- 249- 282-313- VIRUS 215 276 309 354 (STRAIN WR) PVA06_VARV PROTEIN A6 VARIOLA157- 250-  2S3-   314- VIRUS 216 277 310 355 PVA08_VACCC PROTEIN A8VACCINIA 176- VIRUS 206 (STRAIN COPENHAGEN) PVA09_VARV PROTEIN A8VARIOLA 176- VIRUS 206 PVA11_VARV PROTEIN A9 VARIOLA  60- VIRUS 95PVA11_VACCC PROTEIN A11 VACCINIA 219- VIRUS 283 (STRAIN COPENHAGEN)PVA11_VARV PROTEIN A11 VARIOLA 220- VIRUS 284 PVA11_VARV 56 KD ABORTIVEVARIOLA 440- LATE PROTEIN VIRUS 467 PVA20_VACCC PROTEIN A20 VACCINIA  8-330- VIRUS 67 357 (STRAIN COPENHAGEN) PVA20_VARV PROTEIN A20 VARIOLA  8-330- VIRUS 67 357 PVA22_VACCC PROTEIN A22 VACCINIA  45- VIRUS 72 (STRAINCOPENHAGEN) PVA22_VARV PROTEIN A22 VARIOLA  56- VIRUS 83 PVA23_VACCCPROTEIN A23 VACCINIA  95- VIRUS 144 (STRAIN COPENHAGEN) PVA23_VARVPROTEIN A23 VARIOLA  95- VIRUS 144 PVA28_VACCV PROTEIN A28 VACCINIA  22-VIRUS 49 (STRAIN WR) PVA28_VARV PROTEIN A28 VARIOLA  22- VIRUS 49PVA30_VACCV PROTEIN A30 VACCINIA  12- VIRUS 55 (STRAIN WR) PVA31_VACCCPROTEIN A31 VACCINIA  88- VIRUS 115 (STRAIN COPENHAGEN) PVA31_VARVPROTEIN A31 VARIOLA  88- VIRUS 122 PVA34_VACCC PROTEIN A34 VACCINIA  87-VIRUS 114 (STRAIN COPENHAGEN) PVA34_VACCV PROTEIN A34 VACCINIA  87-VIRUS 114 (STRAIN WR) PVA34_VARV PROTEIN A34 VARIOLA  87- VIRUS 114PVA36_VACCV PROTEIN A36 VACCINIA 120- PRECURSOR VIRUS 155 (STRAIN WR)PVA36_VARV PROTEIN A36 VARIOLA 127- PRECURSOR VIRUS 154 PVA36_VACCCPROTEIN A38 VACCINIA  44- VIRUS 81 (STRAIN COPENHAGEN) PVA38_VACCVPROTEIN A38 VACCINIA  44- VIRUS 81 (STRAIN WR) PVA38_VARV PROTEIN A38VARIOLA  44- VIRUS 91 PVA39_VACCC PROTEIN A39 VACCINIA  37- 155- VIRUS71 182 (STRAIN COPENHAGEN) PVA39_VACCV PROTEIN A39 VACCINIA  75-  93-VIRUS 109 220 (STRAIN WR) PVA43_VACCC PROTEIN A43 VACCINIA  145- VIRUS172 (STRAIN COPENHAGEN) PVA43_VACCV PROTEIN A43 VACCINIA 145- VIRUS 172(STRAIN WR) PVA43_VARV PROTEIN A43 VARIOLA 146- VIRUS 173 PVA47_VACCCPROTEIN A47 VACCINIA 143- VIRUS 184 (STRAIN COPENHAGEN) PVA47_VACCVPROTEIN A47 VACCINIA 143- VIRUS 184 (STRAIN WR) PVA47_VARV PROTEIN A47VARIOLA 142- VIRUS 184 PVA49_VACCC PROTEIN A49 VACCINIA  61- VIRUS 91(STRAIN COPENHAGEN) PVA49_VACCV PROTEIN A49 VACCINIA  61- VIRUS 91(STRAIN WR) PVA49_VARV PROTEIN A49 VARIOLA  61- VIRUS 91 PVA55_VACCCPROTEIN A55 VACCINIA  55- 126- 435- VIRUS 82 156 462 (STRAIN COPENHAGEN)PVA5S_VACCV PROTEIN A55 VACCINIA  55- 126- 435- VIRUS 82 156 462 (STRAINWR) PVAL1_BCTV AL1 PROTEIN BEET CURLY TOP  22- VIRUS 49 PVAL3_OCLVK AL3PROTEIN CASSAVA LATENT  79- VIRUS (STRAIN 106 WEST KENYAN 844)PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT  79- VIRUS 106 (STRAIN NIGERIAN)PVAL3_SLCV AL3 PROTEIN SQUASH LEAF CURL 101- VIRUS 128 PVAL3_TYLCV AL3PROTEIN TOMATO YELLOW LEAF  79- CURL VIRUS 129 PVAT_CAMVC APHIDCAULIFLOWER MOSAIC  22-  93- TRANSMISSION VIRUS (STRAIN CM-1841) 70 129PROTEIN PVAT_CAMVD APHID CAULIFLOWER MOSAIC  22- TRANSMISSION VIRUS 70PROTEIN (STRAIN D/H) PVAT_CAMVE APHID CAULIFLOWER MOSAIC  22-  93-TRANSMISSION VIRUS 70 129 PROTEIN (STRAIN BBC) PVAT_CAMVN APHIDCAULIFLOWER MOSAIC  22-  93- TRANSMISSION VIRUS 70 129 PROTEIN (STRAINNY8153) PVAT_CAMVP APHID CAULIFLOWER MOSAIC  22-  93- TRANSMISSION VIRUS70 129 PROTEIN (STRAIN PV147) PVAT_CAMVS APHID  22-  93- TRANSMISSION 70130 PROTEIN PVAT_CAMVW APHID CAULIFLOWER MOSAIC  36- TRANSMISSION VIRUS(STRAIN W260) 70 PROTEIN PVAT_CERV APHID CARNATION ETCHED 102-TRANSMISSION RING 138 PROTEIN VIRUS PVAT_FMVD APHID FIGWORT MOSAIC  52-103- TRANSMISSION VIRUS 82 130 PROTEIN (STRAIN DXS) PVB03_VACCV PROTEINB3 VACCINIA VIRUS 108- (STRAIN WR) 135 PVB04_VACCC PROTEIN B4 VACCINIAVIRUS  92- 182- 286- 324- (STRAIN COPENHAGEN) 123 211 313 361PVB04_VACCV PROTEIN B4 VACCINIA VIRUS  92- 182- 286- 324- (STRAIN WR)123 211 313 361 PVB04_VARV PROTEIN B4 VARIOLA VIRUS  89- 182- 286- 324-127 211 313 361 PVB05_VACCO PLAQUE-SIZE/HOST VACCINIA VIRUS 254- RANGEPRO PREC (STRAIN LC16MO) 284 PVB05_VACCC PLAQUE-SIZE/HOST VACCINIA VIRUS254- RANGE PRO PREC (STRAIN COPENHAGEN) 284 PVB05_VACCL PLAQUE-SIZE/HOSTVACCINIA VIRUS 254- RANGE PRO PREC (STRAIN LISTER) 284 PVB05_VACCVPLAQUE-SIZE/HOST VACCINIA VIRUS 254- RANGE PRO PREC (STRAIN WR) 284PVB07_VACCV PROTEIN B7 VACCINIA VIRUS  28- PRECURSOR (STRAIN WR) 62PVB08_VACCC PROTEIN B8 VACCINIA VIRUS  26- PRECURSOR (STRAIN COPENHAGEN)53 PVB08_VACCV PROTEIN B8 VACCINIA VIRUS  26- PRECURSOR (STRAIN WR) 53PVB11_VACCC PROTEIN B11 VACCINIA VIRUS  21- (STRAIN COPENHAGEN) 54PVB11_VACCV PROTEIN B11 VACCINIA VIRUS  5- (STRAIN WR) 38 PVB16_COWPXIL-1 BIND PRO COWPOX VIRUS 113- PRECURSOR 140 PVB17_VACCC PROTEIN B17VACCINIA VIRUS 258- (STRAIN COPENHAGEN) 285 PVB17_VACCV PROTEIN B17VACCINIA VIRUS 258- (STRAIN WR) 285 PVB18_VACCC PROTEIN B18 VACCINIAVIRUS 337- (STRAIN COPENHAGEN) 375 PVB18_VACCV PROTEIN B18 VACCINIAVIRUS 337- (STRAIN WR) 375 PVB18_VARV PROTEIN B18 VARIOLA VIRUS 337- 378PVB19_VACCC SURFACE ANTIGEN VACCINIA VIRUS 182- S PRECURSOR (STRAINCOPENHAGEN) 212 PVB19_VACCD SURFACE ANTIGEN VACCINIA VIRUS 180- SPRECURSOR (STRAIN DAIREN I) 210 PVB19_VACCV SURFACE ANTIGEN VACCINIAVIRUS 180- S PRECURSOR (STRAIN WR) 210 PVB19_VARV SURFACE ANTIGENVARIOLA VIRUS 180- S PRECURSOR 210 PVB20_VACCC PROTEIN B20 VACCINIAVIRUS  48- (STRAIN COPENHAGEN) 82 PVB21_VACCV PROTEIN B21 VACCINIA VIRUS 64- (STRAIN WR) 91 PVBL1_BGMV BL1 PROTEIN BEAN GOLDEN 120- 248- MOSAICVIRUS 147 275 PVBL1_CLVK BL1 PROTEIN CASSAVA LATENT 118- VIRUS (STRAIN145 WEST KENYAN 844) PVBL1_CLVN BL1 PROTEIN CASSAVA LATENT 118- VIRUS145 (STRAIN NIGERIAN) PVBL1_PYMW BL1 PROTEIN POTATO YELLOW 120- MOSAICVIRUS 147 (ISOLATE VENEZUELA) PVC02_VACCC PROTEIN C2 VACCINIA VIRUS 405-(STRAIN COPENHAGEN) 412 PVC02_VACCV PROTEIN C2 VACCINIA VIRUS  41- 405-(STRAIN WR) 71 432 PVC04_SFVKA PROTEIN C4 SHOPE FIBROMA 209- 484- VIRUS236 515 (STRAIN KASZA) PVC04_VACCC PROTEIN C4 VACCINIA VIRUS  12-(STRAIN COPENHAGEN) 46 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS  12-(STRAIN WR) 46 PVC04_VARV PROTEIN G4 VARIOLA VIRUS  12- 46 PVC05_SFVKAHYPOTHETICAL SHOPE FIBROMA  85- 152- PROTEIN C5 VIRUS 125 179 (STRAINKASZA) PVC05_VACCC PROTEIN C5 VACCINIA VIRUS  38- (STRAIN COPENHAGEN) 65PVC05_VACCV PROTEIN C5 VACCINIA VIRUS  38- (STRAIN WR) 65 PVC05_VARVPROTEIN C5 VARIOLA VIRUS  36- 66 PVC07_VACCV PROTEIN C7 VACCINIA VIRUS 80- (STRAIN WR) 111 PVC07_VARV PROTEIN C7 VARIOLA VIRUS  80- 111PVC09_VACCC PROTEIN C9 VACCINIA VIRUS  42-  82- 178- 252- 289-  575-(STRAIN COPENHAGEN) 69 116 205 279 325 605 PVC06_VACCV PROTEIN C9VACCINIA VIRUS  42-  82- 178- 252- 219-  575- (STRAIN WR) 69 116 205 279323 605 PVC10_VACCC PROTEIN C10 VACCINIA VIRUS 136- (STRAIN COPENHAGEN)180 PVC10_VACCV PROTEIN C10 VACCINIA VIRUS 136- (STRAIN WR) 163PVC10_VARV PROTEIN C10 VARIOLA VIRUS 136- 163 PVC13_SFVKA PROTEIN C13SHOPE FIBROMA  3-  39- 137- 206- VIRUS 30 65 182 240 (STRAIN KASZA)PVC17_VACCC PROTEIN C17/B23 VACCINIA VIRUS 111- (STRAIN COPENHAGEN) 152PVC18_VACCC PROTEIN C18/B24 VACCINIA VIRUS  40- (STRAIN COPENHAGEN) 74PVC19_SFVKA PROTEIN C19 SHOPE FIBROMA  56- VIRUS 97 (STRAIN KASZA)PVC20_VACCC PROTEIN C20/B26 VACCINIA VIRUS  72- (STRAIN COPENHAGEN) 99PVC22_VARV PROTEIN C22/B28 VARIOLA VIRUS 299- HOMOLOG 326 PVCAP_EBVMAJOR CAPSID EPSTEIN-BARR 847- PROTEIN VIRUS 874 (STRAIN B95-8)PVCAP_HSV6U MAJOR CAPSID HERPES SIMPLEX 136- 355- PROTEIN VIRUS 170 382(TYPE 6/STRAIN UGANDA-1102) PVCAP_HSVSA MAJOR CAPSID HERPES 769- PROTEINVIRUS SAIMIRI 799 (STRAIN 11) PVCG3_NPVAC DNA-BINDING AUTOGRAPHA 133-199- PROTEIN CALIFORNICA 165 248 NUCLEAR POLYHEDROSIS VIRUS PVCOM_ADE02MINOR CORE HUMAN ADENOVIRUS  88- PROTEIN TYPE 2 115 PVCOM_ADE05 MINORCORE HUMAN ADENOVIRUS  87- PROTEIN TYPE 5 114 PVD05_FOWP1 92.6 KDFOWLPOX VIRUS  6- 184- 321- PROTEIN (STRAIN FP-1) 33 211 348 PVD05_VACCCPROTEIN D5 VACCINIA VIRUS 240- 333- (STRAIN COPENHAGEN) 267 360PVD05_VACCV PROTEIN D5 VACCINIA VIRUS 240- (STRAIN WR) 267 PVD05_VARVPROTEIN D5 VARIOLA VIRUS 240- 267 PVD09_VACCC PROTEIN D9 VACCINIA VIRUS123- (STRAIN COPENHAGEN) 150 PVD09_VACCV PROTEIN D9 VACCINIA VIRUS 123-(STRAIN WR) 150 PVD09_VARV PROTEIN D9 VARIOLA VIRUS 123- 160 PVD10_SFVKAPROTEIN D10 SHOPE FIBROMA  18- VIRUS 52 (STRAIN KASZA) PVDBP_CERVDNA-BINDING CARNATION ETCHED  2- PROTEIN RING VIRUS 35 PVE02_VARVPROTEIN E2 VARIOLA VIRUS 282- 322 PVE06_VACCC PROTEIN E6 VACCINIA VIRUS 89- 437- (STRAIN COPENHAGEN) 116 464 PVE06_VACCV PROTEIN E6 VACCINIAVIRUS  89- 437- (STRAIN WR) 116 464 PVE06_VARV PROTEIN E6 VARIOLA VIRUS 89- 367- 437- 116 394 464 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUS 60- TYPE 18 87 PVE1_KPV2A E1 PROTEIN HUMAN PAPILLOMAVIRUS  21- TYPE 2A48 PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS 180- TYPE 33 207PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS 103- TYPE 39 130 PVE1_HPV41E1 PROTEIN HUMAN PAPILLOMAVIRUS  55- TYPE 41 89 PVE1_HPV42 E1 PROTEINHUMAN PAPILLOMAVIRUS  25- TYPE 42 59 PVE1_HPV47 E1 PROTEIN HUMANPAPILLOMAVIRUS 146- TYPE 47 173 PVE1_HPVS7 E1 PROTEIN HUMANPAPILLOMAVIRUS  21- TYPE 57 48 PVE26_NPVAC EARLY 25.9 KD AUTOGRAPHA  72-PROTEIN CALIFORNICA 113 NUCLEAR POLYHEDROSIS VIRUS PVE2_CRPVK PROBABLEE2 COTTONTAIL RABBIT (SHOPE)  5- PROTEIN PAPILLOMAVIRUS (STRAIN 34KANSAS) PVE2_HPV05 PROBABLE E2 HUMAN PAPILLOMAVIRUS  17- PROTEIN TYPE 551 PVE2_HPV13 E2 PROTEIN HUMAN PAPILLOMAVIRUS 157- 334- TYPE 13 184 361PVE2_HPV16 E2 PROTEIN HUMAN PAPILLOMAVIRUS  61- 312- TYPE 16 105 342PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS 313- TYPE 18 340 PVE2_HPV1AE2 PROTEIN HUMAN PAPILLOMAVIRUS 159- TYPE 1A 186 PVE2_HPV2A E2 PROTEINHUMAN PAPILLOMAVIRUS 159- TYPE 2A 193 PVE2_HPV33 E2 PROTEIN HUMANPAPILLOMAVIRUS 304- TYPE 33 331 PVE2_HPV35 E2 PROTEIN HUMANPAPILLOMAVIRUS  158- 327- TYPE 35 192 354 PVE2_HPV39 E2 PROTEIN HUMANPAPILLOMAVIRUS  7- 323- TYPE 39 34 357 PVE2_HPV47 E2 PROTEIN HUMANPAPILLOMAVIRUS  7-  48- 276- TYPE 47 51 175 303 PVE2_HPV51 E2 PROTEINHUMAN PAPILLOMAVIRUS 137- TYPE 51 184 PVE2_HPV57 E2 PROTEIN HUMANPAPILLOMAVIRUS  66- TYPE 57 193 PVE2_HPV58 E2 PROTEIN HUMANPAPILLOMAVIRUS  2- 309- TYPE 58 36 336 PVE2_HPV5B PROBABLE E2 HUMANPAPILLOMAVIRUS  17- PROTEIN TYPE 5B 51 PVE2_PAPVE PROBABLE E2 EUROPEANELK  20- PROTEIN PAPILLOMAVIRUS 150 PVE2_PCPV1 E2 PROTEIN PYGMYCHIMPANZEE 267- 327- PAPILLOMAVIRUS TYPE 1 294 361 PVE4_HPV05 PROBABLEE4 HUMAN PAPILLOMAVIRUS 202- PROTEIN TYPE 5 229 PVE4_HPV11 PROBABLE E4HUMAN PAPILLOMAVIRUS  81- PROTEIN TYPE 11 108 PVE4_HPV16 PROBABLE E4HUMAN PAPILLOMAVIRUS  66- PROTEIN TYPE 16 93 PVE4_HPV18 PROBABLE E4HUMAN PAPILLOMAVIRUS  59- PROTEIN TYPE 18 86 PVE4_HPV31 PROBABLE E4HUMAN PAPILLOMAVIRUS  75- PROTEIN TYPE 31 102 PVE4_HPV41 PROBABLE E4HUMAN PAPILLOMAVIRUS  63- PROTEIN TYPE 41 97 PVE4_HPV5B PROBABLE E4HUMAN PAPILLOMAVIRUS 202- PROTEIN TYPE 5B 229 PVE5A_HPV11 PROBABLE E5AHUMAN PAPILLOMAVIRUS  30- PROTEIN TYPE 11 60 PVE5A_HPV6B PROBABLE E5AHUMAN PAPILLOMAVIRUS  30- PROTEIN TYPE 6B 60 PVESA_HPV6C PROBABLE E5AHUMAN PAPILLOMAVIRUS  30- PROTEIN TYPE 6C 60 PVE5_HPV35 PROBABLE E5HUMAN PAPILLOMAVIRUS  27- PROTEIN TYPE 35 54 PVE5_HPV5B PROBABLE E5HUMAN PAPILLOMAVIRUS  11- PROTEIN TYPE 5B 41 PVE5_PCPV1 PROBABLE E5PYGMY CHIMPANZEE  35- PROTEIN PAPILLOMAVIRUS TYPE 1 62 PVE6_HPV18 E6PROTEIN HUMAN PAPILLOMAVIRUS  75- TYPE 18 102 PVE6_HPV31 E6 PROTEINHUMAN PAPILLOMAVIRUS  69- TYPE 31 96 PVE6_KPV39 E6 PROTEIN HUMANPAPILLOMAVIRUS  71- TYPE 39 102 PVE6_HPV41 E6 PROTEIN HUMANPAPILLOMAVIRUS 119- TYPE 41 146 PVE6_KPV45 E6 PROTEIN HUMANPAPILLOMAVIRUS  75- TYPE 45 102 PVE6_HPV51 E6 PROTEIN HUMANPAPILLOMAVIRUS  72- TYPE 51 99 PVE6_HPVME E6 PROTEIN HUMANPAPILLOMAVIRUS  71- TYPE ME180 102 PVE94_NPVAC EARLY 94 KD AUTOGRAPHA620- PROTEIN CALIFORNICA 647 NUCLEAR POLYHEDROSIS VIRUS PVEF_GVTN VIRALENHANCING TRICHOPLUSIA NI 411- FACTOR GRANULOSIS 438 VIRUS PVENV_DHYHENVELOPE DHORI 318- GLYCOPROTEIN VIRUS (STRAIN 366 PRECURSORINDIAN/1313/61) PVENV_EAV PROBABLE EQUINE ARTERITIS 120- ENVELOPE VIRUS147 PROTEIN PVENV_THOGV ENVELOPE THOGOTO VIRUS 313- GLYCOPROTEIN 347PRECURSOR PVF03_VACCC PROTEIN F3 VACCINIA VIRUS  71- 185- (STRAINCOPENHAGEN 110 212 PVF03_VACCV PROTEIN F3 VACCINIA VIRUS  71- 185-(STRAIN WR) 110 212 PVF05_VACCP 36 KD VACCINIA VIRUS  33- MAJOR MEMBRANE(STRAIN L-1VP) 60 PRO PRECURSO PVF05_VACCV 36 KD VACCINIA VIRUS  33-MAJOR MEMBRANE (STRAIN WR) 60 PRO PRECURSO PVF06_VAXV PROTEIN F5 VARIOLAVIRUS  10- 44 PVF11_VACCC PROTEIN F11 VACCINIA VIRUS 274- (STRAINCOPENHAGEN) 321 PVF11_VACCP PROTEIN F11 VACCINIA VIRUS 270- (STRAINL-1VP) 317 PVF11_VARV PROTEIN F11 VARIOLA VIRUS 274- 321 PVF12_VACCCPROTEIN F12 VACCINIA VIRUS  10- 113- 554- (STRAIN COPENHAGEN) 37 140 581PVF12_VACCP PROTEIN F12 VACCINIA VIRUS  10- 113- 554- (STRAIN L-1VP) 37140 581 PVF12_VARV PROTEIN F12 VARIOLA VIRUS  10- 202- 554- 37 236 581PVF16_VACCC PROTEIN F16 VACCINIA VIRUS  35- 152- (STRAIN COPENHAGEN) 62179 PVF16_VACCP PROTEIN F16 VACCINIA VIRUS  35- 152- (STRAIN L-1VP) 62179 PVF16_VARV PROTEIN F16 VARIOLA VIRUS  35- 149- 62 179 PVFP4_FOWPVPROTEIN FP4 FOWLPOX VIRUS 146- 173 PVFUS_ORFNZ 10 KD FUSION ORF VIRUS 59- PROTEIN (STRAIN NZ2) 86 PVFUS_VACCC 14 KD FUSION VACCINIA VIRUS 37- PROTEIN (STRAIN COPENHAGEN) 64 PVFUS_VACCV KD FUSION VACCINIA VIRUS 37- PROTEIN (STRAIN WR) 64 PVG01_VACCC PROTEIN G1 VACCINIA VIRUS 225-301- (STRAIN COPENHAGEN) 252 335 PVG01_VACCV PROTEIN G1 VACCINIA VIRUS164- 240- (STRAIN WR) 191 274 PVG01_VARV PROTEIN G1 VARIOLA VIRUS 225-301- 252 335 PVG02_VACCV ISATIN-B-TSC VACCINIA VIRUS  96- DEP PROTEIN(STRAIN WR) 123 PVG02_VARV ISATIN-B-TSC VARIOLA VIRUS  96- DEP PROTEIN123 PVG03_HSVEB GENE 3 PROTEIN EQUINE HERPESVIRUS 146- TYPE 1 (STRAINAB4P) 176 PVG03_HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS 146- TYPE 1 176(STRAIN KENTUCKY A) PVG05_VACCC PROTEIN G5 VACCINIA VIRUS  48- 131- 225-355- (STRAIN COPENHAGEN) 75 161 289 389 PVG05_VARV PROTEIN G5 VARIOLAVIRUS  48- 124- 255- 355- 75 161 289 389 PVG07_HSV11 HYPOTH GENE 7ICTALURID  71- MEMB PRO HERPESVIRUS 1 98 PVG09_VACCC PROTEIN F1 VACCINIAVIRUS 308- (STRAIN COPENHAGEN) 338 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS271- (STRAIN WR) 301 PRG09_VARV PROTEIN F1 VARIOLA VIRUS 308- 338PVG12_SPVIR GENE 12 PROTEIN SPIROPLASMA  11- VIRUS 45 SPV1-R8A2 BPVG17_HSV11 HYPOTHETICAL ICTALURID 177- GENE 17 PROTEIN HERPESVIRUS 1204 PVG18_HSV11 HYPOTHETICAL ICTALURID 174- GENE 18 PROTEIN HERPESVIRUS1 208 PVG1_SPVIR CAPSID SPIROPLASMA 260- PROTEIN VIRUS 287 SPV1-R8A2 BPVG1_SPV4 CAPSID SPIROPLASMA 287- 383- PROTEIN VIRUS 4 314 410PVG22_HSV11 HYPOTHETICAL ICTALURID 373- 581- 668- 766- GENE 22 PROTEINHERPESVIRUS 1 400 622 705 824 PVG24_HSV11 HYPOTHETICAL ICTALURID  31-GENE 24 PROTEIN HERPESVIRUS 1 58 PVG28_HSV11 HYPOTHETICAL ICTALURID 253-497- GENE 28 PROTEIN HERPESVIRUS 1 290 528 PVG2R_AMEPV HYPOTHETICALAMSACTA MOOREI  33-  91- G2R PROTEIN ENTOMOPOXVIRUS 64 118 PVG2_SPVIRGENE 2 PROTEIN SPIROPLASMA 285- VIRUS 326 SPV1-R8A2 B PVG2_SPV4 GENE 2PROTEIN SPIROPLASMA 146- 175- 262- VIRUS 4 173 205 310 PVG34_HSV11HYPOTHETICAL ICTALURID  95- GENE 34 PROTEIN HERPESVIRUS 1 122PVG37_HSV11 HYPOTHETICAL ICTALURID 442- GENE 37 PROTEIN HERPESVIRUS 1469 PVG39_HSV11 HYPOTHETICAL ICTALURID 651- 1088-  GENE 39 PROTEINHERPESVIRUS 1 678 1115 PVG3L_AMEPV HYPOTHETICAL AMSACTA MOOREI  2- G3LPROTEIN ENTOMOPOXVIRUS 29 PVG3_SPVIR GENE 1 PROTEIN SPIROPLASMA  15-VIRUS 49 SPV1-R8A2 0 PVG3_SPV4 GENE 3 PROTEIN SPIROPLASMA  18-  87-VIRUS 4 52 148 PVG45_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI 138- GENE 45PROTEIN (STRAIN 11) 165 PVG46_HSV11 PROBABLE MAJOR ICTALURID 142- 346-897- 973- GLYCOPROTEIN HERPESVIRUS 1 169 373 924 1007 PVG48_HSVSAHYPOTHETICAL HERPESVIRUS SAIMIRI 360- GENE 41 PROTEIN (STRAIN 11) 394PVG4R_AMEPV G4R PROTEIN AMSACTA MOOREI  4- ENTOMOPOXVIRUS 31 PVG4_SPVIRGENE 4 PROTEIN SPIROPLASMA 116- VIRUS 146 SPV1-R8A2 B PVG51_HSV11 HYPOTHGENE 51 ICTALURID  34-  87- MEMBRANE PROTEIN HERPESVIRUS 1 61 114PVG52_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI  47- GENE 52 PROTEIN(STRAIN 11) 74 PVG56_HSV11 HYPOTHETICAL ICTALURID 582- GENE 56 PROTEINHERPESVIRUS 1 609 PVG5_SPVIR GENE 5 PROTEIN SPIROPLASMA  65- VIRUS 92SPV1-R8A2 B PVGS_SPV4 GENE 5 PROTEIN SPIROPLASMA  56- VIRUS 4 83PVG63_HSV11 HYPOTHETICAL ICTALURID 550- GENE 63 PROTEIN HERPESVIRUS 1584 PVG64_HSV11 HYPOTHETICAL ICTALURID 477- GENE 64 PROTEIN HERPESVIRUS1 504 PVG65_HSV11 HYPOTHETICAL ICTALURID 1213-  GENE 65 PROTEINHERPESVIRUS 1 1254 PVG66_HSV11 HYPOTHETICAL ICTALURID 362- GENE 66PROTEIN HERPESVIRUS 1 406 PVG67_HSV11 HYPOTHETICAL ICTALURID 1342-  GENE67 PROTEIN HERPESVIRUS 1 1369 PVG68_HSV11 HYPOTHETICAL ICTALURID 261-GENE 68 PROTEIN HERPESVIRUS 1 288 PVG72_HSV11 HYPOTHETICAL ICTALURID447- GENE 72 PROTEIN HERPESVIRUS 1 481 PVG75_HSV11 HYPOTHETICALICTALURID 388-  GENE 75 HERPESVIRUS 1 422 PROTEIN PVG76_HSV11HYPOTHETICAL ICTALURID 200- GENE 76 HERPESVIRUS 1 227 PROTEIN PVG7_SPV4GENE 7 SPIROPLASMA  14- PROTEIN VIRUS 4 44 PVGF1_IBVB F1 PROTEIN AVIANINFECTIOUS 1230-  2408-  BRONCHITIS 1260 2435 VIRUS PVGL2_CVBF E2 GLYCO-BOVINE CORONAVIRUS 399- 642- 1022-  1278-  PROTEIN (STRAIN F15) 426 6761084 1305 PRECURSOR PVGL2_CVBL9 E2 GLYCO- BOVINE CORONAVIRUS 399- 1022- 1278-  PROTEIN (STRAIN L9) 426 1084 1305 PRECURSOR PVGL2_CVBLY E2 GLYCO-BOVINE CORONAVIRUS 399- 642- 1022-  1278-  PROTEIN (STRAIN LY-138) 426676 1084 1305 PRECURSOR PVGL2_CVBM E2 GLYCO- BOVINE CORONAVIRUS 399-642- 1022-  1278-  PROTEIN (STRAIN MEBUS) 426 676 1084 1305 PRECURSORPVGL2_CVBQ E2 GLYCO- BOVINE CORONAVIRUS 399- 642- 1022-  1279-  PROTEIN(STRAIN QUEBEC) 426 676 1084 1305 PRECURSOR PVGL2_CVBV E2 GLYCO- BOVINECORONAVIRUS 399- 642- 1022-  1278-  PROTEIN (STRAIN VACCINE) 426 6761084 1305 PRECURSOR PVGL2_CVH22 E2 GLYCO- HUMAN CORONAVIRUS 770- 809-1056-  PROTEIN (STRAIN 229E) 797 875 1112 PRECURSOR PVGL2_CVM4 E2 GLYCO-MURINE CORONAVIRUS MHV 643- 1030-  PROTEIN (STRAIN WELD TYPE 4) 684 1092PRECURSOR PVGL2_CVMAS E2 GLYCO- MURINE CORONAVIRUS MHV  36- 591- 978-PROTEIN (STRAIN A59) 63 632 1040 PRECURSOR PVGL2_CVMJC E2 GLYCO- MURINECORONAVIRUS 643- 1030-  PROTEIN MHV (STRAIN 684 1092 PRECURSORJHMV/VARIANT CL-2) PVGL2_CVMJH E2 GLYCO- MURINE CORONAVIRUS MHV 502-889- PROTEIN (STRAIN JHM) 543 951 PRECURSOR PVGL2_CVPFS E2 GLYCO-PORCINE TRANSMISSIBLE  69- 692- 1072-  1353-  PROTEIN GASTROENTERITIS110 733 1145 1389 PRECURSOR CORONAVIRUS (STRAIN F5772 PVGL2_CVPMI E2GLYCO- PORCINE TRANSMISSIBLE  69- 692- 1069-  1353-  PROTEINGASTROENTERITIS 110 733 1145 1389 PRECURSOR CORONAVIRUS (STRAIN MILLEPVGL2_CVPPR E2 GLYCO- PORCINE TRANSMISSIBLE  73- 690- 1067-  1351- PROTEIN GASTROENTERITIS 107 731 1143 1387 PRECURSOR CORONAVIRUS (STRAINPUR40 PVGL2_CVPPU E2 GLYCO- PORCINE TRANSMISSIBLE  69- 690- 1067- 1351-  PROTEIN GASTROENTERITIS 107 731 1143 1387 PRECURSOR CORONAVIRUS(STRAIN PURD PVGL2_CVPR8 E2 GLYCO- PORCINE RESPIRATORY 468- 845- 1129- PROTEIN CORONAVIRUS (STRAIN 509 921 1165 PRECURSOR 86/137004/BRITISHISOLAT PVGL2_CVPRM E2 GLYCO- PORCINE RESPIRATORY 468- 845- 1129- PROTEIN CORONAVIRUS (STRAIN RM4) 509 921 1165 PRECURSOR PVGL2_CVPRT E2GLYCO- PORCINE TRANSMISSIBLE  69- 690- 1067-  1353-  PROTEINGASTROENTERITIS 107 731 1143 1387 PRECURSOR CORONAVIRUS (STRAIN NEB7PVGL2_EBV PROBABLE EPSTEIN-BARR  68- MEMBRANE VIRUS 102 GLYCOPROTEIN(STRAIN B95-8) PVGL2_FIPV E2 GLYCO- FELINE INFECTIOUS 189- 454- 709-1072-  1356-  PROTEIN PERITONITIS VIRUS 233 481 736 1148 1392 PRECURSOR(STRAIN 79-1146) PVGL2_IBV6 E2 GLYCO- AVIAN INFECTIOUS 809- 875- 1057- PROTEIN BRONCHITIS VIRUS 836 903 1091 PRECURSOR (STRAIN 6/82) PVGL2_IBVBE2 GLYCO- AVIAN INFECTIOUS 808- 875- 1056-  PROTEIN BRONCHITIS VIRUS 835902 1090 PRECURSOR (STRAIN BEAUDETTE) PVGL2_IBVD2 E2 GLYCO- AVIANINFECTIOUS 809- 876- 1057-  PROTEIN BRONCHITIS VIRUS 836 903 1091PRECURSOR (STRAIN D274) PVGL2_IBVK E2 GLYCO- AVIAN INFECTIOUS 808- 875-1056-  PROTEIN BRONCHITIS VIRUS 835 902 1090 PRECURSOR (STRAIN KB8523)PVGL2_IBVM E2 GLYCO- AVIAN INFECTIOUS 808- 875- 1056-  PROTEINBRONCHITIS VIRUS 835 902 1090 PRECURSOR (STRAIN M41) PVGLB_EBVGLYCOPROTEIN EPSTEIN-BARR  95- 631- GP110 PRECURSOR VIRUS 122 658(STRAIN B95-8) PVGLB_HCMVA GLYCOPROTEIN HUMAN  25- 397- 440- 851- BPRECURSOR CYTOMEGALOVIRUS 88 424 467 878 (STRAIN AD169) PVGLB_HCMVTGLYCOPROTEIN B HUMAN  50- 397- 435- 852- PRECURSOR CYTOMEGALOVIRUS 88424 462 879 (STRAIN TOWNE) PVGLB_HSVB1 GLYCOPROTEIN 1 BOVINE HERPESVIRUS427- PRECURSOR TYPE 1 454 PVGLB_HSVB2 GLYCO- BOVINE HERPESVIRUS 447-PROTEIN B-1 TYPE 2 474 PRECURSOR (STRAIN BMV) PVGLB_HSVE1 GLYCO- EQUINEHERPESVIRUS 443- 934- PROTEIN B TYPE 1 470 961 PRECURSOR (ISOLATEHVS25A) PVGLB_HSVE4 GLYCO- EQUINE HERPESVIRUS 486- 616- PROTEIN B TYPE 4513 643 PRECURSOR PVGLB_HSVEA GLYCO- EQUINE HERPESVIRUS 443- 934-PROTEIN B TYPE 1 470 961 PRECURSOR (STRAIN AB1) PVGLB_HSVEB GLYCO-EQUINE HERPESVIRUS 443- 934- PROTEIN B TYPE 1 470 961 PRECURSOR (STRAINAB4P) PVGLB_HSVEL GLYCO- EQUINE HERPESVIRUS 443- 933- PROTEIN B TYPE 1470 960 PRECURSOR (STRAIN KENTUCKY D) PVGLB_HSVMD GLYCO- MAREK'S DISEASE 93- 352- PROTEIN B HERPESVIRUS 120 379 PRECURSOR (STRAIN RD-1B)PVGLB_MCMVS GLYCO- MURINE 381- 441- PROTEIN B CYTOMEGALOVIRUS 408 475PRECURSOR (STRAIN SMITH) PVGLC_HSV11 GLYCO- HERPES SIMPLEX 469- PROTEINC VIRUS 510 PRECURSOR (TYPE 1/STRAIN 17) PVGLC_HSV1K GLYCO- HERPESSIMPLEX 469- PROTEIN C VIRUS 510 PRECURSOR (TYPE 1/STRAIN KOS)PVGLC_HSVEB GLYCO- EQUINE HERPESVIRUS 124- PROTEIN C TYPE 1 151PRECURSOR PVGLC_VZVD GLYCOPROTEIN VARICELLA-ZOSTER 295- GPV VIRUS 322(STRAIN DUMAS) PVGLC_VZVS GLYCOPROTEIN VARICELLA-ZOSTER 295- GPV VIRUS322 (STRAIN SCOTT) PVGLE_HSV2 GLYCO- HERPES SIMPLEX 111- PROTEIN E VIRUS(TYPE 2) 148 PRECURSOR PVGLF_BRSVA FUSION BOVINE RESPIRATORY  38- 154-215- 442- 486- GLYCOPROTEIN SYNCYTIAL 65 202 243 469 531 PRECURSOR VIRUS(STRAIN A51908) PVGLF_BRSVC FUSION BOVINE RESPIRATORY  38- 154- 216-444- 488- GLYCOPROTEIN SYNCYTIAL VIRUS 65 202 243 471 533 PRECURSOR(STRAIN COPENHAGEN) PVGLF_BRSVR FUSION BOVINE RESPIRATORY  38- 154- 216-444- 488- GLYCOPROTEIN SYNCYTIAL VIRUS 65 202 243 471 533 PRECURSOR(STRAIN RB94) PVGLF_CDVO FUSION CANINE DISTEMPER 252- 340- GLYCOPROTEINVIRUS 293 367 PRECURSOR (STRAIN ONDERSTEPOORT) PVGLF_MRSV1 FUSION HUMANRESPIRATORY  38- 154- 442- 488- GLYCOPROTEIN SYNCYTIAL VIRUS 65 203 471515 PRECURSOR (SUBGROUP B/STRAIN 18537) PVGLF_HRSVA FUSION HUMANRESPIRATORY  38- 154- 213- 488- GLYCOPROTEIN SYNCYTIAL VIRUS 65 202 243518 PRECURSOR (STRAIN A2) PVGLF_HRSVL FUSION HUMAN RESPIRATORY  38- 154-216- 444- 488- GLYCOPROTEIN SYNCYTIAL VIRUS 65 202 243 471 515 PRECURSOR(SUBGROUP A/STRAIN LONG) PVGLF_HRSVR FUSION HUMAN RESPIRATORY  38- 154-213- 442- 488- GLYCOPROTEIN SYNCYTIAL VIRUS 65 202 243 471 518 PRECURSOR(STRAIN RSS-2) PVGLF_MEASE FUSION MEASLES 228- GLYCOPROTEIN VIRUS(STRAINS 262 PRECURSOR EDMONSTON AND HALLE) PVGLF_MEASI FUSION MEASLES231- GLYCOPROTEIN VIRUS (STRAIN 265 PRECURSOR JP-3-CA) PVGLF_MEASYFUSION MEASLES 228- GLYCOPROTEIN VIRUS (STRAIN 262 PRECURSOR YAMAGATA-1)PVGLF_MUMPI FUSION MUMPS  20- 447- GLYCOPROTEIN VIRUS (STRAIN SBL-1) 54486 PRECURSOR PVGLF_MUMPM FUSION MUMPS  20- 447- GLYCOPROTEIN VIRUS(STRAIN 54 486 PRECURSOR MIYAHARA VACCINE) PVGLF_MUMPR FUSION MUMPS  20-447- GLYCOPROTEIN VIRUS (STRAIN RW) 54 486 PRECURSOR PVGLF_MUMPS FUSIONMUMPS 151- 426- GLYCOPROTEIN VIRUS (STRAIN SBL) 178 511 PRECURSORPVGLF_NDVA FUSION NEWCASTLE DISEASE 151- 426- GLYCOPROTEIN VIRUS (STRAIN178 512 PRECURSOR AUSTRALIA-VICTORIA/32) PVGLF_NDVB FUSION NEWCASTLEDISEASE 151- 426- GLYCOPROTEIN VIRUS 178 512 PRECURSOR (STRAIN BEAUDETTECMS) PVGLF_NDVH3 FUSION NEWCASTLE DISEASE 151- 426- GLYCOPROTEIN VIRUS178 512 PRECURSOR (STRAIN HER/33) PVGLF_NDVH4 FUSION NEWCASTLE DISEASE151- 426- GLYCOPROTEIN VIRUS 178 512 PRECURSOR (STRAIN B1-HITCHNER/47)PVGLF_NDVI FUSION NEWCASTLE DISEASE 151- 426- GLYCOPROTEIN VIRUS 178 512PRECURSOR (STRAIN ITALIEN/45) PVGLF_NDVL FUSION NEWCASTLE DISEASE 151-192- 426- GLYCOPROTEIN VIRUS 178 219 512 PRECURSOR (STRAIN LAS/46)PVGLF_NDVM FUSION NEWCASTLE DISEASE 151- 437- GLYCOPROTEIN VIRUS 178 512PRECURSOR (STRAIN MIYADERA/51) PVGLF_NDVQ FUSION NEWCASTLE DISEASE 151-433- GLYCOPROTEIN VIRUS 178 512 PRECURSOR (STRAIN QUEENSLAND/66)PVGLF_NDVT FUSION NEWCASTLE DISEASE 151- 426- GLYCOPROTEIN VIRUS 178 512PRECURSOR (STRAIN TEXAS) PVGLF_NDVTG FUSION NEWCASTLE DISEASE 151- 426-GLYCOPROTEIN VIRUS 178 512 PRECURSOR (STRAIN TEXAS G.B./48) PVGLF_NDVUFUSION NEWCASTLE DISEASE 151- 426- GLYCOPROTEIN VIRUS 178 512 PRECURSOR(STRAIN ULSTER/67) PVGLF_PMODV FUSION PHOCINE DISTEMPER  36- 221- 309-GLYCOPROTEIN VIRUS 63 202 336 PRECURSOR PVGLF_PI1HC FUSION HUMANPARAINFLUENZA 1 147- 210- GLYCOPROTEIN VIRUS (STRAIN C39) 174 266PRECURSOR PVGLF_PI2H FUSION HUMAN PARAINFLUENZA 2  90- 141- 238- 483-GLYCOPROTEIN VIRUS 117 175 266 528 PRECURSOR PVGLF_PI2HG FUSION HUMANPARAINFLUENZA 2  90- 141- 238- 483- GLYCOPROTEIN VIRUS (STRAIN GREER)117 175 266 528 PRECURSOR PVGLF_PI2HT FUSION HUMAN PARAINFLUENZA 2  90-141- 238- 483- GLYCOPROTEIN VIRUS (STRAIN TOSHIBA) 117 175 266 528PRECURSOR PVGLF_PI3B FUSION BOVINE PARAINFLUENZA 115- 207- 459-GLYCOPROTEIN 3 VIRUS 182 241 497 PRECURSOR PVGLF_PI3H4 FUSION HUMANPARAINFLUENZA 3 115- 207- 457- GLYCOPROTEIN VIRUS (STRAIN NIH 47885) 182241 497 PRECURSOR PVGLF_RINDK FUSION RINDERPEST 224- 458- GLYCOPROTEINVIRUS 265 485 PRECURSOR (STRAIN KABETE O) PVGLF_RINDL FUSION RINDERPEST224- 458- GLYCOPROTEIN VIRUS 265 506 PRECURSOR (STRAIN L) PVGLF_SEND5FUSION SENDAI 122- 211- 480- GLYCOPROTEIN VIRUS 149 245 507 PRECURSOR(STRAIN Z/HOST MUTANTS) PVGLF_SENDF FUSION SENDAI 122- 211- 480-GLYCOPROTEIN VIRUS 149 245 507 PRECURSOR (STRAIN FUSHIMI) PVGLF_SENDHFUSION SENDAI 122- 211- 480- GLYCOPROTEIN VIRUS 149 245 507 PRECURSOR(STRAIN HARRIS) PVGLF_SENDJ FUSION SENDAI 122- 211- 480- GLYCOPROTEINVIRUS 149 245 507 PRECURSOR (STRAIN HVJ) PVGLF_SENDZ FUSION SENDAI 122-211- 480- GLYCOPROTEIN VIRUS (STRAIN Z) 149 245 507 PRECURSOR PVGLF_SV41FUSION SIMIAN 144- 241- 459- GLYCOPROTEIN VIRUS 41 185 269 496 PRECURSORPVGLF_SV5 FUSION SIMIAN 137- 417- GLYCOPROTEIN VIRUS 5 171 444 PRECURSOR(STRAIN WJ) PVGLF_TRTV FUSION TURKEY 124- 193- 457- GLYCOPROTEINRHINOTRACHEITIS 161 200 484 PRECURSOR VIRUS PVGLG_BEFV SPIKE BOVINEEPHEMERAL 523- GLYCOPROTEIN FEVER 557 PRECURSOR VIRUS PVGLG_BRSVC MAJORBOVINE RESPIRATORY  92- SURFACE SYNCYTIAL VIRUS 123 GLYCO- (STRAINCOPENHAGEN) PROTEIN G PVGLG_HRSV1 MAJOR SURFACE HUMAN RESPIRATORY  63-GLYCO- SYNCYTIAL VIRUS 93 PROTEIN G (SUBGROUP B/ STRAIN 18531)PVGLG_HRSV4 MAJOR SURFACE HUMAN RESPIRATORY  66- GLYCO- SYNCYTIAL VIRUS107 PROTEIN G (STRAIN RSU5857) PVGLG_HRSV5 MAJOR SURFACE HUMANRESPIRATORY 243- GLYCO- SYNCYTIAL VIRUS 273 PROTEIN G (STRAIN RSU6190)PVGLG_HRSV8 MAJOR SURFACE HUMAN RESPIRATORY  66- GLYCO- SYNCYTIAL VIRUS93 PROTEIN G (SUBGROUP B/STRAIN 8/60) PVGLG_HSVE4 GLYCO- EQUINE HERPES271- PROTEIN G VIRUS TYPE 4 298 PRECURSOR PVGLG_HSVEB GLYCO- EQUINEHERPESVIRUS 383- PROTEIN G TYPE 1 410 PRECURSOR (STRAIN AB4P)PVGLG_RABVT SPIKE RABIES VIRUS 489- GLYCOPROTEIN (STRAIN STREET) 519PRECURSOR PVGLG_VSVIG SPIKE VESICULAR STOMATITIS 472- GLYCOPROTEIN VIRUS(SEROTYPE 499 PRECURSOR INDIANA/STRAIN GLASGOW) PVGLH_EBV GLYCOPROTEINEPSTEIN-BARR 549- 619- GP85 VIRUS 576 648 PRECURSOR (STRAIN B95-8)PVGLH_HCMVA GLYCO- HUMAN 107- 270- PROTEIN H CYTOMEGALOVIRUS 136 297PRECURSOR (STRAIN AD169) PVGLH_HCMVT GLYCO- HUMAN 106- PROTEIN HCYTOMEGALOVIRUS 135 PRECURSOR (STRAIN TOWNE) PVGLH_HSV6G GLYCO- HERPESSIMPLEX  62- 360- PROTEIN H VIRUS 89 403 PRECURSOR (TYPE 6/STRAIN GS)PVGLH_HSVSA GLYCO- HERPES 388- PROTEIN H VIRUS SAIMIRI 415 PRECURSOR(STRAIN II) PVGLI_HCMVA IE GLYCO- HUMAN  47- PROTEIN CYTOMEGALOVIRUS 111PRECURSOR (STRAIN AD169) PVGLM_BUNGE M POLYPROTEIN BUNYAVIRUS 512- 914-1128-  PRECURSOR GERMISTON 546 941 1255 PVGLM_BUNL7 M POLYPROTEINBUNYAVIRUS LA CROSSE 913- PRECURSOR (ISOLATE L74) 950 PVGLM_BUNYW MPOLYPROTEIN BUNYAMWERA 340- 504- 682- PRECURSOR VIRUS 374 535 709PVGLM_DUGBV M POLYPROTEIN DUGBE 945- PRECURSOR VIRUS 972 PVGLM_HANTB MPOLYPROTEIN HANTAAN  73- 693- PRECURSOR VIRUS 100 720 (STRAIN B-1)PVGLM_HANTH M POLYPROTEIN HANTAAN  75- PRECURSOR VIRUS 102 (STRAIN HOJO)PVGLM_HANTL M POLYPROTEIN HANTAAN  75- PRECURSOR VIRUS 102 (STRAIN LEE)PVGLM_HANTV M POLYPROTEIN HANTAAN  75- PRECURSOR VIRUS 102 (STRAIN76-118) PVGLM_INSV M POLYPROTEIN IMPATIENS NECROTIC 628- 1069- PRECURSOR SPOT 655 1101 VIRUS PVGLM_PHV M POLYPROTEIN PROSPECT HILL  69-PRECURSOR VIRUS 96 PVGLM_PUUMH M POLYPROTEIN PUUMALA  72- PRECURSORVIRUS (STRAIN 110 HALLNAS B1) PVGLM_PUUMS M POLYPROTEIN PUUMALA  72-PRECURSOR VIRUS (STRAIN 110 SOTKAMO) PVGLM_SEOU8 M POLYPROTEIN SEOUL513- 693- PRECURSOR VIRUS 540 720 (STRAIN 80-J9) PVGLM_SEOUR MPOLYPROTEIN SEOUL  73- 513- 694- PRECURSOR VIRUS 100 540 721 (STRAINR22) PVGLM_SEOUS M POLYPROTEIN SEOUL  73- 513- 694- PRECURSOR VIRUS 100540 721 (STRAIN SR-11) PVGLN_BEFV NONSTRUCT BOVINE EPHEMERAL 523-GLYCOPRO FEVER 564 GNS PRECURSOR VIRUS PVGLP_BEV PEPLOMER BERNE  48-1145-  1184-  1505-  GLYCOPROTEIN VIRUS 82 1179 1211 1532 PRECURSORPVGLY_JUNIN GLYCOPROTEIN JUNIN ARENA  14- POLYPROTEIN VIRUS 41 PRECURSOPVGLY_LASSG GLYCOPROTEIN LASSA  86- POLYPROTEIN VIRUS 113 PRECURSO(STRAIN GA391) PVGLY_MOPEI GLYCOPROTEIN MOPEIA  86- 316- POLYPROTEINVIRUS 113 346 PRECURSO PVGLY_PIARV GLYCOPROTEIN PICHINDE ARENA 334-POLYPROTEIN VIRUS 375 PRECURSO PVGLY_TACV GLYCOPROTEIN TACARIBE 109-315- POLYPROTEIN VIRUS 136 350 PRECURSO PVGLY_TACV5 GLYCOPROTEINTACARIBE 303- POLYPROTEIN VIRUS 338 PRECURSO (STRAIN V5) PVGLY_TACV7GLYCOPROTEIN TACARIBE 302- POLYPROTEIN VIRUS 337 PRECURSO (STRAIN V7)PVGLY_TACVT GLYCOPROTEIN TACARIBE 303- POLYPROTEIN VIRUS 338 PRECURSO(STRAIN TRVL 11598) PVCNM_CPSMV GENOME COWPEA SEVERE 192- POLYPROTEIN MMOSAIC 221 VIRUS (STRAIN DG) PVGP8_EBV PROBABLE EPSTEIN-BARR 104-MEMBRANE VIRUS 149 ANTIGEN GP85 (STRAIN B95-8) PVGP_EBOV STRUCTURALEBOLA 280- PRECURSO VIRUS 314 PVGP_MABVM STRUCTURAL MARBURG 559- 619-GLYCOPROTEIN VIRUS 589 646 PRECURSO (STRAIN MUSOKE) PVGP_MABVPSTRUCTURAL MARBURG 559- 619- GLYCOPROTEIN VIRUS 589 646 PRECURSO (STRAWPOPP) PVH05_VACCC PROTEIN H5 VACCINIA 132- VIRUS 166 (STRAIN COPENHAGEN)PVH05_VACCV PROTEIN H5 VACCINIA 132- VIRUS 166 (STRAIN WR) PVH05_VARVPROTEIN H5 VARIOLA  64- 150- VIRUS 91 184 PVHEL_LSV PROBABLE LILYSYMPTOMLESS 130- HELICASE VIRUS 160 PVHRP_VACCC HOST RANGE VACCINIA 241-PROTEIN VIRUS 275 (STRAIN COPENHAGEN) PVHRP_VACCV HOST RANGE VACCINIA241- PROTEIN VIRUS 275 (STRAIN WR) PV101_VACCC PROTEIN 11 VACCINIA  90-153- VIRUS 117 180 (STRAIN COPENHAGEN) V101_VARV PROTEIN 11 VARIOLA  90-153- VIRUS 117 180 V103_VACCC PROTEIN 13 VACCINIA 160- VIRUS 190 (STRAINCOPENHAGEN) V103_VACCV PROTEIN 13 VACCINIA 160- VIRUS 190 (STRAIN WR)V103_VARV PROTEIN 13 VARIOLA 160- VIRUS 190 V108_VACCC PUTATIVE RNAVACCINIA 290- 548- 593- HELICASE 18 VIRUS 317 575 632 (STRAINCOPENHAGEN) V108_VACCV PUTATIVE RNA VACCINIA 290- 548- 593- HELICASE 18VIRUS 317 575 632 (STRAIN WR) V108_VARV PUTATIVE RNA VARIOLA 290- 548-593- HELICASE 18 VIRUS 317 575 632 VIE1_MCMVS IMMEDIATE-EARLY MURINE261- PROTEIN 1 CYTOMEGALOVIRUS 288 (STRAIN SMITH) VIE2_NPVOPIMMEDIATE-EARLY ORGYIA PSEUDOTSUGATA 355- PROTEIN IE-2 MULTICAPSID 385POLYHEDROSIS VIRUS VIEN_NPVAC IE-REG AUTOGRAPHA 217- 343- PROTEIN IE-NCALIFORNICA 325 400 NUCLEAR POLYHEDROSIS VIRUS VIF_HV1RH VIRION HUMANIMMUNO-  62- INFECTIVITY DEFICIENCY 89 FACTOR VIRUS TYPE 1 (RF/HATISOLATE) VIF_SIVAI VIRION SIMIAN IMMUNO-  2- INFECTIVITY DEFICIENCY 36FACTOR VIRUS (ISOLATE AGM/CLONE GRI-1) VIMP_HSVEB PROS INTEGRAL EQUINEHERPESVIRUS 147- MEMBRANE TYPE 1 (STRAIN AB4P) 174 PROTEIN VIMP_HSVSAINTEGRAL HERPESVIRUS SAIMIRI  80- MEMBRANE (STRAIN 11) 107 PROTEINVINT_SSV1 PROBABLE SULFOLOBUS  73- INTEGRASE VIRUS-LIKE 100 PARTICLESSV1 VJ01_VACCC PROTEIN J1 VACCINIA  22- VIRUS 56 (STRAIN COPENHAGEN)VJ01_VACCV PROTEIN J1 VACCINIA  22- VIRUS 56 (STRAIN WR) VJ01_VARVPROTEIN J1 VARIOLA  22- VIRUS 56 VL1_CRPVK PROBABLE L1 COTTONTAIL RABBIT331- PROTEIN (SHOPE) PAPILLOMAVIRUS 383 (STRAIN KANSAS) VL1_FPVLPROBABLE AVIAN PAPILLOMAVIRUS  38- L1 PROTEIN FPV-L 65 VL1_HPV08PROBABLE HUMAN PAPILLOMAVIRUS 354- L1 PROTEIN TYPE 8 392 VL1_HPV18PROBABLE L1 HUMAN PAPILLOMAVIRUS 183- PROTEIN TYPE 18 210 VL1_HPV33PROBABLE L1 HUMAN PAPILLOMAVIRUS  19- PROTEIN TYPE 33 46 VL1_HPV41PROBABLE L1 HUMAN PAPILLOMAVIRUS 345- PROTEIN TYPE 41 372 VL1_HPV51PROBABLE L1 HUMAN PAPILLOMAVIRUS  19- PROTEIN TYPE 51 46 VL1_HPV58PROBABLE L1 HUMAN PAPILLOMAVIRUS  45- PROTEIN TYPE 58 72 VL2_HPV1APROBABLE L2 HUMAN PAPILLOMAVIRUS 407- PROTEIN TYPE 1A 445 VL2_HPV41PROBABLE L2 HUMAN PAPILLOMAVIRUS 415- PROTEIN TYPE 41 442 VL3_REOVDMINOR CORE REOVIRUS (TYPE 330- PROTEIN LAMBDA 3 3/STRAIN DEARING) 357VL3_REOVL MINOR CORE REOVIRUS (TYPE 330- PROTEIN LAMBDA 3 1/STRAIN LANG)357 VL96_IRVI L96 PROTEIN TIPULA IRIDESCENT 146- 625- VIRUS 180 652PVM1_REOVL MINOR VIRION REOVIRUS (TYPE 290- STRUCTURAL 1/STRAIN LANG)317 PROTEIN MU PVM21_REOVD MAJOR VIRION REOVIRUS (TYPE 625- STRUCPROTEIN 3/STRAIN DEARING) 662 MU-1/MU- PVM22_REOVD MAJOR VIRION REOVIRUS624- STRUC PROTEIN (TYPE 3/STRAIN 661 MU-1/MU- DEARING) PVM2_REOVJ MAJORVIRION REOVIRUS (TYPE 624- STRUC PROTEIN 1/STRAIN D5/JONES) 661 MU-1/MU-PVM3_REOVD MAJOR REOVIRUS (TYPE 159- 343- 456- 631- NONSTRUCTURAL3/STRAIN DEARING) 186 370 483 690 PROTEIN MU-N PVMA2_BRSVA MATRIX BOVINERESPIRATORY 124- GLYCO- SYNCYTIAL 152 PROTEIN M2 VIRUS (STRAIN A51908)PVMA2_HRSVA MATRIX HUMAN RESPIRATORY 124- GLYCO- SYNCYTIAL 151 PROTEINM2 VIRUS (STRAIN A2) PVMAT_BRSVA MATRIX PROTEIN BOVINE RESPIRATORY 219-SYNCYTIAL 246 VIRUS (STRAIN A51908) PVMAT_HRSVA MATRIX PROTEIN HUMANRESPIRATORY 219- SYNCYTIAL 246 VIRUS (STRAIN A2) PVMAT_INCJJ MATRIX (M)INFLUENZA C 151- PROTEIN VIRUS 185 (STRAIN C/JJ/50) PVMAT_NDVA MATRIXPROTEIN NEWCASTLE DISEASE 247- VIRUS (STRAIN 274 AUSTRALIA-VICTORIA/32)PVMAT_PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2  96- VIRUS (STRAINTOSHIBA) 123 PVMAT_PI3B MATRIX PROTEIN BOVINE PARAINFLUENZA 201- 3 VIRUS231 PVMAT_PI3H4 MATRIX PROTEIN HUMAN PARAINFLUENZA 201- 3 VIRUS 231(STRAIN NIH 47885) PVMAT_SV41 MATRIX PROTEIN SIMIAN 323- VIRUS 41 353PVME1_CVBM E1 GLYCO- BOVINE CORONA 175- PROTEIN VIRUS 209 (STRAIN MEBUS)PVME1_CVTKE E1 GLYCO- TURKEY ENTERIC 175- PROTEIN CORONA VIRUS 209PVME1_IBV6 E1 GLYCO- AVIAN INFECTIOUS  21- 184- PROTEIN BRONCHITIS VIRUS48 218 (STRAIN 6/81) PVME1_IBVB E1 GLYCO- AVIAN INFECTIOUS  21- 184-PROTEIN BRONCHITIS VIRUS 48 218 (STRAIN BEAUDETTE) PVME1_IBVB2 E1 GLYCO-AVIAN INFECTIOUS  21- 184- PROTEIN BRONCHITIS VIRUS 48 218 (STRAINBEAUDETTE M42) PVME1_IBVK E1 GLYCO- AVIAN INFECTIOUS 184- PROTEINBRONCHITIS VIRUS 218 (STRAIN KB8523) PVMP_CAMVC MOVEMENT CAULIFLOWERMOSAIC 220- 273- PROTEIN VIRUS (STRAIN 254 324 CM-1841) PVMP_CAMVDMOVEMENT CAULIFLOWER MOSAIC  29- 220- 273- PROTEIN VIRUS 56 254 324(STRAIN D/H) PVMP_CAMVE MOVEMENT CAULIFLOWER MOSAIC 227- 273- PROTEINVIRUS 254 324 (STRAIN BBC) PVMP_CAMVN MOVEMENT CAULIFLOWER MOSAIC 220-273- PROTEIN VIRUS 254 324 (STRAIN NY8153) PVMP_CAMVS MOVEMENTCAULIFLOWER MOSAIC 220- 273- PROTEIN VIRUS 254 324 (STRAIN STRASBOURG)PVMP_CAMVW MOVEMENT CAULIFLOWER MOSAIC 220- 273- PROTEIN VIRUS 254 324(STRAIN W260) PVMP_CERV MOVEMENT CARNATION ETCHED  26- 100- PROTEIN RINGVIRUS 53 124 PVMP_SOCMV MOVEMENT SOYBEAN CHLOROTIC  4-  78- PROTEINMOTTLE VIRUS 31 118 PVMSA_HPBHE MAJOR SURFACE HERON HEPATITIS 294-ANTIGEN B VIRUS 328 PRECURSOR PVMT1_DHV11 MATRIX PROTEIN 1 DHORJ  38-237- VIRUS (STRAIN 65 264 INDIAN/1313/61) PVMT8_MYXVL M-T8 PROTEINMYXOMA VIRUS 163- (STRAIN LAUSANNE) 190 PVMT9_MYXVL MT-9 PROTEIN MYXOMA465- VIRUS 492 (STRAIN LAUSANNE) PVN34_ROTPC NONSTRUCTURAL PORCINEROTAVIRUS  83- PROTEIN NS34 (GROUP C/ 113 STRAIN COWDEN) PVNCN_PAVBOPROBABLE BOVINE 149- NONCAPSID PARVOVIRUS 176 PROTEIN NP1 PVNCS_ADVGNONCAPSID ALEUTIAN MINK  86- PROTEIN NS-1 DISEASE PARVOVIRUS 148 (STRAING) PVNCS_AEDEV NONCAPSID AEDES DENSONUCLEOSIS  14- 279- 487- 585- 780- 821- PROTEIN NS-1 VIRUS 41 339 517 612 817 848 (STRAIN GKV 002 002)PVNCS_MUM1M NONCAPSID MURINE MINUTE  35- 262- PROTEIN NS-1 VIRUS 62 289(STRAIN MVMI) PVNCS_MUM1V NONCAPSID MURINE MINUTE  35- 262- PROTEIN NS-1VIRUS 62 289 PVNCS_PAVHB NONCAPSID HUMAN 236- PROTEIN NS-1 PARVOVIRUSB19 270 PVNCS_PAVHH NONCAPSID HAMSTER  35- PROTEIN NS-1 PARVOVIRUS H1 62PVNCS_PAVPN NONCAPSID PORCINE PARVOVIRUS  24- 169- 316- PROTEIN NS-1(STRAIN NADL-2) 55 196 346 PVNS1_EHDV2 NONSTRUCTURAL EPIZOOTICHEMORRHAGIC 411- PROTEIN NS1 DISEASE VIRUS 438 (SEROTYPE 2/ TRAINALBERTA PVNS1_IAALA NONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1 VIRUS(STRAIN A/ 198 ALASKA/6/77) PVNS1_IAANN NONSTRUCTURAL INFLUENZA A 171-PROTEIN NS1 VIRUS (STRAIN A/ANN 198 ARBOR/6/60) PVNS1_IACHINONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1 VIRUS (STRAIN 198A/CHILE/1/8)) PVNS1_IACKG NONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1VIRUS (STRAIN 198 A/CHICKEN/ GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURALINFLUENZA A 168- PROTEIN NS1 VIRUS STRAIN A/ 195 CHICKEN/ JAPAN/24)PVNS1_IADA2 NONSTRUCTURAL INFLUENZA A VIRUS 171- PROTEIN NS1 STRAINA/DUCK/ 198 ALBERTA/60/76) PVNS1_IAFOM NONSTRUCTURAL INFLUENZA A 171-PROTEIN NS1 VIRUS 198 (STRAIN A/FORT MONMOUTH/1/47) PVNS1_IAFOWNONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1 VIRUS 198 (STRAIN A/FORTWARREN/1/50) PVNS1_IALE1 NONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1VIRUS 198 (STRAIN A/LENINGRAD/ 134/57) PVNS1_IAMA6 NONSTRUCTURALINFLUENZA A 171- PROTEIN NS1 VIRUS 198 (STRAIN A/MALLARD/ ALBERTA/88/76)PVNS1_IAP11 NONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1 VIRUS 198 (STRAINA/PINTAIL/ ALBERTA/121/79) PVNS1_IAP13 NONSTRUCTURAL INFLUENZA A 171-PROTEIN NS1 VIRUS 198 (STRAIN A/PINTAIL/ ALBERTA/358/79) PVNS1_IATKBNONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1 VIRUS 198 (STRAIN A/TURKEY/BETHLEHEM-GLILIT /1492-B/82) PVNS1_IATKC NONSTRUCTURAL INFLUENZA A 171-PROTEIN NS1 VIRUS 198 (STRAIN A/TURKEY/ CANADA/63) PVNS1_IATRTNONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1 VIRUS 198 (STRAIN A/TERN/TURKMENIA/18/72) PVNS1_IAUDO NONSTRUCTURAL INFLUENZA A 171- PROTEIN NS1VIRUS (STRAIN 198 A/UDORN/307/72) PVNS1_IAUSS NONSTRUCTURAL INFLUENZA A171- PROTEIN NS1 VIRUS 198 (STRAIN A/USSR/90/77) PVNS1_INBPANONSTRUCTURAL INFLUENZA B 171- PROTEIN NS1 VIRUS 198 (STRAIN B/PA/79)PVNS2_IATKR NONSTRUCTURAL INFLUENZA A  87- PROTEIN NS2 VIRUS 114 (STRAINA/TURKEY /OREGON/71) PVNS2_INBLE NONSTRUCTURAL INFLUENZA B  51- PROTEINNS2 VIRUS 78 (STRAIN B/LEE/40) PVNS2_INBYA NONSTRUCTURAL INFLUENZA B 51- PROTEIN NS2 VIRUS 78 (STRAIN B/YAMAGATA/ 1/73) PVNS2_INCJJNONSTRUCTURAL INFLUENZA C  71- vPROTEIN NS2 VIRUS 98 (STRAIN C/JJ/50)PVNS3_CVPFS NONSTRUCTURAL PORCINE TRANSMISSIBLE  9- PROTEIN 3-1GASTROENTERITIS 36 CORONA VIRUS (STRAIN FS772 PVNS4_CVH22 NONSTRUCTURALHUMAN CORONAVIRUS  9- PROTEIN 4 (STRAIN 229E) 36 PVNS4_RSV NONSTRUCTURALRICE STRIPE  6- PROTEIN NS4 VIRUS 40 PVNS7_CVCAE NONSTRUCTURAL CANINEENTERIC  11- PROTEIN 7 CORONAVIRUS 45 (STRAIN K378) PVNS7_CVFE3NONSTRUCTURAL FELINE ENTERIC  8- PROTEIN 1 CORONAVIRUS (STRAIN 4279-1083) PVNS7_CVPFS NONSTRUCTURAL PORCINE TRANSMISSIBLE  34- PROTEIN 7GASTROENTERITIS 61 CORONAVIRUS (STRAIN FS772 PVNS7_CVPPU NONSTRUCTURALPORCINE TRANSMISSIBLE  34- PROTEIN 7 GASTROENTERITIS 61 CORONAVIRUS(STRAIN PURI) PVNS7_CVPRM NONSTRUCTURAL PORCINE RESPIRATORY  34- PROTEIN7 CORONAVIRUS 61 PVNS7_F1PV NONSTRUCTURAL FELINE INFECTIOUS  8- PROTEIN7 PERITONITIS VIRUS 42 (STRAIN 79-1146) PVNSC_PI1HE NONSTRUCTURAL HUMANPARAINFLUENZA  41- PROTEIN C 1 VIRUS (STRAIN 75 C1-14/83) PVNSC_PI3H4NONSTRUCTURAL HUMAN PARAINFLUENZA  58- PROTEIN C 3 VIRUS 99 (STRAIN NIH47885) PVNSM_INSV NONSTRUCTURAL IMPATIENS NECROTIC 262- PROTEIN NS-MSPOT VIRUS 296 PVNST_BUNLC NONSTRUCTURAL BUNYAVIRU  57- PROTEIN NS-S LACROSSE 84 PVNST_TOSV NONSTRUCTURAL TOSCANA VIRUS 146- PROTEIN NS-S 180PVNUC_EBOV NUCLEOPROTEIN EBOLA VIRUS 331- 369 PVNUC_IAANA NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/ANAS ACUTA /PRIMORJE/695/76)PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/ANNARBOR/6/60) PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/BRAZIL/11/78) PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/BUDGERIGAR /HOKKAIDO/1/77) PVNUC_IACAL NUCLEOPROTEIN INFLUENZAA 378- VIRUS 405 (STRAIN A/CALIFORNIA /10/78) PVNUC_IACKG NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/CHICKEN/ GERMANY/N/49) PVNUC_IACKPNUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/DUCK/ AUSTRALIA/749/80) PVNUC_IADBE NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/DUCK/ BEIJING/1/78) PVNUC_IADCZ NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/DUCK/ CZECHOSLOVAKIA/56)PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/DUCK/ENGLAND/1/) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/DUCK/ ENGLAND/1/62) PVNUC_IADHK NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/DUCK /HONG KONG/7/75) PVNUC_IADM2 NUCLEOPROTEIN INFLUENZAA  37S-   VIRUS 405 (STRAIN A/DUCK/ MEMPHIS/928/74) PVNUC_IADMANUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/DUCK/ MANITOBA/1/53)PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/DUCK/NEWZEALAND/31/76) PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/DUCK/UKRAINE/2/60) PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/ENGLAND/19/55) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/FORT MONMOUTH/1/47) PVNUC_IAFOW NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/FORT WARREN/1/50) PVNUC_IAFPDNUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/FOWL PLAGUEVIRUS/DOBSON/DUTCH/27) PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK/34) PVNUC_IAGRE NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/GREY TEAL/AUSTRALIA/2/79)PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/GULL/MARYLAND/5/77) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/GULL/ MARYLAND/704/77) PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZAA 378- VIRUS 405 (STRAIN A/GULL/ MARYLAND/1124/78) PVNUC_IAGU4NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/GULL/MARYLAND/1815/79) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/GULL/ ASTRAKHAN/227/84) PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/GULL /MASSACHUSETTS/26/80) PVNUC_IAGUNNUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/GULL/MINNESOTA/94S/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/HICKOX/40) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/EQUINE/ JILLIN/1/89) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/EQUINE/ LONDON/1416/73) PVNUC_IAHMINUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/EQUINE/MIAMI/1/63)PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/HONGKONG/1/68) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A  37S-   VIRUS 405(STRAIN A/HONG KONG/5/83) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/EQUINE/PRAGUE/1/56) PVNUC_IAHTE NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/EQUINE/ TENNESSEE/5/86) PVNUC_IAKIENUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/KIEV/59/79)PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/LENINGRAD/ 54/1) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/MALLARD/ ASTRAKHAN/244/82) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZAA 378- VIRUS 405 (STRAIN A/MALLARD/ NEW YORK/6750/78) PVNUC_IAMINNUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/MINK/ SWEDEN/84)PVNUC_1ANEJ NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/NEWJERSEY/8/76) PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/NT/60/68) PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/OHIO/4/83) PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/PARROT/ULSTER/73) PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/PUERTO RICO/8/34) PVNUC_IARUD NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/RUDDY TURNSTONE/NEW JERSEY/47/85)PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SEAL/MASSACHUSETTS/1/80) PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/SHEARWATER/ AUSTRALIA/72) PVNUC_IASIN NUCLEOPROTEIN INFLUENZAA 378- VIRUS 405 (STRAIN A/SINGAPORE/1/57) PVNUC_IATEI NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/TEAL/ICELAND/29/80) PVNUC_IATKNNUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/TURKEY/MINNESOTA/1661/81) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A 378- VIRUS(STRAIN 405 A/TURKEY/ONTARIO/ 7732/66) PVNUC_IATRS NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/TERN/SOUTH AFRICA/61) PVNUC_IATRTNUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/TERN/TURKMENIA/18/72)PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/TEXAS/1/77) PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/UDORN/307/72) PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/USSR/90/77) PVNUC_IAV16 NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/VICTORIA/5/68) PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/WHALE/MAINE/328/84) PVNUC_IAWHP NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/WHALE/PACIFIC OCEAN/19/76)PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/WILSON-SMITH/33) PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/WISCONSIN/3523/88) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/SWINE/29/37) PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA A378- VIRUS 405 (STRAIN A/SWINE/41/49) PVNUC_IAZCA NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/CAMBRIDGE/1/35) PVNUC_IA2DANUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/DANDONG/9/83)PVNUC_IAZGE NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/SWINE/GERMANY/2/81) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A 378- VIRUS405 (STRAIN A/SWINE/HONG KONG/6/76) PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZAA 378- VIRUS 405 (STRAIN A/SWINE/ HONG KONG/126/82) PVNUC_IAZH4NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/ HONGKONG/127/82) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/SWINE/IOWA/15/30) PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/SWINE/IOWA/1976/31) PVNUC_IAZI3 NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/IOWA/46) PVNUC_IAZJ1NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/ITALY/437/76)PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAINA/SWINE/ITALY/2/79) PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/SWINE/ITALY/141/81) PVNUC_IAZJ4 NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/SWINE/ITALY/839/89) PVNUC_IAZJA NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/JAMESBURG/42) PVNUC_IAZMANUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/MAY/54)PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/NETHERLANDS/12/85) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/SWINE/OHIO/23/35) PVNUC_IAZON NUCLEOPROTEIN INFLUENZA A 378-VIRUS 405 (STRAIN A/SWINE/ONTARIO/2/81) PVNUC_IAZTE NUCLEOPROTEININFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/ TENNESSEE/24/77) PVNUC_IAZW1NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405 (STRAIN A/SWINE/WISCONSIN/1/57) PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A 378- VIRUS 405(STRAIN A/SWINE/ WISCONSIN/1/61) PVNUC_INCCA NUCLEOPROTEIN INFLUENZA C 99- 416- 451- VIRUS (STRAIN C/ 126 443 478 CALIFORNIA/78) PVNUC_MABVMNUCLEOPROTEIN MARBURG 366- VIRUS 407 STRAW MUSOKE) PVNUC_MABVPNUCLEOPROTEIN MARBURG 366- VIRUS 407 (STRAIN POPP) PVO01_VACCC PROTEINO1 VACCINIA  7- 109- 581- VIRUS 37 138 608 (STRAIN COPENHAGEN)PVO01_VARV PROTEIN O1 VARIOLA  7- 109- 581- VIRUS 37 138 608 PVOR1_FXMV152 KD FOXTAIL MOSAIC 1023-  PROTEIN VIRUS 1050 PVOR1_NMV 186 KDNARCISSUS MOSAIC 996- 1527-  PROTEIN VIRUS 1023 1561 PVOR1_PMV 176 KDPAPAYA MOSAIC 948- 1481-  PROTEIN POTEXVIRUS 978 1532 PVOR1_PVMR 223 KDPOTATO 597- PROTEIN VIRUS M 627 (STRAIN RUSSIAN) PVOR1_PVX 165 KD POTATO698- 1017-  PROTEIN VIRUS X 725 1044 PVOR1_PVXX3 165 KD POTATO 698-1017-  PROTEIN VIRUS X 725 1044 (STRAIN X3) PVOR1_SMYEA 150 KDSTRAWBERRY MILD 312- 691- PROTEIN YELLOW EDGE- 342 721 ASSOCIATED VIRUSPVP10_NPVAC P10 PROTEIN AUTOGRAPHA  7- CALIFORNICA 41 NUCLEARPOLYHEDROSIS VIRUS PVP10_NPVOP P10 PROTEIN ORGYIA PSEUDOTSUGATA  7-MULTICAPSID 48 POLYHEDROSIS VIRUS PVP10_NPVSE P10 PROTEIN SPODOPTERAEXIGUA  6-  37- NUCLEAR 33 64 POLYHEDROSIS VIRUS (STRAIN US) PVP10_RGDVNONSTRUCTURAL RICE GALL DWARF 205- PROTEIN PNS10 VIRUS 252 PVP10_WTVNONSTRUCTURAL WOUND TUMOR 131- 227- PROTEIN PNS10 VIRUS 181 254PVP11_RDV NONSTRUCTURAL RICE DWARF  53- PROTEIN PNS11 VIRUS 80 PVP12_WTVNONSTRUCTURAL WOUND TUMOR  81- PROTEIN PNS12 VIRUS 108 PVP18_WTVNJNONSTRUCTURAL WOUND TUMOR  81- PROTEIN VIRUS 108 PNS12 (STRAIN NJ)PVP19_AMCV CORE ARTICHOKE MOTTLED  73- PROTEIN P19 CRINKLE 100 VIRUSPVP19_TBSVC CORE TOMATO BUSHY  73- PROTEIN P19 STUNT-VIRUS 100 (STRAINCHERRY) PVP23_HSVSA PROBABLE HERPESVIRUS SAIMIRI  2- CAPSID (STRAIN II)29 PROTEIN VP23 PVP26_HSVEB CAPSID EQUINE HERPESVIRUS  36- PROTEIN TYPE1 (STRAIN AB4P) 63 VP26 PVP26_HSVSA CAPSID HERPESVIRUS SAIMIRI  48-PROTEIN (STRAIN 11) 75 VP26 PVT2_AHSV4 OUTER CAPSID AFRICAN HORSE 277-410- 632- 907- PROTEIN VP2 SICKNESS VIRUS 304 437 662 934 (SEROTYPE4/STRAIN VACCINE) PVP2_BTV13 OUTER CAPSID BLUETONGUE 815- PROTEIN VP2VIRUS 846 (SEROTYPE 13/ ISOLATE USA) PVP2_BTV1A OUTER CAPSID BLUETONGUE898- PROTEIN VP2 VIRUS 925 (SEROTYPE 1/ ISOLATE AUSTRALIA) PVP2_BTV1SOUTER CAPSID BLUETONGUE 119- PROTEIN VP2 VIRUS (SEROTYPE 146 1/ISOLATESOUTH AFRICA) PVP2_EHDVI OUTER CAPSID EPIZOOTIC HEMORRHAGIC  72- 415-PROTEIN VP2 DISEASE (SEROTYPE 1) 103 453 PVP2_ROTBR RNA-BINDING BOVINEROTAVIRUS  39- 523- PROTEIN VP2 (STRAIN RF) 94 553 PVP2_ROTBURNA-BINDING BOVINE ROTAVIRUS  39- 524- PROTEIN VP2 (STRAIN UK) 94 554PVP2_ROTHW RNA-BINDING HUMAN ROTAVIRUS  70- 533- PROTEIN VP2 (SEROTYPE1/ 101 567 STRAIN WA) PVP2_ROTPC RNA-BINDING PORCINE ROTAVIRUS  52- 128-518- 705- PROTEIN VP2 (GROUP /STRAIN 99 156 545 746 COWDEN) PVP2_ROTS1RNA-BINDING SIMIAN 11 ROTAVIRUS  36- PROTEIN VP2 (STRAIN SA11) 96PVP30_ASFE7 PHOSPHO- AFRICAN SWINE  39- PROTEIN P30 FEVER VIRUS 75(STRAIN E-75) PVP32_ASFB7 PHOSPHO- AFRICAN SWINE  39- PROTEIN P32 FEVERVIRUS 75 (STRAIN BA71V) PVP35_EBOV POLYMERASE EBOLA VIRUS  83- COMPLEX119 PROTEIN VP35 PVP35_MABVM POLYMERASE MARBURG VIRUS  80- 231- COMPLEX(STRAIN MUSOKE) 107 258 PROTEIN VP35 PVP35_MABVP POLYMERASE MARBURGVIRUS  80- 231- COMPLEX (STRAIN POPP) 107 258 PROTEIN VP35 PVP35_NPVACEARLY 35 KD AUTOGRAPHA 270- PROTEIN CALIFORNICA 297 NUCLEAR POLYHEDROSISVIRUS PVP35_NPVBM EARLY 35 KD BOMBYX MORI  68- PROTEIN NUCLEAR 102POLYHEDROSIS VIRUS PVP35_VACCV IMMUNODOM VACCINIA VIRUS 178- ENV PRO P35(STRAIN WR) 205 PVP39_NPVAC MAJOR CAPSID AUTOGRAPHA 134- 264- PROTEINCALIFORNICA 161 291 NUCLEAR POLYHEDROSIS VIRUS PVP39_NPVOP MAJOR CAPSIDORGYIA PSEUDOTSUGATA 263- PROTEIN MULTICAPSID 290 POLYHEDROSIS VIRUSPVP3_AHSV4 VP3 CORE AFRICAN HORSE 132- PROTEIN SICKNESS VIRUS 159(SEROTYPE 4/STRAIN VACCINE) PVP3_BTV10 VP3 CORE BLUETONGUE 214- PROTEINVIRUS (SEROTYPE 252 10/ISOLATE USA) PVP3_BTV17 VP3 CORE BLUETONGUE 214-PROTEIN VIRUS (SEROTYPE 252 17/ISOLATE USA) PVP3_BTV1A VP3 COREBLUETONGUE 214- PROTEIN VIRUS 252 (SEROTYPE 1/ISOLATE AUSTRALIA)PVP3_EHDV1 VP3 CORE EPIZOOTIC HEMORRHAGIC 209- 798- PROTEIN DISEASEVIRUS 243 832 (SEROTYPE 1) PVP3_EHDVA VP3 CORE EPIZOOTIC HEMORRHAGIC798- PROTEIN DISEASE 832 VIRUS (SEROTYPE 2/STRAIN AUSTRAL PVP3_GFLV P3PROTEIN GRAPEVINE FANLEAF  99- VIRUS 133 PVP3_ROTPC INNER CORE PORCINEROTAVIRUS  39- 329- PROTEIN VP3 (GROUP C/STRAIN 66 384 COWDEN)PVP3_ROTS1 INNER CORE SIMIAN 11 ROTAVIRUS  26- 350- 451- 619- PROTEINVP3 (STRAIN SA11 67 377 497 692 PVP40_EBV CAPSID EPSTEIN-BARR 440-PROTEIN P40 VIRUS 470 (STRAIN B95-8) PVP40_HSVSA CAPSID HERPESVIRUSSAIMIRI 205- 344- PROTEIN P40 (STRAIN 11) 232 372 PVP40_ILTVT CAPSIDINFECTIOUS 515- PROTEIN P40 LARYNGOTRACHEITIS 549 VIRUS (STRAIN THORNEV882) PVP40_VZVD CAPSID VARICELLA-ZOSTER 174- 495- PROTEIN P40 VIRUS 208522 (STRAIN DUMAS) PVP41_ROTS1 OUTER CAPSID SIMIAN 11 ROTAVIRUS  8- 589-PROTEIN VP4 (STRAIN SA11) 35 619 PVP42_ROTS1 OUTER CAPSID SIMIAN 11ROTAVIRUS  8- 584- PROTEIN VP4 (STRAIN SA11) 35 622 PVP4A_VACCC MAJORCORE VACCINIA  48- PROTEIN P4A VIRUS (STRAIN 75 PRECURSOR COPENHAGEN)PVP4A_VACCV MAJOR CORE VACCINIA VIRUS  48- PROTEIN P4A (STRAIN WR) 75PRECURSOR PVP4A_VARV MAJOR CORE VARIOLA VIRUS  48- PROTEIN P4A 75PRECURSOR PVP4B_FOWPV MAJOR CORE FOWLPOX VIRUS  80- PROTEIN P4B 110PRECURSOR PVP4B_VACCC MAJOR CORE VACCINIA VIRUS  7- PROTEIN P4B (STRAINCOPENHAGEN) 37 PRECURSOR PVP4B_VACCV MAJOR CORE VACCINIA VIRUS  7- P4BPRE- (STRAIN WR) 37 CURSOR PVP4B_VARV MAJOR CORE VARIOLA VIRUS  7-PROTEIN P4B 37 PRECURSOR PVP4_BTV10 VP4 CORE BLUETONGUE  34- 576-PROTEIN VIRUS (SEROTYPE 61 603 10/ISOLATE USA) PVP4_BTV11 VP4 COREBLUETONGUE VIRUS  34- 576- PROTEIN (SEROTYPE 13/ 61 603 ISOLATE USA)PVP4_BTV13 VP4 CORE BLUETONGUE VIRUS  34- 576- PROTEIN (SEROTYPE 2/ 61603 ISOLATE USA) PVP4_BTV2A OUTER CAPSID NEBRASKA CALF 552- PROTEIN VP4DIARRHEA VIRUS 622 (STRAIN NCDV-LINCOLN) PVP4_NCDV OUTER CAPSID BOVINEROTAVIRUS 595- PROTEIN VP4 (SEROTYPE 6 / 629 STRAIN B641) PVP4_ROTB4OUTER CAPSID BOVINE ROTAVIRUS  8- 584- PROTEIN VP4 (STRAIN C485) 35 622PVP4_ROTBC OUTER CAPSID BOVINE ROTAVIRUS 595- PROTEIN VP4 (STRAIN UK)629 PVP4_ROTBU OUTER CAPSID EQUINE ROTAVIRUS 112- 235- 552- PROTEIN VP4(STRAIN H-2) 146 269 629 PVP4_ROTEH OUTER CAPSID ROTAVIRUS (GROUP  5-PROTEIN VP4 B/STRAIN IDIR) 32 PVP4_ROTG1 OUTER CAPSID HUMAN ROTAVIRUS 8- 572- PROTEIN VP4 (SEROTYPE 1/ 35 628 STRAIN 1076) PVP4_ROTH1 OUTERCAPSID HUMAN ROTAVIRUS  8- 279- 565- PROTEIN VP4 (SEROTYPE 2/ 35 306 621STRAIN RV-S) PVP4_ROTH5 OUTER CAPSID HUMAN ROTAVIRUS  8- 112- 584-PROTEIN VP4 (SEROTYPE 1/ 35 139 629 STRAIN 69M) PVP4_ROTH6 OUTER CAPSIDHUMAN ROTAVIRUS  8- 279- 565- PROTEIN VP4 (SEROTYPE 1/ 35 306 621 STRAIN69M) PVP4_ROTHD OUTER CAPSID HUMAN ROTAVIRUS  8- 279- 565- PROTEIN VP4(SEROTYPE 2/ 35 306 621 STRAIN DSI) PVP4_ROTIU OUTER CAPSID HUMANROTAVIRUS  8- 111- PROTEIN VP4 (STRAIN K8) 35 138 PVP4_ROTHX OUTERCAPSID HUMAN ROTAVIRUS  8-  77- 279- 577- PROTEIN VP4 (STRAIN KU) 35 104306 621 PVP4_ROTHL OUTER CAPSID HUMAN ROTAVIRUS  8- 279- 565- PROTEINVP4 (STRAIN L26) 35 306 621 PVP4_ROTHM OUTER CAPSID HUMAN ROTAVIRUS  8-572- PROTEIN VP4 (SEROTYPE 1/ 35 610 STRAIN M37) PVP4_ROTHN OUTER CAPSIDHUMAN ROTAVIRUS  8- 573- PROTEIN VP4 (SEROTYPE 3/ 35 628 STRAIN MCN13PVP4_ROTHP OUTER CAPSID HUMAN ROTAVIRUS  8- 577- PROTEIN VP4 (SEROTYPE3/ 35 621 STRAIN P) PVP4_ROTHR OUTER CAPSID HUMAN ROTAVIRUS  8- 105-235- PROTEIN VP4 (SEROTYPE 3/ 35 135 262 STRAIN RRV) PVP4_ROTHT OUTERCAPSID HUMAN ROTAVIRUS  8- 572- PROTEIN VP4 (SEROTYPE 4/STRAIN 35 627ST. THOMAS 3) PVP4_ROTHV OUTER CAPSID HUMAN ROTAVIRUS  8- 279- 590-PROTEIN VP4 (SEROTYPE 4/ 35 306 617 STRAIN VA70) PVP4_ROTHW OUTER CAPSIDHUMAN ROTAVIRUS  8- 577- PROTEIN VP4 (SEROTYPE 1/ 35 621 STRAIN WA)PVP4_ROTP5 OUTER CAPSID PORCINE ROTAVIRUS 112- 584- PROTEIN VP4(SEROTYPE 5/ 146 625 STRAIN OSU) PVP4_ROTPC OUTER CAPSID PORCINEROTAVIRUS  5- 115- 293- PROTEIN VP4 (GROUP C/ 33 161 320 STRAIN COWDEN)PVP4_ROTPG OUTER CAPSID PORCINE ROTAVIRUS  8- 572- PROTEIN VP4 (STRAINGOTTFRIED) 35 628 PVP4_ROTPY OUTER CAPSID PORCINE ROTAVIRUS  8- 112-584- PROTEIN VP4 (STRAIN YM) 35 146 625 PVP4_ROTRH OUTER CAPSID RHESUSROTAVIRUS  8- 584- PROTEIN VP4 38 622 PVP4_ROTSF OUTER CAPSID SIMIAN 11ROTAVIRUS  8- 589- PROTEIN VP4 (STRAIN SA11-FEM) 35 619 PVP4_ROTSS OUTERCAPSID SIMIAN 11 ROTAVIRUS  8- 130- 584- PROTEIN VP4 (STRAIN SA11-SEM)35 157 622 PVP4_WTV NONSTRUCTURAL WOUND TUMOR  28- PROTEIN PNS4 VIRUS 62PVP5_AHSV4 OUTER CAPSID AFRICAN HORSE 113- 191- PROTEIN VP5 SICKNESSVIRUS 183 218 (SEROTYPE 4/ STRAIN VACCINE) PVP5_BTV10 OUTER CAPSIDBLUETONGUE  53-  99- PROTEIN VP5 VIRUS (SEROTYPE 80 126 10/ISOLATE USA)PVP5_BTV11 OUTER CAPSID BLUETONGUE  53-  92- PROTEIN VP5 VIRUS (SEROTYPE80 126 11/ISOLATE USA) PVP5_BTV13 OUTER CAPSID BLUETONGUE  53- PROTEINVP5 VIRUS (SEROTYPE 80 13/ISOLATE USA) PVP5_BTV1A OUTER CAPSIDBLUETONGUE  53-  89- PROTEIN VP5 VIRUS (SEROTYPE 80 126 1/ISOLATEAUSTRALIA) PVP5_BTV1S OUTER CAPSID BLUETONGUE  53-  92- 148- PROTEIN VP5VIRUS 80 126 182 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP5_BTV2A OUTERCAPSID BLUETONGUE  53-  89- PROTEIN VP5 VIRUS (SEROTYPE 80 126 2/ISOLATEUSA) PVP5_EHDV1 OUTER CAPSID EPIZOOTIC HEMORRHAGIC  31- 191- 399-PROTEIN VPS DISEASE 80 218 426 (SEROTYPE 1) PVPS_WTV OUTER COAT WOUNDTUMOR 648- PROTEIN P5 VIRUS 675 PVP61_BTV10 VP6 PROTEIN BLUETONGUE 161-VIRUS 193 (SEROTYPE 10/ ISOLATE USA) PVP61_MRDV PROB NONSTRUCT MAIZEROUGH DWARF 153- v41.0 KD PRO VIRUS 202 PVP61_NPVAC 61 KD AUTOGRAPHA 36- PROTEIN CALIFORNICA 63 NUCLEAR POLYHEDROSIS VIRUS PVP62_BTV10 VP6PROTEIN BLUETONGUE 157- VIRUS (SEROTYPE 189 10/ISOLATE USA) PVP64_NPVOPMAJOR ENV ORGYIA PSEUDOTSUGATA  45- GLYCOPRO MULTICAPSID 72 PRECURSORPOLYHEDROSIS VIRUS PVP67_NPVAC MAJOR ENV AUTOGRAPHA  44- GLYCOPROCALIFORNICA 81 PRECURSOR NUCLEAR POLYHEDROSIS VIRUS PVP6_BTV11 VP6PROTEIN BLUETONGUE 157- VIRUS (SEROTYPE 189 11/ISOLATE USA) PVP6_BTV13VP6 PROTEIN BLUETONGUE 157- VIRUS (SEROTYPE 189 13/ISOLATE USA)PVP6_BTV17 VP6 PROTEIN BLUETONGUE 157- VIRUS (SEROTYPE 189 17/ISOLATEUSA) PVP6_BTV1S VP6 PROTEIN BLUETONGUE 161- VIRUS (SEROTYPE 1931/ISOLATE SOUTH AFRICA) PVP6_BTV2A VP6 PROTEIN BLUETONGUE 133- VIRUS(SEROTYPE 172 2/ISOLATE USA) PVP6_RDV STRUCTURAL RICE DWARF  10- 354-PROTEIN P6 VIRUS 37 381 PVP74_NPVAC P74 PROTEIN AUTOGRAPHA 413-CALIFORNICA 440 NUCLEAR POLYHEDROSIS VIRUS PVP75_HSVSA PROBABLEHERPESVIRUS SAIMIRI 181- 929- MEMBRANE (STRAIN 11) 208 977 ANTIGEN 75PVP79_NPVAC 79 KD AUTOGRAPHA  44- 370- PROTEIN CALIFORNICA 78 397NUCLEAR POLYHEDROSIS VIRUS PVP7_EHDV1 VP7 CORE EPIZOOTIC HEMORRHAGIC 16- PROTEIN DISEASE 43 VIRUS (SEROTYPE 1) PVP7_WTV NONSTRUCTURAL WOUNDTUMOR 458- PROTEIN PNS7 VIRUS 485 PVP80_NPVAC CAPSID AUTOGRAPHA 101-240- PROTEIN P80 CALIFORNICA 142 298 NUCLEAR POLYHEDROSIS VIRUSPVP87_NPVOP CAPSID ORGYIA PSEUDOTSUGATA 132- PROTEIN P87 MULTICAPSID 159POLYHEDROSIS VIRUS PVP8_BTV10 NONSTRUCTURAL BLUETONGUE 105- PROTEIN P8VIRUS (SEROTYPE 132 10/ISOLATE USA) PVP8_FOWPV STRUCTURAL FOWLPOX 211-PROTEIN VIRUS 238 VP8 PRECURSOR PVP8_WTV OUTER CAPSID WOUND TUMOR  29-112- PROTEIN P8 VIRUS 56 143 PVP9_RDV NONSTRUCTURAL RICE DWARF 197-PROTEIN PNS9 VIRUS 224 PVP9_WTV STRUCTURAL WOUND TUMOR  22- PROTEIN MVIRUS 49 PVP9_WTVNJ STRUCTURAL WOUND TUMOR  22- PROTEIN P9 VIRUS 49(STRAIN NJ) PVPHE_NPVAC 29 KD AUTOGRAPHA 196- POLYHEDRAL CALIFORNICA 223ENVELOPE NUCLEAR PROTEIN POLYHEDROSIS VIRUS PVPHE_NPVOP 32 KD ORGYIAPSEUDOTSUGATA 127- 238- POLYHEDRAL MULTICAPSID 186 265 ENVELOPEPOLYHEDROSIS PROTEIN VIRUS PVPRT_ADEM1 ENDOPROTEASE MOUSE ADENOVIRUS167- TYPE 1 194 PVPU_HV1A2 VPU PROTEIN HUMAN IMMUNO-  3- DEFICIENCY 31VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNO-  5-DEFICIENCY 48 VIRUS TYPE 1 (BH10 AND HXB3 ISOLATES) PVPU_HV1B8 VPUPROTEIN HUMAN IMMUNO-  21- DEFICIENCY 48 VIRUS TYPE 1 (B118 ISOLATE)PVPU_HV1BN VPU PROTEIN HUMAN IMMUNO-  22- DEFICIENCY 49 VIRUS TYPE 1(BRAIN ISOLATE) PVPU_HV1BR VPU PROTEIN HUMAN IMMUNO-  5- DEFICIENCY 48VIRUS TYPE 1 (DRU ISOLATE) PVPU_HV1C4 VPU PROTEIN HUMAN IMMUNO-  3-DEFICIENCY 30 VIRUS TYPE 1 (CDC-451 ISOLATE) PVPU_HV1EL VPU PROTEINHUMAN IMMUNO-  6- DEFICIENCY 33 VIRUS TYPE 1 (EL1 ISOLATE) PVPU_HV1H2VPU PROTEIN HUMAN IMMUNO-  5- DEFICIENCY 48 VIRUS TYPE 1 (HXB2 ISOLATE)PVPU_HV1J3 VPU PROTEIN HUMAN IMMUNO-  2- DEFICIENCY 29 VIRUS TYPE 1 (JH3ISOLATE) PVPU_HV1JR VPU PROTEIN HUMAN IMMUNO-  22- DEFICIENCY 49 VIRUSTYPE 1 (JRCSF ISOLATE) PVPU_HV1MA VPU PROTEIN HUMAN IMMUNO-  5-DEFICIENCY 32 VIRUS TYPE 1 (MAL ISOLATE) PVPU_HV1ND VPU PROTEIN HUMANIMMUNO-  6- DEFICIENCY 33 VIRUS TYPE 1 (NDK ISOLATE) PVPU_HV1PV VPUPROTEIN HUMAN IMMUNO-  5- DEFICIENCY 48 VIRUS TYPE 1 (PV22 ISOLATE)PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNO-  22- DEFICIENCY 49 VIRUS TYPE 1(SF162 ISOLATE) PVPU_SIVCZ VPU PROTEIN CHIMPANZEE  51- IMMUNODEFICIENCY78 VIRUS PVPX_LDV VPX PROTEIN LACTATE DEHYDRO-  64- GENASE-ELEVATING 94VIRUS PVRNA_BSMV ALPHA-A PROTEIN BARLEY STRIPE 1051-  MOSAIC VIRUS 1078PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS  6- (GROUP 13 C/STRAINSHINTOKU) PVS06_ROTGA VP6 PROTEIN ROTAVIRUS 114- (GROUP B/STRAIN ADRV)144 PVS06_ROTG1 VP6 PROTEIN ROTAVIRUS  28- (CROUP B/STRAIN IDIR) 55PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS  9- 44 PVS06_ROTPC VP6 PROTEINPORCINE ROTAVIRUS  9- (GROUP C/STRAIN 44 COWDEN) PVS07_ROTBJGLYCOPROTEIN BOVINE ROTAVIRUS  2- VP7 (STRAIN KN-4) 29 PVS07_ROTBUNONSTRUCTURAL BOVINE ROTAVIRUS  91- 199- PROTEIN NCVP3 (STRAIN UK) 146236 PVS07_ROTP5 NONSTRUCTURAL PORCINE ROTAVIRUS  91- 202- PROTEIN NCVP3(SEROTYPE 5/STRAIN 146 236 OSU) PVS07_ROTS1 NONSTRUCTURAL SIMIAN 11ROTAVIRUS  91- 199- PROTEIN NCVP3 (STRAIN SA11) 146 236 PVS08_ROTBUNONSTRUCTURAL BOVINE ROTAVIRUS 164- PROTEIN (STRAIN UK) 201 NS2/VP9PVS08_ROTS1 NONSTRUCTURAL SIMIAN 11 ROTAVIRUS 164- 217- PROTEIN NCVP4(STRAIN SA11) 201 251 PVS09_ROTB4 GLYCO- BOVINE ROTAVIRUS  2- PROTEINVP7 (SEROTYPE 6 29 /STRAIN B641) PVS09_ROTB5 GLYCO- BOVINE ROTAVIRUS  2-PROTEIN VP7 (STRAIN A5) 29 PVS09_ROTBU GLYCO- BOVINE ROTAVIRUS  2-PROTEIN VP7 (STRAIN UK) 29 PVS09_ROTGA GLYCO- ROTAVIRUS 210- PROTEIN VP7(GROUP B/ 237 PRECURSOR STRAIN ADRV) PVS09_ROTH4 GLYCO- HUMAN ROTAVIRUS 2- PROTEIN VP7 (SEROTYPE 4/ 29 STRAIN RV-4) PVS09_ROTHA GLYCO- HUMANROTAVIRUS  2- PROTEIN VP7 (SEROTYPE 2/ 29 STRAIN HU5) PVS09_ROTHB GLYCO-HUMAN ROTAVIRUS  2- PROTEIN VP7 (SEROTYPE G/ 29 STRAIN B37) PVS09_ROTHDGLYCO- HUMAN ROTAVIRUS  2- PROTEIN VP7 (SEROTYPE 2/ 29 STRAIN DS1)PVS09_ROTHH GLYCO- HUMAN ROTAVIRUS  2- PROTEIN VP7 (SEROTYPE 2/ 29STRAIN HN126) PVS09_ROTHM GLYCO- HUMAN ROTAVIRUS  2- PROTEIN VP7(SEROTYPE 1/ 29 STRAIN M37) PVS09_ROTHO GLYCO- HUMAN ROTAVIRUS  2-PROTEIN VP7 (SEROTYPE 1/ 29 STRAIN MO AND STRAIN D) PVS09_ROTHP GLYCO-HUMAN ROTAVIRUS  2- PROTEIN VP7 (SEROTYPE 3/ 29 STRAIN P) PVS09_ROTHSGLYCO- HUMAN ROTAVIRUS  2- PROTEIN VP7 (SEROTYPE 2/ 29 STRAIN S2)PVS09_ROTHW GLYCO- HUMAN ROTAVIRUS  2- PROTEIN VP7 (SEROTYPE 1/ 29STRAIN WA) PVS09_ROTP2 GLYCO- PORCINE ROTAVIRUS  2- PROTEIN VP7(SEROTYPE 3/ 29 STRAIN AT/76) PVS09_ROTP3 GLYCO- PORCINE ROTAVIRUS  2-PROTEIN VP7 (SEROTYPE 3/ 29 STRAIN CRW-8) PVS09_ROTS1 GLYCO- SIMIAN 11ROTAVIRUS  2- PROTEIN VP7 (STRAIN SA11) 29 PVS10_ROTBS MINOR OUTERBOVINE ROTAVIRUS 125- CAPSID (GROUP C/STRAIN 152 PROTEIN SHINTOKU)PVS10_ROTS1 NONSTRUCTURAL SIMIAN 11 113- GLYCOPROTEIN ROTAVIRUS 140NCVP5 (STRAIN SA11) PVS11_ROTBU MINOR OUTER BOVINE ROTAVIRUS  13- 114-CAPSID (STRAIN UK) 40 145 PROTEIN PVS11_ROTBV MINOR OUTER BOVINEROTAVIRUS  13- 114- CAPSID (STRAIN VMRI) 40 145 PROTEIN PVS11_ROTGANONSTRUCTURAL ROTAVIRUS (GROUP  31- PROTEIN B/STRAIN ADRV) (ADULT 60DIARRHEA ROTAVIRUS) PVS11_ROTH5 MINOR OUTER HUMAN ROTAVIRUS  13- 111-CAPSID (SEROTYPE 2/ 40 145 PROTEIN STRAIN RV-5) PVS11_ROTHD MINOR OUTERHUMAN ROTAVIRUS  13- 111- CAPSID (SEROTYPE 2/ 40 145 PROTEIN STRAIN DS1)PVS11_ROTHW MINOR OUTER HUMAN ROTAVIRUS 111- CAPSID (SEROTYPE 1/ 145PROTEIN STRAIN WA) PVS11_ROTRA MINOR OUTER RABBIT ROTAVIRUS 118- CAPSID(STRAIN ALABAMA) 145 PROTEIN PVS11_ROTS1 MINOR OUTER SIMIAN 11 ROTAVIRUS111- CAPSID (STRAIN SA11) 146 PROTEIN PVSH_MUMP1 SMALL MUMPS  9-HYDROPHOBIC VIRUS 46 PROTEIN PVSH_MUMPA SMALL MUMPS VIRUS  12-HYDROPHOBIC (STRAIN MATSUYAMA) 41 PROTEIN PVSH_MUMPB SMALL MUMPS VIRUS 9- HYDROPHOBIC (STRAIN BELFAST) 41 PROTEIN PVSH_MUMPE SMALL MUMPS VIRUS 9- HYDROPHOBIC (STRAIN ENDERS) 46 PROTEIN PVSH_MUMPJ SMALL MUMPS VIRUS 9- HYDROPHOBIC (STRAIN JERYL-LYNN) 46 PROTEIN PVSH_MUMPK SMALL MUMPSVIRUS  9- HYDROPHOBIC (STRAIN KILHAM) 46 PROTEIN PVSH_MUMPL SMALL MUMPSVIRUS  9- HYDROPHOBIC (STRAIN BRISTOL 1) 46 PROTEIN PVSH_MUMPM SMALLMUMPS VIRUS  12- HYDROPHOBIC (STRAIN 41 PROTEIN MIYAHARA VACCINE)PVSH_MUMPR SMALL MUMPS VIRUS  9- HYDROPHOBIC (STRAIN RW) 41 PROTEINPVSH_MUMPU SMALL MUMPS VIRUS  12- HYDROPHOBIC (STRAIN URABE 41 PROTEINVACCINE AM9) PVS11_REOVD SIGMA 1 REOVIRUS (TYPE 3/  26-  71- 127- 222-PROTEIN STRAIN DEARING) 63 122 168 259 PRECURSOR PVS11_REOVJ SIGMA 1REOVIRUS (TYPE  4- 130- PROTEIN 2/STRAIN D5/JONES) 104 193 PRECURSORPVS11_REOVL SIGMA 1 REOVIRUS (TYPE  4-  75- 112- PROTEIN 1/STRAIN LANG)52 104 160 PRECURSOR PVS12_REOVD SIGMA 2 REOVIRUS (TYPE 350- PROTEIN3/STRAIN DEARING) 384 PVS13_REOVJ SIGMA 2 REOVIRUS (TYPE 289- PROTEIN2/STRAIN D5/JONES) 316 PVS15_REOVD SIGMA 1-S REOVIRUS (TYPE 3/  90-PROTEIN STRAIN DEARING) 117 PVS15_REOVL SIGMA 1-S REOVIRUS (TYPE  50-PROTEIN 1/STRAIN LANG) 77 PVT3A_CAPV1 PROTEIN T3A CAPRIPOXVIRUS 124-(STRAIN INS-1) 158 PVT5_SFVKA PROTEIN T5 SHOPE FIBROMA 250- VIRUS 277(STRAIN KASZA) PVTER_EBV PROBABLE DNA EPSTEIN-BARR 234- PACKAGING VIRUS(STRAIN B95-8) 290 PROTEIN PVTER_HCMVA PROBABLE DNA HUMAN 417- PACKAGINGCYTOMEGALOVIRUS 451 PROTEIN (STRAIN AD169) PVTER_HSV6U PROBABLE DNAHERPES SIMPLEX 176- PACKAGING VIRUS 203 PROTEIN (TYPE 6/STRAINUGANDA-1102) PVTER_HSV11 PROBABLE DNA ICTALURID 710- PACKAGINGHERPESVIRUS 1 737 PROTEIN PVTER_VZVD PROBABLE DNA VARICELLA-ZOSTER 394-PACKAGING VIRUS 421 PROTEIN (STRAIN DUMAS) PVTP3_TTV1V VIRALTHERMOPROTEUS TENAX 169- PROTEIN TPX VIRUS 1 (STRAIN VT3) 196 PVTPX_TTV1VIRAL THERMOPROTEUS TENAX 169- PROTEIN TPX VIRUS 1 (STRAIN KRA1) 196PVV_PI4HA V PROTEIN HUMAN PARAINFLUENZA  4- 4A VIRUS 38 (STRAIN TOSHIBA)PY101_SSVI HYPOTHETICAL SULFOLOBUS  25- 10.1 KD VIRUS-LIKE 65 PROTEINPARTICLE SSVI PY108_SSVI HYPOTHETICAL SULFOLOBUS  4- 10.8 KD VIRUS-LIKE61 PROTEIN PARTICLE SSVI PY119_SSVI HYPOTHETICAL SULFOLOBUS  30- 11.9 KDVIRUS-LIKE 78 PROTEIN PARTICLE SSVI PY11K_TYDVA HYPOTHETICAL TOBACCOYELLOW  53- 11.2 KD DWARF 87 PROTEIN VIRUS (STRAIN AUSTRALIA)PY13K_NPVAC HYPOTH 13.1 KD AUTOGRAPHA  85- IN 39 KD CALIFORNICA 1125′REGION NUCLEAR POLYHEDROSIS VIRUS PY13K_SSVI HYPOTHETICAL SULFOLOBUS 59- 13.2 KD VIRUS-LIKE 86 PROTEIN PARTICLE SSVI PY14K_SSVI HYPOTHETICALSULFOLOBUS  5- 13.7 KD VIRUS-LIKE 39 PROTEIN PARTICLE SSVI PY16K_NPVACHYPOTH IN AUTOGRAPHA  80- 39 KD CALIFORNICA 107 PROTEIN NUCLEAR 5′REGIONPOLYHEDROSIS VIRUS PY16K_SSVI HYPOTHETICAL SULFOLOBUS  77- 15.6 KDVIRUS-LIKE 111 PROTEIN PARTICLE SSVI PY17K_SSVI HYPOTHETICAL SULFOLOBUS 9- 119- 17.1 KD VIRUS-LIKE 36 153 PROTEIN PARTICLE SSVI PY18K_MSVNHYPOTHETICAL MAIZE STREAK  34- 17.7 KD VIRUS 61 PROTEIN (NIGERIANISOLATE) PY18K_MSVS HYPOTHETICAL MAIZE STREAK  34- 17.2 KD VIRUS 61PROTEIN (SOUTH-AFRICAN ISOLATE) PY20K_SSVI HYPOTHETICAL SULFOLOBUS  76-20.4 KD VIRUS-LIKE 103 PROTEIN PARTICLE SSVI PY28K_SSVI HYPOTHETICALSULFOLOBUS  93- 28.5 KD VIRUS-LIKE 164 PROTEIN PARTICLE SSVI PY2_SOCMVHYPOTHETICAL SOYBEAN CHLOROTIC 118- PROTEIN 1 MOTTLE VIRUS 148PY31K_SSVI HYPOTHETICAL SULFOLOBUS  24- 31.5 KD VIRUS-LIKE 97 PROTEINPARTICLE SSVI PY32K_SSVI HYPOTHETICAL SULFOLOBUS 233- 31.7 KD VIRUS-LIKE267 PROTEIN PARTICLE SSVI PY38K_NPVAC HYPOTHETICAL AUTOGRAPHA 133- 37.7KD CALIFORNICA 184 PROTEIN NUCLEAR POLYHEDROSIS VIRUS PY3_SOCMVHYPOTHETICAL SOYBEAN CHLOROTIC 122- PROTEIN 3 MOTTLE VIRUS 149 PY7_SOCMVHYPOTHETICAL SOYBEAN CHLOROTIC  56- PROTEIN 7 MOTTLE 94 VIRUS PY85K_SSVIHYPOTHETICAL SULFOLOBUS  81- 546- 658- 85.7 KD VIRUS-LIKE 121 573 700PROTEIN PARTICLE SSVI PY8_SOCMV HYPOTHETICAL SOYBEAN CHLOROTIC  13-PROTEIN 8 MOTTLE 40 VIRUS PYB01_FOWTM HYPOTHETICAL FOWLPOX  74- 152-184- BAMHI-ORF1 VIRUS (ISOLATE 108 179 218 PROTEIN HP-438[MUNICH])PYB05_FOWPM HYPOTHETICAL FOWLPOX  62- BAMHI-ORF5 VIRUS (ISOLATE 89PROTEIN HP-438[MUNICH]) PYB10_FOWPM HYPOTHETICAL FOWLPOX 162- 214-BAMHI-ORF10 VIRUS (ISOLATE 197 241 PROTEIN HP-438[MUNICH]) PYB12_FOWPMHYPOTHETICAL FOWLPOX  11- BAMHI-ORF12 VIRUS (ISOLATE 38 PROTEINHP-438[MUNICH]) PYB13_FOWPM HYPOTHETICAL FOWLPOX 128- BAMHI-ORF13 VIRUS(ISOLATE 167 PROTEIN HP-438[MUNICH]) PYBL3_FOAMV BEL-3 HUMAN  87-PROTEIN SPUMARETROVIRUS 116 PYDH1_HSVS7 HYPOTH 24.1 HERPESVIRUS SAIMIRI161- KD IN DHFR (STRAIN 484-77) 188 3′REGION PYDH1_HSVSC HYPOTH 28.7HERPESVIRUS SAIMIRI  52- KD IN DHFR (SUBGROUP 82 3′REGION C/STRAIN 488)PYDH4_HSVSC HYPOTH 9.9 KD HERPESVIRUS SAIMIRI  53- IN DHFR (SUBGROUPC/STRAIN 83 3′REGION 488) PYF26_FOWP1 HYPOTHETICAL FOWLPOX  8- 25.9 KDVIRUS 35 PROTEIN (STRAIN FP-1) PYF30_FOWP1 HYPOTHETICAL FOWLPOX 170-30.9 KD VIRUS 204 PROTEIN (STRAIN FP-1) PYH22_VACCV HYPOTH 21.7 KDVACCINIA  37-  95- 144- HINDIII-C PRO VIRUS 64 126 171 (STRAIN WR)PYHR3_VACCV HYPOTH HOST VACCINIA  31- 179- RANGE 27.4 VIRUS 58 206 KDPRO (STRAIN WR) PYKR2_EBV HYPOTHETICAL EPSTEIN-BARR  90- BKRF2 PROTEINVIRUS 121 (STRAIN B95-8) PYKR4_EBV HYPOTHETICAL EPSTEIN-BARR  19- BKRF4PROTEIN VIRUS 53 (STRAIN B95-8) PYL15_ADE41 HYPOTH 12.4 HUMAN ADENOVIRUS 47- KD IN 33 KD TYPE 41 86 REGION PYLR3_EBV HYPOTHETICAL EPSTEIN-BARR 27- BLRF3 PROTEIN VIRUS 54 (STRAIN B95-8) PYOR1_COYMV HYPOTHETICALCOMMELINA YELLOW  94- 23 KD MOTTLE 143 PROTEIN VIRUS PYOR2_COYMVHYPOTHETICAL COMMELINA YELLOW  35- 15 KD MOTTLE 76 PROTEIN VIRUSPYOR3_WCMVM HYPOTHETICAL WHITE CLOVER MOSAIC  64- 13 KD VIRUS (STRAIN M)94 PROTEIN PYOR3_WCMVO HYPOTHETICAL WHITE CLOVER MOSAIC  65- 13 KD VIRUS(STRAIN O) 95 PROTEIN PYOR5_ADEG1 HYPOTHETICAL AVIAN ADENOVIRUS GAL1 92- 31.5 KD (STRAIN PHELPS) 119 PROTEIN PYORA_TTV1 HYPOTHETICALTHERMOPROTEUS TENAX  23- 8.1 KD VIRUS 1 (STRAIN KRA1) 57 PROTEINPYORL_TTV1 HYPOTHETICAL THERMOPROTEUS TENAX  15- 26.8 KD VIRUS 1 (STRAINKRA1) 42 PROTEIN PYORQ_TTV1 HYPOTHETICAL THERMOPROTEUS TENAX  3- 7.3 KDVIRUS 1 (STRAIN KRA1) 31 PROTEIN PYORW_TTV1 HYPOTHETICAL THERMOPROTEUSTENAX  4- 12.1 KD VIRUS 1 (STRAIN KRA1) 10 PROTEIN PYP12_RTBVHYPOTHETICAL RICE TUNGRO  44- P12 PROTEIN BACILLIFORM 71 VIRUSPYP12_RTBVP HYPOTHETICAL RICE TUNGRO  44- P12 PROTEIN BACILLIFORM 71VIRUS (ISOLATE PHILIPPINES) PYP24_RTBV HYPOTHETICAL RICE TUNGRO  59-106- P24 PROTEIN BACILLIFORM 101 157 VIRUS PYP24_RTBVP HYPOTHETICAL RICETUNGRO  51- 106- P24 PROTEIN BACILLIFORM 101 157 VIRUS (ISOLATEPHILIPPINES) PYP46_RTBV HYPOTHETICAL RICE TUNGRO  58- 197- P46 PROTEINBACILLIFORM 107 231 VIRUS PYP46_RTBVP HYPOTHETICAL RICE TUNGRO  58- 197-P46 PROTEIN BACILLIFORM 107 231 VIRUS (ISOLATE PHILIPPINES) PYP63_NPVACHYPOTH PRO AUTOGRAPHA  44- P6.5 CALIFORNICA 71 5′REGION NUCLEARPOLYHEDROSIS VIRUS PYP63_NPVOP HYPOTH 40.0 ORGYIA PSEUDOTSUGATA 325- KDIN P6.5 MULTICAPSID 352 5′REGION POLYHEDROSIS VIRUS PYPOH_NPVAC HYPOTH23.6 AUTOGRAPHA 116- KD IN CALIFORNICA 153 POLYHEDRIN NUCLEAR 5′REGIOPOLYHEDROSIS VIRUS PYPOL_IPNVN HYPOTHETICAL INFECTIOUS PANCREATIC  5-17.0 KD NECROSIS 32 PROTEIN VIRUS (STRAIN N1) PYQ3_AMEPV HYPOTHETICALAMSACTA MOOREI  8-  59- 156- PROTEIN IN TK ENTOMOPOXVIRUS 57 96 1833′REGION PYRF1_HSV60 HYPOTHETICAL HERPES SIMPLEX 208- PROTEIN RT1 VIRUS235 (TYPE 6/STRAIN GS) PYRF2_HSV6G HYPOTHETICAL HERPES SIMPLEX 223- 268-PROTEIN RF2 VIRUS 257 299 (TYPE 6/STRAIN GS) PYRF3_HSV6O HYPOTHETICALHERPES SIMPLEX 141- PROTEIN RF3 VIRUS 168 (TYPE 6/STRAIN GS) PYRF4_HSV60HYPOTHETICAL HERPES SIMPLEX 404- PROTEIN RF4 VIRUS 441 (TYPE 6/STRAINGS) PYRP2_IRV6 REPETITIVE CHILO IRIDESCENT  10- PROTEIN ORF2 VIRUS 45PYVAG_VACCC HYPOTHETICAL VACCINIA  7- 9.3 KD VIRUS (STRAIN 34 PROTEINCOPENHAGEN) PYVAH_VACCC HYPOTHETICAL 14.5 VACCINIA  81- KD VIRUS (STRAIN112 PROTEIN COPENHAGEN) PYVDB_VACCC HYPOTHETICAL VACCINIA  29- 8.5 KDVIRUS (STRAIN 77 PROTEIN COPENHAGEN) PYVDB_VACCV HYPOTHETICAL VACCINIA 46- 8.5 KD VIRUS 77 PROTEIN (STRAIN WR) PYVDH_VACCV HYPOTHETICALVACCINIA  20- 7.2 KD VIRUS 50 PROTEIN (STRAIN WR) PYVGB_VACCCHYPOTHETICAL VACCINIA  10- 8.4 KD VIRUS (STRAIN 44 PROTEIN COPENHAGEN)PYZL2_EBV HYPOTHETICAL EPSTEIN-BARR 152- BZLF2 PROTEIN VIRUS 179 (STRAINB95-8)

TABLE VII 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY (PREFERRED VIRALSEQUENCES) PC GENE 107 × 178 × 4 All Viruses (no bacteriophages)FILENAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7AREA 8 AREA 9 PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453–480 PENV_MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 517– 544PPOL_MLVAV POL POLYPROTEIN AXV MURINE LEUKEMIA VIRUS 805– 832 PMYC_AVIM2MYC TRANSFORMING AVIAN MYELOCYTOMATOSIS 232– 375– PROTEIN VIRUS CM11 266402 PMYC_AVIMD MYC TRANSFORMING AVIAN MYELOCYTOMATOSIS 233– 376– PROTEINVIRUS HBI 267 403 PMYC_AVIMC MYC TRANSFORMING AVIAN MYELOCYTOMATOSIS233– 376– PROTEIN VIRUS MC29 267 403 VL1_FPVL PROBABLE L1 AVIANPAPILLOMA VIRUS EBV-L  38– PROTEIN 65 PVGLB_HSVB1 GLYCOPROTEIN 1 BOVINEHERPESVIRUS TYPE 1 427– PRECURSOR 454 PRIR2_HSVB3 RIBONUC-DIPHOSPHBOVINE HERPESVIRUS TYPE 1  90– REDUCT SMALL CHA (STRAIN 34) 117PVGLB_HSVB2 GLYCOPROTEIN B-1 BOVINE HERPESVIRUS TYPE 2 447– PRECURSOR(STRAIN BMV) 474 PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCYVIRUS  17– 544– 631– (ISOLATE 106) 44 603 695 PENV_BIV27 ENV POLYPROTEINBOVINE IMMUNODEFICIENCY VIRUS  17– 573– 660– (ISOLATE 127) 44 632 724PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AMERICAN 304– ISOLATEFLK) 377 PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AMERICAN 304–ISOLATE VDM) 377 PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS(AUSTRALIAN 304– ISOLATE) 377 PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIAVIRUS (BELGIUM 311– ISOLATE LD285) 377 PENV_BLVB5 ENV POLYPROTEIN BOVINELEUKEMIA VIRUS (BELGIUM 304– ISOLATE LB59) 377 PENV_BLVJ ENV POLYPROTEINBOVINE LEUKEMIA VIRUS (JAPANESE 304– ISOLATE BLV-1) 377 PHEMA_P13BHEMAGGLUTININ- BOVINE PARAINFLUENZA 3 VIRUS  66– NEURAMINIDASC 93PRRPP_P13B RNA POLYMERASE BOVINE PARAINFLUENZA 3 VIRUS  34– 255– 285–ALPHA SUBUNIT 91 282 314 PVGLF_P13B FUSION BOVINE PARAINFLUENZA 3 VIRUS115– 207– 459– GLYCOPROTEIN 182 241 497 PRECURSOR PVMAT_P13B MATRIXPROTEIN BOVINE PARAINFLUENZA 3 VIRUS 201– 231 PRRPP_BRSVA RNA POLYMERASEBOVINE RESPIRATORY SYNCYTIAL  99– ALPHA SUBUNIT VIRUS (STRAIN A51908)133 PVGLF_BRSVA FUSION BOVINE RESPIRATORY SYNCYTIAL  38– 154– 216– 442–486– GLYCOPROTEIN VIRUS (STRAIN A51908) 65 202 243 469 531 PRECURSORPVMA2_BRSVA MATRIX BOVINE RESPIRATORY SYNCYTIAL 124– GLYCOPROTEIN VIRUS(STRAIN A51908) 152 M2 PVMAT_BRSVA MATRIX PROTEIN BOVINE RESPIRATORYSYNCYTIAL 219– VIRUS (STRAIN A51908) 246 PVGLF_BRSVC FUSION BOVINERESPIRATORY SYNCYTIAL  38– 154– 216– 444– 488– GLYCOPROTEIN VIRUS(STRAIN COPENHAGEN) 65 202 243 471 533 PRECURSOR PVGLG_BRSVC MAJORSURFACE BOVINE RESPIRATORY SYNCYTIAL  92– GLYCOPROTEIN G VIRUS (STRAINCOPENHAGEN) 123 PVGLF_BRSVR FUSION BOVINE RESPIRATORY SYNCYTIAL  38–154– 216– 444– 488– GLYCOPROTEIN VIRUS (STRAIN RB94) 65 202 243 471 533PRECURSOR PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA VIRUS 510–539 PENV_SIVCZ ENV POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY 160– 253–336– 526– 627– VIRUS 187 289 366 584 654 PVPU_SIVCZ VPU PROTEINCHIMPANZEE IMMUNODEFICIENCY  51– VIRUS 78 PPOL_SIVCZ POL POLYPROTEINCHIMPANZEE IMMUNODEFICIENCY 242– 626– VIRUS (SIV(CP2)) 269 685PVE2_CRPVK PROBABLE E2 COTTONTAIL RABBIT (SHOPE)  5– PROTEIN PAPILLOMAVIRUS (STRAIN KANSAS) 34 VL1_CRPVK PROBABLE L1 COTTONTAIL RABBIT (SHOPE)331– PROTEIN PAPILLOMA VIRUS (STRAIN KANSAS) 383 PPOLG_DEN1S GENOMEDENGUE VIRUS TYPE 1 (STRAIN 1858–  2890–  2989–  POLYPROTEIN SINGAPORE5273/90) 1885 2935 3016 PPOLG_DEN26 GENOME DENGUE VIRUS TYPE 2 (STRAIN16681) 1544–  1858–  2908–  2982–  3117–  POLYPROTEIN 1571 1885 29353016 3147 PPOLG_DEN27 GENOME DENGUE VIRUS TYPE 2 (STRAIN 1544–  1858– 2485–  2908–  2982–  3117– POLYPROTEIN 16681-PDK53) 1571 1885 2519 29353016 3147 PPOLG_DEN2J GENOME DENGUE VIRUS TYPE 2 (STRAIN 1544–  1858– 2908–  3117–  3346–  POLYPROTEIN JAMAICA) 1571 1885 2935 3147 3373PPOLG_DEN2P GENOME DENGUE VIRUS TYPE 2 (STRAIN 1544–  1858–  2905– 2979–  3114–  3343– POLYPROTEIN PR159/S1) 1571 1885 2932 3013 3144 3370PPOLG_DEN2T GENOME DENGUE VIRUS TYPE 2 (STRAIN 1134–  1448–  POLYPROTEINTONGA 1974) 1161 1475 PPOLG_DEN3 GENOME DENGUE VIRUS TYPE 3 837– 1542– 1857–  2494–  2980–  3345– POLYPROTEIN 864 1569 1884 2521 3014 3372PPOLG_DEN4 GENOME DENGUE VIRUS TYPE 4 2885–  2977–  3342–  POLYPROTEIN2930 3011 3369 PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS (BROWN 5– SHANGHAI DUCK ISOLATE S5) 39 PDPOL_HPBDC DNA POLYMERASE DUCKHEPATITIS B VIRUS (STRAIN  5– CHINA) 39 PDPOL_HPBDW DNA POLYMERASE DUCKHEPATITIS B VIRUS (WHITE  5– 304– SHANGHAI DUCK ISOLATE S31) 39 331PTEGU_EBV LARGE TEGUMENT EPSTEIN-BARR VIRUS (STRAIN B95-8) 145– 1215– 1344–  1876–  PROTEIN 172 1242 1371 1903 PUL06_EBV VIRION PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 115– 313– 542– BBRF1 142 340 569PUL11_EBV HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN B95-8)  15– PROTEIN 42BBLF1 PUL52_EBV PROB DNA EPSTEIN-BARR VIRUS (STRAIN B95-8) 185– 487–REPLICATION 212 814 PROTEIN BSLF1 PUL87_EBV HYPOTHETICAL EPSTEIN-BARRVIRUS (STRAIN B95-8) 409– PROTEIN 436 B(C)RF1 PUL92_EBV HYPOTHETICALEPSTEIN-BARR VIRUS (STRAIN B95-8) 107– 168– PROTEIN BDLF4 144 196PVCAP_EBV MAJOR CAPSID EPSTEIN-BARR VIRUS (STRAIN B95-8) 847– PROTEIN874 PVGL2_EBV PROBABLE EPSTEIN-BARR VIRUS (STRAIN B95-8)  68– MEMBRANE102 GLYCOPROTEIN PVGLB_EBV GLYCOPROTEIN EPSTEIN-BARR VIRUS (STRAINB95-8)  95– 631– GP110 122 658 PRECURSOR PVGLH_EBV GLYCOPROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 549– 619– GP85 576 648 PRECURSORPVGP8_EBV PROBABLE EPSTEIN-BARR VIRUS (STRAIN B95-8) 104– MEMBRANE 149ANTIGEN GP85 PVP40_EBV CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)440– P40 470 PVTER_EBV PROBABLE DNA EPSTEIN-BARR VIRUS (STRAIN B95-8)234– PACKAGING 290 PROTEIN PYKR2_EBV HYPOTHETICAL EPSTEIN-BARR VIRUS(STRAIN B95-8)  90– BKRF2 PROTEIN 121 PYKR4_EBV HYPOTHETICALEPSTEIN-BARR VIRUS (STRAIN B95-8)  19– BKRF4 PROTEIN 53 PYLR3_EBVHYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN B95-8)  27– BLRF3 PROTEIN 54PYZL2_EBV HYPOTHETICAL EPSTEIN-BARR VIRUS (STRAIN B95-8) 152– BZLF2PROTEIN 179 PBZLF_EBV BZLF1 TRANS- EPSTEIN-BARR VIRUS (STRAIN B95-8)193– ACTIVATOR 220 PROTEIN PDNB1_EBV MAJOR DNA- EPSTEIN-BARR VIRUS(STRAIN B95-8) 977– 1041–  BINDING 1004 1068 PROTEIN PEAR_EBV EARLYANTIGEN EPSTEIN-BARR VIRUS (STRAIN B95-8)  55– PROTEIN R 82 PLMP1_EBVLATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8) 148– PROTEIN 1 175PLMP2_EBV GENE TERMINAL EPSTEIN-BARR VIRUS (STRAIN B95-8) 294– PROTEIN321 PLMP1_EBVC LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN CAO) 148–PROTEIN 1 175 PLMP1_EBVR LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAINRAJI) 148– PROTEIN 1 175 PUL32_HSVEB MAJOR ENVELOPE EQUINE HERPESVIRUSTYPE 1 345– GLYCOPROTEIN 375 300 PVGLC_HSVEB GLYCOPROTEIN C EQUINEHERPESVIRUS TYPE 1 124– PRECURSOR 151 PVGLB_HSVE1 GLYCOPROTEIN EQUINEHERPESVIRUS TYPE 1 443– 934– B PRECURSOR (ISOLATE HVS25A) 470 961PVGLB_HSVEA GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 443– 934– PRECURSOR(STRAIN AB1) 470 961 PAT12_HSVEB ALPHA TRANS-IND EQUINE HERPESVIRUS TYPE1 294– FACTOR 82 KD (STRAIN AB4P) 321 PRO PATIN_HSVEB ALPHA TRANS-INDEQUINE HERPESVIRUS TYPE 1 255– PROTEIN (STRAIN AB4P) 289 PHEL1_HSVEBPROBABLE EQUINE HERPESVIRUS TYPE 1 184– 321– HELICASE (STRAIN AB4P) 211348 PRIR1_HSVEB RIBONUC- EQUINE HERPESVIRUS TYPE 1  75– DIPHOSPH REDUCT(STRAIN AB4P) 102 LARGE CHA PTEGU_HSVEB LARGE TEGUMENT EQUINEHERPESVIRUS TYPE 1 229– 566– 1205–  PROTEIN (STRAIN AB4P) 256 593 1232PUL06_HSVEB VIRION GENE 36 EQUINE HERPESVIRUS TYPE 1 640– PROTEIN(STRAIN AB4P) 667 PUL14_HSVEB HYPOTHETICAL EQUINE HERPESVIRUS TYPE 1247– GENE 48 PROTEIN (STRAIN AB4P) 286 PUL21_HSVEB GENE 40 PROTEINEQUINE HERPESVIRUS TYPE 1  44– (STRAIN AB4P) 71 PUL37_HSVEB GENE 23PROTEIN EQUINE HERPESVIRUS TYPE 1 715– 987– (STRAIN AB4P) 749 1014PUL52_HSVEB DNA REPLICATION EQUINE HERPESVIRUS TYPE 1 193– 943– PROTEINUL52 (STRAIN AB4P) 220 970 PVG03_HSVEB GENE 3 PROTEIN EQUINE HERPESVIRUSTYPE 1 146– (STRAIN AB4P) 176 PVGLB_HSVEB GLYCOPROTEIN B EQUINEHERPESVIRUS TYPE 1 443– 934– PRECURSOR (STRAIN AB4P) 470 961 PVGLG_HSVEBGLYCOPROTEIN G EQUINE HERPESVIRUS TYPE 1 383– PRECURSOR (STRAIN AB4P)410 VIMP_HSVEB PROB INTEGRAL EQUINE HERPESVIRUS TYPE 1 147– MEMBRANE(STRAIN AB4P) 174 PROTEIN PVP26_HSVEB CAPSID PROTEIN EQUINE HERPESVIRUSTYPE 1  36– VP26 (STRAIN AB4P) 63 PVG03_HSVEK GENE 3 PROTEIN EQUINEHERPESVIRUS TYPE 1 146– (STRAIN KENTUCKY A) 176 PVGLB_HSVEL GLYCOPROTEINB EQUINE HERPESVIRUS TYPE 1 443– 933– PRECURSOR (STRAIN KENTUCKY D) 470960 PCELF_HSVEB CELL FUSION EQUINE HERPESVIRUS TYPE 1 312– PROTEIN(STRAINS AB4P and Ky A) 339 PRECURSOR PUL47_HSVE4 97 KD ALPHA EQUINEHERPESVIRUS TYPE 4 190– TRANS-INDUCING 217 PROTEIN PVGLB_HSVE4GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 4 486– 616– PRECURSOR 513 643PVGLG_HSVE4 GLYCOPROTEIN G EQUINE HERPESVIRUS TYPE 4 271– PRECURSOR 298PDUT_HSVE4 DEOXYU 5′- EQUINE HERPESVIRUS TYPE 4  90– TRIPHOSPH (STRAIN1942) 117 NUCHYDROLASE PVE2_PAPVE PROBABLE E2 EUROPEAN ELK PAPILLOMAVIRUS 120– PROTEIN 150 PENV_FIVPE ENV POLYPROTEIN FELINEIMMUNODEFICIENCY VIRUS 650– 722– (ISOLATE PETALUMA) 680 749 PPOL_FIVPEPOL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 442– (ISOLATE PETALUMA)473 PENV_FIVSD ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 639– 720–(ISOLATE SAN DIEGO) 668 747 PENV_FIVT2 ENV POLYPROTEIN FELINEIMMUNODEFICIENCY VIRUS 640– 721– (ISOLATE TM2) 679 748 PENV_FLVC6 ENVPOLYPROTEIN FELINE LEUKEMIA PROVIRUS 509– (CLONE CFE-6) 538 PMYC_FLVTTMYC TRANSFORMING FELINE LEUKEMIA PROVIRUS FTT 393– PROTEIN 420 PMYC_FLVMYC TRANSFORMING FELINE LEUKEMIA VIRUS 393– PROTEIN 420 PENV_FLVGL ENVPOLYPROTEIN FELINE LEUKEMIA VIRUS 490– (STRAIN A/GLASGOW-1) 519PENV_FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 510– (STRAIN LAMBDA-B1)539 PENV_FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 487– (STRAIN SARMA)516 PENV_MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523– VIRUS(ISOLATE 57) 553 PENV_MLV7F ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523–VIRUS (ISOLATE FB29) 553 PENV_MLVFP ENV POLYPROTEIN FRIEND MURINELEUKEMIA 523– VIRUS (ISOLATE PVC-211) 553 PENV_GALV ENV POLYPROTEINGIBBON APE LEUKEMIA VIRUS 176– 523– 203 564 PGAG_GALV GAG POLYTROTETNGIBDON APE LEUKEMIA VIRUS 396– 447– 442 474 PPOL_GALV POL POLYPROTEINGIBBON APE LEUKEMIA VIRUS 535– 676– 562 703 PDPOL_HPBGS DNA POLYMERASEGROUND SQUIRREL HEPATITIS VIRUS 271– 325 PPOLG_HPAV8 GENOME HEPATITIS AVIRUS (STRAIN 18F) 203– 1021–  1117–  1454–  POLYPROTEIN 237 1048 11491481 PPOLG_HPAV2 GENOME HEPATITIS A VIRUS (STRAIN 24A) 203– 1021– 1117–  1454–  POLYPROTEIN 237 1048 1149 1481 PPOLG_HPAV4 GENOMEHEPATITIS A VIRUS (STRAIN 43C) 203– 1021–  1117–  1454–  POLYPROTEIN 2371048 1149 1481 PPOLG_HPAVC GENOME HEPATITIS A VIRUS (STRAIN CR326) 203–POLYPROTEIN 237 PPOLG_HPAVG GENOME HEPATITIS A VIRUS (STRAIN GA76) 182–POLYPROTEIN 216 PPOLG_HPAVH GENOME HEPATITIS A VIRUS (STRAIN HM-175)203– 1021–  1103–  POLYPROTEIN 237 1048 1149 PPOLG_HPAVL GENOMEHEPATITIS A VIRUS (STRAIN LA) 203– 1021–  1103–  POLYPROTEIN 237 10481149 PPOLG_HPAVM GENOME HEPATITIS A VIRUS (STRAIN MB8) 203– 1021– 1103–  POLYPROTEIN 237 1048 1149 PDPOL_HPBVP DNA POLYMERASE HEPATITIS BVIRUS (SUBTYPE ADW/ 456– STRAIN PHILIPPINO/PFDW294) 483 PDPOL_HPBVZ DNAPOLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 443– 470 PPOLG_HCV1 GENOMEHEPATITIS C VIRUS (ISOLATE 1) 702– POLYPROTEIN 729 PPOLG_HCVBK GENOMEHEPATITIS C VIRUS (ISOLATE BK) 702– 1045–  POLYPROTEIN 729 1072PPOLG_HCVH GENOME HEPATITIS C VIRUS (ISOLATE H) 702– 1045–  POLYPROTEIN729 1072 PPOLG_HCVJ6 GENOME HEPATITIS C VIRUS (ISOLATE HC-J6) 374–2089–  POLYPROTEIN 401 2116 PPOLG_HCVJ8 GENOME HEPATITIS C VIRUS(ISOLATE HC-J8) 1049–  2089–  POLYPROTEIN 1076 2116 PPOLG_HCVJT GENOMEHEPATITIS C VIRUS (ISOLATE HC-JT) 702– 1045–  POLYPROTEIN 729 1072PPOLG_HCVJA GENOME HEPATITIS C VIRUS (ISOLATE 378-405 702– 1045– POLYPROTEIN JAPANESE) 729 1072 PPOLG_HCVTW GENOME HEPATITIS C VIRUS(ISOLATE TAIWAN) 702– 1045–  POLYPROTEIN 729 1072 PAANT_HDVAM DELTAANTIGEN HEPATITIS DELTA VIRUS (ISOLATE 106– AMERICAN) 133 PAANT_HDVD3DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE 106– AMERICAN) 133PAANT_HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE  16– 106–AMERICAN) 43 133 PAANT_HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS(ISOLATE  16– 106– AMERICAN) 43 133 PAANT_HDVWO DELTA ANTIGEN HEPATITISDELTA VIRUS (ISOLATE 106– AMERICAN) 133 PAANT_HDVIT DELTA ANTIGENHEPATITIS DELTA VIRUS (ISOLATE 106– AMERICAN) 133 PAANT_HDVM2 DELTAANTIGEN HEPATITIS DELTA VIRUS (ISOLATE 106– AMERICAN) 133 PPOLN_HEVBUNON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 219– 349– POLYPROTEIN BURMA)246 376 PPOLN_HEVME NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 219– 349–POLYPROTEIN MEXICO) 246 376 PPOLN_HEVMY N-STRUCTURAL HEPATITIS E VIRUS(STRAIN 219– 349– POLYPROTEIN MYANMAR) 246 376 PPOLN_HEVPANON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 218– 348– POLYPROTEIN PAKISTAN)245 375 PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS  5– 39PVMSA_HPBHE MAJOR SURFACE HERON HEPATITIS B VIRUS 294– ANTIGEN 328PRECURSOR PIE63_HSVI1 TRANSCRIPTIONAL HERPES SIMPLEX VIRUS (TYPE 1/ 248–REGULATOR IE63 STRAIN 17) 275 PIE68_HSV11 IMMEDIATE-EARLY HERPES SIMPLEXVIRUS (TYPE 1/  40– PROTEIN IE68 STRAIN 17) 67 PTEGU_HSV11 LARGETEGUMENT HERPES SIMPLEX VIRUS (TYPE 1/ 667– 1673–  PROTEIN STRAIN 17)694 1710 PUL06_HSV11 VIRION PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/ 586–UL6 STRAIN 17) 613 PUL34_HSV11 VIRION PROTEIN HERPES SIMPLEX VIRUS (TYPE1/ 116– UL34 STRAIN 17) 143 PUL37_HSV11 PROTEIN UL37 HERPES SIMPLEXVIRUS (TYPE 1/ 470– 853– STRAIN 17) 497 884 PUL42_HSV11 DNA-BINDINGHERPES SIMPLEX VIRUS (TYPE 1/ 231– PROTEIN UL42 STRAIN 17) 258PUL47_HSV11 VIRION PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/ 488– UL47STRAIN 17) 515 PVGLC_HSV11 GLYCOPROTEIN C HERPES SIMPLEX VIRUS (TYPE 1/469– PRECURSOR STRAIN 17) 510 PAT12_HSV11 ALPHA TRANS-IND HERPES SIMPLEXVIRUS (TYPE 1/ 308– FACTOR 78 KD STRAIN 17) 335 PRO PUL47_HSV1F VIRIONPROTEIN HERPES SIMPLEX VIRUS (TYPE 1/ 488– UL47 STRAIN F) 515PAT12_HSV1F ALPHA TRANS-IND HERPES SIMPLEX VIRUS (TYPE 1/ 308– FACTOR 77KD STRAIN F) 335 PRO PVGLC_HSV1K GLYCOPROTEIN C HERPES SIMPLEX VIRUS(TYPE 1/ 469– PRECURSOR STRAIN KOS) 510 PVGLE_HSV2 GLYCOPROTEIN E HERPESSIMPLEX VIRUS (TYPE 2) 111– PRECURSOR 148 PTEGU_HSV6G LARGE TEGUMENTHERPES SIMPLEX VIRUS (TYPE 6/ 102– 228– 567– 962– 1098–  1661– 1884–PROTEIN STRAIN GS) 129 262 611 993 1181 1688 1911 PVGLH_HSV6GGLYCOPROTEIN H HERPES SIMPLEX VIRUS (TYPE 6/  62– 360– PRECURSOR STRAINGS) 89 403 PYRF1_HSV6G HYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE 6/ 208–PROTEIN RF1 STRAIN GS) 235 PYRF2_HSV6G HYPOTHETICAL HERPES SIMPLEX VIRUS(TYPE 6/ 223– 268– PROTEIN RF2 STRAIN GS) 257 299 PYRF3_HSV6GHYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE 6/ 141– PROTEIN RF3 STRAIN GS)168 PYRF4_HSV6G HYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE 6/ 404– PROTEINRF4 STRAIN GS) 441 PP100_HSV6U MAJOR ANTIGENIC HERPES SIMPLEX VIRUS(TYPE 6/  81– 189– 688– 785– STRUCTL PROTEIN STRAIN UGANDA-1102) 108 216715 812 PUL87_HSV6U HYPOTHETICAL HERPES SIMPLEX VIRUS (TYPE 6/ 536– 729–PROTEIN 5R STRAIN UGANDA-1102) 563 768 PUL95_HSV6U HYPOTHETICAL HERPESSIMPLEX VIRUS (TYPE 6/  73– 105– PROTEIN 13R STRAIN UGANDA-1102) 100 134PVCAP_HSV6U MAJOR CAPSID HERPES SIMPLEX VIRUS (TYPE 6/ 136– 355– PROTEINSTRAIN UGANDA-1102) 170 382 PVTER_HSV6U PROBABLE DNA HERPES SIMPLEXVIRUS (TYPE 6/ 176– PACKAGING STRAIN UGANDA-1102) 203 PROTEINPTYSY_HSVAT THYMIDYLATE HERPESVIRUS ATELES 116– SYNTHASE 143 PDPOL_HSVSADNA POLYMERASE HERPESVIRUS SAIMIRI (STRAIN 11) 625– 652 PDUT_HSVSADEOXYU 5′- HERPESVIRUS SAIMIRI (STRAIN 11) 179– TRIPHOSPH 213NUCHYDROLASE PHEL1_HSVSA PROBABLE HERPESVIRUS SAIMIRI (STRAIN 11) 418–HELICASE 449 PIC1B_HSVSA PROBABLE PROC & HERPESVIRUS SAIMIRI (STRAIN 11) 58– 482– TRANSPORT PRO 85 522 PIE68_HSVSA IMMEDIATE-EARLY HERPESVIRUSSAIMIRI (STRAIN 11)  48– PROTEIN 78 PKITH_HSVSA THYMIDINE HERPESVIRUSSAIMIRI (STRAIN 11) 340– KINASE 386 PRIR1_HSVSA RIBONUC- HERPESVIRUSSAIMIRI (STRAIN 11) 324– DIPHOSPH 351 REDUCT LARGE CHA PTEGU_HSVSAPROBABLE LARGE HERPESVIRUS SAIMIRI (STRAIN 11) 524– 672– 777– 846– 949– 990– 1467– 2102– TEGUMENT 607 700 814 898 986 1017 1497 2135 PROTEINPTYSY_HSVSA THYMIDYLATE HERPESVIRUS SAIMIRI (STRAIN 11) 120– SYNTHASE147 PUL06_HSVSA VIRION GENE 43 HERPESVIRUS SAIMIRI (STRAIN 11)  15– 302–368– PROTEIN 42 358 402 PUL25_HSVSA VIRION GENE 19 HERPESVIRUS SAIMIRI(STRAIN 11) 34–61 204– 362– PROTEIN 231 389 PUL34_HSVSA GENE 67 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 208– 235 PUL37_HSVSA GENE 63 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11)  31– 685– 65 737 PUL52_HSVSA PROB DNAREP HERPESVIRUS SAIMIRI (STRAIN 11) 130– GENE 56 PROTEIN 157 PUL73_HSVSAHYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11)  9– GENE S3 PROTEIN 36PUL87_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11) 582– GENE 24PROTEIN 609 PUL92_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11) 92– GENE 31 PROTEIN 122 PUNG_HSVSA URACIL-DNA HERPESVIRUS SAIMIRI(STRAIN 11) 135– GLYCOSYLASE 176 PVCAP_HSVSA MAJOR CAPSID HERPESVIRUSSAIMIRI (STRAIN 11) 769– PROTEIN 799 PVG45_HSVSA HYPOTHETICALHERPESVIRUS SAIMIRI (STRAIN 11) 138– GENE 45 PROTEIN 165 PVG48_HSVSAHYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11) 360– GENE 48 PROTEIN 394PVG52_HSVSA HYPOTHETICAL HERPESVIRUS SAIMIRI (STRAIN 11)  47– GENE 52PROTEIN 74 PVGLH_HSVSA GLYCOPROTEIN H HERPESVIRUS SAIMIRI (STRAIN 11)388– PRECURSOR 415 VIMP_HSVSA INTEGRAL HERPESVIRUS SAIMIRI (STRAIN 11) 80– MEMBRANE 107 PROTEIN PVP23_HSVSA PROBABLE CAPSID HERPESVIRUSSAIMIRI (STRAIN 11)  2– PROTEIN VP23 29 PVP26_HSVSA CAPSID PROTEINHERPESVIRUS SAIMIRI (STRAIN 11)  48– VP26 75 PVP40_HSVSA CAPSID PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 205– 344– P40 232 372 PVP75_HSVSAPROBABLE HERPESVIRUS SAIMIRI (STRAIN 11) 181– 929– MEMBRANE 208 977ANTIGEN 75 PDNB1_HSVSA MAJOR DNA- HERPESVIRUS SAIMIRI (STRAIN 11) 333–512– BINDING 368 539 PROTEIN PCGH2_HSVSA CYCLIN HOMOLOG HERPESVIRUSSAIMIRI (STRAIN 11) 127– 154 PYDH1_HSVS7 HYPOTH 24.1 KD HERPESVIRUSSAIMIRI 161– IN DHFR 3′ (STRAIN 484-77) 188 REGION PYDH1_HSVSC HYPOTH28.7 KD HERPESVIRUS SAIMIRI (SUBGROUP C/  52– IN DHFR 3′ STRAIN 488) 82REGION PYDH4_HSVSC HYPOTH 9.9 KD HERPESVIRUS SAIMIRI (SUBGROUP C/  53–IN DHFR 3′ STRAIN 488) 83 REGION PENV_MLVHO ENV POLYPROTEIN HOMULVMURINE LEUKEMIA VIRUS 510– 540 PDPOL_HCMVA DNA POLYMERASE HUMANCYTOMEGALOVIRUS (STRAIN 753– AD169) 780 PIC18_HCMVA PROB PROC & HUMANCYTOMEGALOVIRUS (STRAIN 294– TRANSPORT PRO AD169) 324 UL56 PIR05_HCMVAHYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN  22– PROTEIN IRL5 AD169) 49PIR12_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN  74– PROTEINIRL12 AD169) 162 PIR13_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN 31– PROTEIN IRL13 AD169) 62 PRJR1_HCMVA RIBONUC- HUMAN CYTOMEGALOVIRUS(STRAIN 622– DIPHOSPH AD169) 649 REDUCT LARGE CHA PTEGU_HCMVA PROBABLELARGE HUMAN CYTOMEGALOVIRUS (STRAIN 1251–  2202–  TEGUMENT AD169) 12812229 PROTEIN PUL08_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN  6–PROTEIN UL8 AD169) 47 PUL13_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS(STRAIN 347– PROTEIN UL13 ADI69) 374 PUL16_HCMVA HYPOTHETICAL HUMANCYTOMEGALOVIRUS (STRAIN  81– PROTEIN UL16 AD169) 112 PUL20_HCMVA HYPOTHPRO UL20 HUMAN CYTOMEGALOVIRUS (STRAIN  34– PRECURSOR AD169) 61PUL31_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN 167– 254– PROTEINUL31 AD169) 194 284 PUL35_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS(STRAIN 535– PROTEIN UL35 AD169) 562 PUL47_HCMVA PROTEIN UL47 HUMANCYTOMEGALOVIRUS (STRAIN 114– 448– 763– 802– AD169) 148 485 790 853PUL50_HCMVA PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAIN 159– AD169) 186PUL59_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN  74– PROTEIN UL59AD169) 101 PUL70_HCMVA PROB DNA REP HUMAN CYTOMEGALOVIRUS (STRAIN  65–PROTEIN UL70 AD169) 92 PUL73_HCMVA UL73 HUMAN CYTOMEGALOVIRUS (STRAIN 5– GLYCOPROTEIN AD169) 73 PRECURSOR PUL74_HCMVA HYPOTHETICAL HUMANCYTOMEGALOVIRUS (STRAIN  45– PROTEIN UL74 AD169) 79 PUL93_HCMVA PROTEINUL93 HUMAN CYTOMEGALOVIRUS (STRAIN  26– 314– AD169) 53 381 PUL95_HCMVAHYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN  37– PROTEIN UL95 AD169) 71PULA4_HCMVA VIRION PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN  4– 443– UL104AD169) 31 477 PULB9_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN 33– PROTEIN UL119 AD169) 78 PULD0_HCMVA HYPOTHETICAL HUMANCYTOMEGALOVIRUS (STRAIN  90– PROTEIN UL130 AD169) 124 PUS09_HCMVAHYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN  20– PROTEIN HXLF3 AD169) 47PUS14_HCMVA HYPOTHETICAL HUMAN CYTOMEGALOVIRUS (STRAIN 277– PROTEINHVLF4 AD169) 308 PUS18_HCMVA MEMBRANE HUMAN CYTOMEGALOVIRUS (STRAIN 191–PROTEIN AD169) 218 HWLF5 PVGLB_HCMVA GLYCOPROTEIN B HUMANCYTOMEGALOVIRUS (STRAIN  25– 397– 440– 851– PRECURSOR AD169) 88 424 467878 PVGLH_HCMVA GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS (STRAIN 107– 270–PRECURSOR AD169) 136 297 PVGLI_HCMVA 1E GLYCOPROTEIN HUMANCYTOMEGALOVIRUS (STRAIN  47– • PRECURSOR AD169) 111 PVTER_HCMVA PROBABLEDNA HUMAN CYTOMEGALOVIRUS (STRAIN 417– PACKAGING AD169) 451 PROTEINPDNB1_HCMVA MAJOR DNA- HUMAN CYTOMEGALOVIRUS (STRAIN 437– BINDING AD169)464 PROTEIN PV30K_HCMVE 30 KD MAJOR HUMAN CYTOMEGALOVIRUS (STRAIN 194–EARLY EISENHARDT) 221 PROTEIN PVGLB_HCMVT GLYCOPROTEIN B HUMANCYTOMEGALOVIRUS (STRAIN  50– 397– 435– 852– PRECURSOR TOWNE) 88 424 462879 PVGLH_HCMVT GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 106– PRECURSOR(STRAIN TOWNE) 135 PENV_HV1A2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 544– 630– 790– TYPE 1 (ARV2/SF2 ISOLATE) 592 682 825 PGAG_HV1A2GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  91– TYPE 1 (ARV2/SF2ISOLATE) 118 PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS218– 620– TYPE 1 (ARV2/SF2 ISOLATE) 245 661 PVPU_HV1A2 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS  3– TYPE 1 (ARV2/SF2 ISOLATE) 31 PVPU_HV1B1 VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  5– TYPE 1 (BH10 AND HXB3 ISOLATES)48 PENV_HV1B1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 545– 631–791– TYPE 1 (BH10 ISOLATE) 594 683 818 PPOL_HV1B1 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 230– 637– TYPE 1 (BH10 ISOLATE) 257 673PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 230– 632– TYPE 1(BH5 ISOLATE) 257 673 PENV_HV1B8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 540– 626– 786– TYPE 1 (BH8 ISOLATE) 589 678 813 PVPU_HV1B8 VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  21– TYPE 1 (BH8 ISOLATE) 48PENV_HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 267– 338– 562–628– 787– TYPE 1 (BRAIN ISOLATE) 294 363 590 679 815 PVPU_HV1BN VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  22– TYPE I (BRAIN ISOLATE) 49PENV_HV1BR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 550– 636– 796–TYPE I (BRU ISOLATE) 599 688 823 PPOL_HV1BR POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 230– 632– TYPE 1 (BRU ISOLATE) 257 673 PVPU_HV1BRVPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  5– TYPE 1 (BRU ISOLATE) 48PENV_HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 397– 557– 643–803– TYPE 1 (CDC-451 ISOLATE) 424 606 695 835 PVPU_HV1C4 VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS  3– TYPE 1 (CDC-451 ISOLATE) 30 PENV_HV1ELENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 255– 386– 543– 628– TYPE 1(ELI ISOLATE) 296 413 591 680 PNEF_HV1EL NEGATIVE FACTOR HUMANIMMUNODEFICIENCY VIRUS  81– TYPE 1 (ELI ISOLATE) 119 PPOL_HV1EL POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 217– 624– TYPE 1 (ELI ISOLATE)244 660 PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  6– TYPE 1(ELI ISOLATE) 33 PENV_HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS545– 631– 791– TYPE 1 (HXB2 ISOLATE) 594 683 818 PPOL_HV1H2 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 218– 620– 921– TYPE 1 (HXB2ISOLATE) 245 661 951 PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 5– TYPE 1 (HXB2 ISOLATE) 48 PENV_HV1H3 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 545– 631– 791– TYPE 1 (HXB3 ISOLATE) 594 683 818PENV_HV1J3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 350– 556– 642–802– TYPE 1 (JH3 ISOLATE) 377 605 694 829 PGAG_HV1J3 GAG POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS  91– TYPE 1 (JH3 ISOLATE) 118 PVPU_HV1J3VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  2– TYPE 1 (JH3 ISOLATE) 29PENV_HV1JR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 336– 622– 783–TYPE 1 (JRCSF ISOLATE) 363 675 811 PPOL_HV1JR POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 222– 624– TYPE 1 (JRCSF ISOLATE) 249 665PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  22– TYPE 1 (JRCSFISOLATE) 49 PENV_HV1MA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 547–633– 794– TYPE 1 (MAL ISOLATE) 595 707 826 PPOL_HV1MA POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS 217– 476– 619– TYPE 1 (MAL ISOLATE) 244 510660 PVPU_HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  5– TYPE 1 (MALISOLATE) 32 PENV_HV1MF ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 543–629– 789– TYPE 1 (MFA ISOLATE) 592 681 816 PENV_HV1MN ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS 343– 567– 632– 791– TYPE 1 (MN ISOLATE) 370595 684 819 PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  87–TYPE 1 (MN ISOLATE) 118 PPOL_HV1MN POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 221– 623– TYPE 1 (MN ISOLATE) 248 664 PENV_HV1NDENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 249– 536– 621– 783– TYPE 1(NDK ISOLATE) 290 583 673 813 PNEF_HV1ND NEGATIVE FACTOR HUMANIMMUNODEFICIENCY VIRUS  81– TYPE 1 (NDK ISOLATE) 119 PPOL_HV1ND POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 217– 624– TYPE 1 (NDK ISOLATE)244 660 PVPU_HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS  6– TYPE 1(NDK ISOLATE) 33 PENV_HV1N5 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS326– TYPE 1 (NEW YORK-5 ISOLATE) 360 PPOL_HV1N5 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 218– 625– TYPE 1 (NEW YORK-5 ISOLATE) 245 661PENV_HV1OY ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 544– 630– 789–TYPE 1 (OY1 ISOLATE) 593 704 820 PPOL_HV1OY POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 218– 620– TYPE 1 (OYI ISOLATE) 245 661 PENV_HV1PVENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 545– 631– 791– TYPE 1 (PV22ISOLATE) 594 683 818 PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 230– 637– TYPE 1 (PV22 ISOLATE) 257 673 PVPU_HV1PV VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS  5– TYPE 1 (PV22 ISOLATE) 48 PENV_HV1RH ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 280– 351– 554– 640– 800– TYPE 1(RF/HAT ISOLATE) 307 378 602 692 832 PPOL_HV1RH POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 217– 619– TYPE 1 (RF/HAT ISOLATE) 244 660VIF_HV1RH VIRION HUMAN IMMUNODEFICIENCY VIRUS  62– INFECTIVITY TYPE 1(RF/HAT ISOLATE) 89 FACTOR PENV_HV1SC ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 338– 545– 631– TYPE 1 (SC ISOLATE) 365 593 683PENV_HV1S1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 333– 536– 622–782– TYPE 1 (SF162 ISOLATE) 363 585 674 809 PVPU_HV1S1 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS  22– TYPE 1 (SF162 ISOLATE) 49 PENV_HV1S3 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 541– 627– 787– TYPE 1 (SF33ISOLATE) 589 679 815 PENV_HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 274– 555– 637– 776– TYPE 1 (STRAIN KB-1-GP32) 301 596 677 824PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 217– 513– 619–TYPE 1 (STRAIN UGANDAN/ISOLATE U 244 540 660 PENV_HV1W1 ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS 338– 545– 631– 791– TYPE 1 (WMJ1 ISOLATE)365 593 683 818 PENV_HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS334– 536– 622– 782– TYPE 1 (WMJ2 ISOLATE) 361 584 674 809 PENV_HV1Z8 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 266– 573– 634– 797– TYPE 1(Z-84 ISOLATE) 307 601 678 828 PENV_HV1Z2 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 255– 542– 628– 790– TYPE 1 (Z2/CDC-Z34 ISOLATE)296 591 680 820 PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS217– 619– TYPE 1 (Z2/CDC-Z34 ISOLATE) 244 660 PENV_HV1Z3 ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS 251– TYPE 1 (ZAIRE 3 ISOLATE) 292PENV_HV1Z6 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 256– 545– 630–792– TYPE 1 (ZAIRE 6 ISOLATE) 297 593 682 822 PNEF_HV1Z6 NEGATIVE FACTORHUMAN IMMUNODEFICIENCY VIRUS  86– TYPE 1 (ZAIRE 6 ISOLATE) 124PENV_HV1ZH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 545– 627– 791–TYPE 1 (ZAIRE HZ321 ISOLATE) 594 666 823 PENV_HV2BE ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS  61– 532– 621– 653– TYPE 2 (ISOLATE BEN) 88591 648 697 PGAG_HV2BE GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  88–TYPE 2 (ISOLATE BEN) 115 PPOL_HV2BE POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 491– TYPE 2 (ISOLATE BEN) 582 PENV_HV2CA ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 534– 623– 655– TYPE 2 (ISOLATECAM2) 593 650 699 PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 471– TYPE 2 (ISOLATE CAM2) 562 PENV_HV2D1 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  61– 523– 555– 644– TYPE 2 (ISOLATE D194) 88 550582 688 PGAG_HV2D1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  88–TYPE 2 (ISOLATE D194) 115 PPOL_HV2D1 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 509– TYPE 2 (ISOLATE D194) 600 PPOL_HV2D2 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 491– TYPE 2 (ISOLATE D205.7)568 PENV_HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  60– 524–556– 613– 645– TYPE 2 (ISOLATE GHANA-1) 87 551 583 640 693 PPOL_HV2G1POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 471– TYPE 2 (ISOLATEGHANA-1) 562 PENV_HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 61– 524– 556– 613– 662– TYPE 2 (ISOLATE N1H-Z) 88 551 583 640 689PGAG_HV2NZ GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  88– TYPE 2(ISOLATE N1H-Z) 115 PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 471– TYPE 2 (ISOLATE N1H-Z) 529 PENV_HV2RO ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  58– 533– 622– TYPE 2 (ISOLATE ROD) 85 592 698PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 472– TYPE 2(ISOLATE ROD) 563 PENV_HV2SB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 557– 614– TYPE 2 (ISOLATE SBLISY) 584 673 PPOL_HV2SB POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 493– TYPE 2 (ISOLATE SBLISY)562 PENV_HV2ST ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 442– 527–559– 648– TYPE 2 (ISOLATE ST) 476 554 586 692 PGAG_HV2ST GAG POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS  88– TYPE 2 (ISOLATE ST) 115 PPOL_HV2ST POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 491– TYPE 2 (ISOLATE ST) 582PENV_HV2S2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 442– 527– 559–648– TYPE 2 (ISOLATE ST/24 IC#2) 476 554 586 682 PVE4_HPV11 PROBABLE E4HUMAN PAPILLOMA VIRUS  81– PROTEIN TYPE 11 108 PVE5A_HPV11 PROBABLE E5AHUMAN PAPILLOMA VIRUS  30– PROTEIN TYPE 11 60 PVE2_HPV13 E2 PROTEINHUMAN PAPILLOMA VIRUS 157– 334– TYPE 13 184 361 PVE2_HPV16 E2 PROTEINHUMAN PAPILLOMA VIRUS  61– 312– TYPE 16 105 342 PVE4_HPV16 PROBABLE E4HUMAN PAPILLOMA VIRUS  66– PROTEIN TYPE 16 93 PVE1_HPV18 El PROTEINHUMAN PAPILLOMA VIRUS  60– TYPE 18 87 PVE2_HPV18 E2 PROTEIN HUMANPAPILLOMA VIRUS 313– TYPE 18 340 PVE4_HPV18 PROBABLE E4 HUMAN PAPILLOMAVIRUS  59– PROTEIN TYPE 18 86 PVE6_HPV18 E6 PROTEIN HUMAN PAPILLOMAVIRUS  75– TYPE 18 102 VL1_HPV18 PROBABLE L1 HUMAN PAPILLOMA VIRUS 183–PROTEIN TYPE 18 210 PVE2_HPV1A E2 PROTEIN HUMAN PAPILLOMA VIRUS 159–TYPE 1A 186 VL2_HPV1A PROBABLE L2 HUMAN PAPILLOMA VIRUS 407– PROTEINTYPE 1A 445 PVE1_HPV2A E1 PROTEIN HUMAN PAPILLOMA VIRUS  21– TYPE 2A 48PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMA VIRUS 159– TYPE 2A 193 PVE4_HPV31PROBABLE E4 HUMAN PAPILLOMA VIRUS  75– PROTEIN TYPE 31 102 PVE6_HPV31 E6PROTEIN HUMAN PAPILLOMA VIRUS  69– TYPE 31 96 PVE1_HPV33 E1 PROTEINHUMAN PAPILLOMA VIRUS 170– TYPE 33 207 PVE2_HPV33 E2 PROTEIN HUMANPAPILLOMA VIRUS 304– TYPE 33 331 VL1_HPV33 PROBABLE L1 HUMAN PAPILLOMAVIRUS  19– PROTEIN TYPE 33 46 PVE2_HPV35 E2 PROTEIN HUMAN PAPILLOMAVIRUS 158– 327– TYPE 35 192 354 PVE5_HPV35 PROBABLE E5 HUMAN PAPILLOMAVIRUS  27– PROTEIN TYPE 35 54 PVE1_HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS 103– TYPE 39 130 PVE2_HPV39 E2 PROTEIN HUMAN PAPILLOMA VIRUS  7–323– TYPE 39 34 357 PVE6_HPV39 E6 PROTEIN HUMAN PAPILLOMA VIRUS  71–TYPE 39 102 PVE1_HPV41 E1 PROTEIN HUMAN PAPILLOMA VIRUS  55– TYPE 41 89PVE4_HPV41 PROBABLE E4 HUMAN PAPILLOMA VIRUS  63– PROTEIN TYPE 41 97PVE6_HPV41 E6 PROTEIN HUMAN PAPILLOMA VIRUS 119– TYPE 41 146 VL1_HPV41PROBABLE L1 HUMAN PAPILLOMA VIRUS 345– PROTEIN TYPE 41 372 VL2_HPV41PROBABLE L2 HUMAN PAPILLOMA VIRUS 415– PROTEIN TYPE 41 442 PVE1_HPV42 E1PROTEIN HUMAN PAPILLOMA VIRUS  25– TYPE 42 59 PVE6_HPV45 E6 PROTEINHUMAN PAPILLOMA VIRUS  75– TYPE 45 102 PVE1_HPV47 E1 PROTEIN HUMANPAPILLOMA VIRUS 146– TYPE 47 173 PVE2_HPV47 E2 PROTEIN HUMAN PAPILLOMAVIRUS  17– 148– 276– TYPE 47 51 175 303 PVE2_HPV05 PROBABLE E2 HUMANPAPILLOMA VIRUS  17– PROTEIN TYPE 5 51 PVE4_HPV05 PROBABLE E4 HUMANPAPILLOMA VIRUS 202– PROTEIN TYPE 5 229 PVE2_HPV51 E2 PROTEIN HUMANPAPILLOMA VIRUS 137– TYPE 51 184 PVE6_HPV51 E6 PROTEIN HUMAN PAPILLOMAVIRUS  72– TYPE 51 99 VL1_HPV51 PROBABLE L1 HUMAN PAPILLOMA VIRUS  19–PROTEIN TYPE 51 46 PVE1_HPV57 E1 PROTEIN HUMAN PAPILLOMA VIRUS  21– TYPE57 48 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMA VIRUS 166– TYPE 57 193PVE2_HPV58 E2 PROTEIN HUMAN PAPILLOMA VIRUS  2– 309– TYPE 58 36 336VL1_HPV58 PROBABLE L1 HUMAN PAPILLOMA VIRUS  45– PROTEIN TYPE 58 72PVE2_HPV5B PROBABLE E2 HUMAN PAPILLOMA VIRUS  17– PROTEIN TYPE 5B 51PVE4_HPV5B PROBABLE E4 HUMAN PAPILLOMA VIRUS 202– PROTEIN TYPE 5B 229PVE5_HPV5B PROBABLE E5 HUMAN PAPILLOMA VIRUS  11– PROTEIN TYPE 5B 41PVE5A_HPV6B PROBABLE E5A HUMAN PAPILLOMA VIRUS  30– PROTEIN TYPE 6B 60PVE5A_HPV6C PROBABLE E5A HUMAN PAPILLOMA VIRUS  30– PROTEIN TYPE 6C 60VL1_HPV05 PROBABLE L1 HUMAN PAPILLOMA VIRUS 354– PROTEIN TYPE 8 392PVE6_HPVME E6 PROTEIN HUMAN PAPILLOMA VIRUS  71– TYPE M1 180 102PRRPP_PHHB RNA POLYMERASE HUMAN PARAINFLUENZA 1 VIRUS  84– 234– 375–ALPHA SUBUNIT (STRAIN C35) 111 261 416 PNCAP_PHHC NUCLEOCAPSID HUMANPARAINFLUENZA 1 VIRUS 377– 455– PROTEIN (STRAIN C39) 404 482 PRRPP_PHHCRNA POLYMERASE HUMAN PARAINFLUENZA 1 VIRUS  84– 234– 375– ALPHA SUBUNIT(STRAIN C39) 111 261 416 PVGLF_PHHC FUSION HUMAN PARAINFLUENZA 1 VIRUS147– 210– GLYCOPROTEIN (STRAIN C39) 174 266 PRECURSOR PRRPP_PHHE RNAPOLYMERASE HUMAN PARAINFLUFNZA 1 VIRUS  84– 244– 175– ALPHA SUBUNIT(STRAIN C1-14/83) 111 271 416 PVN5C_PH1111 NONSTRUCTURAL HUMANPARAINFLUENZA 1 VIRUS  41– PROTEIN C (STRAIN C1-14/83) 75 PRRPP_PHHD RNAPOLYMERASE HUMAN PARAINFLUENZA 1 VIRUS  84– 232– 375– ALPHA SUBUNIT(STRAIN CI-5/73) 111 262 416 PHEMA_PHHW HEMAGGLUTININ- HUMANPARAINFLUENZA 1 VIRUS  79– 366– NEURAMINIDASE (STRAIN WASHINGTON/1957)110 393 PNCAP_PHHW NUCLEOCAPSID HUMAN PARAINFLUENZA 1 VIRUS 377– 444–PROTEIN (STRAIN WASHINGTON/1957) 404 488 PRRPP_P12H RNA POLYMERASE HUMANPARAINFLUENZA 2 VIRUS 167– 222– ALPHA SUBUNIT 194 256 PVGLF_P12H FUSIONHUMAN PARAINFLUENZA 2 VIRUS  90– 141– 238– 483– GLYCOPROTEIN 117 175 266528 PRECURSOR PVGLF_P12HG FUSION HUMAN PARAINFLUENZA 2 VIRUS  90–  14!–238– 483– GLYCOPROTEIN (STRAIN GREER) 117 175 266 528 PRECURSORPRRPL_P12HT RNA POLYMERASE HUMAN PARAINFLUENZA 2 VIRUS 322– 1564– 1687–  1901–  BETA SUBUNIT (STRAIN TOSHIBA) 349 1598 1721 1946PRRPP_P12HT RNA POLYMERASE HUMAN PARAINFLUENZA 2 VIRUS 167– 222– ALPHASUBUNIT (STRAIN TOSHIBA) 194 256 PVGLF_P12HT FUSION HUMAN PARAINFLUENZA2 VIRUS  90– 141– 238– 483– GLYCOPROTEIN (STRAIN TOSHIBA) 117 175 266528 PRECURSOR PVMAT_P12HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2 VIRUS 96– (STRAIN TOSHIBA) 123 PHEMA_P13HA HEMAGGLUTININ- HUMAN PARAINFLUENZA3 VIRUS  27– NEURAMINIDASE (STRAIN AUS/124854/74) 61 PNCAP_P13H4NUCLEOCAPSID HUMAN PARAINFLUENZA 3 VIRUS 376– PROTEIN (STRAIN NIH)47885403 PHEMA_P13H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS  27–NEURAMINIDASE (STRAIN NIH 47885) 61 PRRPL_P13H4 RNA POLYMERASE HUMANPARAINFLUENZA 3 VIRUS  52– 136– 608– 1081–  1994–  2115– BETA SUBUNIT(STRAIN NIH 47885) 86 163 638 1123 2036 2142 PRRPP_P13H4 RNA POLYMERASEHUMAN PARAINFLUENZA 3 VIRUS 114– 269– ALPHA SUBUNIT (STRAIN NIH 47885)144 299 PVGLF_P13H4 FUSION HUMAN PARAINFLUENZA 3 VIRUS 115– 207– 457–GLYCOPROTEIN (STRAIN NIH 47885) 182 241 497 PRECURSOR PVMAT_P13H4 MATRIXPROTEIN HUMAN PARAINFLUENZA 3 VIRUS 201– (STRAIN NIH 47885) 231PVNSC_P13H4 NONSTRUCTURAL HUMAN PARAINFLUENZA 3 VIRUS  58– PROTEIN C(STRAIN NIH 47885) 99 PHEMA_P13HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3VIRUS  27– NEURAMINIDASE (STRAIN TEX/12677/83) 61 PHEMA_P13HTHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS  27– NEURAMINIDASE (STRAINTEX/545/80) 76 PHEMA_P13HU HEMAGGLUTINTN- HUMAN PARAINFLUENZA 3 VIRUS 23– NEURAMINIDASE (STRAIN TEX/9305/82) 70 PHEMA_P13HX HEMAGGLUTININ-HUMAN PARAINFLUENZA 3 VIRUS  27– NEURAMINIDASE (STRAIN WASH/1511/73) 61PHEMA_P13HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS  27–NEURAMINIDASE (STRAIN WASH/641/79) 61 PRRPP_P14HA RNA POLYMERASE HUMANPARAINFLUENZA 4A  4– ALPHA SUBUNIT VIRUS (STRAIN TOSHIBA) 38 PVV_P14HA VPROTEIN HUMAN PARAINFLUENZA 4A  4– VIRUS (STRAIN TOSHIBA) 38 PRRPP_HRSVRNA POLYMERASE HUMAN RESPIRATORY SYNCYTIAL  99– ALPHA SUBUNIT VIRUS 141PNCAP_HRSVA NUCLEOCAPSID HUMAN RESPIRATORY SYNCYTIAL  4– PROTEIN VIRUS31 (STRAIN A2) PRRPL_HRSVA RNA POLYMERASE HUMAN RESPIRATORY SYNCYTIAL103– 210– 667– 788– 1007–  1138– 1453– 1776– 2062– BETA SUBUNIT VIRUS192 237 694 815 1034 1165 1480 1803 2089 (STRAIN A2) PRRPP_HRSVA RNAPOLYMERASE HUMAN RESPIRATORY SYNCYTIAL  99– ALPHA SUBUNIT VIRUS 141(STRAIN A2) PVGLF_HRSVA FUSION HUMAN RESPIRATORY SYNCYTIAL  38– 154–213– 488– GLYCOPROTEIN VIRUS 65 202 243 518 PRECURSOR (STRAIN A2)PVMA2_HRSVA MATRIX GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL 124– M2VIRUS 151 (STRAIN A2) PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORYSYNCYTIAL 219– VIRUS 246 (STRAIN A2) PVGLG_HRSV4 MAJOR SURFACE HUMANRESPIRATORY SYNCYTIAL  66– GLYCOPROTEIN G VIRUS 107 (STRAIN RSB5857)PVGLG_HRSV5 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL 243– GLYCOPROTEING VIRUS 273 (STRAIN RSB6190) PVGLF_HRSVR FUSION HUMAN RESPIRATORYSYNCYTIAL  38– 154– 213– 442– 488– GLYCOPROTEIN VIRUS (STRAIN RSS-2) 65202 243 471 518 PRECURSOR PRRPP_HRSVL RNA POLYMERASE HUMAN RESPIRATORYSYNCYTIAL  99– ALPHA SUBUNIT VIRUS (SUBGROUP A / STRAIN 141 LONG)PVGLF_HRSVL FUSION HUMAN RESPIRATORY SYNCYTIAL  38– 154– 216– 444– 488–GLYCOPROTEIN VIRUS (SUBGROUP A / STRAIN 65 202 243 471 515 PRECURSORLONG) PNCAP_HRSV1 NUCLEOCAPSID HUMAN RESPIRATORY SYNCYTIAL 4– 74– 112–PROTEIN VIRUS (SUBGROUP B / STRAIN 31 108 141 18537) PRRPP_HRSV1 RNAPOLYMERASE HUMAN RESPIRATORY SYNCYTIAL 99– ALPHA SUBUNIT VIRUS (SUBGROUPB / STRAIN 18537) 141 PVGLF_HRSV1 FUSION HUMAN RESPIRATORY SYNCYTIAL 38–154– 442– 488– GLYCOPROTEIN VIRUS (SUBGROUP B / STRAIN 65 203 471 515PRECURSOR 18537) PVGLG_HRSV1 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL63– GLYCOPROTEIN G VIRUS (SUBGROUP B / STRAIN 93 18537) PVGLG_HRSV8MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL 66– GLYCOPROTEIN G VIRUS(SUBGROUP B / STRAIN 93 8/60) PENV_HTL1C ENV POLYPROTEIN HUMAN T-CELLLEUKEMIA VIRUS TYPE 1 342– (CARIBBEAN ISOLATE) 376 PPOL_HTL1C POLPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 674– (CARIBBEAN ISOLATE)712 PENV_HTL1M ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 342–(ISOLATE MT-2) 376 PENV_HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIAVIRUS TYPE 1 342– (STRAIN ATK) 376 PPOL_HTL1A POL POLYPROTEIN HUMANT-CELL LEUKEMIA VIRUS TYPE 1 674– (STRAIN ATK) 712 PENV_HTLV2 ENVPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 336– TYPE II 370 PDPOL_HSV11 DNAPOLYMERASE ICTALURID HERPESVIRUS 1 328– 710– 366 737 PKR74_HSV11 GENE 74PROTEIN ICTALURID HERPESVIRUS 1 491– KINASE 518 PVG07_HSV11 HYPOTH GENE7 ICTALURID HERPESVIRUS 1 71– MEMB PRO 98 PVG17_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 177– GENE 17 PROTEIN 204 PVG18_HSV11HYPOTHETICAL ICTALURID HERPESVIRUS 1 174– GENE 18 PROTEIN 208PVG22_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 373– 581– 668– 766–GENE 22 PROTEIN 400 622 705 824 PVG24_HSV11 HYPOTHETICAL ICTALURIDHERPESVIRUS 1 31– GENE 24 PROTEIN 58 PVG28_HSV11 HYPOTHETICAL ICTALURIDHERPESVIRUS 1 253– 497– GENE 28 PROTEIN 290 528 PVG34_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 95– GENE 34 PROTEIN 122 PVG37_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 442– GENE 37 PROTEIN 469 PVG39_HSV11HYPOTHETICAL ICTALURID HERPESVIRUS 1 651– 1088– GENE 39 PROTEIN 678 1115PVG46_HSV11 PROBABLE MAJOR ICTALURID HERPESVIRUS 1 142– 346– 897– 973–GLYCOPROTEIN 169 373 924 1007 PVG51_HSV11 HYPOTH GENE 51 ICTALURIDHERPESVIRUS 1 34– 87– MEMBRANE 61 114 PROTEIN PVG56_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 582– GENE 56 PROTEIN 609 PVG63_HSV11HYPOTHETICAL ICTALURID HERPESVIRUS 1 550– GENE 63 PROTEIN 584PVG64_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 477– GENE 64 PROTEIN504 PVG65_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 1213– GENE 65PROTEIN 1251 PVG66_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 362– GENE66 PROTEIN 406 PVG67_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1 1342–GENE 67 PROTEIN 1369 PVG68_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS 1261– GENE 68 PROTEIN 288 PVG72_HSV11 HYPOTHETICAL ICTALURID HERPESVIRUS1 447– GENE 72 PROTEIN 481 PVG75_HSV11 HYPOTHETICAL ICTALURIDHERPESVIRUS 1 381– GENE 75 PROTEIN 422 PVG76_HSV11 HYPOTHETICALICTALURID HERPESVIRUS 1 200– GENE 76 PROTEIN 227 PVTER_HSV11 PROBABLEDNA ICTALURID HERPESVIRUS 1 710– PACKAGING 737 PROTEIN PHEMA_IAHSWHEMAGGLUTININ INFLUENZA A VIRUS 29– 194– 388– PRECURSOR(STRAIN)A/EQUINE/SWITZERLAND/ 56 221 457 137/72 PHEMA_IAA1CHEMAGGLUTININ INFLUENZA A VIRUS 387– PRECURSOR (STRAIN A/A1CH/2/68) 453PVNS1_IAALA NONSTRUCTURAL INFLUENZA A VIRUS 171– PROTEIN NS1 (STRAINA/ALASKA/6/77) 198 PVNUC_IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAINA/ANAS 378– ACUTA/PRIMORJE/695/76) 405 PRRP2_IAANN RNA-DIRECTEDINFLUENZA A VIRUS 119– RNA POL SUB P2 (STRAIN A/ANN ARBOR/6/60) 146PVNS1_IAANN NONSTRUCTURAL INFLUENZA A VIRUS 171– PROTEIN NS1 (STRAINA/ANN ARBOR/6/60) 198 PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS 378–(STRAIN A/ANN ARBOR/6/60) 405 PHEMA_IABAN HEMAGGLUTININ INFLUENZA AVIRUS 24– 371– PRECURSOR (STRAIN A/BANGKOK/1/79) 51 437 PNRAM_IABDANEURAMINIDASE INFLUENZA A VIRUS (STRAIN 47– A/BLACK DUCK/AUSTRALIA/ 81702/78) PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAINA/BRAZIL/11/78) 405 PHEMA_IABUD HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN381– PRECURSOR A/BUDGERIGAR/HOKKAIDO/1/77) 451 PRRP3_IABUD RNA-DIRECTEDINFLUENZA A VIRUS (STRAIN 537– RNA POL SUB P3A/BUDGERIGAR/HOKKAIDO/1/77) 567 PVNUC_IABUD NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 378– A/BUDGERIGAR/HOKKAIDO/1/77) 405 PVNUC_IACALNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/CALIFORNIA/10/78) 405PNRAM_IACAO NEURAMINIDASE INFLUENZA A VIRUS 33– (STRAINA/CAMEL/MONGOLIA/82 64 PHEMA_IACAO HEMAGGLUTININ INFLUENZA A VIRUS 9–(STRAIN A/CAMEL/MONGOLIA/82) 36 PHEMA_IACKA HEMAGGLUTININ INFLUENZA AVIRUS 381– PRECURSOR (STRAIN A/CHICKEN/ALABAMA/1/75) 451 PHEMA_IACKGHEMAGGLUTININ INFLUENZA A VIRUS 31– 382– 494– PRECURSOR (STRAINA/CHICKEN/GERMANY/N/49) 58 441 528 PVNS1_IACKG NONSTRUCTURAL INFLUENZA AVIRUS 171– PROTEIN NS1 (STRAIN A/CHICKEN/GERMANY/N/49) 198 PVNUC_IACKGNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/CHICKEN/GERMANY/N/49) 405PVNS1_IACKJ NONSTRUCTURAL INFLUENZA A VIRUS 168– PROTEIN NS1 (STRAINA/CHICKEN/JAPAN/24) 195 PHEMA_IACKP HEMAGGLUTININ INFLUENZA A VIRUS 396–PRECURSOR (STRAIN A/CHICKEN/ 426 PENNSYLVANIA/1/83) PVNUC_IACKPNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/CHICKEN/ 405PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ INFLUENZA A VIRUS 396–PRECURSOR (STRAIN A/CHICKEN/ 426 PENNSYLVANIA/1370/83) PHEMA_IACKVHEMAGGLUTININ INFLUENZA A VIRUS 119– 384– PRECURSOR (STRAIN A/CHICKEN/146 443 VICTORIA/1/85) PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS 16–50– (STRAIN A/CHILE/1/83) 43 91 PRRP3_IACHI RNA-DIRECTED INFLUENZA AVIRUS 331– RNA POL SUB P3 (STRAIN A/CHILE/1/83) 358 PVNS1_IACHINONSTRUCTURAL INFLUENZA A VIRUS 171– PROTEIN NS1 (STRAIN A/CHILE/1/83)198 PHEMA_IADA1 HEMAGGLUTININ INFLUENZA A VIRUS 381– PRECURSOR (STRAINA/DUCK/ALBERTA/28/76) 451 PNRAM_IADA1 NEURAMINIDASE INFLUENZA A VIRUS51– (STRAIN A/DUCK/ALBERTA/28/76) 81 PHEMA_IADA4 HEMAGGLUTININ INFLUENZAA VIRUS 29– 418– PRECURSOR (STRAIN A/DUCK/ALBERTA/35/76) 56 478PHEMA_IADA2 HEMAGGLUTININ INFLUENZA A VIRUS 423– 499– PRECURSOR (STRAINA/DUCK/ALBERTA/60/76) 453 543 PVNS1_IADA2 NONSTRUCTURAL INFLUENZA AVIRUS 171– PROTEIN NS1 (STRAIN A/DUCK/ALBERTA/60/76) 198 PHEMA_IADA3HEMAGGLUTININ INFLUENZA A VIRUS 387– PRECURSOR (STRAINA/DUCK/ALBERTA/78/76) 453 PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS378– (STRAIN A/DUCK/AUSTRALIA/749/80) 405 PVNUC_IADBE NUCLEOPROTEININFLUENZA A VIRUS 378– (STRAIN A/DUCK/BEIJING/1/78) 405 PHEMA_IADCZHEMAGGLUTININ INFLUENZA A VIRUS 381– PRECURSOR (STRAIN A/DUCK/ 451CZECHOSLOVAKIA/56) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS 378–(STRAIN A/DUCK/ 405 CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEININFLUENZA A VIRUS 378– (STRAIN A/DUCK/ENGLAND/1/) 405 PHEMA_IADE1HEMAGGLUTININ INFLUENZA A VIRUS 21– 402– 506– PRECURSOR (STRAINA/DUCK/ENGLAND/1/56) 55 453 533 PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA AVIRUS 378– (STRAIN A/DUCK/ENGLAND/1/62) 405 PNRAM_IADGE NEURAMINIDASEINFLUENZA A VIRUS 21– (STRAIN A/DUCK/GERMANY/49) 48 PHEMA_IADH7HEMMAGGLUTININ INFLUENZA A VIRUS 371– PRECURSOR (STRAINA/DUCK/HOKKAIDO/10/85) 437 PHEMA_IADH5 HEMAGGLUTININ INFLUENZA A VIRUS371– PRECURSOR (STRAIN A/DUCK/HOKKAIDO/21/82) 437 PHEMA_IADH3HEMAGGLUTININ INFLUENZA A VIRUS 371– PRECURSOR (STRAINA/DUCK/HOKKAIDO/33/80) 437 PHEMA_IADH1 HEMAGGLUTININ INFLUENZA A VIRUS371– PRECURSOR (STRAIN A/DUCK/HOKKAIDO/5/77) 437 PHEMA_IADH4HEMAGGLUTININ INFLUENZA A VIRUS 371– PRECURSOR (STRAINA/DUCK/HOKKAIDO/7/82) 437 PHEMA_IADH2 HEMAGGLUTININ INFLUENZA A VIRUS371– PRECURSOR (STRAIN A/DUCK/HOKKAIDO/8/80) 437 PRRP2_LADH2RNA-DIRECTED INFLUENZA A VIRUS 119– RNA POL SUB P2 (STRAINA/DUCK/HOKKAIDO/8/80) 146 PHEMA_IADH6 HEMAGGLUTININ INFLUENZA A VIRUS371– PRECURSOR (STRAIN A/DUCK/HOKKAIDO/9/85) 437 PVNUC_IADHKNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/DUCK/HONG KONG/7/75) 405PHEMA_IADIR HEMAGGLUTININ INFLUENZA A VIRUS 415– PRECURSOR (STRAINA/DUCK/IRELAND/113/83) 445 PHEMA_IADMA HEMAGGLUTININ INFLUENZA A VIRUS31– PRECURSOR (STRAIN A/DUCK/MANITOBA/1/53) 58 PVNUC_IADMA NUCLEOPROTEININFLUENZA A VIRUS 378– (STRAIN A/DUCK/MANITOBA/1/53) 405 PHEMA_IADM2HEMAGGLUTININ INFLUENZA A VIRUS 21– PRECURSOR (STRAINA/DUCK/MEMPHIS/546/76) 56 PHEMA_IADM2 HEMAGGLUTININ INFLUENZA A VIRUS387– PRECURSOR (STRAIN A/DUCK/MEMPHIS/928/74) 453 PVNUC_IADM2NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/DUCK/MEMPHIS/928/74) 405PHEMA_IADNY HEMAGGLUTININ INFLUENZA A VIRUS 21– PRECURSOR (STRAINA/DUCK/NEW YORK/12/78) 55 PHEMA_IADNZ HEMAGGLUTININ INFLUENZA A VIRUS381– PRECURSOR (STRAIN A/DUCK/ 451 NEW ZEALAND/31/76) PVNUC_IADNZNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/DUCK/ 405 NEWZEALAND/31/76) PHEMA_IADU1 HEMAGGLUTININ INFLUENZA A VIRUS 21– PRECURSOR(STRAIN A/DUCK/UKRAINE/1/60) 55 PHEMA_IADU3 HEMAGGLUTININ INFLUENZA AVIRUS 387– PRECURSOR (STRAIN A/DUCK/UKRAINE/1/63) 453 PVNUC_IADU2NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/DUCK/UKRAINE/2/60) 405PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAINA/ENGLAND/19/55) 405 PHEMA_IAEN7 HEMAGGLUTININ INFLUENZA A VIRUS 40–387– PRECURSOR (STRAIN A/ENGLAND/321/77) 67 453 PHEMA_IAEN6HEMAGGLUTININ INFLUENZA A VIRUS 24– PRECURSOR (STRAIN A/ENGLAND/878/69)51 PHEMA_IAHAL HEMAGGLUTININ INFLUENZA A VIRUS 386– PRECURSOR (STRAINA/EQUINE/ALGIERS/72) 452 PHEMA_IAHCD HEMAGGLUTININ INFLUENZA A VIRUS 29–194– 388– PRECURSOR (STRAIN A/EQUINE/ 56 221 457 C DETROIT/1/64)PHEMA_IAHC6 HEMAGGLUTININ INFLUENZA A VIRUS 29– 194– 388– PRECURSOR(STRAIN A/EQUINE/ 56 221 457 CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTINININFLUENZA A VIRUS 29– 194– 388– PRECURSOR (STRAIN A/EQUINE/ 56 221 457CAMBRIDGE/1/73) PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS 197– 386–(STRAIN A/EQUINE/COR/16/74) 224 413 PHEMA_IAHDE HEMAGGLUTININ INFLUENZAA VIRUS 29– 194– 388– PRECURSOR (STRAIN A/EQUINE/DETROIT/1/64) 56 221457 PHEMA_IAHFO HEMAGGLUTININ INFLUENZA A VIRUS 386– PRECURSOR (STRAINA/EQUINE/ 452 FONTAINEBLEAU/76) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA AVIRUS 378– (STRAIN A/EQUINE/JILLIN/1/89) 405 PNRAM_IAHK1 NEURAMINIDASEINFLUENZA A VIRUS 5– 46– 364– (STRAIN A/EQUINE/KENTUCKY/1/81) 44 76 400PHEMA_IAHK7 HEMAGGLUTININ INFLUENZA A VIRUS 386– PRECURSOR (STRAINA/EQUINE/KENTUCKY/1/87) 452 PHEMA_IAHK6 HEMAGGLUTININ INFLUENZA A VIRUS386– PRECURSOR (STRAIN A/EQUINE/KENTUCKY/2/86) 452 PHEMA_IAHLEHEMAGGLUTININ INFLUENZA A VIRUS 29– 194– 388– PRECURSOR (STRAINA/EQUINE/ 56 221 457 LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ INFLUENZAA VIRUS 29– 194– 388– PRECURSOR (STRAIN A/EQUINE/ 56 221 457LONDON/1416/73) PRRP2_IAHLO RNA-DIRECTED INFLUENZA A VIRUS 119– RNA POLSUB P2 (STRAIN A/EQUINE/ 146 LONDON/1416/73) PVNUC_IAHLO NUCLEOPROTEININFLUENZA A VIRUS 378– (STRAIN A/EQUINE/ 405 LONDON/1416/73) PHEMA_IAHMIHEMAGGLUTININ INFLUENZA A VIRUS 386– PRECURSOR (STRAINA/EQUINE/MIAMI/1/63) 452 PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS378– (STRAIN A/EQUINE/MIAMI/1/63) 405 PHEMA_IAHNN HEMAGGLUTINININFLUENZA A VIRUS 29– 194– 388– PRECURSOR (STRAIN A/EQUINE/ 56 221 457NEW MARKET/1/77) PHEMA_IAHNM HEMAGGLUTININ INFLUENZA A VIRUS 386–PRECURSOR (STRAIN A/EQUINE/NEW MARKET/76) 452 PHEMA_IAHPR HEMAGGLUTINININFLUENZA A VIRUS 29– 194– 388– PRECURSOR (STRAIN A/EQUINE/PRAGUE/1/56)56 221 457 PRRP3_IAHPR RNA-DIRECTED INFLUENZA A VIRUS 331– 480– RNA POLSUB P3 (STRAIN A/EQUINE/PRAGUE/1/56) 361 507 PVNUC_IAHPR NUCLEOPROTEININFLUENZA A VIRUS 378– (STRAIN A/EQUINE/PRAGUE/1/56) 405 PHEMA_IAHROHEMAGGLUTININ INFLUENZA A VIRUS 386– PRECURSOR (STRAINA/EQUINE/ROMANIA/S80) 452 PHEMA_IAHSA HEMAGGLUTININ INFLUENZA A VIRUS386– PRECURSOR (STRAIN A/EQUINE/SANTIAGO/1/85) 452 PHEMA_IAHSPHEMAGGLUTININ INFLUENZA A VIRUS 29– 194– 388– PRECURSOR (STRAINA/EQUINE/SAO PAULO/1/76) 56 221 457 PHEMA_IAHTE HEMAGGLUTININ INFLUENZAA VIRUS 386– PRECURSOR (STRAIN A/EQUINE/TENNESSEE/5/86) 452 PRRP2_IAHTERNA-DIRECTED INFLUENZA A VIRUS 119– RNA POL SUB P2 (STRAINA/EQUINE/TENNESSEE/5/86) 146 PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS378– (STRAIN A/EQUINE/ 405 TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTINININFLUENZA A VIRUS 386– PRECURSOR (STRAIN A/EQUINE/TOKYO/71) 455PHEMA_IAHUR HEMAGGLUTININ INFLUENZA A VIRUS 386– PRECURSOR (STRAINA/EQUINE/URUGUAY/1/63) 452 PVNS1_IAFOM NONSTRUCTURAL INFLUENZA A VIRUS171– PROTEIN NS1 (STRAIN A/FORT MONMOUTH/1/47) 198 PVNUC_IAFOMNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/FORT MONMOUTH/1/47) 405PVNS1_IAFOW NONSTRUCTURAL INFLUENZA A VIRUS 171– PROTEIN NS1 (STRAINA/FORT WARREN/1/50) 198 PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS 378–(STRAIN A/FORT WARREN/1/50) 405 PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA AVIRUS 378– (STRAIN A/FOWL PLAGUE 405 VIRUS/DOBSON/DUTCH/27) PHEMA_IAFPRHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN A/ 177– 384– PRECURSOR FOWLPLAGUE VIRUS/ 221 442 ROSTOCK/34) PRRP2_IAFPR RNA-DIRECTED INFLUENZA AVIRUS (STRAIN A/ 119– RNA POL SUB P2 FOWL PLAGUE VIRUS/ 146 ROSTOCK/34)PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378– FOWL PLAGUEVIRUS/ROSTOCK/34) 405 PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS(STRAIN A/ 10– 52– 197– FOWL PLAGUE VIRUS/WEYBRIDGE) 48 80 224PHEMA_IAGRE HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN A/ 381– PRECURSORGREY TEAL/AUSTRALIA/2/79) 451 PVNUC_IAURE NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/ 378– GREY TEAL/AUSTRALIA/2/79) 405 PHEMA_IAGUAHEMAGGLUTININ INFLUENZA A VIRUS 504– PRECURSOR (STRAIN A/GULL/ASTRAKHAN/531 227/84) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAINA/GULL/ASTRAKHAN/ 405 227/84) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA AVIRUS 378– (STRAIN A/GULL/MARYLAND/ 405 1815/79) PVNUC_IAGU3NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/GULL/MARYLAND/ 4051824/78) PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAINA/GULL/MARYLAND/5/77) 405 PHEMA_IAGU2 HEMAGGLUTININ INFLUENZA A VIRUS505– PRECURSOR (STRAIN A/GULL/MARYLAND/ 532 704/77) PRRP2_IAGU2RNA-DIRECTED INFLUENZA A VIRUS 119– RNA POL SUB P2 (STRAINA/GULL/MARYLAND/ 146 704/77) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS378– (STRAIN A/GULL/MARYLAND/ 405 704/77) PVNUC_IAGUM NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/GULL/MASSACHUSETTS/26/80) 405PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/GULL/MINNESOTA/945/80) 405 PHEMA_IAHAR HEMAGGLUTININ INFLUENZA A VIRUS29– PRECURSOR (STRAIN A/HARBIN/1/88) 56 PVNUC_IAH1C NUCLEOPROTEININFLUENZA A VIRUS 378– (STRAIN A/HICKOX/40) 405 PVNUC_IAHO1NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/HONG KONG/1/68) 405PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/HONGKONG/5/83) 405 PHEMA_IAJAP HEMAGGLUTININ INFLUENZA A VIRUS 196–PRECURSOR (STRAIN A/JAPAN/305/57) 223 PHEMA_IAKIE HEMAGGLUTINININFLUENZA A VIRUS 29– 425– PRECURSOR (STRAIN A/KIEV/59/79) 56 478PNRAM_IAK1E NEURAMINIDASE INFLUENZA A VIRUS 50– (STRAIN A/KIEV/59/79) 81PVNUC_IAK1E NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/KIEV/59/79)405 PRRP1_IAKOR RNA-DIRECTED INFLUENZA A VIRUS 575– RNA POL SUB P1(STRAIN A/KOREA/426/68) 602 PRRP2_IAKOR RNA-DIRECTED INFLUENZA A VIRUS119– RNA POL SUB P2 (STRAIN A/KOREA/426/68) 146 PRRP2_IALE2 RNA-DIRECTEDINFLUENZA A VIRUS (STRAIN 119– RNA POL SUB P2 A/LENINGRAD/134/17/57) 146PRRP2_IALE1 RNA-DIRECTED INFLUENZA A VIRUS (STRAIN 119– RNA POL SUB P2A/LENINGRAD/134/57) 146 PVNS1_IALE1 NONSTRUCTURAL INFLUENZA A VIRUS(STRAIN 171– PROTEIN NS1 A/LENINGRAD/134/57) 198 PHEMA_IALENHEMAGGLUTININ INFLUENZA A VIRUS 29– 425– PRECURSOR (STRAINA/LENINGRAD/54/1) 56 478 PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS 50–(STRAIN A/LENINGRAD/54/1) 81 PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS378– (STRAIN A/LENINGRAD/54/1) 405 PVNS1_IAMA6 NONSTRUCTURAL INFLUENZA AVIRUS 171– PROTEIN NS1 (STRAIN A/MALLARD/ 198 ALBERTA/88/76) PHEMA_IAMAAHEMAGGLUTININ INFLUENZA A VIRUS 380– PRECURSOR (STRAIN A/MALLARD/ 450ASTRAKHAN/244/82) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS 378–(STRAIN A/MALLARD/ 405 ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTINININFLUENZA A VIRUS 385– PRECURSOR (STRAIN A/MALLARD/ 455ASTRAKHAN/263/82) PRRP2_IAMAN RNA-DIRECTED INFLUENZA A VIRUS 119– RNAPOL SUB P2 (STRAIN A/MALLARD/ 146 NEW YORK/6750/78) PVNUC_IAMANNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/MALLARD/ 405 NEWYORK/6750/78) PHEMA_IAMAO HEMAGGLUTININ INFLUENZA A VIRUS 387– PRECURSOR(STRAIN A/MALLARD/ 453 NEW YORK/6874/78) PHEMA_IAME1 HEMAGGLUTINININFLUENZA A VIRUS 40– 387– PRECURSOR (STRAIN A/MEMPHIS/1/71) 67 453PNRAM_IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16– 50–A/MEMPHIS/1/71H A/ 43 81 BELLAMY/42N) PHEMA_IAME2 HEMAGGLUTINININFLUENZA A VIRUS 40– 387– PRECURSOR (STRAIN A/MEMPHIS/102/72) 67 453PHEMA_IAME6 HEMAGGLUTININ INFLUENZA A VIRUS 24– 371– PRECURSOR (STRAINA/MEMPHIS/6/86) 51 437 PHEMA_IAMIN HEMAGGLUTININ INFLUENZA A VIRUS 31–382– PRECURSOR (STRAIN A/MINK/SWEDEN/84) 58 441 PVNUC_IAMINNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/MINK/SWEDEN/84) 405PVNUC_IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/NEWJERSEY/8/76) 405 PHEMA_IANT6 HEMAGGLUTININ INFLUENZA A VIRUS 387–PRECURSOR (STRAIN A/NT/60/68) 453 PRRP2_IANT6 RNA-DIRECTED INFLUENZA AVIRUS 119– RNA POL SUB P2 (STRAIN A/NT/60/6B) 146 PVNUC_IANT6NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/NT/60/68) 405 PVNUC_IAOH1NUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/OHIO/4/83) 405PNRAM_IAPAR NEURAMINIDASE INFLUENZA A VIRUS 16– 50– (STRAINA/PARROT/ULSTER/73) 43 81 PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS378– (STRAIN A/PARROT/ULSTER/73) 405 PHEMA_IAP1L HEMAGGLUTININ INFLUENZAA VIRUS 505– PRECURSOR (STRAIN A/PILOT WHALE/ 534 MAINE/328/84)PRRP2_IAP1O RNA-DIRECTED INFLUENZA A VIRUS 119– RNA POL SUB P2 (STRAINA/PINTAIL/ 146 ALBERTA/119/79) PVNS1_IAP11 NONSTRUCTURAL INFLUENZA AVIRUS 171– PROTEIN NS1 (STRAIN A/PINTAIL/ 198 ALBERTA/121/79)PVNS1_IAP13 NONSTRUCTURAL INFLUENZA A VIRUS 171– PROTEIN NS1 (STRAINA/PINTAIL/ 198 ALBERTA/358/79) PHEMA_IAPUE HEMAGGLUTININ INFLUENZA AVIRUS 29– 425– PRECURSOR (STRAIN A/PUERTO RICO/8/34) 56 478 PNRAM_IAPUENEURAMINIDASE INFLUENZA A VIRUS 16– (STRAIN A/PUERTO RICO/8/34) 43PRRP2_IAPUE RNA-DIRECTED INFLUENZA A VIRUS 119– RNA POL SUB P2 (STRAINA/PUERTO RICO/B/34) 146 PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS 378–(STRAIN A/PUERTO RICO/8/34) 405 PHEMA_IAQU7 HEMAGGLUTININ INFLUENZA AVIRUS 24– PRECURSOR (STRAIN A/QU/7/70) 51 PHEMA_IARUD HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 381– PRECURSOR A/RUDDY TURNSTONE/ 451 NEWJERSEY/47/85) PRRP2_IARUD RNA-DIRECTED INFLUENZA A VIRUS (STRAIN 119–RNA POL SUB P2 A/RUDDY TURNSTONE/ 146 NEW JERSEY/47/85) PVNUC_IARUDNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/RUDDY TURNSTONE/ 405 NEWJERSEY/47/85) PNRAM_IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49–A/RUDDY TURNSTONE/ 88 NEW JERSEY/60/85) PVNUC_IASEO NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SEAL/MASSACHUSETTS/1/80) 405PHEMA_IASE2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 381– PRECURSORA/SEAL/MASSACHUSETTS/133/82) 451 PHEMA_IASH2 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 28– 160– 506– PRECURSOR A/SHEARWATER/AUSTRALIA/72) 56 187547 PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SHEARWATER/AUSTRALIA/72) 405 PRRP2_IASIN RNA-DIRECTED INFLUENZA AVIRUS 119– RNA POL SUB P2 (STRAIN A/SINGAPORE/1/57) 146 PVNUC_IASINNUCLEOPROTEIN INFLUENZA A VIRUS 378– (STRAIN A/SINGAPORE/1/57) 405PHEMA_IASTA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 119– 384– PRECURSORA/STARLING/VICTORIA/5156/85) 146 443 PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN 378– A/SWINE/29/37) 405 PVNUC_IAZ4I NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SWINE/41/49) 405 PVNUC_IAZCANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/SWINE/CAMBRIDGE/1/35) 405PHEMA_IAZCO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 40– 87– PRECURSORA/SWINE/COLORADO/1/77) 67 453 PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 378– A/SWINE/DANDONG/9/83) 405 PVNUC_IAZGE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SWINE/GERMANY/2/81) 405 PHEMA_IAZH3HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 371– PRECURSOR A/SWINE/HONGKONG/126/82) 437 PRRP2_IAZH3 RNA-DIRECTED INFLUENZA A VIRUS (STRAIN 119–RNA POL SUB P2 A/SWINE/HONG KONG/126/82) 146 PVNUC_IAZH3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SWINE/HONG KONG/126/82) 405 PVNUC_IAZH4NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/SWINE/HONG KONG/127/82)405 PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SWINE/HONG KONG/6/76) 405 PHEMA_IAZH2 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 371– PRECURSOR A/SWINE/HONG KONG/81/78) 437 PRRP2_IAZH2RNA-DIRECTED INFLUENZA A VIRUS (STRAIN 119– RNA POL SUB P2 A/SWINE/HONGKONG/81/71) 146 PHEMA_IAZ1N HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 418–506– PRECURSOR A/SWINE/INDIANA/1726/88) 478 547 PRRP2_IAZ11 RNA-DIRECTEDINFLUENZA A VIRUS (STRAIN 119– RNA POL SUB P2 A/SWINE/IOWA/15/30) 146PVNUC_IAZ11 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SWINE/IOWA/15/30) 405 PVNUC_IAZ12 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378– A/SWINE/IOWA/1976/31) 405 PVNUC_IAZ13 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SWINE/IOWA/46) 405 PVNUC_IAZ13NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/SWINE/ITALY/141/81) 405PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SWINE/ITALY/2/79) 405 PVNUC_IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378– A/SWINE/ITALY/437/76) 405 PVNUC_IAZJ4 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SWINE/ITALY/839/89) 405 PVNUC_IAZJANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/SWINE/JAMESBURG/42) 405PVNUC_IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/SWINE/MAY/54)405 PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SWINE/NETHERLANDS/12/85) 405 PHEMA_IAZNJ HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 418– 506– PRECURSOR A/SWINE/NEW JERSEY/11/76) 478 547PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SWINE/OHIO/23/35) 405 PVNUC_IAZON NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378– A/SWINE/ONTARIO/2/81) 405 PRRP3_IAZTE RNA-DIRECTEDINFLUENZA A VIRUS (STRAIN 487– RNA POL SUB P3 A/SWINE/TENNESSEE/24/77)514 PVNUC_IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/SWINE/TENNESSEE/24/77) 405 PRRP2_IAZTF RNA-DIRECTED INFLUENZA A VIRUS(STRAIN 119– RNA POL SUB P2 A/SWINE/TENNESSEE/26/77) 146 PHEMA_IAZUKHEMAGGLUTTNIN INFLUENZA A VIRUS (STRAIN 387– PRECURSORA/SWINE/UKKEL/1/84) 453 PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378– A/SWINE/WISCONSIN/1/57) 405 PVNUC_IAZW2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/SWINE/WISCONSIN/1/61) 405 PHEMA_IATA1HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 29– PRECURSOR A/TAIWAN/1/86) 56PVNUC_IATE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/TEAL/ICELAND/29/80) 405 PHEMA_IATRA HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 21– PRECURSOR A/TERN/AUSTRALIA/G70C/75) 55 PNRAM_IATRANEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49– A/TERN/AUSTRALIA/G70C/75) 82PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/TERN/SOUTHAFRICA/61) 405 PVNS1_IATRT NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 171–PROTEIN NS1 A/TERN/TURKMENIA/18/72) 198 PVNUC_IATRT NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/TERN/TURKMENIA/18/72) 405 PVNUC_IATX7NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/TEXAS/1/77) 405PVNS1_IATKB NONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 171– PROTEIN NS1A/TURKEY/BETHLEHEM-GLILIT/ 198 1492-B/82) PVNS1_IATKC NONSTRUCTURALINFLUENZA A VIRUS (STRAIN 171– PROTEIN NS1 A/TURKEY/CANADA/63) 198PHEMA_IATK1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 415– PRECURSORA/TURKEY/IRELAND/1378/83) 445 PVNUC_IATKN NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 378– A/TURKEY/MINNESOTA/1661/81) 405 PHEMA_IATKMHEMAGGLUTTNIN INFLUENZA A VIRUS (STRAIN 381– PRECURSORA/TURKEY/MINNESOTA/833/80) 451 PRRP2_IATKM RNA-DIRECTED INFLUENZA AVIRUS (STRAIN 119– RNA POL SUB P2 A/TURKEY/MINNESOTA/833/80) 146PHEMA_IATKP HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 424– 493– PRECURSORA/TURKEY/ONTARIO/6118/68) 454 539 PHEMA_IATKO HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 507– PRECURSOR A/TURKEY/ONTARIO/7732/66) 534 PVNUC_IATKONUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/TURKEY/ONTARIO/7732/66)405 PHEMA_IATKR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 32– 194– 381–PRECURSOR A/TURKEY/OREGON/71) 62 221 422 PVNS2_IATKR NONSTRUCTURALINFLUENZA A VIRUS (STRAIN 87– PROTEIN NS2 A/TURKEY/OREGON/71) 114PHEMA_IATKW HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 419– 500– PRECURSORA/TURKEY/WISCONSIN/1/66) 449 536 PHEMA_IAUDO HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 40– 387– PRECURSOR A/UDORN/307/72) 67 453 PVNS1_IAUDONONSTRUCTURAL INFLUENZA A VIRUS (STRAIN 171– PROTEIN NS1 A/UDORN/307/72)198 PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/UDORN/307/72) 405 PHEMA_IAUSS HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN29– 425– PRECURSOR A/USSR/90/77) 56 478 PNRAM_IAUSS NEURAMINIDASEINFLUENZA A VIRUS (STRAIN 50– A/USSR/90/77) 81 PVNS1_IAUSS NONSTRUCTURALINFLUENZA A VIRUS (STRAIN 171– PROTEIN NS1 A/USSR/90/77) 198 PVNUC_IAUSSNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/USSR/90/77) 405PHEMA_IAV17 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 41– 388– PRECURSORA/VICTORIA/3/75) 68 454 PRRP2_IAV17 RNA-DIRECTED INFLUENZA A VIRUS(STRAIN 119– 327– RNA POL SUB P2 A/VICTORIA/3/75) 146 354 PVNUC_IAV16NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/VICTORIA/5/68) 405PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49–A/WHALE/MAINE/1/84) 88 PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378– A/WHALE/MAINE/328/84) 405 PVNUC_IAWHP NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378– A/WHALE/PACIFIC OCEAN/19/76) 405PHEMA_IAWIL HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 424– PRECURSORA/WILSON-SMITH/33) 477 PNRAM_IAWIL NEURAMINIDASE INFLUENZA A VIRUS(STRAIN 16– A/WILSON-SMITH/33) 43 PRRP2_IAWIL RNA-DIRECTED INFLUENZA AVIRUS (STRAIN 119– RNA POL SUB P2 A/WILSON-SMITH/33) 146 PVNUC_IAWILNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378– A/WILSON-SMITH/33) 405PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378–A/WISCONSIN/3523/88) 405 PHEMA_IAXIA HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 29– PRECURSOR A/XIANFENG/3/89) 56 PRRP2_INBAC RNA-DIRECTEDINFLUENZA B VIRUS (STRAIN 157– RNA POL SUB P2 B/ANN ARBOR/1/66 194[COLD-ADAPTED]) PRRP3_INBAC RNA-DIRECTED INFLUENZA B VIRUS (STRAIN 2–472– RNA POL SUB P3 B/ANN ARBOR/1/66 33 509 [COLD-ADAPTED]) PRRP2_INBADRNA-DIRECTED INFLUENZA B VIRUS (STRAIN 164– RNA POL SUB P2 B/ANNARBOR/1/66 (WILD-TYPE) 194 PRRP3_INBAD RNA-DIRECTED INFLUENZA B VIRUS(STRAIN 2– 472– RNA POL SUB P3 B/ANN ARBOR/1/66 (WILD-TYPE) 33 509PHEMA_INBBE HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 400– 439– PRECURSORB/BEIJING/1/87) 431 483 PHEMA_INBBO HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 390– 429– PRECURSOR B/BONN/43) 421 473 PHEMA_INBEN HEMAGGLUTINTNINFLUENZA B VIRUS (STRAIN 398– 437– PRECURSOR B/ENGLAND/222/82) 429 481PHEMA_INBHK HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 391– 429– PRECURSORB/HONG KONG/8/73) 418 473 PHEMA_INBLE HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 399– 438– PRECURSOR B/LEE/40) 430 482 PNRAM_INBLE NEURAMINIDASEINFLUENZA B VIRUS (STRAIN 4– B/LEE/40) 35 PVNS2_INBLE NONSTRUCTURALINFLUENZA B VIRUS (STRAIN 51– PROTEIN NS2 B/LEE/40) 78 PHEMA_INBMDHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 389– 428– PRECURSORB/MARYLAND/59) 420 472 PHEMA_INBME HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 393– 432– PRECURSOR B/MEMPHIS/6/86) 424 476 PHEMA_INBORHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 398– 437– PRECURSORB/OREGON/5/80) 429 481 PVNS1_INBPA NONSTRUCTURAL INFLUENZA B VIRUS(STRAIN 171– PROTEIN NS1 B/PA/79) 198 PHEMA_INBSI HEMAGGLUTINININFLUENZA B VIRUS (STRAIN 398– 437– PRECURSOR B/SINGAPORE/222/79) 429481 PRRP2_INBSI RNA-DIRECTED INFLUENZA B VIRUS (STRAIN 157– RNA POL SUBP2 B/SINGAPORE/222/79) 194 PHEMA_INBUS HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 391– 430– PRECURSOR B/USSR/100/83) 422 474 PHEMA_INBVKHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 400– 439– PRECURSORB/VICTORIA/2/87) 431 483 PHEMA_INBVI HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 393– 432– PRECURSOR B/VICTORIA/3/85) 424 476 PVNS2_INBYANONSTRUCTURAL INFLUENZA B VIRUS (STRAIN 51– PROTEIN NS2 B/YAMAGATA/1/73)78 PRRP3_INCBE RNA-DIRECTED INFLUENZA C VIRUS (STRAIN 509– RNA POL SUBP3 C/BERLIN/1/85) 536 PHEMA_INCCA HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 495– PRECURSOR C/CALIFORNIA/78) 571 PVNUC_INCCA NUCLEOPROTEININFLUENZA C VIRUS (STRAIN 99– 416– 451– C/CALIFORNIA/78) 126 443 478PHEMA_INCEN HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 483– PRECURSORC/ENGLAND/892/83) 559 PHEMA_INCGL HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 483– PRECURSOR C/GREAT LAKES/1167/54) 559 PHEMA_INCHYHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 482– PRECURSOR C/HYOGO/1/83) 558PRRP3_INCH RNA-DIRECTED INFLUENZA C VIRUS (STRAIN 509– RNA POL SUB P3C/JJ/50) 536 PVMAT_INCJJ MATRIX (M) INFLUENZA C VIRUS (STRAIN 151–PROTEIN C/JJ/50) 185 PVNS2_INCJJ NONSTRUCTURAL INFLUENZA C VIRUS (STRAIN71– PROTEIN NS2 C/JJ/50) 98 PHEMA_INCJH HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 496– PRECURSOR C/JOHANNESBURG/1/66) 572 PHEMA_INGKYHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 482– PRECURSOR C/KYOTO/41/82)558 PHEMA_INCMI HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 482– PRECURSORC/MISSISSIPPI/80) 558 PHEMA_INONA HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 482– PRECURSOR C/NARA/82) 558 PHEMA_INCP1 HEMAGGLUTINININFLUENZA C VIRUS (STRAIN 483– PRECURSOR C/PIG/BEIJING/10/81) 559PHEMA_INGP2 HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 483– PRECURSORC/PIG/BEIJING/115/81) 559 PHEMA_INCP3 HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 483– PRECURSOR C/PIG/BEIJING/439/82) 559 PHEMA_INCTAHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 483– PRECURSOR C/TAYLOR/1233/47)559 PHEMA_INCYA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 483– PRECURSORC/YAMAGATA/10/81) 559 PENV_MLVK1 ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA40– VIRUS 81 PVGLB_HSVMD GLYCOPROTEIN B MAREK'S DISEASE HERPESVIRUS 93–352– PRECURSOR (STRAIN RB-1B) 120 379 PENV_MCFF ENV POLYPROTEIN MINKCELL FOCUS-FORMING 473– MURINE LEUKEMIA VIRUS 512 PENV_MCFF3 ENVPOLYPROTEIN MINK CELL FOCUS-FORMING 488– MURINE LEUKEMIA VIRUS 515(ISOLATE CI-3) PENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA 502–VIRUS 543 PDNBI_MCMVS MAJOR DNA- MURINE CYTOMEGALOVIRUS 584– BINDING(STRAIN SMITH) 618 PROTEIN PIC18_MCMVS PROB PROC & MURINECYTOMEGALOVIRUS 661– TRANSPORT PRO (STRAIN SMITH) 691 PVGLB_MCMVSGLYCOPROTEIN B MURINE CYTOMEGALOVIRUS 381– 441– PRECURSOR (STRAIN SMITH)408 475 VIE1_MCMVS IMMEDIATE-EARLY MURINE CYTOMEGALOVIRUS 261– PROTEIN 1(STRAIN SMITH) 288 PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE PAPILLOMA 267–327– VIRUS TYPE 1 294 361 PVE5_PCPV1 PROBABLE E5 PYGMY CHIMPANZEEPAPILLOMA 35– PROTEIN VIRUS TYPE 1 62 PENV_MLVRD ENV POLYPROTEINRADIATION MURINE LEUKEMIA 497– VIRUS 538 PPOL_MLVRD POL POLYPROTEINRADIATION MURINE LEUKEMIA 716– 805– VIRUS 743 832 PENV_MLVRK ENVPOLYPROTEIN RADIATION MURINE LEUKEMIA 497– VIRUS (STRAIN KAPLAN) 538PPOL_MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA 101– 190– VIRUS(STRAIN KAPLAN) 128 217 PDNB1_SCMVC MAJOR DNA- SIMIAN CYTOMEGALOVIRUS435– 532– BINDING (STRAIN COLBURN) 462 559 PROTEIN PPOLG_HPAVS GENOMESIMIAN HEPATITIS A VIRUS 207– 1025– 1115– POLYPROTEIN (STRAIN AGM-27)241 1052 1192 PPOLG_HPAVT GENOME SIMIAN HEPATITIS A VIRUS 203–POLYPROTEIN (STRAIN CY-145) 237 PENV_SIVA1 ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY 269– 561– 592– 652– 697– VIRUS (AGM155 ISOLATE) 310 588619 679 724 PPOL_SIVA1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 431– 547–637– VIRUS (AGM155 ISOLATE) 458 574 671 PPOL_SIVA2 POL POLYPROTEINSIMIAN IMMUNODEFICIENCY 45– VIRUS (AGM266 ISOLATE) 72 PENV_SIVAG ENVPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 270– 566– 597– 658– 703– VIRUS (AGM3ISOLATE) 301 593 624 685 730 PPOL_SIVAG POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 436– 482– 642– VIRUS (AGM3 ISOLATE) 463 516 669PPOL_SIVA3 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 71– VIRUS (AGM385ISOLATE) 98 PENV_SIVS4 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 281– 553–642– 691– VIRUS (F236/SMI14 ISOLATE) 308 612 669 718 PGAG_SIVS4 GAGPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 88– VIRUS (F236/SMI14 ISOLATE) 115PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 496– VIRUS(F236/SMI14 ISOLATE) 523 PENV_SIVA1 ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY 257– 336– 548– 634– VIRUS (ISOLATE AGM/CLONE 291 372603 708 GRI-1) PGAG_SIVA1 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 473–VIRUS (ISOLATE AGM/CLONE 507 GRI-1) PNEF_SIVA1 NEGATIVE FACTOR SIMIANIMMUNODEFICIENCY 96– VIRUS (ISOLATE AGM/CLONE 137 GRI-1) PPOL_SIVA1 POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 478– VIRUS (ISOLATE AGM/CLONE 515GRI-1) VIF_SIVA1 VIRION SIMIAN IMMUNODEFICIENCY 2– INFECTIVITY VIRUS(ISOLATE AGM/CLONE 36 FACTOR GRI-1) PENV_SIVGB ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY 8– 158– 589– 784– VIRUS (ISOLATE GB1) 35 185 650 816PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 227– 636– VIRUS(ISOLATE GB1) 254 670 PENV_SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY553– VIRUS (K6W ISOLATE) 608 PGAG_SIVMX GAG POLYPROTEIN SIMIANIMMUNODEFICIENCY 88– VIRUS (K6W ISOLATE) 115 PPOL_SIVMK POL POLYPROTEINSIMIAN IMMUNODEFICIENCY 533– VIRUS (K6W ISOLATE) 560 PENV_SIVML ENVPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 549– VIRUS (K78 ISOLATE) 608PENV_SIVM1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 120– 550– 671– VIRUS(MM142-8) ISOLATE) 150 609 715 PPOL_SIVM1 POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 533– VIRUS (MM142-8) ISOLATE) 560 PENV_SIVM2 ENVPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 156– 277– VIRUS (MM251 ISOLATE) 215289 PENV_SIVSP ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 286– 554– 646–VIRUS (PB3/BC13 ISOLATE) 313 595 722 PGAG_SIVSP GAG POLYPROTEIN SIMIANIMMUNODEFICIENCY 88– VIRUS (PBJ/BC13 ISOLATE) 115 PPOL_SIVSP POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 499– VIRUS (PBJ/BC13 ISOLATE) 526PGAG_SIVMS GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88– VIRUS (STMISOLATE) 115 PENV_SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 3– 268–590– 651– VIRUS (TYO-1 ISOLATE) 30 298 617 678 PPOL_SIVAT POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 657– VIRUS (TYO-1 ISOLATE) 691PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY 41– VIRUS (TYO-1 ISOLATE)68 PENV_MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 422– 470PPOL_MPMY POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 574– 670– 612 697PGAG_MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 222– (MPMV) 260PEXON_VZVD ALKALINE VARICELLA-ZOSTER VIRUS 109– EXONUCLEASE (STRAINDUMAS) 139 PHEL1_VZVD PROBABLE VARICELLA-ZOSTER VIRUS 490– 701– HELICASE(STRAIN DUMAS) 517 728 PRIR1_VZVD RIBONUC- VARICELLA-ZOSTER VIRUS 119–DIPHOSPH (STRAIN DUMAS) 146 REDUCT LARGE CHA PTEGU_VZVD LARGE TEGUMENTVARICELLA-ZOSTER VIRUS 1121– 1579– PROTEIN (STRAIN DUMAS) 1158 1609PUL14_VZVD HYPOTHETICAL VARICELLA-ZOSTER VIRUS 64– GENE 46 PROTEIN(STRAIN DUMAS) 101 PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS380– (STRAIN DUMAS) 407 PUL34_VZVD VIRION GENE 24 VARICELLA-ZOSTER VIRUS112– PROTEIN (STRAIN DUMAS) 139 PUL37_VZVD GENE 21 PROTEINVARICELLA-ZOSTER VIRUS 107– 485– 719– 976– (STRAIN DUMAS) 134 512 7461003 PUL41_VZVD HOST SHUTOFF VARICELLA-ZOSTER VIRUS 330– VIRION PROTEIN(STRAIN DUMAS) 364 PUL41_VZVD GENE 15 MEMBRANE VARICELLA-ZOSTER VIRUS129– 312– PROTEIN (STRAIN DUMAS) 156 349 PUL52_VZVD PROB DNA REPVARICELLA-ZOSTER VIRUS 301– GENE 6 PROTEIN (STRAIN DUMAS) 337 PVGLC_VZVDGLYCOPROTEIN VARICELLA-ZOSTER VIRUS 295– GPV (STRAIN DUMAS) 322PVP40_VZVD CAPSID PROTEIN VARICELLA-ZOSTER VIRUS 174– 495– P40 (STRAINDUMAS) 208 522 PVTER_VZVD PROBABLE DNA VARICELLA-ZOSTER VIRUS 394–PACKAGING (STRAIN DUMAS) 421 PROTEIN PVGLC_VZVS GLYCOPROTEINVARICELLA-ZOSTER VIRUS 295– GPV (STRAIN SCOTT) 322 PDPOL_WHV1 DNAPOLYMERASE WOODCHUCK HEPATITIS 285– VIRUS 1 326 PDPOL_WHV59 DNAPOLYMERASE WOODCHUCK HEPATITIS 290– VIRUS 59 331 PDPOL_WHV7 DNAPOLYMERASE WOODCHUCK HEPATITIS 212– 290– VIRUS 7 242 331 PDPOL_WHV8 DNAPOLYMERASE WOODCHUCK HEPATITIS 211– 289– VIRUS 8 241 330 PDPOL_WHV81 DNAPOLYMERASE WOODCHUCK HEPATITIS 212– 290– VIRUS 8 242 331

TABLE VIII 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY FOR ALLPROCARYOTIC PROTEINS PCGENE 107 × 178 × 4 Prokaryotic Sequence FILE NAMEPROTEIN ORGANISM AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8AREA 9 P120K_R1CRI 120 KD SURFACE-EXPOSED RICKETTSIA  83– 240– 355– 638–746– 1168–  PROTEIN RICKETTSII 110 298 382 672 838 1202 P17K_RJCTY 17 KDANTIGEN PRECURSOR RICKETTSIA  67– TYPHI 94 P190K_RJCRI 190 KD ANTIGENPRECURSOR RICKETTSIA 241– 460– 607– 754– 829– 904– 1220–  1544– 1723–(CELL SURFACE) RICKETTSII 268 487 634 781 856 931 1254 1571 1750 2065– 2131–  2096 2168 P22KD_DESMO 22.6 KD PROTEIN DESULFUROCOCCUS  25–  59–120– MOBILIS 52 89 147 P40KD_V1BAN 40 KD PROTEIN PRECURSOR VIBRIO 153–ANGUILLARUM 196 P60IM_ECOLI 60 KD INNER-MEMBRANE ESCHERICHIA 511–PROTEIN COLI 538 P60IM_PROM1 60 KD INNER-MEMBRANE PROTEUS  14– PROTEINMIRABILIS 41 P65KD_ZYMMO 65 KD PROTEIN ZYMOMONAS  95– 444– MOBILIS 122524 P6PGD_BACSU PROB 6-PHOSPHOGLUCONATE BACILLUS  24– 218– DEHYDROGENASESUBTILIS 51 246 P6PGD_ECOLI 6-PHOSPHOGLUCONATE ESCHERICHIA 205–DEHYDROGENASE COLI 232 P6PGD_SALTY 6-PHOSPHOGLUCONATE SALMONELLA 205–DEHYDROGENASE TYPHIMURIUM 232 PAACA_STAAU 6′-AMINOGLYCOSIDESTAPHYLOCOCCUS 450– N-ACETYLTRANSFERASE AUREUS 477 PAAT_BACSP ASPARTATEBACILLUS SP 146– 185– AMINOTRANSFERASE 173 212 PAAT_ECOLI ASPARTATEESCHERICHIA 351– AMINOTRANSFERASE COLI 378 PABC_ECOLI ABC PROTEINESCHERICHIA 176– COLI 203 PAB1C_LACLA ABORTIVE PHAGE LACTOCOCCUS  85–170– 209– RESISTANCE PROTEIN ABIC LACTIS 126 204 273 PACCR_AGRTUTRANSCRIPTIONAL AGROBACTERIUM 127– REPRESSOR ACCR TUMEFACIENS 154PACEA_ECOLI ISOCITRATE LYASE ESCHERICHIA 398– COLI 432 PACON_BACSUACONITATE HYDRATASE BACILLUS  48– SUBTILIS 75 PACON_ECOLI ACONITATEHYDRATASE ESCHERICHIA  41– 613– COLI 68 640 PACOR_ALCEU ACETOINCATABOLISM ALCALIGENES  85– REG PRO EUTROPHUS 112 PACP_ECOLI ACYLCARRIER PROTEIN ESCHERICHIA  4– COLI 31 PACRA_ECOLI ACRIFLAVINRESISTANCE ESCHERICHIA 213– PROTEIN A PRECURSOR COLI 247 PACRB_ECOLIACRIFLAVIN RESISTANCE ESCHERICHIA 520– PROTEIN B COLI 551 PACRF_ECOLIACRIFLAVIN RESISTANCE ESCHERICHIA 512– 726– PROTEIN F COLI 550 753PACT3_STRCO PUTATIVE KETOACYL STREPTOMYCES 157– REDUCTASE COELICOLOR 184PACTA_LISMO ACTIN-ASSEMBLY INDUCING LISTERIA 237– 576– PROTEIN PRECURSORMONOCYTOGENES 264 603 PACVS_NOCLA ACV SYNTHETASE NOCARDIA 3129– LACTAMDURANS 3163 PADAA_BACSU METPHOSTRIESTER-DNA BACILUS 136–ALKYLTRANSFERASE SUBTILIS 170 PADDA_BACSU ATP-DEPENDENT NUCLEASEBACILLUS 398– 454– 522– 1005–  SUBUNIT A SUBTILIS 425 481 556 1032PADDB_BACSU ATP-DEPENDENT NUCLEASE BACILLUS 257– 870– 943– SUBUNIT BSUBTILIS 284 903 977 PADH1_CLOAB NADPH-DEPENDENT BUTANOL CLOSTRIDIUM284– DEHYDROGENASE ACETOBUTYLICUM 311 PADHA_CLOAB NADH-DEPENDENT BUTANOLCLOSTRIDIUM 298– DEHYDROGENASE A ACETOBUTYLICUM 325 PADHB_CLOABNADH-DEPENDENT BUTANOL CLOSTRIDIUM 298– DEHYDROGENASE B ACETOBUTYLICUM325 PADHE_CLOAB ALCOHOL DEHYDROGENASE CLOSTRIDIUM 653– 779–ACETOBUTYLICUM 680 806 PADHE_ECOLI ALCOHOL DEHYDROGENASE ESCHERICHIA271– COLI 298 PADIY_ECOLI PUTATIVE REGULATORY ESCHERICHIA  45– PROTEINADIY COLI 72 PADPI_MYCGE 140 KD ADHESIN MYCOPLASMA  90– 697– 923– 990–1169–  1387–  PRECURSOR GENITALIUM 131 724 950 1017 1199 1414PADP1_MYCPN ADHESIN P1 PRECURSOR MYCOPLASMA 1557–  PNEUMONIAE 1584PADT_RICPR ADP ATP CARRIER PROTEIN RICKETTSIA 276– PROWAZEKII 307PAERA_AERHY AEROLYSIN PRECURSOR AEROMONAS 278– HYDROPHILA 305PAGAL_STRMU ALPHA-GALACTOSIDASE STREPTOCOCCUS 419– 597– MUTANS 483 633PAGAR_PSEAT BETA-AGARASE PRECURSOR PSEUDOMONAS  26– ATLANTICA 53PAGR_STAAU ACCESSORY GENE STAPHYLOCOCCUS 129– 165– REGULATOR AUREUS 159192 PROTEIN PAIL_YEREN ATTACH INVAS LOCUS YERSINIA  19– PROTEINENTEROCOLITICA 46 PRECURSOR PAK1H_ECOLI ASPARTOKINASE 1 ESCHERICHI  3–466– 503– COLI 30 493 530 PAK2H_ECOLI ASPARTOKINASE II ESCHERICHIA  51–608– COLI 78 635 PAK2_BACSU ASPARTATE KINASE II BACILLUS 266– ALPHA ANDBETA SUBTILIS 312 SUBUNITS PAKAB_CORGL ASPARTATE KINASE ALPHACORYNEBACTERIUM  5– AND BETA SUBUNITS GLUTMICUM 32 PALF_ECOLIFRUCTOSE-BISPHOSPHATE ESCHERICHIA 286– ALDOLASE COLI 316 PALGB_PSEAEALGINATE BIOSYN TRANSL PSEUDOMONAS 160– REG PROTEIN ALGB AERUGINOSA 194PALGE_PSEAE ALGINATE PRODUCTION PSEUDOMONAS 349– PROTEIN ALGE PRECURSOAERUGINOSA 376 PALGP_PSEAE TRANSCRIPTIONAL PSEUDOMONAS  81– REGULATORYAERUGINOSA 115 PROTEIN ALGP PALKB_PSEOL ALKANE-1 MONOOXYGENASEPSEUDOMONAS 115– OLEOVORANS 142 PALKT_PSEOL RUBREDOXIN-NAD(+)PSEUDOMONAS 138– 338– REDUCTASE OLEOVORANS 172 365 PALR2_ECOLI ALANTNERACEMASE, ESCHERICHIA  9– CATABOLIC COLI 36 PRECURSOR PALR_BACST ALANINERACEMASE BACILLUS 326– STEAROTHERMORPHILUS 353 PALSR_BACSU ALS OPERONREGULATORY BACILLUS 119– PROTEIN SUBTILIS 146 PALYS_BACSP AUTOLYSINPRECURSOR BACILLUS SP 157– 187 PALYS_BACSU AUTOLYSIN PRECURSOR BACILLUS147– SUBTILIS 191 PALYS_STAAU AUTOLYSIN STAPHYLOCOCCUS 244– AUREUS 271PAM1A_STRPN AMIA PROTEIN PRECURSOR STREPTOCOCCUS 223– 297– 446–PNEUMONIAE 264 338 473 PAMID_PSECL AMIDASE PSEUDOMONAS  72– CHLORORAPHIS99 PAM1E_STRPN OLIGOPEPT1DE TRANSPORT TREPTOCOCCUS 187– PROTEIN AMIEPNEUMONIAE 214 PAMPA_ECOLI AMINOPEPTIDASE A/I ESCHERICHIA 111– 199– COLI138 226 PAMPC_SERMA BETA-LACTAMASE SERRATIA 231– PRECURSOR MARCESCENS258 PAMPL_RICPR CYTOSOL AMINOPEPTIDASE RICKETTSIA  3–  72– PROWAZEKII 4799 PAMPN_ECOLI AMINOPEPTIDASE N ESCHERICHIA  655–   COLI 682 PAMPP_ECOLIX-PRO AMINOPEPTIDASE ESCHERICHIA 110– COLI 137 PAMPT_THEAQAMINOPEPTIDASE T THERMUS 281– AQUATICUS 308 PAMY1_DICTH ALPHA-AMYLASE 1DICTYOGLOMUS 507– THERMOPHILUM 534 PAMY2_DICTH ALPHA-AMYLASE 2DICTYOGLOMUS 151– 507– THERMOPHILUM 178 534 PAMY2_SALTY CYTOPLASMICSALMONELLA  70– ALPHA-AMYLASE TYPHIMURIUM 104 PAMY3_DICTH ALPHA-AMYLASE3 DICTYOGLOMUS 280– THERMOPHILUM 307 PAMYB_BACCI BETA-AMYLASE PRECURSORBACILLUS  61– CIRCULANS 88 PAMYB_BACPO BETA-AMYLASE BACILLUS  60– 266–1143–  POLYMYXA 87 293 1184 PAMYB_CLOTU BETA-AMYLASE, CLOSTRIDIUM 269–378– 459– THERMOPHILIC THERMOSULFUROGENES 296 405 486 PRECURSORPAMYG_CLOSP GLUCOAMYLASE PRECURSOR CLOSTRIDIUM SP 103– 480– 148 510PAMYM_BACST MALTOGENIC BACILLUS 426– ALPHA-AMYLASE STEAROTHERMOPHILUS453 PRECURSOR PAMYR_BACS8 RAW-STARCH-DIGESTING BACILLUS SP 210– 435–615– AMYLASE 237 465 642 PAMY_AERHY ALPHA-AMYLASE PRECURSOR AEROMONAS415– HYDROPHILA 453 PAMY_ALTHA ALPHA-AMYLASE PRECURSOR ALTEROMONAS 166–HALOPLANKTIS 193 PAMY_BACAM ALPHA-AMYLASE PRECURSOR BACILLUS 102–AMYLOLIQUEFACIENS 136 PAMY_BACCI ALPHA-AMYLASE PRECURSOR BACILLUS 212–437– CIRCULANS 239 474 PAMY_BACME ALPHA-AMYLASE PRECURSOR BACILLUS  61–441– MEGATERIUM 88 482 PAMY_BACSU ALPHA-AMYLASE PRECURSOR BACILLUS 165–281– SUBTILIS 205 308 PAMY_BUTFI ALPHA-AMYLASE PRECURSOR BUTYRIVIBRIO377– 546– 579– 795– FIBRISOLVENS 418 573 606 822 PAMY_CLOAB PUTATIVEALPHA-AMYLASE CLOSTRIDIUM 283– ACETOBUTYLICUM 310 PAMY_CLOTUALPHA-AMYLASE PRECURSOR CLOSTRIDIUM 431– 612– THERMOSULFUROGENES 468 642PAMY_STRLM ALPHA-AMYLASE PRECURSOR STREPTOMYCES 173– LIMOSUS 200PANFA_AZOV1 NITROGEN FIXATION AZOTOBACTER 232– PROTEIN ANFA VINELANDII259 PANFD_AZOV1 NITROGENASE IRON-IRON AZOTOBACTER  95– PROTEIN ALPHACHAIN VINELANDII 122 PANFK_AZOV1 NITROGENASE IRON-IRON AZOTOBACTER 369–PROTEIN BETA CHAIN VINELANDII 396 PANGR_VIBAN ANGR PROTEIN VIBRIO  93–169– ANGUILLARUM 120 203 PAPCE_FRED1 PHYCOBILISOME 120 KD FREMYELLA  51–LINKER POLYPEPTIDE DIPLOSIPHON 78 PAPCE_SYNP6 PHYCOBILISOME LINKERSYNECHOCOCCUS SP  37– 585– POLYPEPTIDE 64 615 PAPCE_SYNY4 PHYCOBILISOME120 KD SYNECHOCYSTIS SP  52– LINKER POLYPEPTIDE 79 PAPHC_SALTY ALKYLHYDROPEROXIDE SALMONELLA  62– REDUCTASE C22 PROTEIN TYPHIMURIUM 89PAPI_ACHLY PROTEASE 1 PRECURSOR ACHROMOBACTER 478– LYTICUS 505PAPPC_ECOLI PROBABLE CYTOCHROME ESCHERICHIA 118– OXIDASE SUBUNIT 1 COLI148 PAPRD_PSEAE ALKALINE PROTEASE PSEUDOMONAS 416– SECRETION AERUGINOSA450 PROTEIN APRD PAPRE_PSEAE ALKALINE PROTEASE PSEUDOMONAS 133– 208–247– SECRETION AERUGINOSA 193 235 277 PROTEIN APRE PAPT_ECOLI ADENTNEESCHERICHIA 121– PHOSPHORIBOSYL- COLI 148 TRANSFERASE PAPU_THEETALPHA-AMYLASE- THERMOANAEROBACTER 276– 347– 936– 987– 1210–  1381– PULLULANASE ETHANOLICUS 303 374 982 1014 1254 I405 PRECURSOR PARCA_MYCARARGINTNE DEIMINASE MYCOPLASMA  60– 218– ARGININI 87 245 PARCB_ECOLIAEROBIC RESPIRATION ESCHERICHIA 102– 302– 399– CONTROL PROTEIN ARCB COLI150 329 426 PARCD_PSEAE PROBABLE ARGINTNE/ PSEUDOMONAS 274– 386–ORNITHINE AERUGINOSA 301 420 ANTIPORTER PARGA_ECOLI AMINO-ACIDESCHERICHIA  82– ACETYLTRANSFERASE COLI 109 PARGT_ECOLILYS-ARG-ORN-BINDING ESCHERICHIA  84– PROTEIN COLI 111 (LAO) PRECURSOPAROA_STAAU PHOSPHOSHIKIMATE 1- STAPHYLOCOCCUS  86– CARBOXYVINYLTRANSFER AUREUS 120 PAROC_ECOLI CHORISMATE SYNTHASE ESCHERICHIA  68–COLI 95 PAROC_SALT1 CHORISMATE SYNTHASE SALMONELLA  68– TYPHI 95PAROD_BACSU DEHYDROQUINATE BACILLUS  49– DEHYDRATASE SUBTILIS 76PAROK_ECOLI SHIKIMATE KINASE I ESCHERICHIA  84– COLI 118 PARP4_STRPY IGARECEPTOR PRECURSOR STREPTOCOCCUS  12– 127– 266– PYOGENES 46 157 324PARP_ECOLI ARP PROTEIN ESCHERICHIA 255– COLI 282 PARSA_ECOLI ARSENICALPUMP-DRIVING ESCHERICHIA 201– ATPASE COLI 238 PARSB_ECOLI ARSENICAL PUMPMEMBRANE ESCHERICHIA 291– PROTEIN COLI 318 PARSB_STAAU ARSENICAL PUMPMEMBRANE STAPHYLOCOCCUS  27– 295– PROTEIN AUREUS 71 322 PARSB_STAXYARSENICAL PUMP MEMBRANE STAPHYLOCOCCUS  27– 295– PROTEIN XYLOSUS 71 322PARSR_STAAU ARSENICAL RESIST OPERON STAPHYLOCOCCUS  56– REPRESSORPROTEIN AUREUS 93 PARTA_ECOLI ARTA PROTEIN ESCHERICHIA  3– COLI 30PARTI_ECOLI TRANSPORT SYSTEM ESCHERICHIA 105– 213– PROTEIN ARTI COLI 132240 PARTP_ECOLI TRANSPORT SYSTEM ESCHERICHIA 176– PROTEIN ARTP COLI 206PASAI_ENTFA AGGREGATION SUBSTANCE ENTEROCOCCUS 195– 478– 799– 859–PRECURSOR FAECALIS 254 505 826 896 PASNA_ECOLI ASPARTATE-AMMONIAESCHERICHIA 127– LIGASE COLI 158 PASNB_ECOLI ASPARAGINE SYNTHETASE BESCHERICHIA 150– COLI 477 PASNC_ECOLI REGULATORY PROTEIN ASNCESCHERICHIA 116– COLI 143 PASPA_BACSU ASPARTATE AMMONIA-LYASE BACILLUS 7– SUBTILIS 34 PASPA_ECOLI ASPARTATE AMMONIA-LYASE ESCHERICHIA 204–COLI 236 PASPA_SERMA ASPARTATE AMMONIA-LYASE SERRATIA 204– MARCESCENS231 PASPG_BACLI L-ASPARAGINASE BACILLUS 252– LICHENIFORMIS 288PASPG_ERWCH L-ASPARAGINASE ERWINIA 188– PRECURSOR CHRYSANTHEMI 218PASPQ_ACIGL GLUTAMINASE- ACINETOBACTER  46– ASPARAGINASEGLUTAMINASIFIANS 80 PASSY_ECOLI ARGININOSUCCINATE ESCHERICHIA 354–SYNTHASE COLI 381 PASSY_METBA ARGININOSUCCINATE METHANOSARCINA 287–SYNTHASE BARKERI 314 PATBP_STAAU POTENTIAL ATP-BINDING STAPHYLOCOCCUS 41– 201– PROTEIN AUREUS 68 245 PATKA_ENTFA POTASSIUM/COPPER-ENTEROCOCCUS  41– 347– TRANSPORTING ATPASE A FAECALIS 80 374 PATKB_ENTFAPOTASSIUM/COPPER- ENTEROCOCCUS 280– 450– TRANSPORTING ATPASE B FAECALIS310 477 PATMB_SALTY MG(2+) TRANSPORT SALMONELLA 503– ATPASE, P-TYPETYPHIMURIUM 530 PATP6_SYNP6 ATP SYNTHASE A CHAIN SYNECHOCOCCUS SP 233–260 PATP6_VIBAL ATP SYNTHASE A CHAIN VIBRIO  11– ALGINOLYTICUS 38PATPA_ANASP ATP SYNTHASE ALPHA ANABAENA SP  9–  96– CHAIN 36 130PATPA_BACME ATP SYNTHASE ALPHA BACILLUS  4– 451– CHAIN MEGATERIUM 36 480PATPA_ECOLI ATP SYNTHASE ALPHA ESCHERICHIA 486– CHAIN COLI 513PATPA_ENTFA ATP SYNTHASE ALPHA ENTEROCOCCUS  4– 484– CHAIN FAECALIS 36518 PATPA_MYCGA ATP SYNTHASE ALPHA MYCOPLASMA 362– CHAIN GALLISEPTICUM409 PATPA_PROMO ATP SYNTHASE ALPHA PROPIONIGENIUM  6– CHAIN MODESTUM 36PATPA_RHORU ATP SYNTHASE ALPHA RHODOSPIRILLUM 165– 459– CHAIN RUBRUM 200486 PATPA_SULAC ATPASE ALPHA CHAIN SULFOLOBUS 318– 562– ACIDOCALDARIUS345 589 PATPA_SYNP1 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP  7– CHAIN 44PATPA_SYNP6 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP  8– 362– CHAIN 45 389PATPA_SYNY3 ATP SYNTHASE ALPHA SYNECHOCYSTIS SP  8– 454– CHAIN 37 500PATPA_THEP3 ATP SYNTHASE ALPHA THERMOPHILIC  9– CHAIN BACTERIUMPS-3 36PATPA_VIBAL ATP SYNTHASE ALPHA VIBRIO 464– CHAIN ALGINOLYTICUS 513PATPB_ANASP ATP SYNTHASE BETA ANABAENA SP 280– 370– CHAIN 307 397PATPB_BACFI ATP SYNTHASE BETA BACILLUS 163– 358– CHAIN FIRMUS 190 385PATPB_MYCGA ATP SYNTHASE BETA MYCOPLASMA 375– CHAIN GALLISEPTICUM 402PATPB_RHORU ATP SYNTHASE BETA RHODOSPIRILLUM 359– CHAIN RUBRUM 386PATPB_SULAC ATPASE BETA CHAIN SULFOLOBUS 164– ACIDOCALDARIUS 191PATPB_SYNP1 ATP SYNTHASE BETA SYNECHOCOCCUS SP 381– CHAIN 408PATPB_SYNP6 ATP SYNTHASE BETA SYNECHOCOCCUS SP 291– 381– CHAIN 318 408PATPB_SYNY3 ATP SYNTHASE BETA SYNECHOCYSTIS SP 381– CHAIN 408PATPD_ANASP ATP SYNTHASE DELTA CHAIN ANABAENA SP 109– 143– 139 170PATPD_BACFI ATP SYNTHASE DELTA BACILLUS  63– 133– CHAIN FIRMUS 90 160PATPD_BACME ATP SYNTHASE DELTA BACILLUS 132– CHAIN MEGATERIUM 159PATPD_ENTFA ATP SYNTHASE DELTA ENTEROCOCCUS  14– CHAIN FAECALIS 41PATPD_PROMO ATP SYNTHASE DELTA PROPIONIGENIUM  79– 118– CHAIN MODESTUM116 149 PATPD_RHOBL ATP SYNTHASE DELTA RHODOPSEUDOMONAS 125– CHAINBLASTICA 152 PATPD_RHORU ATP SYNTHASE DELTA RHODOSPIRILLUM 119– CHAINRUBRUM 146 PATPD_SYNP1 ATP SYNTHASE DELTA SYNECHOCOCCUS SP 100– CHAIN127 PATPD_SYNY3 ATP SYNTHASE DELTA SYNECHOCYSTIS SP 113– CHAIN 147PATPD_VIBAL ATP SYNTHASE DELTA VIBRIO 110– CHAIN ALGINOLYTICUS 137PATPE_BACFI ATP SYNTHASE EPSILON BACILLUS  53– CHAIN FIRMUS 80PATPE_MYCGA ATP SYNTHASE EPSILON MYCOPLASMA  99– CHAIN GALLISEPTICUM 126PATPE_PROMO ATP SYNTHASE EPSILON PROPIONIGENIUM 100– CHAIN MODESTUM 127PATPE_SYNP1 ATP SYNTHASE EPSILON SYNECHOCOCCUS SP  72– CHAIN 106PATPF_ANASP ATP SYNTHASE B CHAIN ANABAENA SP  17–  51– 137– 44 78 164PATPF_BACFI ATP SYNTHASE B CHAIN BACILLUS 110– FIRMUS 151 PATPF_BACMEATP SYNTHASE B CHAIN BACILLUS  55– 122– MEGATERIUM 85 170 PATPF_MYCGAATP SYNTHASE B CHAIN MYCOPLASMA  82– 170– GALLISEPTICUM 135 197PATPF_SYNP1 ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP  15– 111– 49 159PATPF_SYNP6 ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP  12– 128– 39 155PATPF_THEP3 ATP SYNTHASE B CHAIN THERMOPHILIC  50– PRECURSOR BACTERIUMPS-3 77 PATPG_ANASP ATP SYNTHASE GAMMA ANABAENA SP 276– CHAIN 310PATPG_ECOLI ATP SYNTHASE GAMMA ESCHERICHIA 253– CHAIN COLI 283PATPG_MYCGA ATP SYNTHASE GAMMA MYCOPLASMA  28–  92– CHAIN GALLISEPTICUM62 140 PATPG_RHORU ATP SYNTHASE GAMMA RHODOSPIRILLUM 270– CHAIN RUBRUM297 PATPG_SYNP1 ATP SYNTHASE GAMMA SYNECHOCOCCUS SP 280– CHAIN 307PATPG_SYNY3 ATP SYNTHASE GAMMA SYNECHOCYSTIS SP  96– 280– CHAIN 126 307PATP1_MYCGA ATP SYNTHASE PROTEIN I MYCOPLASMA 133– GALLISEPTICUM 167PATPX_ANASP ATP SYNTHASE B′ ANABAENA SP 129– CHAIN 156 PATPX_BACFI ATPSYNTHASE BETA BACILLUS 162– 356– CHAIN FIRMUS 189 383 PATPX_RHORU ATPSYNTHASE B′ RHODOSPIRILLUM  40– CHAIN RUBRUM 74 PATPX_SYNP1 ATP SYNTHASEB′ SYNECHOCOCCUS SP  57– 128– CHAIN 110 155 PATPX_SYNP6 ATP SYNTHASE B′SYNECHOCOCCUS SP  70– CHAIN 100 PATPX_SYNY3 ATP SYNTHASE B′SYNECHOCYSTIS SP 108– CHAIN 135 PATPZ_BACME ATP SYNTHASE PROTEIN IBACILLUS  14– MEGATERIUM 62 PATPZ_SYNP1 ATP SYNTHASE PROTEIN ISYNECHOCOCCUS SP  90– 131 PAVRB_PSESG AVIRULENCE B PROTEIN PSEUDOMONAS184– 233– SYRINGAE 211 260 PBA71_EUBSP 7-ALPHA-HYDROXYSTEROIDEUBACTERIUM SP  26– DEHYDROGENASE 53 PBA72_EUBSP 7-ALPHA-HYDROXYSTEROIDEUBACTERIUM SP  26– DEHYDROGENASE 53 PBACH_HALHM HALORHODOPSINHALOBACTERIUM 145– HALOBIUM 179 PBACH_HALSG HALORHODOPSIN PRECURSORHALOBACTERIUM SP 180– 214 PBAES_ECOLI SENSOR PROTEIN BAES ESCHERICHIA152– COLI 186 PBAG_STRAG IGA FC RECEPTOR STREPTOCOCCUS  92– 138– 267–343– 487– 562– 1014–  PRECURSOR AGALACTIAE 119 204 306 385 524 589 1041PBAHG_VITSP BACTERIAL HEMOGLOBIN VITREOSCILLA SP 119– 146 PBAIC_EUBSPBILE ACID-INDUCIBLE EUBACTERIUM SP 423– OPERON PROTEIN C 450 PBARA_ECOLISENSOR PROTEIN BARA ESCHERICHIA 334– 425– COLI 361 455 PBASS_ECOLISENSOR PROTEIN BASS ESCHERICHIA 122– COLI 156 PBAT_HALHA PUTATIVEBACTERIO- HALOBACTERIUM 408– OPSIN ACTIVATOR HALOBIUM 442 PBAX_ECOLI BAXPROTEIN ESCHERICHIA  21– COLI 64 PBCCP_ECOLI BIOTIN CARBOXYL CARRIERESCHERICHIA  6– PROTEIN COLI 35 PBCHH_RHOCA METHYLTRANSFERASERHODOBACTER 1000–  CAPSULATUS 1032 PBCHN_RHOCA PROTOCHLOROPHYLLIDERHODOBACTER 249– REDUCTASE 46 KD CHAIN CAPSULATUS 276 PBCN5_CLOPEBACTERIOCIN BCN5 CLOSTRIDIUM  72– 585– PERFRINGENS 99 646 PBCPA_PROAEBACTERIOCHLOROPHYLL A PROSTHECOCHLORIS  63– PROTEIN AESTUARII 93PBCSC_ACEXY CELLULOSE SYNTHASE ACETOBACTER 131– 1055–    OPERON CPROTEIN XYLINUM 158 1082 PBCSD_ACEXY CELLULOSE SYNTHASE ACETOBACTER  10–OPERON D PROTEIN XYLINUM 37 PBENA_ACICA BENZOATE 1,2- ACINETOBACTER 190–DIOXYGENASE CALCOACETICUS 217 ALPHA SUBUNIT PBETT_ECOLI HIGH AFFINITYCHOLINE ESCHERICHIA 243– TRANSPORT PROTEIN COLI 270 PBEXA_HAEIN BEXAPROTEIN HAEMOPHILUS  23– INFLUENZAE 50 PBEXC_HAEIN BEXC PROTEINHAEMOPHILUS 157– 226– INFLUENZAE 184 253 PBEXD_HAEIN BEXD PROTEINHAEMOPHILUS 205– INFLUENZAE 239 PBFR_NITW1 BACTERIOFERRITIN NITROBACTER 8– WINOGRADSKYI 35 PBGA2_ECOLI EVOLVED BETA- ESCHERICHIA 955–GALACTOSIDASE COLI 985 ALPHA-SUBUNIT PBGAL_BACST BETA-GALACTOSIDASEBACILLUS 599– STEAROTHERMOPHILUS 633 PBGAL_CLOAB BETA-GALACTOSIDASECLOSTRIDIUM 824– ACETOBUTYLICUM 851 PBGAL_CLOTU BETA-GALACTOSIDASECLOSTRIDIUM 161– THERMOSULFUROGENES 191 PBGAL_KLEPN BETA-GALACTOSIDASEKLEBSIELLA 245– PNEUMONIAE 372 PBGAL_LACDE BETA-GALACTOSIDASELACTOBACILLUS 305– DELBRUECKII 332 PBGAL_STRTR BETA-GALACTOSIDASESTREPTOCOCCUS 188– THERMOPHILUS 215 PBGAL_SULSO BETA-GALACTOSIDASESULFOLOBUS  59– 179– SOLFATARICUS 86 206 PBGAM_LEULA BETA-GALACTOSIDASELEUCONOSTOC 129– SMALL SUBUNIT LACTIS 156 PBGAM_SULSO BETA-GALACTOSIDASESULFOLOBUS 106– SOLFATARICUS 140 PBGLA_CLOTM BETA-GLUCOSIDASE ACLOSTRIDIUM 353– 418– THERMOCELLUM 380 415 PBGLB_CLOTM THERMOSTABLEBETA- CLOSTRIDIUM 259– 375– 554– 631– GLUCOSIDASE B THERMOCELLUM 286 409581 665 PBGLR_ECOLI BETA-GLUCURONIDASE ESCHERICHIA 464– 536– COLI 494563 PBGLS_AGRSP BETA-GLUCOSIDASE AGROBACTERIUM SP 421– 448 PBGLS_BUTFIBETA-GLUCOSIDASE A BUTYRIVIBRIO  85– 435– 692– 738– FIBRISOLVENS 112 462719 765 PBIN3_STAAU POTENTIAL DNA-INVERTASE STAPHYLOCOCCUS  60– BIN3AUREUS 87 PBINL_STAAU TRANSPOSON TN552 STAPHYLOCOCCUS 163– RESOLVASEAUREUS 197 PBINR_STAAU DNA-INVERTASE BINR STAPHYLOCOCCUS 163– AUREUS 190PBIOA_BACSH AMINOTRANSFERASE BACILLUS  33– SPHAERICUS 60 PBIOB_BACSHBIOTIN SYNTHETASE BACILLUS 145– SPHAERICUS 172 PBIOB_ECOLI BIOTINSYNTHETASE ESCHERICHIA 130– COLI 157 PBIOD_BACSH DETHIOBIOTIN SYNTHASEBACILLUS 144– SPHAERICUS 171 PBLA1_BACCE BETA-LACTAMASE BACILLUS  91–275– PRECURSOR, TYPE 1 CEREUS 118 305 PBLA1_HAEIN BETA-LACTAMASE ROB-1HAEMOPHILUS 152– 204– PRECURSOR INFLUENZAE 179 231 PBLA2_BACCEBETA-LACTAMASE BACILLUS  18– 201– PRECURSOR, TYPE II CEREUS 67 228PBLA2_BACSP BETA-LACTAMASE BACILLUS SP  18– PRECURSOR, TYPE II 67PBLA3_BACCE BETA-LACTAMASE BACILLUS  35–  95– PRECURSOR, TYPE III CEREUS83 129 PBLA4_PSEAE BETA-LACTAMASE PSEUDOMONAS  19– PSE-4 PRECURSORAERUGINOSA 50 PBLAB_BACCE BETA-LACTAMASE BACILLUS  20– 200– PRECURSOR,TYPE II CEREUS 66 227 PBLAB_BACFR BETA-LACTAMASE BACTEROIDES  22–PRECURSOR, TYPE II FRAGILIS 49 PBLAC_BACCE BETA-LACTAMASE BACILLUS  93–276– PRECURSOR, TYPE I CEREUS 120 303 PBLAC_BACLI BETA-LACTAMASEBACILLUS  47–  86– PRECURSOR LICHENIFORMIS 74 115 PBLAC_PROMIBETA-LACTAMASE PROTEUS 191– PRECURSOR MIRABILIS 221 PBLAC_PROVUBETA-LACTAMASE PROTEUS  4– 240– VULGARIS 38 267 PBLAC_STRALBETA-LACTAMASE STREPTOMYCES  43– PRECURSOR ALBUS G 70 PBLAD_KLEPNBETA-LACTAMASE KLEBSIELLA 121– PRECURSOR PNEUMONIAE 148 PBLAI_STAAUPENICILLINASE STAPHYLOCOCCUS  19–  99– REPRESSOR AUREUS 74 126PBLAO_ECOLI BETA-LACTAMASE ESCHERICHIA 118– 235– PRECURSOR COLI 166 262PBLAP_ECOLI BETA-LACTAMASE PSE-2 ESCHERICHIA 155– PRECURSOR COLI 196PBLAR_BACLI REGULATORY PROTEIN BACILLUS 129– 515– BLAR1 LICHENIFORMIS156 552 PBLAR_STAAU REGULATORY PROTEIN STAPHYLOCOCCUS  87– 122– 234–281– 503– BLAR1 AUREUS 114 161 261 312 539 PBMP_TREPA BASIC MEMBRANETREPONEMA 312– PROTEIN PRECURSOR PALLIDUM 346 PBMR_BACSU MULTIDRUGRESISTANCE BACILLUS 277– PROTEIN SUBTILIS 304 PBNZA_PSEPU BENZENE 1,2-PSEUDOMONAS  36– DIOXYGENASE PUTIDA 63 ALPHA SUBUNIT PBNZB_PSEPU BENZENE1,2- PSEUDOMONAS 119– DIOXYGENASE PUTIDA 153 BETA SUBUNIT PBNZD_PSEPU P4SUBUNIT PSEUDOMONAS 179– PUTIDA 213 PBPS2_DESAM BPS2 PROTEINDESULFUROLOBUS 157– 242– 311– 391– 543– AMBIVALENS 237 290 355 425 573PBRAB_PSEAE CARRIER PROTEIN PSEUDOMONAS 260– 313– AERUGINOSA 287 340PBRAE_PSEAE TRANSPORT PROTEIN BRAE PSEUDOMONAS 254– AERUGINOSA 281PBRAG_PSEAE BRAG PROTEIN PSEUDOMONAS  7– AERUGINOSA 34 PBTUB_ECOLIVITAMIN B12 RECEPTOR ESCHERICHIA 439– PRECURSOR COLI 466 PBTUE_ECOLIVITAMIN B12 TRANSPORT ESCHERICHIA  6– PERIPLASMIC PROTEIN COLI 33PBVGA_BORPE TRANSCRIPTION REGULATOR BORDETELLA 174– BVGA PERTUSSIS 205BORDETELLA BRONCHISEPTICA PBVGB_BORPE PERIPLASMIC PROTEIN BORDETELLA116– BVGB PRECURSOR PERTUSSIS 143 PBVGC_BORPE SENSOR PROTEIN BVGCBORDETELLA  39– 202– PERTUSSIS 66 229 PBVGS_BORBR VIRULENCE BVGSBORDETELLA 113– 341– 501– PROTEIN PRECURSOR BRONCHISEPTICA 143 368 531PBXA_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM 313– 686– 733– 815– 851–968– 1159–  TYPE A PRECURSOR BOTULINUM 340 729 762 842 893 995 1207PBXB_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM 666– 720– 802– 853– 1004– 1058–  TYPE B PRECURSOR BOTULINUM 693 762 832 890 1031 1089 PBXC1_CLOBOBOTULINUM NEUROTOXIN CLOSTRIDIUM  86– 314– 730– 798– 850– TYPE C1PRECURSOR BOTULINUM 113 341 773 825 892 PBXD_CLOBO BOTULINUM NEUROTOXINCLOSTRIDIUM 473– 526– 727– 804– 847– 906– 1060–  TYPE D PRECURSORBOTULINUM 500 576 770 831 892 963 1087 PBXE_CLOBO BOTULINUM NEUROTOXINCLOSTRIDIUM 254– 350– 704– 773– 890– 992– 111S–   TYPE E PRECURSORBOTULINUM 291 381 753 811 917 1019 1149 PBXE_CLOBU BOTULINUM NEUROTOXINCLOSTRIDIUM 254– 350– 704– 774– 890– 992– 1115–  TYPE E PRECURSORBUTYRICUM 291 381 753 808 917 1019 1149 PBXF_CLOBO BOTULINUM NEUROTOXINCLOSTRIDIUM 669– 735– 892– 1013–  1095–  1153–  TYPE F PRECURSORBOTULINUM 710 772 919 1040 1122 1210 PC550_MICAE CYTOCHROME C550MICROCYSTIS  3– AERUGINOSA 30 PCADA_BACF1 PROBABLE CADMIUM- BACILLUS 30– 100– 165– 276– 533– TRANSPORTING ATPASE FIRMUS 57 131 192 306 567PCADA_STAAU PROBABLE CADMIUM- STAPHYLOCOCCUS 282– 536– TRANSPORTINGATPASE AUREUS 309 570 PCADC_ECOLI TRANSCRIPTIONAL ESCHERICHIA  54– 412–ACTIVATOR COLI 85 443 CADC PCAFA_YERPE F1 CAPSULE ANCHORING YERSINIA203– 416–  530– 619– PROTEIN PRECURSOR PESTIS 240 457 557 646PCAPA_BACAN CAPA PROTEIN BACILLUS 108– ANTHRACIS 138 PCAPB_BACAN CAPBPROTEIN BACILLUS  36– ANTHRACIS 70 PCAPP_ANAN1 PHOSPHOENOLPYRUVATEANACYSTIS 248– CARBOXYLASE NIDULANS 293 PCAPP_ANASP PHOSPHOENOLPYRUVATEANABAENA SP  98– 157– 687– CARBOXYLASE 125 184 728 PCAPP_CORGLPHOSPHOENOLPYRUVATE CORYNEBACTERIUM  15– CARBOXYLASE GLUTMICUM 42PCAPP_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA  35– CARBOXYLASE COLI 62PCARA_BACSU CARBAMOYL-PHOSPHATE BACILLUS 274– SYNTHASE SUBTILIS 319PCARB_BACSU CARBAMOYL-PHOSPHATE BACILLUS 790– SYNTHASE SUBTILIS 831PCARB_ECOLI CARBAMOYL-PHOSPHATE ESCHERICHIA 454– SYNTHASE LARGE CHAICOLI 481 PCAT2_STAAU CHLORAMPHENICOL STAPHYLOCOCCUS  7–  87–ACETYLTRANSFERASE AUREUS 34 114 PCAT3_STAAU CHLORAMPHENICOLSTAPHYLOCOCCUS  7–  87– ACETYLTRANSFERASE AUREUS 34 114 PCATA_ACICACATECHOL 1,2- ACINETOBACTER  31– DIOXYGENASE CALCOACETICUS 65PCATA_BACST PEROXIDASE/CATALASE BACILLUS 440– STEAROTHERMOPHILUS 470PCATA_ECOLI CATALASE HPI ESCHERICHIA 579– COLI 606 PCATA_MICLU CATALASEMICROCOCCUS 453– LUTEUS 480 PCATA_SALTY CATALASE HPI SALMONELLA 515–580– TYPHIMURIUM 542 607 PCATE_ECOLI CATALASE HPII ESCHERICHIA 175– COLI202 PCAT_CAMCO CHLORAMPHENICOL CAMPYLOBACTER  84– ACETYLTRANSFERASE COLI111 PCAT_CLOBU CHLORAMPHENICOL CLOSTRIDIUM  88– ACETYLTRANSFERASEBUTYRICUM 115 PCAT_ECOLI CHLORAMPHENICOL ESCHERICHIA  92–ACETYLTRANSFERASE COLI 119 PCAT_PROMI CHLORAMPHENICOL PROTEUS  92–ACETYLTRANSFERASE MIRABILIS 119 PCAT_STAIN CHLORAMPHENICOLSTAPHYLOCOCCUS  7–  87– ACETYLTRANSFERASE INTERMEDIUS 34 114 PCAT_STRAGCHLORAMPHENICOL STREPTOCOCCUS  7–  87– ACETYLTRANSFERASE AGALACTIAE 34114 PCBHE_COXBU CBHE PROTEIN COXIELLA 209– BURNETII 236 PCBPT_THEVUCARBOXYPEPTIDASE T THERMOACTINOMYCES  48– PRECURSOR VULGARIS 75PCCA_ECOLI TRNA ESCHERICHIA 376– NUCLEOTIDYLTRANSFERASE COLI 403PCCMK_SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP  29– CCMK 56PCCMM_SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP 212– 331– 445– CCMM256 372 486 PCDAS_THEET CYCLOMALTODEXTRINASE THERMOANAEROBACTER 305–ETHANOLICUS 332 PCDG1_BACMA CYCLOMALTODEXT BACILLUS 439– 616–GLUCANOTRANS MACERANS 466  643 PRECURSOR PCDG2_BACMA CYCLOMALTODEXTBACILLUS 210– 436– 615– GLUCANOTRANS MACERANS 251 466 642 PRECURSORPCDGT_BACC1 CYCLOMALTODEXT BACILLUS 217– 442– 594– GLUCANOTRANSCIRCULANS 244 472 651 PRECURSOR PCDGT_BACLI CYCLOMALTODEXT BACILLUS 217–442– 594– GLUCANOTRANS LICHENIFORMIS 244 472 647 PRECURSOR PCDGT_BACOHCYCLOMALTODEXT BACILLUS 430– GLUCANOTRANS OHBENSIS 471 PRECURSORPCDGT_BACSO CYCLOMALTODEXT BACILLUS SP 210– 435– 615– GLUCANOTRANS 237462 642 PRECURSOR PCDGT_BACS2 CYCLOMALTODEXT BACILLUS SP 409–GLUCANOTRANS 471 PRECURSOR PCDGT_BACS3 CYCLOMALTODEXT BACILLUS SP 210–435– 614– GLUCANOTRANS 237 462 641 PRECURSOR PCDGT_BACSP CYCLOMALTODEXTBACILLUS SP 210– 435– 615– GLUCANOTRANS 237 465 642 PRECURSORPCDGT_BACSS CYCLOMALTODEXT BACILLUS SP 217– 442– 594– GLUCANOTRANS 244472 651 PRECURSOR PCDGT_BACST CYCLOMALTODEXT BACILLUS 586– GLUCANOTRANSSTEAROTHERMOPHILUS 646 PRECURSOR PCDGT_KLEPN CYCLOMALTODEXT KLEBSIELLA212– GLUCANOTRANS PNEUMONIAE 239 PRECURSOR PCEA1_ECOLI COLICIN E1PROTEIN ESCHERICHIA  44– 285– COLI 71 326 PCEA1_SHISO COLICIN E1 PROTEINSHIGELLA  44– 284– 413– SONNEI 71 325 440 PCEA2_ECOLI COLICIN E2ESCHERICHIA  3)4– COLI 368 PCEA3_ECOLI COLICIN E3 ESCHERICHIA 334– COLI368 PCEA6_ECOLI COLICIN E6 ESCHERICHIA 334– COLI 368 PCEAB_ECOLI COLICINB ESCHERICHIA 283– COLI 341 PCEAD_ECOLI COLICIN D ESCHERICHIA 284– COLI311 PCEAM_ECOLI COLICIN M ESCHERICHIA 178– COLI 227 PCEAN_ECOLI COLICINN ESCHERICHIA 119– 173– COLI 146 200 PCEA_CITFR COLICIN A CITROBACTER228– FREUNDII 258 PCEFD_STRCL ISOPENICILLIN N STREPTOMYCES 370–EPIMERASE CLAVULIGERUS 397 PCE1A_ECOLI COLICIN IA PROTEIN ESCHERICHIA 68– 255– 378– 415– COLI 95 282 412 452 PCE1B_ECOLI COLICIN IB PROTEINESCHERICHIA  68– 255– 378– 415– COLI 95 282 412 452 PCELA_ACEXY UTPURIDYLYLTRANSFERASE ACETOBACTER  59– XYLINUM 89 PCELA_ECOLI PROTEIN CELAESCHERICHIA  76– COLI 103 PCFAA_ECOLI CFA/1 FIMBRIAL SUBUNIT ESCHERICHIA 27– A PRECURSOR COLI 58 PCFAC_ECOLI CFA/1 FIMBRIAL SUBUNIT ESCHERICHIA138– 388– 561– C PRECURSOR COLI 187 456 595 PCFAD_ECOLI CFA/1 FIMBRIALSUBUNIT ESCHERICHIA 133– D COLI 160 PCFAE_ECOLI CFA/1 FIMBRIAL SUBUNITESCHERICHIA 180– 244– E COLI 207 271 PCH10_ACYPS 10 KD CHAPERONINACYRTHOSIPHON  57– PISUM 95 SYMBIOTIC BACTERIU PCH10_BACSU 10 KDCHAPERONIN BACILLUS  66– SUBTILIS 93 PCH10_CHLTR 10 KD CHAPERONINCHLAMYDIA  64– TRACHOMATIS 91 PCH10_ECOLI 10 KD CHAPERONIN ESCHERICHIA 57– COLI 84 PCH10_HAEDU 10 KB CHAPERONIN HAEMOPHILUS  68– DUCREYI 95PCH10_LEGMI 10 KD CHAPERONIN LEGIONELLA  57– MICDADEI 84 PCH10_R1CTS 10KD CHAPERONIN RICKETTSIA  65– TSUTSUGAMUSHI 92 PCH10_THEP3 10 KDCHAPERONIN THERMOPHILIC  66– BACTERIUM PS-3 93 PCH60_ACYPS 60 KDCHAPERONIN ACYRTHOSIPHON 341– PISUM 382 SYMBIOTIC BACTERIU PCH60_AGRTU60 KD CHAPERONIN AGROBACTERIUM 117– 339– 425– TUMEFACIENS 163 370 466PCH60_AMOPS 60 KD CHAPERONIN AMOEBA 299– PROTEUS 333 SYMBIOTIC BACTERIUMPCH60_BACSU 60 KD CHAPERONIN BACILLUS 298– 337– SUBTILIS 332 364PCH60_BORBU 60 KD CHAPERONIN BORRELIA 125– 299– BURGDORFERI 163 368PCH60_BRUAB 60 KD CHAPERONIN BRUCELLA 117– 339– ABORTUS 144 366PCH60_CHLPN 60 KD CHAPERONIN CHLAMYDIA  4– PNEUMONIAE 31 PCH60_CHLTR 60KD CHAPERONIN CHLAMYDIA  4– TRACHOMATIS 31 PCH60_CHRVI 60 KD CHAPERONINCHROMATIUM 300– VINOSUM 327 PCH60_CLOAB 60 KD CHAPERONIN CLOSTRIDIUM238– 337– 455– ACETOBUTYLICUM 332 364 482 PCH60_CLOPE 60 KD CHAPERONINCLOSTRIDIUM 337– 417– PERFRINGENS 368 444 PCH60_COXBU 60 KD CHAPERONINCOXIELLA 300– 348– BURNETII 327 382 PCH60_HAEDU 60 KD CHAPERONINHAEMOPHILUS 339– 417– DUCREYI 366 444 PCH60_LEGMI 60 KD CHAPERONINLEGIONELLA 299– MICDADEI 333 PCH60_LEGPN 60 KD CHAPERONIN LEGIONELLA298– 452– PNEUMOPHILA 332 479 PCH60_MYCLE 60 KD CHAPERONIN MYCOBACTERIUM125– 236– 337– LEPRAE 152 263 364 PCH60_MYCTU 60 KD CHAPERONINMYCOBACTERIUM 125– 337– TUBERCULOSIS & 152 364 BOVIS PCH60_PSEAE 60 KDCHAPERONIN PSEUDOMONAS 339– AERUGINOSA 366 PCH60_RHILV 60 KD CHAPERONINRHIZOBIUM 117– 322– 425– LEGUMINOSARUM 163 370 466 PCH60_R1CTS 60 KDCHAPERONIN RICKETTSIA 103– 293– 360– TSUTSUGAMUSHI 130 336 394PCH60_SYNP7 60 KD CHAPERONIN SYNECHOCOCCUS SP 308– 337– 335 380PCH60_SYNY3 60 KD CHAPERONIN SYNECHOCYSTIS SP 338– 455– 365 489PCH60_THEP3 60 KD CHAPERONIN THERMORHILIC 337– BACTERIUM PS-3 364PCH6J_STRAL 60 KD CHAPERONIN STREPTOMYCES 116– 337– ALBUS G 148 364PCHB_VIBHA N,N′- VIBRIO  21– 772– DIACETYXCHITOBIASE HARVEYI 48 799PRECURSOR PCHEA_BACSU CHEMOTAXIS PROTEIN CHEA BACILLUS 373– 590–SUBTILIS 400 617 PCHEA_ECOLI CHEMOTAXIS PROTEIN CHEA ESCHERICHIA 256–COLI 286 PCHEA_SALTY CHEMOTAXIS PROTEIN CHEA SALMONELLA 162– TYPHIMURIUM197 PCHER_BACSU CHEMOTAXIS PROTEIN BACILLUS 124– METHYLTRANSFERASESUBTILIS 151 PCHEW_ECOLI PURINE-BINDING ESCHERICHIA  68– CHEMOTAXIS COLI115 PROTEIN PCHEW_SALTY PURINE-BINDING SALMONELLA  88– CHEMOTAXISTYPHIMURIUM 115 PROTEIN PCHEY_ECOLI CHEMOTAXIS PROTEIN CHEY ESCHERICHIA 22– COLI 49 PCHEY_SALTY CHEMOTAXIS PROTEIN CHEY SALMONELLA  22–TYPHIMURIUM 49 PCHI1_BACCI CHITINASE A1 PRECURSOR BACILLUS 491– 566–CIRCULANS 518 593 PCH1A_ALTSO CHITINASE A PRECURSOR ALTEROMONAS SP 345–372 PCHIA_SERMA CHITINASE A PRECURSOR SERRATIA 346– MARCESCENS 373PCH1D_BACCI CHITINASE D PRECURSOR BACILLUS 102– 189– CIRCULANS 161 216PCHIT_SACER CHITINASE SACCHAROPOLYSPORA  92– ERYTHRAEA 119 PCHIT_STRPLCHITINASE 63 PRECURSOR STREPTOMYCES 250– PLICATUS 284 PCHMU_BACSUCHORISMATE MUTASE BACILLUS  3– SUBTILIS 37 PCHOD_BREST CHOLESTEROLOXIDASE BREVIBACTERIUM 263– PRECURSOR STEROLICUM 290 PCHTA_V1BCH CHOLERAENTEROTOXIN, A VIBRIO  79– CHAIN PRECURSOR CHOLERAE 106 PCHVA_AGRTUBETA-(1 −> 2)GLUCAN AGROBACTERIUM  4– 181– EXPORT PROTEIN TUMEFACIENS 31208 PCHVE_AGRTU RECEPTOR PROTEIN CHVE AGROBACTERIUM 100– PRECURSORTUMEFACIENS 127 PCIR1_CITFR CITROLYSIN PROTEIN I CITROBACTER 435–FREUNDII 462 PCIRA_ECOLI COLICIN 1 RECEPTOR ESCHERICHIA 140– PRECURSORCOLI 173 PCISA_BACSU PUTATIVE DNA RECOMBINASE BACILLUS 378– SUBTILIS 405PCISY_ACIAN CITRATE SYNTHASE ACINETOBACTER 143– ANITRATUM 170PCISY_BACCO CITRATE SYNTHASE BACILLUS  24– COAGULANS 51 PCITA_SALTYCITRATE-PROTON SYMPORT SALMONELLA 154– TYPHIMURIUM 181 PCITN_KLEPNCITRATE-SODIUM SYMPORT KLEBSIELLA 194– PNEUMONIAE 221 PCITN_SALDUCITRATE-SODIUM SYMPORT SALMONELLA 194– DUBLIN 221 PCITN_SALPUCITRATE-SODIUM SYMPORT SALMONELLA 194– PULLORUM 221 PCLCA_PSEPUCHLOROCATECHOL 1,2- PSEUDOMONAS  13– DIOXYGENASE PUTIDA 36 PCLD1_ECOLICHAIN LENGTH ESCHERICHIA 133– DETERMINANT COLI 167 PROTEIN PCLD2_ECOLICHAIN LENGTH ESCHERICHIA 178– 250– DETERMINANT COLI 212 277 PROTEINPCLD_SALTY CHAIN LENGTH SALMONELLA  96– 151– DETERMINANT TYPHIMURIUM 127212 PROTEIN PCLOS_CLOH1 ALPHA-CLOSTRIPAIN CLOSTRIDIUM  30– 497–PRECURSOR HISTOLYTICUM 58 524 PCLPA_ECOL1 ATP-BINDING SUBUNITESCHERICHIA 655– CLPA COLI 695 PCLPA_RHOBL CLPA HOMOLOG PROTEINRHODOPSEUDOMONAS 439– BLASTICA 466 PCLPB_BACNO CLPB HOMOLOG PROTEINBACTEROIDES 116– 442– 558– NODOSUS 157 476 595 PCLPB_ECOLI CLPB PROTEINESCHERICHIA 444– 563– COLI 489 590 PCLPX_AZOV1 CLPX HOMOLOG PROTEINAZOTOBACTER 215– 332– VINELANDII 242 359 PCLPX_ECOLI ATP-BINDING SUBUNITESCHERICHIA 255– CLPX COLI 282 PCN16_ECOLI 2′,3′-CYCLIC- ESCHERICHIA 50– NUC 2′- COLI 77 PHOSPHODIESTERASE PRECURS PCODA_ECOLI CYTOSINEDEAMINASE ESCHERICHIA 102– COLI 129 PCOM1_BACSU A COMPETENCE PROTEIN IBACILLUS 108– 186– SUBTILIS 135 213 PCOMQ_BACSU COMPETENCE REGULATORYBACILLUS 154– PROTEIN SUBTILIS 239 PCOP6_STAAU COP-6 PROTEINSTAPHYLOCOCCUS  7– AUREUS 53 PCOPB_PSESM COPPER RESISTANCE PSEUDOMONAS140– PROTEIN SYRINGAE 167 B PRECURSOR PCORA_ECOLI MAGNESIUM/COBALTESCHERICHIA 134– TRANSPORT COLI 161 PROTEIN CORA PCORA_SALTYMAGNESIUM/COBALT SALMONELLA 134– TRANSPORT TYPHIMURIUM 161 PROTEIN CORAPCOTE_BACSU SPORE COAT PROTEIN E BACILLUS  42– SUBTILIS 92 PCOX1_BRAJACYTOCHROME C OXIDASE BRADYRHIZOBIUM 380– POLYPEPTIDE 1 JAPONICUM 407PCOX1_PARDE CYTOCHROME C OXIDASE PARACOCCUS 383– POLYPEPTIDE IDENITRIFICANS 410 PCOX1_RHOSH CYTOCHROME C OXIDASE RHODOBACTER 396–POLYPEPTIDE I SPHAEROIDES 423 PCOXX_BACFI OXIDASE ASSEMBLY FACTORBACILLUS  36– FIRMUS 63 PCOXX_BACSU OXIDASE ASSEMBLY FACTOR BACILLUS 49– SUBTILIS 76 PCPPB_NEIGO CRYPTIC PLASMID PROTEIN NEISSERIA  72– 165–B GONORRHOEAE 99 209 PCPSB_ECOLI MANNOSE-1-PHOSPHATE ESCHERICHIA 309–GUANYLYLTRANSFERASE COLI 336 PCPSB_SALTY MANNOSE-1-PHOSPHATE SALMONELLA311– GUANYLYLTRANSFERASE TYPHIMURIUM 338 PCPXA_ECOLI SENSOR PROTEIN CPXAESCHERICHIA 254– COLI 281 PCPXG_STRSQ CYTOCHROME P450 105C1 STREPTOMYCESSP 157– 184 PCPXJ_SACER 6-DEOXYERYTHRONOLIDE B SACCHAROPOLYSPORA 233–(DEB) HYDROXYLASE ERYTHRAEA 260 PCPXM_BACSU CYTOCHROME P450 109 BACILLUS240– SUBTILIS 283 PCPXN_ANASP PROBABLE CYTOCHROME ANABAENA SP  98– P450125 PCR27_BACTI 27 KD CRYSTAL PROTEIN BACILLUS 153– THURINGIENSIS 187PCR27_BACTM 27 KD CRYSTAL PROTEIN BACILLUS 153– THURINGIENSIS 187PCR41_BACSH 1.9 KD INSECTICIDAL BACILLUS 276– TOXIN SPHAERICUS 308PCR42_BACSH 1.9 KD INSECTICIDAL BACILLUS 276– TOXIN SPHAERICUS 308PCR43_BACSH 41.9 KD INSECTICIDAL BACILLUS 276– TOXIN SPHAERICUS 308PCR70_BACTD 70 KD CRYSTAL PROTEIN BACILLUS 207– 252– 429– THURINGIENSIS234 279 463 PCR70_BACTO 75 KD CRYSTAL PROTEIN BACILLUS  57– 125– 427–THURINGIENSIS 84 159 464 PCR70_BACTT 70 KD CRYSTAL PROTEIN BACILLUS 199–244– 421– THURINGIENSIS 226 271 455 PCR71_BACTK 70 KD CRYSTAL PROTEINBACILLUS  93– 191– 552– THURINGIENSIS 133 218 615 PCR72_BACTI 72 KDCRYSTAL PROTEIN BACILLUS  74– 383– THURINGIENSIS 111 414 PCR72_BACTK 70KD CRYSTAL PROTEIN BACILLUS  93– 191– 552– THURINGIENSIS 133 218 593PCR77_BACTI 77 KD CRYSTAL PROTEIN BACILLUS 308– 502– THURINGIENSIS 335529 PCREC_ECOLI SENSOR PROTEIN CREC ESCHERICHIA 103– COLI 130PCRED_ECOLI INNER MEMBRANE PROTEIN ESCHERICHIA  94– CRED COLI 121PCRP_ECOLI CATABOLITE GENE ESCHERICHIA  26– 127– ACTIVATOR COLI 53 154SHIGELLA FLEXNERI PCRP_SALTY CATABOLITE GENE SALMONELLA  26– 127–ACTIVATOR TYPHIMURIUM 53 154 KLEBSIELLA AEROGENES PCRTI_ERWHE PHYTOENEDEHYDROGENISE ERWINIA 231– HERBICOLA 258 PCRTI_RHOCA PHYTOENEDEHYDROGENISE RHODOBACTER 389– CAPSULATUS 416 PCRTJ_RHOCA CRTJ PROTEINRHODOBACTER 133– 334– 431– CAPSULATUS 160 361 458 PCRYS_BACTA 132 KDCRYSTAL PROTEIN BACILLUS 721– 875– THURINGIENSIS 755 902 PCRYS_BACTB 130KD CRYSTAL PROTEIN BACILLUS 730– 865– 1053–  THURINGIENSIS 771 892 1080PCRYS_BACTE 133 KD CRYSTAL PROTEIN BACILLUS 736– 890– THURINGIENSIS 770917 PCRYS_BACTI 130 KD CRYSTAL PROTEIN BACILLUS 218– 701– 775–THURINGIENSIS 252 728 802 PCRYS_BACTK 130 KD CRYSTAL PROTEIN BACILLUS737– 865– 1053–  THURINGIENSIS 771 892 1080 PCRYS_BACTS 130 KD CRYSTALPROTEIN BACILLUS 736– 890– THURINGIENSIS 770 917 PCRYT_BACTA 130 KDCRYSTAL PROTEIN BACILLUS 730– 865– 1053–  THURINGIENSIS 771 892 1080PCRYT_BACTE 134 KD CRYSTAL PROTEIN BACILLUS 745– 899– THURINGIENSIS 779926 PCRYT_BACTI 130 KD CRYSTAL PROTEIN BACILLUS 217– 354– 701– 775–THURINGIENSIS 251 384 728 802 PCRYT_BACTK 130 KD CRYSTAL PROTEINBACILLUS 737– 865– THURINGIENSIS 771 892 PCRYU_BACTA 135 KD CRYSTALPROTEIN BACILLUS 736– 890– THURINGIENSIS 770 917 PCRYU_BACTI 130 KDCRYSTAL PROTEIN BACILLUS 217– 700– 774– THURINGIENSIS 251 727 801PCRYU_BACTK 131 KD CRYSTAL PROTEIN BACILLUS 738– 866– 1054– THURINGIENSIS 772 893 1081 PCRYV_BACTA 130 KD CRYSTAL PROTEIN BACILLUS737– 865– 1053–  THURINGIENSIS 771 892 1080 PCRYV_BACTI 135 KD CRYSTALPROTEIN BACILLUS 110– 745– 819– THURINGIENSIS 151 772 846 PCRYV_BACTK133 KD CRYSTAL PROTEIN BACILLUS 736– 390– THURINGIENSIS 770 917PCRYW_BACTA 130 KD CRYSTAL PROTEIN BACILLUS 745– THURINGIENSIS 779PCRYW_BACTK 133 KD CRYSTAL PROTEIN BACILLUS 608– 662– 892– THURINGIENSIS659 696 919 PCRYX_BACTK 139 KD CRYSTAL PROTEIN BACILLUS  92– 227– 605–783– 937– THURINGIENSIS 119 254 632 817 964 PCS32_ECOLI CS3 PILISYNTHESIS ESCHERICHIA  42– 226– 290– 344– 63 KD PROTEIN COLI 69 253 317378 PCS33_ECOLI CS3 PILI SYNTHESIS ESCHERICHIA  90– 154– 208– 48 KDPROTEIN COLI 117 181 242 PCS34_ECOLI CS3 PILI SYNTHESIS ESCHERICHIA  20– 74– 33 KD PROTEIN COLI 47 108 PCSG_HALHA CELL SURFACE HALOBACTERIUM256– 584– GLYCOPROTEIN HALOBIUM 283 611 PRECURSOR PCSG_HALVO CELLSURFACE HALOBACTERIUM 143– 237– GLYCOPROTEIN VOLCANII 170 271 PRECURSORPCSG_METFE CELL SURFACE METHANOTHERMUS  59– GLYCOPROTEIN FERVIDUS 107PRECURSOR PCSG_METSC CELL SURFACE METHANOTHERMUS  59– GLYCOPROTEINSOCIABILIS 107 PRECURSOR PCSOB_ECOLI CS1 FIMBRIAL SUBUNIT B ESCHERICHIA 25– PRECURSOR COLI 56 PCTFA_CLOAB COA-TRANSFERASE CLOSTRIDIUM 118–SUBUNIT A ACETOBUTYLICUM 145 PCTFB_CLOAB COA-TRANSFERASE CLOSTRIDIUM174– SUBUNIT B ACETOBUTYLICUM 208 PCTRB_NEIME INNER-MEMBRANE PROTEINNEISSERIA 152– CTRB MENINGITIDIS 193 PCTX_PSEAE CYTOTOXIN PRECURSORPSEUDOMONAS  78– 124– 160– 217– AERUGINOSA 115 151 194 251 PCVAA_ECOLICOLICIN V SECRETION ESCHERICHIA 104– 163– PROTEIN CVAA COLI 138 219PCVAB_ECOLI COLICIN V SECRETION ESCHERICHIA 151– PROTEIN CVAB COLI 178PCWPM_BACBR MIDDLE CELL WALL BACILLUS 197– 411– 1010–  PROTEIN PRECURSORBREVIS 224 438 1044 PCWPO_BACBR OUTER CELL WALL BACILLUS 178– 560– 947–PROTEIN PRECURSOR BREVIS 216 587 988 PCYAA_BORPE ADENYLATE CYCLASEBORDETELLA  48– 632– 962– PRECURSOR PERTUSSIS 75 659 996 PCYAA_YERINADENYLATE CYCLASE YERSINIA 341– 593– INTERMEDIA 387 620 PCYAB_BORPE CYABPROTEIN BORDETELLA 541– PERTUSSIS 568 PCYAD_BORPE CYAD PROTEINBORDETELLA 178– PERTUSSIS 212 PCYAE_BORPE CYAE PROTEIN BORDETELLA 313–PERTUSSIS 340 PCYB_RHOCA CYTOCHROME B RHODOBACTER  38– CAPSULATUS 65PCYDD_ECOLI TRANSPORT PROTEIN CYDD ESCHERICHIA  3– 382– COLI 30 409PCYF_NOSSP APOCYTOCHROME F NOSTOC SP 209– PRECURSOR 243 PCYMO_ACISPCYCLOHEXANONE ACINETOBACTER SP 439– MONOOXYGENASE 473 PCYNT_SYNP7CARBONIC ANHYDRASE SYNECHOCOCCUS SP 170– 200 PCYNX_ECOLI CYNX PROTEINESCHERICHIA  53– COLI 80 PCYOB_ECOLI CYTOCHROME O UBIQUINOL ESCHERICHIA 31– OXIDASE SUBUNIT 1 COLI 58 PCYPH_SYNP7 PEPTIDYL-PROLYL SYNECHOCOCCUSSP 107– CIS-TRANS 141 ISOMERASE PCYSA_ECOLI SULFATE PERMEASE AESCHERICHIA 164– PROTEIN COLI 191 PCYSB_ECOLI CYS REGULON ESCHERICHIA 3– TRANSCRIPTIONAL COLI 30 ACTIVATOR PCYSB_SALTY CYS REGULON SALMONELLA 3– TRANSCRIPTIONAL TYPHIMURIUM 30 ACTIVATOR PCYSE_ECOLI SERINEESCHERICHIA 164– ACETYLTRANSFERASE COLI 191 PCYSE_SALTY SERINESALMONELLA 164– ACETYLTRANSFERASE TYPHIMURIUM 191 PCYSG_ECOLI SIROHEMSYNTHASE ESCHERICHIA 405– COLI 432 PCYSG_SALTY SIROHEM SYNTHASESALMONELLA 405– TYPHIMURIUM 432 PCYSN_ECOLI SULFATE ADENYLATEESCHERICHIA  64– TRANSFERASE SUBUNIT 1 COLI 91 PCYSW_ECOLI SULFATEPERMEASE ESCHERICHIA 201– W PROTEIN COLI 228 PCYSW_SYNP7 SULFATEPERMEASE SYNECHOCOCCUS SP 211– W PROTEIN 238 PCZCB_ALCEU CATION EFFLUXSYSTEM ALCALIGENES 241– 283– 364– PROTEIN C2CB EUTROPHUS 268 320 391PCZCD_ALCEU CATION EFFLUX SYSTEM ALCALIGENES 139– PROTEIN CZCD EUTROPHUS169 PDACB_BACSU PENICILLIN-BINDING BACILLUS  80– PROTEIN SUBTILIS 107 5*PRECURSOR PDADA_ECOLI D-AMINO ACID ESCHERICHIA 127– DEHYDROGENASE COLI154 PDAGA_ALTHA NA(+)-LINKED ALTEROMONAS 332– D-ALANTNE HALOPLANKTIS 373GLYCINE PERMEASE PDAMX_ECOLI DAMX PROTEIN ESCHERICHIA  68– 349– COLI 95380 PDAPA_ECOLI DIHYDRODIPICOLINATE ESCHERICHIA  27– 157– SYNTHASE COLI54 184 PDAT1_BACSU DNA-PROTEIN-CYSTEINE BACILLUS  13– METHYLTRANSFERASESUBTILIS 47 PDBHA_ECOLI DNA-BINDING PROTEIN ESCHERICHIA  12– HU-ALPHACOLI 39 PDBH_CLOPA DNA-BINDING PROTEIN CLOSTRIDIUM  12– HU PASTEURIANUM53 PDCAM_ECOLI DECARBOXYLASE ESCHERICHIA 146– PROENZYME COLI 173PDCDA_CORGL DIAMINOPIMELATE CORYNEBACTERIUM 134– DECARBOXYLASE GLUTMICUM161 PDCDA_PSEAE DIAMINOPIMELATE PSEUDOMONAS  57– DECARBOXYLASEAERUGINOSA 84 PDCEB_ECOLI GLUTAMATE ESCHERICHIA  4– DECARBOXYLASE COLI31 BETA PDCHS_ENTAE HISTIDINE ENTEROBACTER 111– DECARBOXYLASE AEROGENES138 PDCHS_KLEPL HISTIDINE KLEBSIELLA 111– DECARBOXYLASE PLANTICOLA 138PDCHS_MORMO HISTIDINE MORGANELA 111– DECARBOXYLASE MORGANII 138PDCID_BACSU DIPEPTIDE TRANSPORT BACILLUS 188– PROTEIN DCIAD SUBTILIS 222PDCLY_HAFAL LYSINE DECARBOXYLASE HAFNIA 305– ALVEI 332 PDCOA_KLEPNOXALOACETATE KLEBSIELLA 261– 342– DECARBOXYLASE PNEUMONIAE 288 369 ALPHACHAIN PDCOA_SALTY OXALOACETATE SALMONELLA 261– 342– DECARBOXYLASETYPHIMURIUM 288 369 ALPHA CHAIN PDCOB_SALTY OXALOACETATE SALMONELLA 299–DECARBOXYLASE TYPHIMURIUM 326 BETA CHAIN PDCTB_RHILE TRANSPORT SENSORRHIZOBIUM 377– PROTEIN DCTB LEGUMINOSARUM 411 PDCTB_RHIME TRANSPORTSENSOR RHIZOBIUM 511– PROTEIN DCTB MELILOTI 538 PDEAD_ECOLIATP-DEPENDENT RNA ESCHERICHIA 268– 518– HELICASE DEAD COLI 295 545PDEAD_KLEPN ATP-DEPENDENT RNA KLEBSIELLA 267– 519– HELICASE DEADPNEUMONIAE 294 546 PDEDA_ECOLI DEDA PROTEIN ESCHERICHIA 106– COLI 133PDEGS_BACSU SENSOR PROTEIN DEGS BACILLUS  31–  75– 292– SUBTILIS 70 159327 PDEH2_MORSP HALOACETATE MORAXELLA SP 114– DEHALOGENASE H-2 141PDEOC_ECOLI DEOXYRIBOSE-PHOSPHATE ESCHERICHIA 134– ALDOLASE COLI 161PDHAL_PSEOL ALDEHYDE DEHYDROGENASE PSEUDOMONAS  6– OLEOVORANS 33PDHAS_BACSU ASPARTATE-SEMIALDEHYDE BACILLUS 150– DEHYDROGENASE SUBTILIS184 PDHAS_CORGL ASPARTATE-SEMIALDEHYDE CORYNEBACTERIUM  43– 312–DEHYDROGENASE GLUTMICUM 70 339 PDHAS_ECOLI ASPARTATE-SEMIALDEHYDEESCHERICHIA 229– DEHYDROGENASE COLI 256 PDHAS_VIBCHASPARTATE-SEMIALDEHYDE VIBRIO 309– DEHYDROGENASE CHOLERAE 336 PDHA_BACSHALANTNE DEHYDROGENASE BACILLUS 149– SPHAERICUS 176 PDHA_BACST ALANTNEDEHYDROGENASE BACILLUS  94– STEAROTHERMOPHILUS 121 PDHE2_CLODINAD-SPECIFIC GLUTAMATE CLOSTRIDIUM 116– DEHYDROGENASE DIFFICILE 143PDHE2_PEPAS D-SPECIFIC GLUTAMATE PEPTOSTREPTOCOCCUS 247– 345–DEHYDROGENASE ASACCHAROLYTICUS 274 380 PDHE3_SULSO GLUTAMATEDEHYDROGENASE SULFOLOBUS  2– SOLFATARICUS 36 PDHE4_CORGL NADP-SPECIFICGLUTAMATE CORYNEBACTERIUM 188– 229– DEHYDROGENASE GLUTMICUM 215 256PDHGA_ACICA GLUCOSE DEHYDROGENASE-A ACINETOBACTER  10– 190–CALCOACETICUS 59 217 PDHGB_BACME GLUCOSE 1-DEHYDROGENASE BACILLUS  27– BMEGATERIUM 57 PDHG_ECOLI GLUCOSE DEHYDROGENASE ESCHERICHIA 436– COLI 463PDHKI_STRVN KETOACYL REDUCTASE 1 STREPTOMYCES 168– VIOLACEORUBER 195PDHLE_BACST LEUCINE DEHYDROGENASE BACILLUS 192– STEAROTHERMOPHILUS 219PDHLO_AGRT4 D-LYSOPINE AGROBACTERIUM 317– DEHYDROGENASE TUMEFACIENS 344PDHMI_METEX METHANOL DEHYDROGENASE METHYLOBACTERIUM 153– 190– SUBUNIT 1PREC EXTORQUENS 187 224 PDHMI_METOR METHANOL DEHYDROGENASEMETHYLOBACTERIUM 153– 190– SUBUNIT 1 PREC ORGANOPHILUM 187 224PDHMI_PARDE METHANOL DEHYDROGENASE PARACOCCUS 195– SUBUNIT 1 PRECDENITRIFICANS 222 PDHNA_BACSP NADH DEHYDROGENASE BACILLUS SP 284– 314PDHNA_ECOLI NADH DEHYDROGENASE ESCHERICHIA 180– COLI 214 PDHOM_BACSUHOMOSERINE BACILLUS  73– 406– DEHYDROGENASE SUBTILIS 107 433 PDHOM_CORGLHOMOSERINE CORYNEBACTERIUM 105– DEHYDROGENASE GLUTMICUM 132 PDHPH_BACSHPHENYLALANINE BACILLUS 212– DEHYDROGENASE SPHAERICUS 239 PDHSA_ECOLISUCC DEHYDROGENASE ESCHERICHIA 482– FLAVOPROTEIN SUBUNIT COLI 512PDHSS_ANACY SOLUBLE HYDROGENASE ANABAENA  86– 130– 42 KD SUBUNITCYLINDRICA 113 168 PDHSS_SYNP1 SOLUBLE HYDROGENASE, SYNECHOCOCCUS SP133– SMALL SUBUNIT 160 PDHTM_METME TRIMETHYLAMINE METHYLOTROPHUS 439–DEHYDROGENASE METHYLOPHILUS 466 PDING_ECOLI PROBABLE ATP-DEPENDENTESCHERICHIA 584– HELICASE DING COLI 611 PDIVB_BACSU DIVISION INITIATIONBACILLUS  54– 114– PROTEIN SUBTILIS 82 141 PDLD3_PSEPU DIHYDROLIPOAMIDEPSEUDOMONAS  93– DEHYDROGENASE PUTIDA 120 PDLDH_AZOVI LIPOAMIDEDEHYDROGENASE AZOTOBACTER  18– 224– COMP (E3) VINELANDII 45 276PDLDH_BACST LIPOAMIDE DEHYDROGENASE BACILLUS  82– COMP (E3)STEAROTHERMOPHILUS 124 PDLDH_BACSU LIPOAMIDE DEHYDROGENASE BACILLUS  82–COMP (E3) SUBTILIS 109 PDLDH_ECOLI DIHYDROLIPOAMIDE ESCHERICHIA 108–DEHYDROGENASE COLI 135 PDLDH_PSEFL DIHYDROLIPOAM1DE PSEUDOMONAS 124–223– DEHYDROGENASE FLUORESCENS 151 275 PDMPN_PSEPU PHENOL HYDROXYLASE P3PSEUDOMONAS  63– PROTEIN PUTIDA 90 PDNA1_BACSU DNAK PROTEIN BACILLUS497– 548– SUBTILIS 524 581 PDNA2_BACSU DNAK PROTEIN BACILLUS 456–SUBTILIS 483 PDNAA_BACSU DNAA PROTEIN BACILLUS 316– SUBTILIS 380PDNAA_BORBU DNAA PROTEIN BORRELIA 182– 248– 341– 436– BURGDORFERI 216275 387 463 PDNAA_BUCAP DNAA PROTEIN BUCHNERA  73– 111– 353– APHIDICOLA100 138 380 PDNAA_ECOLI DNAA PROTEIN ESCHERICHIA 366– COLI 400PDNAA_MICLU DNAA PROTEIN MICROCOCCUS 385– LUTEUS 415 PDNAA_MYCCA DNAAPROTEIN MYCOPLASMA  8–  75– 274– 350– CAPRICOLUM 56 112 310 389PDNAA_PROMI DNAA PROTEIN PROTEUS 365– MIRABILIS 399 PDNAA_PSEPU DNAAPROTEIN PSEUDOMONAS 398– PUTIDA 439 PDNAA_SPICI DNAA PROTEIN SPIROPLASMA 45–  76– 145– CITRI 72 110 180 PDNAB_CHLTR DNAB-LIKE PROTEIN CHLAMYDIA312– TRACHOMATIS 353 PDNAB_ECOLI DNAB PROTEIN ESCHERICHIA  82– COLI 109PDNAB_SALTY DNAB PROTEIN SALMONELLA  82– TYPHIMURIUM 109 PDNAC_ECOLIDNAC PROTEIN ESCHERICHIA 146– COLI 190 PDNAK_BACME DNAK PROTEIN BACILLUS497– 548– MEGATERIUM 524 581 PDNAK_BORBU DNAK PROTEIN BORRELIA 512–BURGDORFERI 594 PDNAK_BRUOV DNAK PROTEIN BRUCELLA 248– 512– OVIS 275 546PDNAK_CAUCR DNAK PROTEIN CAULOBACTER 561– CRESCENTUS 588 PDNAK_CLOABDNAK PROTEIN CLOSTRIDIUM 499– ACETOBUTYLICUM 526 PDNAK_CLOPE DNAKPROTEIN CLOSTRIDIUM 496– PERFRINGENS 527 PDNAK_METMA DNAK PROTEINMETHANOSARCINA 523– MAZEI 550 PDNAK_MYCTU DNAK PROTEIN MYCOBACTERIUM502– TUBERCULOSIS 529 PDNAK_STRCO DNAK PROTEIN STREPTOMYCES  45– 533–COELICOLOR 72 572 PDNIR_ECOLI REGULATORY PROTEIN ESCHERICHIA 114– DNIRCOLI 141 PDNLI_ZYMMO DNA LIGASE ZYMOMONAS 658– MOBILIS 712 PDNRJ_STRPETRANSDUCTION PROTEIN STREPTOMYCES  24– DNRJ PEUCETIUS 51 PDOCK_SULSOPROBABLE SIGNAL SULFOLOBUS 104– RECOGNITION SOLFATARICUS 172 PARTICLEPROTE PDP3A_BACSU DNA POLYMERASE III, BACILLUS  58– 417– 1382–  ALPHACHAIN SUBTILIS 85 444 1416 PDP3A_ECOLI DNA POLYMERASE III, ESCHERICHIA 77– ALPHA CHAIN COLI 104 PDP3A_SACER DNA POLYMERASE III,SACCHAROPOLYSPORA 230– ALPHA CHAIN ERYTHRAEA 257 PDP3A_SALTY DNAPOLYMERASE III, SALMONELLA  77– ALPHA CHAIN TYPHIMURIUM 104 PDP3B_BACSUDNA POLYMERASE III, BACILLUS 212– BETA CHAIN SUBTILIS 239 PDP3B_BORBUDNA POLYMERASE III, BORRELIA 266– BETA CHAIN BURGDORFERI 313 PDP3B_BUCAPDNA POLYMERASE III, BUCHNERA  31– 308– BETA CHAIN APHIDICOLA 62 359PDP3B_MICLU DNA POLYMERASE III, MICROCOCCUS 191– BETA CHAIN LUTEUS 218PDP3B_MYCCA DNA POLYMERASE III, MYCOPLASMA  36– BETA CHAIN CAPRICOLUM 70PDP3B_PSEPU DNA POLYMERASE III, PSEUDOMONAS  30– BETA CHAIN PUTIDA 60PDP3B_SPICI DNA POLYMERASE III, SPIROPLASMA  78– 129– 273– BETA CHAINCITRI 112 177 310 PDP3X_BACSU DNA POLYMERASE III BACILLUS 231– SUBUNITSGAMMA AND TAU SUBTILIS 272 PDPC2_ECOLI DNA PRIMASE TRAC-2 ESCHERICHIA691– COLI 743 PDPC4_ECOLI DNA PRIMASE TRAC-4 ESCHERICHIA 401– COLI 448PDPND_STRPN DPND PROTEIN STREPTOCOCCUS  79– PNEUMONIAE 120 PDPO1_BACCADNA POLYMERASE I BACILLUS 208– CALDOTENAX 235 PDPO1_STRPN DNA POLYMERASEI STREPTOCOCCUS 198– 398– 571– 645– PNEUMONIAE 225 425 598 672PDPO1_THEAQ DNA POLYMERASE THERMUS 196– 602– AQUATICUS 223 629PDPO1_THEFL DNA POLYMERASE THERMUS 597– AQUATICUS 628 PDPO2_ECOLI DNAPOLYMERASE II ESCHERICHIA 569– COLI 596 PDPOL_PYRFU DNA POLYMERASEPYROCOCCUS 746– FURIOSUS 773 PDPOL_SULSO DNA POLYMERASE SULFOLOBUS 379–436– 625– 747– SOLFATARICUS 406 463 659 774 PDPOL_THELI DNA POLYMERASETHERMOCOCCUS 332– 551– 892– 1004–  1153–  LITORALIS 370 589 926 10311194 PDPP_LACLA DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS 716– LACTIS 753PDPP_LACLC DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS 716– LACTIS 753PDPS_ECOLI DNA PROTECTION DURING ESCHERICHIA  4– STARVATION PROTEIN COLI45 PDRN1_STREQ DEOXYRIBONUCLEASE STREPTOCOCCUS  33– 291– PRECURSOREQUISIMILIS 60 318 PDRRA_STRPE DAUNORUBICIN RESISTANCE STREPTOMYCES 286–ATP-BINDING PROTEI PEUCETIUS 313 PDYRA_STAAU DIHYDROFOLATE REDUCTASESTAPHYLOCOCCUS  62– TYPE I AUREUS 89 PE13B_BACCI GLUCAN ENDO-1,3-BETA-BACILLUS 134– 305– 424– GLUCOSIDASE A1 PREC CIRCULANS 161 339 451PEAE_ECOLI ATTACHING AND EFFACING ESCHERICHIA  66– 158– 525– 691– 802–871– PROTEIN COLI 100 185 552 725 836 905 PEBGR_ECOLI EBG OPERONREPRESSOR ESCHERICHIA 151– PROTEIN COLI 178 PEBR_STAAU ETHIDIUM BROMIDESTAPHYLOCOCCUS  68– RESISTANCE PROTEIN AUREUS 98 PECHH_RHOCA ENOYL-COAHYDRATASE RHODOBACTER 222– HOMOLOG CAPSULATUS 249 PECPD_ECOLI CHAPERONEPROTEIN ECPD ESCHERICHIA  20– PRECURSOR COLI 47 PEDD_ZYMMOPHOSPHOGLUCONATE ZYMOMONAS  12– DEHYDRATASE MOBILIS 39 PEDIN_STAAUEPIDERMAL CELL DIF INH STAPHYLOCOCCUS  52– 119– PRECURSOR AUREUS 79 146PEF2_DESMO ELONGATION FACTOR 2 DESULFUROCOCCUS 427– MOBILIS 461PEF2_HALHA ELONGATION FACTOR 2 HALOBACTERIUM 186– HALOBIUM 213PEF2_METVA ELONGATION FACTOR 2 METHANOCOCCUS 409– VANNIELII 436PEF2_SULAC ELONGATION FACTOR 2 SULFOLOBUS  36– 145– ACIDOCALDARIUS 63180 PEF2_THEAC ELONGATION FACTOR 2 THERMOPLASMA  13–  49– 220–ACIDOPHILUM 40 76 247 PEFG_ANANI ELONGATION FACTOR G ANACYSTIS 332–NIDULANS 359 PEFG_ECOLI ELONGATION FACTOR G ESCHERICHIA 234– COLI 261PEFG_MYCLE ELONGATION FACTOR G MYCOBACTERIUM 211– 330– LEPRAE 259 357PEFG_SALTY ELONGATION FACTOR G SALMONELLA 234– TYPHIMURIUM 261PEFG_SPIPL ELONGATION FACTOR G SPIRULINA 334– 481– PLATENSIS 374 511PEFG_SYNY3 ELONGATION FACTOR G SYNECHOCYSTIS SP  14– 41 PEFT1_STRRAELONGATION FACTOR TU1 STREPTOMYCES 221– RAMOCISSIMUS 258 PEFT2_STRRAELONGATION FACTOR TU2 STREPTOMYCES 221– RAMOCISSIMUS 258 PEFT3_STRRAELONGATION FACTOR TU3 STREPTOMYCES 228– RAMOCISSIMUS 255 PEFTS_ECOLIELONGATION FACTOR EF-TS ESCHERICHIA 101– COLI 135 PEFTS_SPICI ELONGATIONFACTOR EF-TS SPIROPLASMA  27– 134– CITRI 54 161 PEFTU_BACFR ELONGATIONFACTOR TU BACTEROIDES  18– 229– FRAGILIS 45 256 PEFTU_BACSU ELONGATIONFACTOR TU BACILLUS  11– 230– SUBTILIS 45 257 PEFTU_BURCE ELONGATIONFACTOR TU BURKHOLDERIA  26– CEPACIA 53 PEFTU_CHLTR ELONGATION FACTOR TUCHLAMYDIA 218– TRACHOMATIS 245 PEFTU_DEISP ELONGATION FACTOR TUDEINONEMA SP 230– 257 PEFTU_FLESI ELONGATION FACTOR TU FLEXISTIPES 221–SINUSARABICI 248 PEFTU_HALMA ELONGATION FACTOR TU HALOARCULA  4–MARISMORTUI 31 PEFTU_MICLU ELONGATION FACTOR TU MICROCOCCUS 221– LUTEUS248 PEFTU_MYCHO ELONGATION FACTOR TU MYCOPLASMA 222– HOMINIS 249PEFTU_MYCLE ELONGATION FACTOR TU MYCOBACTERIUM 220– LEPRAE 257PEFTU_MYCTU ELONGATION FACTOR TU MYCOBACTERIUM 220– TUBERCULOSIS 247PEFTU_SHEPU ELONGATION FACTOR TU SHEWANELLA  26– PUTREFACIENS 53PEFTU_STROR ELONGATION FACTOR TU STREPTOCOCCUS 232– ORALIS 259PELAS_PSEAE PSEUDOLYSIN PRECURSOR PSEUDOMONAS 141– AERUGINOSA 168PELTI_ECOLI T-LABILE ENTEROTOXIN A ESCHERICHIA  78– CHAIN PRECURSOR COLI105 PELTJ_ECOLI T-LABILE ENTEROTOXIN A ESCHERICHIA  79– CHAIN PRECURSORCOLI 106 PELTU_CLOPE T-LABILE ENTEROTOXIN B CLOSTRIDIUM 228– CHAINPRECURSOR PERFRINGENS 269 PENTD_ECOLI ENTEROBACTIN SYNTHETASEESCHERICHIA 154– COMPONENT D COLI 188 PENVM_SALTY ENVM PROTEINSALMONELLA  34– TYPHIMURIUM 61 PEPIB_STAEP 117 KD MEMBRANESTAPHYLOCOCCUS  31– 125– 290– 387– 857– ASSOCIATED EPIDERMIDIS 80 229325 421 889 PROTEIN PEPIC_STAEP EPIDERMIN BIOSYNTHESIS STAPHYLOCOCCUS411– PROTEIN EPIC EPIDERMIDIS 447 PEPIP_STAEP SERINE PROTEASE EPIPSTAPHYLOCOCCUS  7– 297– PRECURSOR EPIDERMIDIS 58 324 PEPIY_STAEPHYPOTHETICAL 16.7 KD STAPHYLOCOCCUS  70– PROTEIN IN EPIA EPIDERMIDIS 1015′REGION PEPIZ_STAEP HYPOTHETICAL PROTEIN IN STAPHYLOCOCCUS  42– EPIA5′REGION EPIDERMIDIS 100 PERA_ECOLI GTP-BINDING ERA PROTEIN ESCHERICHIA 18– COLI 45 PERBS_SACER SENSORY TRANSDUCTION SACCHAROPOLYSPORA 209–PROTEIN ERYC1 ERYTHRAEA 243 PEREA_ECOLI ERYTHROMYCIN ESTERASEESCHERICHIA  37– 143– TYPE 1 COLI 64 170 PERY3_SACER ERYTHRONOLIDESYNTHASE, SACCHAROPOLYSPORA  9– 967– 1117–  MODULES 5 AND 6 ERYTHRAEA 36994 1144 PESTA_STRSC ESTERASE PRECURSOR STREPTOMYCES 128– SCABIES 155PESTE_PSEFL ARYLESTERASE PSEUDOMONAS 162– FLUORESCENS 189 PETC1_STAAUENTEROTOXIN TYPE C-1 STAPHYLOCOCCUS  76– 155– PRECURSOR AUREUS 117 206PETC2_STAAU ENTEROTOXIN TYPE C-2 STAPHYLOCOCCUS  76– 155– PRECURSORAUREUS 117 206 PETC3_STAAU ENTEROTOXIN TYPE C-3 STAPHYLOCOCCUS  76– 155–PRECURSOR AUREUS 117 206 PETXA_STAAU ENTEROTOXIN TYPE A STAPHYLOCOCCUS 26– 165– PRECURSOR AUREUS 69 192 PETXB_CLOPE EPSILON-TOXIN, TYPE BCLOSTRIDIUM 209– PRECURSOR PERFRINGENS 236 PETXB_STAAU ENTEROTOXIN TYPEB STAPHYLOCOCCUS  64– 173– PRECURSOR AUREUS 101 207 PETXD_STAAUENTEROTOXIN TYPE D STAPHYLOCOCCUS 153– PRECURSOR AUREUS 200 PETXE_STAAUENTEROTOXIN TYPE E STAPHYLOCOCCUS  26–  88– PRECURSOR AUREUS 69 115PEUTC_SALTY ETHANOLAMINE SALMONELLA 116– AMMONIA-LYASE TYPHIMURIUM 150LIGHT CHAIN PEVGA_ECOLI PUTATIVE TRANSCRIPTION ESCHERICHIA  62– REG EVGACOLI 89 PEVGS_ECOLI PUTATIVE SENSOR PROTEIN ESCHERICHIA  45– 249– 431–526– 829– EVGS COLI 79 276 458 553 856 PEX5B_ECOLI EXODEOXYRIBONUCLEASEV ESCHERICHIA 226– COLI 253 PEXBB_ECOLI BIOPOLYMER TRANSPORT ESCHERICHIA 80– EXBB PROTEIN COLI 107 PEXOA_RHIME SUCCINOGLYCAN RHIZOBIUM 180–BIOSYNTHESIS MELILOTI 207 PROTEIN EXOA PEXOA_STRPN EXODEOXYRIBONUCLEASESTREPTOCOCCUS 215– PNEUMONIAE 254 PEXOF_RHIME EXOF PROTEIN RHIZOBIUM236– 327– MELILOTI 270 361 PEXOH_RHIME SUCCINOGLYCAN RHIZOBIUM 252–BIOSYNTHESIS MELILOTI 279 PROTEIN EXOH PEXOP_RHIME SUCCINOGLYCANRHIZOBIUM 211– 272– 350– BIOSYNTHESIS MELILOTI 242 299 391 PROTEIN EXOPPFADB_ECOLI FATTY OXIDATION COMPLEX ESCHERICHIA  36– 177– ALPHA SUBUNITCOLI 63 204 PFADL_ECOLI FATTY ACID TRANSPORT ESCHERICHIA 220– PROTEINPRECURSOR COLI 247 PFAED_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA 223–421– 507– FAED PRECURSOR COLI 257 453 541 PFAEF_ECOLI K88 MINOR FIMBRIALESCHERICHIA  18– SUBUNIT PRECURSOR COLI 48 PFAND_ECOLI FAND PROTEINPRECURSOR ESCHERICHIA 160– 386– 596– 730– COLI 194 423 623 757PFANE_ECOLI CHAPERONE PROTEIN ESCHERICHIA  22– FANE PRECURSOR COLI 58PFANG_ECOLI FANG PROTEIN PRECURSOR ESCHERICHIA 104– COLI 131 PFANH_ECOLIFANH PROTEIN PRECURSOR ESCHERICHIA  83– COLI 141 PFAOB_PSEFR FATTYOXIDATION COMPLEX PSEUDOMONAS  8– 295– ALPHA SUBUNIT FRAGI 42 322PFDHD_WOLSU FDHD PROTEIN WOLINELLA  64– SUCCINOGENES 98 PFDHF_ECOLIFORMATE DEHYDROGENASE ESCHERICHIA 613– COLI 640 PFDH_PSESR FORMATEDEHYDROGENASE PSEUDOMONAS SP  49– 366– 76 393 PFDNG_ECOLI FORMATEDEHYDROGENASE ESCHERICHIA 288– 323– 696– COLI 315 350 730 PFECA_ECOLITRANSPORT PROTEIN FECA ESCHERICHIA 531– PRECURSOR COLI 561 PFECC_ECOLITRANSPORT PROTEIN I, ESCHERICHIA 210– CYTOSOLIC COLI 237 PFECI_ECOLIFECI PROTEIN ESCHERICHIA 131– COLI 158 PFEMB_STAAU POSSIBLE PROTEIN FEMBSTAPHYLOCOCCUS  22– AUREUS 56 PFENR_SYNP2 FERREDOXIN-NADP SYNECHOCOCCUSSP  4– REDUCTASE 31 PFEPC_ECOLI FERRIC ENTEROBACTIN ESCHERICHIA 176–TRANSPORT PROTEIN FEPG COLI 203 PFEPE_ECOLI FERRIC ENTEROBACTINESCHERICHIA 182– 281– TRANSPORT PROTEIN FEPE COLI 234 308 PFEPG_ECOLIFERRIC ENTEROBACTIN ESCHERICHIA 128– TRANSPORT PROTEIN FEPC COLI 155PFERH_ANASP FERREDOXIN, HETEROCYST ANABAENA SP  2– 29 PFERX_ANASPFERREDOXIN-LIKE PROTEIN ANABAENA SP  67– IN NIF REGION 94 PFHAB_BORPEFILAMENTOUS BORDETELLA 1128–  1359–  2063–  2841–  3051–  3167– HEMAOGLUTININ PERTUSSIS 1158 1386 2114 2868 3085 3194 PFHAC_BORPEHAEMOLYSIN-LIKE PROTEIN BORDETELLA 342– FHAC PRECURSOR PERTUSSIS 369PFHLA_ECOLI FORMATE HYDROGENLYASE ESCHERICHIA  36– 350– 401–TRANSACTIVATOR COLI 63 384 428 PFHUA_ECOLI FERRICHROME-IRON ESCHERICHIA458– RECEPTOR COLI 485 PRECURSOR PFHUB_ECOLI PROTEIN FHUB PRECURSORESCHERICHIA 227– COLI 254 PFHUE_ECOLI OUTER-MEMBRANE RECEPTORESCHERICHIA 587– COLI 614 PFIB_SPICI FIBRIL PROTEIN SPIROPLASMA 161–326– CITRI 195 367 PFIC_ECOLI CELL FILAMENTATION ESCHERICHIA 151–PROTEIN FIC COLI 178 PFIC_SALTY CELL FILAMENTATION SALMONELLA 151–PROTEIN FIC TYPHIMURIUM 178 PFIMC_BORPE OUTER MEMBRANE PROTEINBORDETELLA 208– 540– 618– FIMC PRECURSOR PERTUSSIS 235 567 645PFIMC_ECOLI CHAPERONE PROTEIN FIMC ESCHERICHIA  51– PRECURSOR COLI 78PFIMD_ECOLI FIMD PROTEIN PRECURSOR ESCHERICHIA 222– 458– 534– 563– COLI253 485 561 590 PFIME_ECOLI TYPE 1 FIMBRIAE ESCHERICHIA 165– REGULATORYCOLI 192 PROTEIN FIME PF1MY_SALTY FIMDRIAE Y PROTEIN SALMONELLA  49–TYPHIMURIUM 76 PF1MZ_ECOLI FIMBRIAE Z PROTEIN ESCHERICHIA  42– 162– 196–COLI 69 192 230 PFIMZ_SALTY FIMBRIAE Z PROTEIN SALMONELLA 175–TYPHIMURIUM 209 PFINQ_ECOLI FINQ PROTEIN ESCHERICHIA 145– COLI 172PFIRA_RICR1 F1RA PROTEIN RICKETTSIA 162– RICKETTSII 189 PFIXC_AZOCA FIXCPROTEIN AZORHIZOBIUM 129– CAULINODANS 156 PFIXL_AZOCA SENSOR PROTEINFIXL AZORHIZOBIUM 247– CAULINODANS 274 PFIXL_BRAJA SENSOR PROTEIN FIXLBRADYRHIZOBIUM  27– 253– JAPONICUM 54 280 PFLA1_BORBU FLAGELLAR FILAMENT41 BORRELIA  8– 271– KD CORE PROTEIN BURGDORFERI 35 298 PFLA1_HALHAFLAGELLIN A1 PRECURSOR HALOBACTERIUM  63– 157– HALOBIUM 92 184PFLA1_METVO FLAGELLIN B1 PRECURSOR METHANOCOCCUS  28– 133– VOLTAE 73 160PFLA2_METVO FLAGELLIN B2 PRECURSOR METHANOCOCCUS  28– VOLTAE 66PFLA3_HALHA FLAGELLIN B1 PRECURSOR HALOBACTERIUM  36– HALOBIUM 63PFLA3_METVO FLAGELLIN B3 PRECURSOR METHANOCOCCUS  35– VOLTAE 76PFLA4_HALHA FLAGELLIN B2 PRECURSOR HALOBACTERIUM  36– 157– HALOBIUM 90184 PFLA5_HALHA FLAGELLIN 83 PRECURSOR HALOBACTERIUM  36– 154– HALOBIUM63 181 PFLA6_BACSU FLAA LOCUS 22.9 KD BACILLUS  73– 155– PROTEINSUBTILIS 149 186 PFLAA_CAMCO FLAGELLIN A CAMPYLOBACTER  15– 144– 497–COLI 42 191 535 PFLAA_CAMJE FLAGELLINA CAMPYLOBACTER 220– 310– 500–JEJUNI 266 337 538 PFLAA_METVO FLAGELLIN A PRECURSOR METHANOCOCCUS  28–VOLTAE 62 PFLAA_PSEAE FLAGELLIN PSEUDOMONAS  3–  51–  97– AERUGINOSA 4188 124 PFLAA_RHIME FLAGELLIN RHIZOBIUM 181– 228– 360– MELILOTI 219 265391 PFLAA_SP1AU FLAGELLAR FILAMENT SPIROCHAETA 162– PROTEIN PRECURSORAURANTIA 119 PFLAA_TREHY FLAGELLAR FILAMENT TREPONEMA  55– 219– PROTEINPRECURSOR HYODYSENTERIAE 89 285 PFLAA_TREPA FLAGELLAR FILAMENT TREPONEMA243– OUTER LAYER PROTEIN PALLIDUM 270 PFLAB_CAMCO FLAGELLIN BCAMPYLOBACTER 144– 497– COLI 191 535 PFLAB_CAMJE FLAGELLIN BCAMPYLOBACTER 220– 310– 500– JEJUNI 266 337 538 PFLAB_RHIME FLAGELLINRHIZOBIUM  86– 177– 228– 360– MELILOTI 113 219 255 391 PFLAV_CLOMPFLAVODOXIN CLOSTRIDIUM MP  18– 52 PFLAY_CAUCR REGULATORY PROTEIN FLAYCAULOBACTER 291– 551– CRESCENT 318 578 PFLA_BACSU FLAGELLIN BACILLUS102– 228– SUBTILIS 129 255 PFLGG_BACSU FLAGELLAR BASAL-BODY BACILLUS 62– ROD PROTEIN FLGG SUBTILIS 89 PFLGK_SALTY FLAGELLAR HOOK- SALMONELLA 12– 333– 456– ASSOCIATED TYPHIMURIUM 50 360 540 PROTEIN I PFLGL_ECOLIFLAGELLAR HOOK- ESCHERICHIA  61– 229– ASSOCIATED COLI 105 266 PROTEIN 3PFLGL_SALTY FLAGELLAR HOOK- SALMONELLA  61– 229– ASSOCIATED TYPHIMURIUM105 266 PROTEIN 3 PFLHD_ECOLI FLAGELLAR ESCHERICHIA  6– TRANSCRIPTIONALCOLI 33 ACTIVATOR FLHD PFL1A_PSEAE FLAGELLAR OPERON PSEUDOMONAS 198– RNAPOL AERUGINOSA 232 SIGMA FACTOR PFL1C_ECOLI FLAGELLIN ESCHERICHIA  3–186– 295– 431– COLI 4l 213 329 466 PFL1C_SALCH FLAGELLIN SALMONELLA  5– 54– 136– CHOLERAE-SUIS 41 125 198 PFL1C_SALMU FLAGELLIN SALMONELLA  5– 54– 136– 232– 272– 376– MUENCHEN 41 88 177 259 299 403 PFL1C_SALPAFLAGELLIN SALMONELLA  5–  54– 136– PARATYPHI-A 41 125 184 PFL1C_SALRUFLAGELLIN SALMONELLA  5–  54– 136– RUBISLAW 41 125 196 PFL1C_SALTYFLAGELLIN SALMONELLA  5–  54– 136– TYPHIMURIUM 41 125 200 PFL1C_SERMAFLAGELLIN SERRATIA  15–  55– 103– 137– 275– MARCESCENS 42 89 130 164 321PFLID_ECOLI FLAGELLAR HOOK- ESCHERICHIA  32– 106– 160– 216– 386–ASSOCIATED COLI 66 133 187 298 445 PROTEIN 2 PFLID_SALTY FLAGELLAR HOOK-SALMONELLA  32– 106– 255– 407– ASSOCIATED TYPHIMURIUM 66 133 299 438PROTEIN 2 PFLIE_BACSU FLAG HOOK-BASAL BODY BACILLUS  8– PROTEIN FL1ESUBTILIS 35 PFLIF_BACSU FLAGELLAR M-RING BACILLUS 327– 391– PROTEINSUBTILIS 361 418 PFLIF_CAUCR FLAGELLAR M-RING CAULOBACTER  24– 297– 361–PROTEIN CRESCENTUS 51 324 388 PFLIF_SALTY FLAGELLAR M-RING SALMONELLA484– PROTEIN TYPHIMURIUM 529 PFL1G_BACSU FLAGELLAR SWITCH BACILLUS  35–PROTEIN SUBTILIS 62 FLIG PFLIG_ECOLI FLAGELLAR SWITCH ESCHERICHIA  44–PROTEIN COLI 71 FLIG PFLIH_BACSU PROBABLE FLIII 1 PROTEIN BACILLUS  19–105– SUBTILIS 46 132 PFLIJ_BACSU FLAGELLAR FLIJ PROTEIN BACILLUS  7–SUBTILIS 37 PFLIJ_SALTY FLAGELLAR FLIJ PROTEIN SALMONELLA  75–TYPHIMURIUM 118 PFLIK_BACSU PROBABLE FLIK PROTEIN BACILLUS  77– 117–SUBTILIS 104 144 PFLIL_BACSU FLIL PROTEIN BACILLUS  30–  78– 109–SUBTILIS 71 105 136 PFLIL_ECOLI FLIL PROTEIN ESCHERICHIA 105– COLI 132PFLIL_SALTY FLIL PROTEIN SALMONELLA 103– TYPHIMURIUM 133 PFLIM_BACSUFLIM PROTEIN BACILLUS 148– SUBTILIS 175 PFLIM_ECOLI FLIM PROTEINESCHERICHIA 251– COLI 278 PFLIN_CAUCR FLAGELLAR MOTOR CAULOBACTER  56–SWITCH PROTEIN CRESCENTUS 83 PFL1S_ECOLI FLAGELLAR PROTEIN FLISESCHERICHIA  59– COLI 86 PFLIT_SALTY FLAGELLAR PROTEIN FLIT SALMONELLA 9–  67– TYPHIMURIUM 46 106 PFM12_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS 30–  80– PRECURSOR AERUGINOSA 67 114 PFM1A_ECOLI TYPE-1 FIMBRIALESCHERICHIA  5– PROTEIN, COLI 32 A CHAIN PRECURSOR PFM1C_ECOLI TYPE-1FIMBRIAL ESCHERICHIA  11– PROTEIN, COLI 38 C CHAIN PRECURSOR PFM1_ACTVIFIMBRIAL SUBUNIT ACTINOMYCES 248– 352– 417– TYPE 1 VISCOSUS 282 379 444PRECURSOR PFM98_ECOLI FIMBRIAL PROTEIN 987P ESCHERICHIA 114– PRECURSORCOLI 141 PFMA0_BACNO FIMBRIAL PROTEIN BACTEROIDES 110– PRECURSOR NODOSUS137 PFMA1_BACNO FIMBRIAL PROTEIN BACTEROIDES 107– PRECURSOR NODOSUS 134PFMA2_BACNO FIMBRIAL PROTEIN BACTEROIDES 107– PRECURSOR NODOSUS 134PFMA7_BACNO FIMBRIAL PROTEIN BACTEROIDES 110– PRECURSOR NODOSUS 137PFMAA_BACNO FIMBRIAL PROTEIN BACTEROIDES 123– PRECURSOR NODOSUS 150PFMAF_BACNO FIMBRIAL PROTEIN BACTEROIDES 107– PRECURSOR NODOSUS 141PFMAH_BACNO FIMBRIAL PROTEIN BACTEROIDES  95– PRECURSOR NODOSUS 122PFMAI_BACNO FIMBRIAL PROTEIN BACTEROIDES 111– PRECURSOR NODOSUS 145PFMAJ_BACNO FIMBRIAL PROTEIN BACTEROIDES  96– PRECURSOR NODOSUS 123PFMCD_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS  70– PRECURSOR AERUGINOSA 97PFMDD_BACNO POSSIBLE FIMBRIAL BACTEROIDES 106– 355– ASSEMBLY NODOSUS 144382 PROTEIN FIMD PFMDH_BACNO POSSIBLE FIMBRIAL BACTEROIDES 106– 355–ASSEMBLY NODOSUS 144 382 PROTEIN FIMD PFMF3_ECOLI F17 FIMBRIAL PROTEINESCHERICHIA  97– PRECURSOR COLI 124 PFMM1_NEIME FIMBRIAL PROTEINNEISSERIA  70– PRECURSOR MENINGITIDIS 97 PFMM2_NEIGO FIMBRIAL PROTEINNEISSERIA  66– PRECURSOR GONORRHOEAE 97 PFMM_MORNO FIMBRIAL PROTEINMORAXELLA 108– PRECURSOR NONLIQUEFACIENS 146 PFMP1_PSEAE FIMBRIALPROTEIN PSEUDOMONAS  30–  80– PRECURSOR AERUGINOSA 67 114 PFMP3_PSEAEFIMBRIAL PROTEIN PSEUDOMONAS  70– PRECURSOR AERUGINOSA 97 PFMS1_ECOLICS1 FIMBRIAL SUBUNIT A ESCHERICHIA  60– 112– PRECURSOR COLI 87 139PFMS3_ECOLI CS3 FIMBRIAL SUBUNIT A ESCHERICHIA  49– PRECURSOR COLI 98PFM_HAEIN MAJOR FIMBRIAL SUBUNIT HAEMOPHILUS 102– PRECURSOR INFLUENZAE129 PFNBA_STAAU FIBRONECTIN-BINDING STAPHYLOCOCCUS  41– 188– 311– 431–517– 652– 722– PROTEIN AUREUS 83 215 365 458 555 686 756 PRECURSORPFOLC_ECOLI FOLYLPOLYGLUTAMATE ESCHERICHIA 125– SYNTHASE COLI 159PFOLC_LACCA FOLYLPOLYGLUTAMATE LACTOBACILLUS 129– SYNTHASE CASEI 156PFPG_BACFI FORMAMIDOPYRIMIDINE- BACILLUS 153– DNA GLYCOSYLASE FIRMUS 180PFRDA_ECOLI FUMARATE REDUCTASE ESCHERICHIA 395– FLAVOPROTEIN SUBUNITCOLI 422 PFRDA_WOLSU FUMARATE REDUCTASE WOLINELLA  8– 487– FLAVOPROTEINSUBUNIT SUCCINOGENES 35 514 PFRZE_MYXXA GLIDING MOTILITY MYXOCOCCUS  15–478– REGULATORY PROTEIN XANTHUS 42 505 PFTHS_CLOTH FORMATE- CLOSTRIDIUM163– TETRAHYDROFOLATE THERMOACETUM 190 LIGASE PFTR_METTHFORMYLTRANSFERASE METHANOBACTERIUM  9– THERMOAUTOTROPHICU 43 PFTSA_BACSUCELL DIVISION PROTEIN BACILLUS  76– FTSA SUBTILIS 110 PFTSA_ECOLI CELLDIVISION PROTEIN ESCHERICHIA 301– 375– FTSA COLI 338 418 PFTSJ_ECOLICELL DIVISION PROTEIN ESCHERICHIA  4– FTSJ COLI 31 PFTSL_ECOLI CELLDIVISION PROTEIN ESCHERICHIA  63– FTSL COLI 90 PFTSN_ECOLI CELL DIVISIONPROTEIN ESCHERICHIA 151– FTSN COLI 188 PFTSX_ECOLI CELL DIVISION PROTEINESCHERICHIA 278– FTSX COLI 305 PFTSY_ECOLI CELL DIVISION PROTEINESCHERICHIA 230– FTSY COLI 260 PFUCR_ECOLI L-FUCOSE OPERON ESCHERICHIA 7– ACTIVATOR COLI 45 PFUMA_BACST FUMARATE HYDRATASE BACILLUS 290– CLASS1, AEROBIC STEAROTHERMOPHILUS 317 PFUMH_BACSU FUMARATE HYDRATASEBACILLUS 414– SUBTILIS 445 PFUR_YERPE FERRIC UPTAKE YERSINIA  99–REGULATION PESTIS 130 PROTEIN PG3P1_ECOLI GLYC 3-PHOS ESCHERICHIA 302–DEHYDROGENASE A COLI 329 PG3P2_ANAVA GLYC 3-PHOS ANABAENA  87–DEHYDROGENASE 2 VARIABILIS 114 PG3P3_ANAVA GLYC 3-PHOS ANABAENA 162–DEHYDROGENASE 3 VARIABILIS 189 PG3P3_ECOLI GLYC 3-PHOS ESCHERICHIA 236–DEHYDROGENASE C COLI 324 PG3P_BACME GLYC 3-PHOS BACILLUS  49– 237–DEHYDROGENASE MEGATERIUM 76 271 PG3P_BACSU GLYC 3-PHOS BACILLUS  49–DEHYDROGENASE SUBTILIS 76 PG3P_PYRWO GLYC 3-PHOS PYROCOCCUS 259–DEHYDROGENASE WOESEI 286 PG3P_THEMA GLYC 3-PHOS THERMOTOGA 290–DEHYDROGENASE MARITIMA 328 PG6PB_BACST GLUCOSE-6-PHOSPHATE BACILLUS 103–241– ISOMERASE B STEAROTHERMOPHILUS 143 268 PG6PD_ECOLIGLUCOSE-6-PHOSPHATE 1- ESCHERICHIA 301– DEHYDROGENASE COLI 328PG6PD_ZYMMO GLUCOSE-6-PHOSPHATE 1- ZYMOMONAS 165– DEHYDROGENASE MOBILIS192 PGACA_PSEFL CYANIDE CONTROL PSEUDOMONAS 178– PROTEIN FLUORESCENS 205PGAL1_SALTY GALACTOKINASE SALMONELLA  86– TYPHIMURIUM 113 PGAL7_HAEINGAL-1-PHOS HAEMOPHILUS 124– 239– URIDYLYLTRANSFERASE INFLUENZAE 158 269PGAL7_LACHE GAL-1-PHOS LACTOBACILLUS 304– URIDYLYLTRANSFERASE HELVETICUS338 PGALF_SALTY GALACTOSE OPERON SALMONELLA  53– REPRESSOR TYPHIMURIUM91 PGALR_HAEIN GALACTOSE OPERON HAEMOPHILUS 182– REPRESSOR INFLUENZAE209 PGAL_PSEFL DE D-GALACTOSE 1- PSEUDOMONAS 251– DEHYDROGENASEFLUORESCENS 278 PGCH2_ECOLI GTP CYCLOHYDROLASE II ESCHERICHIA  78– COLI105 PGCH2_PHOLE GTP CYCLOHYDROLASE II PHOTOBACTERIUM 197– 246–LEIOGNATHI 227 273 PGCSH_ECOLI GLYCINE CLEAVAGE ESCHERICHIA  10– SYSTEMH PROTEIN COLI 37 PGCSP_ECOLI GLYCINE DEHYDROGENASE ESCHERICHIA 216–COLI 246 PGCVA_ECOLI GLYCINE CLEAVAGE SYSTEM ESCHERICHIA  60–TRANSACTIVATOR COLI 94 PGENK_ECOLI PROTEIN K ESCHERICHIA  24– COLI 51PGER1_BACSU SPORE GERMINATION BACILLUS  49– 182– 350– PROTEIN I SUBTILIS83 216 384 PGER3_BACSU SPORE GERMINATION BACILLUS 293– PROTEIN SUBTILIS323 III PRECURSOR PGERE_BACSU GERMINATION PROTEIN BACILLUS  13– GERESUBTILIS 40 PGGI2_STAHA ANTIBACTERIAL PROTEIN 2 STAPHYLOCOCCUS  6–HAEMOLYTICUS 33 PGGI3_STAHA ANTIBACTERIAL PROTEIN 3 STAPHYLOCOCCUS  6–HAEMOLYTICUS 33 PGIDA_BACSU GLUCOSE INHIBITED BACILLUS 396– DIVISIONSUBTILIS 423 PROTEIN A PGIDA_ECOLI GLUCOSE INHIBITED ESCHERICHIA 533–DIVISION COLI 568 PROTEIN A PGIDA_PSEPU GLUCOSE INHIBITED PSEUDOMONAS539– DIVISION PUTIDA 566 PROTEIN A PGIDB_BACSU GLUCOSE INHIBITEDBACILLUS  34– DIVISION SUBTILIS 61 PROTEIN B PGIDB_PSEPU GLUCOSEINHIBITED PSEUDOMONAS  25– DIVISION PUTIDA 52 PROTEIN B PGLCP_SYNY3GLUCOSE TRANSPORT SYNECHOCYSTIS SP 288– PROTEIN 322 PGLDA_BACST GLYCEROLDEHYDROGENASE BACILLUS  20– STEAROTHERMOPHILUS 79 PGLGA_ECOLI GLYCOGENSYNTHASE ESCHERICHIA 256– COLI 283 PGLGC_ECOLI GLUCOSE-1-PHOSPHATEESCHERICHIA 114– ADENYLYLTRANSFERASE COLI 141 PGLGC_SALTYGLUCOSE-1-PHOSPHATE SALMONELLA 114– ADENYLYLTRANSFERASE TYPHIMURIUM 141PGLMS_ECOLI GLUC-FRUC-6- ESCHERICHIA 209– PHOSAMINOTRANSFERASE COLI 243PGLN1_METTL GLNB-LIKE PROTEIN I METHANOCOCCUS  58– THERMOLITHOTROPHICUS85 PGLNA_ANASP GLUTAMINE SYNTHETASE ANABAENA SP  8– 42 PGLNA_BACSUGLUTAMINE SYNTHETASE BACILLUS  4– SUBTILIS 31 PGLNA_CLOAB GLUTAMINESYNTHETASE CLOSTRIDIUM 413– ACETOBUTYLICUM 440 PGLNA_ECOLI GLUTAMINESYNTHETASE ESCHERICHIA 144– COLI 171 PGLNA_METVO GLUTAMINE SYNTHETASEMETHANOCOCCUS 203– VOLTAE 230 PGLNA_PROVU GLUTAMINE SYNTHETASE PROTEUS142– VULGARIS 169 PGLNA_PYRFU GLUTAMINE SYNTHETASE PYROCOCCUS 391–FURIOSUS 421 PGLNA_SALTY GLUTAMINE SYNTHETASE SALMONELLA 144–TYPHIMURIUM 171 PGLNA_STRCO GLUTAMINE SYNTHETASE STREPTOMYCES 186–COELICOLOR 213 PGLNB_AZOUR NITROGEN REGULATORY AZOSPIRILLUM  15– PROTEINP-II URASILENSE 49 PGLNB_RHOCA NITROGEN REGULATORY RHODOBACTER  15–PROTEIN P-II CAPSULATUS 49 PGLNB_SYNP6 NITROGEN REGULATORY SYNECHOCOCCUSSP  52– PROTEIN P-II 79 PGLND_ECOLI UDP URIDYLYLTRANSFERASE ESCHERICHIA120– 151– COLI 147 178 PGLND_SALTY UDP URIDYLYLTRANSFERASE SALMONELLA151– TYPHIMURIUM 178 PGLNE_ECOLI ADENYLYLTRANSFERASE ESCHERICHIA 103–433– 763– COLI 130 460 790 PGLNH_ECOLI GLUTAMINE-BINDING ESCHERICHIA126– PROTEIN COLI 153 PRECURSOR PGLNQ_BACST GLUTAMINE PERMEASE BACILLUS 7– OPERON STEAROTHERMOPHILUS 34 PROTEIN GLNQ PGLPD_BACSU AEROBICGLYC-3-PHOS BACILLUS 194– DEHYDROGENASE SUBTILIS 230 PGLPD_ECOLI AEROBICGLYC-3-PHOS ESCHERICHIA 410– DEHYDROGENASE COLI 437 PGLPF_BACSU GLYCEROLUPTAKE BACILLUS 235– FACILITATOR PROTEIN SUBTILIS 274 PGLPK_BACSUGLYCEROL KINASE BACILLUS  44– SUBTILIS 93 PGLPK_ECOLI GLYCEROL KINASEESCHERICHIA  56– COLI 90 PGLPR_ECOLI GLYCEROL-3-PHOSPHATE ESCHERICHIA 5– REGULON REPRESSOR COLI 32 PGLPX_ECOLI GLPX PROTEIN ESCHERICHIA 297–COLI 324 PGLPX_SHIFL GLPX PROTEIN SHIGELLA 297– FLEXNERI 324 PGLRX_ECOLIGLUTAREDOXIN ESCHERICHIA  24– COLI 51 PGLTB_ECOLI GLUTAMATE SYNTHASEESCHERICHIA 482– COLI 509 PGLTP_ECOLI PROTON GLUTAMATE ESCHERICHIA 319–SYMPORT PROTEIN COLI 346 PGLVB_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA 130–ENZYME TYPE-IIB COLI 157 PGLYA_BRAJA SERINE BRADYRHIZOBIUM  29–HYDROXYMETHYL- JAPONICUM 60 TRANSFERASE PGLYA_CAMJE SERINE CAMPYLOBACTER376– HYDROXYMETHYL- JEJUNI 403 TRANSFERASE PGLYA_HYPME SERINEHYPHOMICROBIUM  28– HYDROXYMETHYL- METHYLOVORUM 55 TRANSFERASEPGMG7_BACSU COMG OPERON PROTEIN 7 BACILLUS  37–  88– SUBTILIS 67 122PGNTK_BACSU GLUCONOKINASE BACILLUS 238– SUBTILIS 271 PGP1D_CHLTRVIRULENCE PROTEIN CHLAMYDIA 312– PGP1-D TRACHOMATIS 353 PGP2D_CHLTRVIRULENCE PROTEIN CHLAMYDIA  97– PGP2-D TRACHOMATIS 131 PGP5D_CHLTRVIRULENCE PROTEIN CHLAMYDIA  25– PGP5-D TRACHOMATIS 52 PGP6D_CHLTRVIRULENCE PROTEIN CHLAMYDIA  63– 193– PGP6-D TRACHOMATIS 106 220PGP7D_CHLTR VIRULENCE PROTEIN CHLAMYDIA  12– PGP7-D TRACHOMATIS 60PGP8D_CHLTR VIRULENCE PROTEIN CHLAMYDIA  94– PGP8-D TRACHOMATIS 121PGREA_RICPR TRANSCRIPTION RICKETTSIA  15– ELONGATION PROWAZEKII 49FACTOR GREA PGRPE_BACSU GRPE-LIKE PROTEIN BACILLUS  27– SUBTILIS 73PGRPE_BORBU GRPE-LIKE PROTEIN BORRELIA  2– BURGDORFERI 79 PGRPE_CLOABGRPE-LIKE PROTEIN CLOSTRIDIUM  12– ACETOBUTYLICUM 83 PGRSA_BACBRGRAMICIDIN S SYNTHETASE BACILLUS 545– 799– 840– 1035–  BREVIS 572 826882 1062 PGRSB_BACBR GRAMICIDIN S SYNTHETASE II BACILLUS  48–  94– 241–1126–  1213–  2162–  2559–  2819– 3606– BREVIS 75 121 282 1153 1240 21892586 2846 3633 PGSH1_ECOLI GLUTAMATE-CYSTEINE ESCHERICHIA 239– 274–LIGASE COLI 266 301 PGSHR_ECOLI GLUTATHIONE REDUCTASE ESCHERICHIA 100–270– COLI 134 311 PGSHR_PSEAE GLUTATHIONE REDUCTASE PSEUDOMONAS  80–AERUGINOSA 114 PGS1A_BACSU STARVATION-INDUCIBLE BACILLUS  74– 265–PROTEIN A SUBTILIS 101 296 PGSPD_ERWCA PROTEIN D PRECURSOR ERWINIA 258–516– 589– CAROTOVORA 285 543 619 PGSPD_ERWCH PROTEIN D PRECURSOR ERWINIA259– 307– 551– 659– CHRYSANTHEMI 302 338 578 686 PGSPD_KLEPN PROTEIN DPRECURSOR KLEBSIELLA 259– PNEUMONIAE 286 PGSPE_ERWCA PROTEIN E ERWINIA329– CAROTOVORA 367 PGSPE_ERWCH PROTEIN E ERWINIA 329– CHRYSANTHEMI 367PGSPE_KLEPN PROTEIN E KLEBSIELLA 323– PNEUMONIAE 361 PGSPE_PSEAE PROTEINE PSEUDOMONAS 122– 331– AERUGINOSA 149 369 PGSPF_XANCP PROTEIN FXANTHOMONAS 230– CAMPESTRIS 257 PGSPH_PSEAE PROTEIN H PRECURSORPSEUDOMONAS  18– AERUGINOSA 59 PGSPI_AERHY PROTEIN I PRECURSOR AEROMONAS 27– HYDROPHILA 61 PGSPI_ERWCA PROTEIN I PRECURSOR ERWINIA  35–CAROTOVORA 62 PGSPJ_KLEPN PROTEIN J PRECURSOR KLEBSIELLA 140– PNEUMONIAE167 PGSPK_ERWCA PROTEIN K ERWINIA  28– CAROTOVORA 55 PGSPK_ERWCH PROTEINK ERWINIA  28– CHRYSANTHEMI 55 PGSPK_KLEPN PROTEIN K KLEBSIELLA  72–PNEUMONIAE 99 PGSPK_PSEAE PROTEIN K PSEUDOMONAS 262– AERUGINOSA 289PGSPL_ERWCH PROTEIN L ERWINIA  7– 248– 331– CHRYSANTHEMI 42 286 358PGSPL_XANCP PROTEIN L XANTHOMONAS  39– 297– CAMPESTRIS 73 324PGSPM_ERWCA PROTEIN M ERWINIA 108– CAROTOVORA 145 PGSQD_ERWCH PROTEIN DPRECURSOR ERWINIA 259– 448– 546– 657– CHRYSANTHEMI 302 475 573 684PGTF1_STRDO GLUCOSYLTRANSFERASE-1 STREPTOCOCCUS  42– 177– 212– 464–1382–  1495–  PRECURSOR DOWNEI 69 204 239 491 1416 1529 PGTF2_STRDOGLUCOSYLTRANSFERASE-1 STREPTOCOCCUS 171– 206– 458– 1392–  1497– PRECURSOR DOWNEI 198 233 485 1412 1524 PGTFA_STRMU GLUCOSYLTRANSFERASE-SSTREPTOCOCCUS 297– MUTANS 350 PGTFB_STRMU GLUCOSYLTRANSFERASE-1STREPTOCOCCUS  42– 110– 161– 199– 313– 592– PRECURSOR MUTANS 93 137 188246 347 627 PGTFC_STRMU GLUCOSYLTRANSFERASE-S1 STREPTOCOCCUS  4– 110–235– 330– 614– PRECURSOR MUTANS 40 138 262 361 653 PGTFS_STRDOGLUCOSYLTRANSFERASE-S STREPTOCOCCUS 275– 436– 1281–  PRECURSOR DOWNEI316 463 1315 PGTMR_METTF POSSIBLE G-T METHANOBACTERIUM  80– 148–MISMATCHES THERMOFORMICICUM 107 175 REPAIR ENZYME PGUAA_BACSU GMPSYNTHASE BACILLUS 314– 399– 478– SUBTILIS 348 436 505 PGUAA_ECOLI GMPSYNTHASE ESCHERICHIA 105– COLI 132 PGUB_BACCI BETA-GLUCANASE BACILLUS164– PRECURSOR CIRCULANS 191 PGUB_BACLI BETA-GLUCANASE BACILLUS 132–PRECURSOR LICHENIFORMIS 166 PGUB_BACMA BETA-GLUCANASE BACILLUS 126–PRECURSOR MACERANS 160 PCUNI_BACS4 ENDOGLUCANASE A BACILLUS SP  18– 49PGUN1_BACSU ENDOGLUCANASE BACILLUS 270– 376– PRECURSOR SUBTILIS 304 403PGUN1_BUTFI ENDOGLUCANASE 1 BUTYRIVIBRIO 154– 452– FIBRISOLVENS 181 495PGUN2_BACSU ENDOGLUCANASE BACILLUS 270– PRECURSOR SUBTILIS 304PGUN2_THEFU ENDOGLUCANASE E-2 THERMOMONOSPORA 201– PRECURSOR FUSCA 228PGUN3_BACS4 ENDOGLUCANASE C BACILLUS SP 110– 348– 538– PRECURSOR 137 378565 PGUN3_BACSU ENDOGLUCANASE BACILLUS 270– PRECURSOR SUBTILIS 304PGUN3_FIBSU ENDOGLUCANASE 3 FIBROBACTER 542– PRECURSOR SUCCINOGENES 586PGUN4_THEFU ENDOGLUCANASE E-4 THERMOMONOSPORA 308– PRECURSOR FUSCA 342PGUN5_THEFU ENDOGLUCANASE E-5 THERMOMONOSPORA  44– PRECURSOR FUSCA 71PGUNA_BACLA ENDOGLUCANASE A BACILLUS 410– 454– PRECURSOR LAUTUS 437 481PGUNA_CLOTM ENDOGLUCANASE A CLOSTRIDIUM 354– PRECURSOR THERMOCELLUM 384PGUNA_PSEFL ENDOGLUCANASE A PSEUDOMONAS 762– PRECURSOR FLUORESCENS 789PGUNA_RUMAL ENDOGLUCANASE A RUMINOCOCCUS 294– ALDUS 321 PGUNA_RUMFLCELLODEXTRINASE A RUMINOCOCCUS 276– FLAVEFACIENS 303 PGUNB_BACLAENDOGLUCANASE B BACILLUS 375– PRECURSOR LAUTUS 450 PGUNB_CALSAENDOGLUCANASE B CALDOCELLUM 151– 444– SACCHAROLYTICUM 182 478PGUNB_CELFI ENDOGLUCANASE B CELLULOMONAS 266– PRECURSOR FIMI 293PGUNB_CLOCL ENDOGLUCANASE B CLOSTRIDIUM 144– 266– PRECURSORCELLULOVORANS 171 300 PGUNB_CLOTM ENDOGLUCANASE B CLOSTRIDIUM 514–PRECURSOR THERMOCELLUM 541 PGUNC_CELFI ENDOGLUCANASE C CELLULOMONAS 881–PRECURSOR FIMI 908 PGUNC_PSEFL ENDOGLUCANASE C PSEUDOMONAS  52–PRECURSOR FLUORESCENS 82 PGUND_CLOCE ENDOGLUCANASE D CLOSTRIDIUM 382–PRECURSOR CELLULOLYTICUM 453 PGUND_CLOCL ENDOGLUCANASE D CLOSTRIDIUM145– 271– PRECURSOR CELLULOLYTICUM 172 298 PGUNE_CLOTM ENDOGLUCANASE ECLOSTRIDIUM 158– 207– 284– PRECURSOR THERMOCELLUM 185 214 311PGUNH_CLOTM ENDOGLUCANASE H CLOSTRIDIUM  46– 425– PRECURSOR THERMOCELLUM73 452 PGUNS_ERWCA ENDOGLUCANASE ERWINIA  20– 115– PRECURSOR CAROTOVORA47 149 PGUNX_CLOTM PUTATIVE CLOSTRIDIUM 105– ENDOGLUCANASE XTHERMOCELLUM 139 PGUNZ_CLOSR ENDOGLUCANASE Z CLOSTRIDIUM 296– 522–PRECURSOR STERCORARIUM 326 549 PGUN_BACPO ENDOGLUCANASE BACILLUS 198–POLYMYXA 225 PGUN_BACS1 ENDOGLUCANASE BACILLUS SP 321– PRECURSOR 348PGUN_BACS6 ENDOGLUCANASE BACILLUS SP 198– 501– 623– PRECURSOR 229 528664 PGUTD_ECOLI SORBITOL-6-PHOSPHATE ESCHERICHIA 138– 2-DEHYDROGENASECOLI 165 PGPV1_HALHA GAS VESICLE PROTEIN, HALOBACTERIUM  36– PLASMIDHALOBIUM 63 PGVP2_HALHA GAS VESICLE PROTEIN, HALOBACTERIUM  36–CHROMOSOMAL HALOBIUM 63 PGVPA_APHFL GAS VESICLE PROTEIN APHANIZOMENON 4–  39– FLOS-AQUAE 31 66 PGVPA_FREDI GAS VESICLE PROTEIN FREMYELLA  4– 39– DIPLOSIPHON 31 66 PGVPA_HALME GAS VESICLE PROTEIN HALOBACTERIUM 37– MEDITERRANEI 64 PGVPA_MICBC GAS VESICLE PROTEIN MICROCYSTIS SP  39–66 PGVPA_PSEAN GAS VESICLE PROTEIN PSEUDOANABAENA SP  4–  39– 31 66PGVPC_APHFL GAS VESICLE PROTEIN C APHANIZOMENON  8– FLOS-AQUAE 49PGVPC_HALHA GAS VESICLE PROTEIN C HALOBACTERIUM 150– HALOBIUM 249PGVPC_HALME GAS VESICLE PROTEIN C HALOBACTERIUM 139– MEDITERRANEI 169PGVPD_HALHA GVPD PROTEIN, PLASMID HALOBACTERIUM 110– HALOBIUM 147PGVPD_HALME GVPD PROTEIN HALOBACTERIUM 110– MEDITERRANEI 147 PGVPF_HALHAGVPF PROTEIN, PLASMID HALOBACTERIUM  13– 135– HALOBIUM 47 169PGVPF_HALME GVPF PROTEIN HALOBACTERIUM  13– MEDITERRANEI 47 PGVPF_HALSAGVPF PROTEIN HALOBACTERIUM  8– SALINARIUM 49 PGVPG_HALHA GVPG PROTEIN.PLASMID HALOBACTERIUM  38– HALOBIUM 65 PGVPG_HALME GVPG PROTEINHALOBACTERIUM  38– MEDITERRANEI 72 PGVPH_HALHA GVPH PROTEINHALOBACTERIUM  10– HALOBIUM 40 PGVP1_HALME GVPI PROTEIN HALOBACTERIUM 5– MEDITERRANEI 32 PGVPK_HALHA GVPK PROTEIN HALOBACTERIUM  45– HALOBIUM76 PGVPK_HALME GVPK PROTEIN HALOBACTERIUM  12–  47– MEDITERRANEI 39 74PGVPK_HALSA GVPK PROTEIN HALOBACTERIUM  11–  50– SALINARIUM 38 77PGVPL_HALME GVPL PROTEIN HALOBACTERIUM  44– MEDITERRANEI 78 PGVPN_HALHAGVPN PROTEIN HALOBACTERIUM 113– HALOBIUM 140 PGVPN_HALME GVPN PROTEINHALOBACTERIUM  15– MEDITERRANEI 56 PGVPO_HALME GVPO PROTEINHALOBACTERIUM  69– 105– MEDITERRANEI 96 132 PGYRA_BACSU DNA GYRASESUBUNIT A BACILLUS 380– 429– SUBTILIS 407 499 PGYRA_CAMJE DNA GYRASESUBUNIT A CAMPYLOBACTER 267– 381– 452– 665– JEJUNI 310 408 479 695PGYRA_ECOLI DNA GYRASE SUBUNIT A ESCHERICHIA 266– 449– COLI 293 497PGYRA_KLEPN DNA GYRASE SUBUNIT A KLEBSIELLA 266– 448– 518– PNEUMONIAE293 496 545 PGYRA_MYCPN DNA GYRASE SUBUNIT A MYCOPLASMA  4– PNEUMONIAE31 PGYRA_STAAU DNA GYRASE SUBUNIT A STAPHYLOCOCCUS 129– 346– 430– 647–812– AUREUS 156 373 479 674 839 PGYRB_BACSU DNA GYRASE SUBUNIT BBACILLUS 198– SUBTILIS 239 PGYRB_BORBU DNA GYRASE SUBUNIT B BORRELIA154– BURGDORFERI 181 PGYRB_ECOLI DNA GYRASE SUBUNIT B ESCHERICHIA 616–COLI 643 PGYRB_HALSQ DNA GYRASE SUBUNIT B HALOFERAX SP 230– 257PGYRB_MYCPN DNA GYRASE SUBUNIT B MYCOPLASMA 249– PNEUMONIAE 283PGYRB_NEIGO DNA GYRASE SUBUNIT B NEISSERIA 524– 618– GONORRHOEAE 558 645PGYRB_PSEPU DNA GYRASE SUBUNIT B PSEUDOMONAS 122– 684– PUTIDA 149 711PGYRB_SPICI DNA GYRASE SUBUNIT B SPIROPLASMA  40– 189– 283– 341– 540–CITRI 74 238 310 368 579 PGYRB_STAAU DNA GYRASE SUBUNIT B STAPHYLOCOCCUS252– 291– AUREUS 279 318 PHDHA_ECOLI 7-ALPHA-HYDROXYSTEROID ESCHERICHIA 71– DEHYDROGENASE COLI 98 PHELD_ECOLI HELICASE IV ESCHERICHIA 100– 529–COLI 134 556 PHEL_HAEIN LIPOPROTEIN E PRECURSOR HAEMOPHILUS  58–INFLUENZAE 85 PHEM1_CHLVI GLUTAMYL-TRNA REDUCTASE CHLOROBIUM 232–VIBRIOFORMES 259 PHEM1_ECOLI GLUTAMYL-TRNA REDUCTASE ESCHERICHIA 289–COLI 316 PHEM1_RHOSH 5-AMINOLEVULINIC ACID RHODOBACTER  73– SYNTHASESPHAEROIDES 100 PHEM1_SALTY GLUTAMYL-TRNA REDUCTASE SALMONELLA 289– 344–( TYPHIMURIUM 316 371 PHEM1_SYNY3 GLUTAMYL-TRNA REDUCTASE SYNECHOCYSTISSP 163– 350– 190 377 PHEM2_METSC DELTA-AMINOLEVULINIC METHANOTHERMUS131– ACID DEHYDRATASE SOCIABILIS 158 PHEM4_BACSU PUTATIVE BACILLUS  10–UROPORPHYRINOGEN- SUBTILIS 37 III SYNTHASE PHEM4_ECOLIUROPORPHYRINOGEN-III ESCHERICHIA 211– SYNTHASE COLI 238 PHEMM_ECOLI HEMMPROTEIN ESCHERICHIA 147– COLI 174 PHEMR_YEREN HEMIN RECEPTOR YERSINIA234– PRECURSOR ENTEROCOLITICA 261 PHEMX_ECOLI PUTATIVE ESCHERICHIA  69–185– METHYLTRANSFERASE COLI 138 219 PHEMY_BACSU HEMY PROTEIN BACILLUS217– SUBTILIS 262 PHEMZ_BACSU FERROCHELATASE BACILLUS 199– SUBTILIS 226PHETA_ANASP HETEROCYST ANABAENA SP 184– 357– 521– DIFFERENTIATION 211388 565 PROTEIN PHEXA_STRPN DNA MISMATCH REPAIR STREPTOCOCCUS 426–PROTEIN HEXA PNEUMONIAE 460 PHEXB_STRPN DNA MISMATCH REPAIRSTREPTOCOCCUS 470– PROTEIN HEXB PNEUMONIAE 497 PHFAB_CAUCR POSTRANSACTIVATOR CAULOBACTER  98– PROTEIN HFAB CRESCENTUS 125 PHFLC_ECOLIHFLC PROTEIN ESCHERICHIA 113– COLI 140 PHFLX_ECOLI GTP-BINDINGESCHERICHIA 160– PROTEIN HFLX COLI 196 PHFQ_ECOLI HOST FACTOR-1 PROTEINESCHERICHIA  24– COLI 51 PHIFC_HAEIN PILIATION PROTEIN HIFC HAEMOPHILUS356– 404– 447– PRECURSOR INFLUENZAE 383 431 474 PHIS2_LACLAPHOSPHORIBOSYL-AMP LACTOCOCCUS 126– CYCLOHYDROLASE LACTIS 174PHIS4_ECOLI P-5-A CARBOXAMIDE ESCHERICHIA 125– RIBOTIDE COLI 159PHIS4_LACLA P-5-A CARBOXAMIDE LACTOCOCCUS  49– 181– RIBOTIDE LACTIS 89228 PHIS4_METVA P-5-A CARBOXAMIDE METHANOCOCCUS 115– RIBOTIDE VANNIELII142 PHIS4_SALTY P-5-A CARBOXAMIDE SALMONELLA 125– RIBOTIDE TYPHIMURIUM159 PHIS5_LACLA AMIDOTRANSFERASE HISH LACTOCOCCUS 7– LACTIS 34PHIS6_ECOLI HISF PROTEIN ESCHERICHIA  39– 142– COLI 66 169 PHIS6_SALTYHISF PROTEIN SALMONELLA  39– 142– TYPHIMURIUM 66 169 PHIS7_ECOLIIMIDAZOLEGLYCEROL- ESCHERICHIA 168– PHOSPHATE COLI 199 DEHYDRATASEPHIS7_SALTY IMIDAZOLEGLYCEROL- SALMONELLA 161– PHOSPHATE TYPHIMURIUM 199DEHYDRATASE PHIS8_ECOLI HISTIDINOL-PHOSPHATE ESCHERICHIA 290–AMINOTRANSFERASE COLI 317 PHIS8_HALVO HISTIDINOL-PHOSPHATE HALOBACTERIUM174– AMINOTRANSFERASE VOLCANII 201 PHIS8_LACLA HISTIDINOL-PHOSPHATELACTOCOCCUS 161– AMINOTRANSFERASE LACTIS 188 PHIS8_SALTYHISTIDINOL-PHOSPHATE SALMONELLA 293– AMINOTRANSFERASE TYPHIMURIUM 320PHISQ_SALTY HISTIDINE PERMEASE SALMONELLA  8– MEMBRANE Q PROTEINTYPHIMURIUM 35 PHISX_ECOLI HISTIDINOL ESCHERICHIA 393– DEHYDROGENASECOLI 434 PHISX_LACLA HISTIDINOL LACTOCOCCUS  19– 264– DEHYDROGENASELACTIS 46 303 PHISX_MYCSM HISTIDINOL MYCOBACTERIUM 288– 399–DEHYDROGENASE SMEGMATIS 329 430 PHISX_SALTY HISTIDINOL SALMONELLA 393–DEHYDROGENASE TYPHIMURIUM 434 PHLA_STAAU ALPHA-HEMOLYSIN STAPHYLOCOCCUS 69– PRECURSOR AUREUS 103 PHLY1_ECOLI HEMOLYSIN A, ESCHERICHIA  5–  76–161– 234– 353– 458– 554–  642– CHROMOSOMAL COLI 32 103 224 261 380 492581 728 PHLY2_ECOLI HAEMOLYSIN SECRETION ESCHERICHIA 487– PROTEIN,CHROMOSOMA COLI 514 PHLY4_ECOLI HEMOLYSIN D, ESCHERICHIA 103– 178– 223–CHROMOSOMAL COLI 133 215 331 PHLYA_ACTPL HEMOLYSIN ACTINOBACILLUS  5–136– 184– 273– 350– 459– 846– PLEUROPNEUMONIAE 39 170 218 300 377 527924 PHLYA_ACTSU HEMOLYSIN ACTINOBACILLUS  5– 136– 184– 273– 350– 459–846– SUIS 39 170 218 300 377 500 924 PHLYA_ECOLI HEMOLYSIN A, PLASMIDESCHERICHIA  5–  76– 161– 354– 452– 555– 643– COLI 32 103 262 381 493582 729 PHLYA_PROM1 HEMOLYSIN PRECURSOR PROTEUS 165– 299– 356– 425– 498–528– 610–  705–  747– MIRABILIS 196 338 400 471 525 576 695 742 774 789–841– 966– 1113–  1166–  1225–  1301–  1391– 1483– 823 868 993 1140 11931273 1342 1461 1527 PHLYA_SERMA HEMOLYSIN PRECURSOR SERRATIA 311– 477–558– 625– 718– 830– 1081–  1155– 1249– MARCESCENS 345 504 585 703 745864 1103 1202 1286 1516–  1553 PHLYA_VIBCH HEMOLYSIN PRECURSOR VIBRIO335– 638– CHOLERAE 369 665 PHLYB_ACTPL HAEMOLYSIN SECRETIONACTINOBACILLUS  34– PROTEIN PLEUROPNEUMONIAE 61 PHLYB_ECOLI HAEMOLYSINSECRETION ESCHERICHIA 487– PROTEIN. PLASMID COLI 514 PHLYB_PROM1HEMOLYSIN ACTIVATOR PROTEUS  16– 499– PROTEIN PRECURSOR MIRABILIS 64 547PHLYB_PROVU HAEMOLYSIN SECRETION PROTEUS  34– 487– PROTEIN VULGARIS 68514 PHLYB_SERMA HEMOLYSIN ACTIVATOR SERRATIA 110– PROTEIN PRECURSORMARCESCENS 137 PHLYB_VIBCH HEMOLYSIN SECRETION VIBRIO 335– 413– 458–PROTEIN PRECURSOR CHOLERAE 398 447 524 PHLYC_ACTPL HEMOLYSIN CACTINOBACILLUS 130– PLEUROPNEUMONIAE 157 PHLYD_ACTPL HEMOLYSIN SECRETIONACTINOBACILLUS 191– PROTEIN APPD PLEUROPNEUMONIAE 331 PHLYD_ECOLIHEMOLYSIN D, PLASMID ESCHERICHIA 103– 178– 223– COLI 133 215 331PHLY_HAL17 HALOLYSIN PRECURSOR HALOPHILIC 484– BACTERIA 516 STRAIN 172P1PHMC3_DESVH 43.2 KD PROTEIN IN DESULFOVIBRIO 156– HMC OPERON VULGARIS186 PHMD_METKA H(2)-FORMING METHANOPYRUS  36– DEHYDROGENASE KANDLERI 63PHNS_SERMA DNA-BINDING PROTEIN SERRATIA  35– H-NS MARCESCENS 62PHOLA_ECOLI DNA POLYMERASE III, ESCHERICHIA  94– 288– DELTA SUBUNIT COLI121 322 PHOXA_BRAJA REG PROTEIN HOXA BRADYRHIZOBIUM 113– 444– JAPONICUM163 471 PHOXF_NOCOP HOXS ALPHA SUBUNIT NOCARDIA  4– OPACA 31 PHOXQ_ALCEUHOXQ PROTEIN ALCALIGENES  76– EUTROPHUS 110 PHOXX_BRAJA HOXX PROTEINBRADYRHIZOBIUM 356– JAPONICUM 383 PHP1_DEIRA HEXAGONALLY SURFACEDEINOCOCCUS 585– PROTEIN PRECURSOR RADIODURANS 612 PHPRT_LACLAPHOSPHORIBOSYL- LACTOCOCCUS  3–  71– TRANSFERASE LACTIS 39 105PHRDD_STRCO SIGMA FACTOR HRDD STREPTOMYCES 296– COELICOLOR 323PHRPB_BURSO REGULATORY PROTEIN HRPB BURKHOLDERIA 371– SOLANACEARUM 405PHRPH_PSESY OUTER MEMBRANE PROTEIN PSEUDOMONAS 102– 310– HRPH PRECURSORSYRINGAE 129 344 PHRPS_PSESH PROBABLE REGULATORY PSEUDOMONAS  24–PROTEIN HRPS SYRINGAE 51 PHS18_CLOAB 18 KD HEAT SHOCK CLOSTRIDIUM  67–PROTEIN ACETOBUTYLICUM 108 PHS70_HALMA HEAT SHOCK 70 KD HALOARCULA 522–PROTEIN MARISMORTUI 576 PHS70_MYCLE HEAT SHOCK 70 KD MYCOBACTERIUM 461–501– PROTEIN LEPRAE 488 510 PHS70_MYCPA HEAT SHOCK 70 KD MYCOBACTERIUM460– PROTEIN PARATUBERCULOSIS 487 PHTPG_ECOLI HEAT SHOCK PROTEINESCHERICHIA 221– 482– C62.5 COLI 248 509 PHTRA_ECOLI PROTEASE DOPRECURSOR ESCHERICHIA 373– COLI 400 PHTRE_ECOLI HTRE PROTEIN PRECURSORESCHERICHIA 454– 524– COLI 484 576 PHTR1_HALHA SENSORY RHODOPSIN 1HALOBACTERIUM 413– 479– TRANSDUCER HALOBIUM 471 506 PHTR1_HALSA SENSORYRHODOPSIN 1 HALOBACTERIUM 114– 413– 479– TRANSDUCER SALINARIUM 149 471506 PHUTP_BACSU HUT OPERON POSITIVE BACILLUS  5– REGULATORY PROTEINSUBTILIS 36 PHVTJ_LACHE HELVETICIN J LACTOBACILLUS 174– 306– HELVETICUS212 333 PHYCA_ECOLI FORMATE HYDROGENLYASE ESCHERICHIA  73– 106– SUBUNIT1 COLI 100 133 PHYDG_ECOLI TRANSCRIPTIONAL ESCHERICHIA 251– REGULATORYCOLI 278 PROTEIN HYDaG PHYDG_SALTY TRANSCRIPTIONAL SALMONELLA 251–REGULATORY TYPHIMURIUM 278 PROTEIN HYDG PHYDH_ECOLI SENSOR PROTEIN HYDHESCHERICHIA 312– 360– COLI 339 387 PHYUB_PSESN HYDANTOIN UTILIZATIONPSEUDOMONAS SP 554– PROTEIN B 581 PHYUC_PSESN HYDANTOIN UTILIZATIONPSEUDOMONAS SP  6–  96– PROTEIN 40 123 PIAAL_PSESS INDOLEACETATE-LYSINEPSEUDOMONAS 133– 297– LIGASE SYRINGAE 160 331 PIAP_ECOLI ALK PHOSISOZYME ESCHERICHIA  74– CONVERSION PROTEIN COLI 101 PICEN_ERWAN ICENUCLEATION PROTEIN ERWINIA 326– 422– 534– 614– 662– 721– 758–  854– 950– ANANAS 353 449 561 641 689 748 785 881 977 1046–  1073 PICEN_ERWHEICE NUCLEATION PROTEIN ERWINIA 310– 406– 534– 646– 694– 838– 886–  982–HERBICOLA 337 433 561 673 721 865 913 1009 PICEN_PSEFL ICE NUCLEATIONPROTEIN PSEUDOMONAS 281– 377– 425– 681– 729– 795– FLUORESCENS 308 404452 708 781 852 PICEN_PSESY ICE NUCLEATION PROTEIN PSEUDOMONAS 564– 772–868– 909– SYRINGAE 602 847 895 943 PICEN_XANCT ICE NUCLEATION PROTEINXANTHOMONAS 496– 555– 1168–  1248–  CAMPESTRIS 534 582 1204 1275PICSB_SHIFL INTERCELLULAR SPREAD SHIGELLA  41– 438– PROTEIN FLEXNERI 105467 PIF2_BACST INITIATION FACTOR IF-2 BACILLUS 540– 681–STEAROTHERMOPHILUS 567 708 PIF2_BACSU INITIATION FACTOR IF-2 BACILLUS173– 394– SUBTILIS 208 421 PIF2_ECOLI INITIATION FACTOR IF-2 ESCHERICHIA686– 835– COLI 724 862 PIF2_ENTFC INITIATION FACTOR IF-2 ENTEROCOCCUS579– FAECIUM 627 PIF3_BACST INITIATION FACTOR IF-3 BACILLUS  7–STEAROTHERMOPHILUS 34 PIF3_ECOLI INITIATION FACTOR IF-3 ESCHERICHIA  27– 70– COLI 54 97 PIF3_KLEPN INITIATION FACTOR IF-2 KLEBSIELLA  27–  70–PNEUMONIAE 54 97 PIF3_MYCFE INITIATION FACTOR IF-3 MYCOPLASMA 177–FERMENTANS 211 PIF3_PROVU INITIATION FACTOR IF-3 PROTEUS  2–  70–VULGARIS 29 97 PIF3_SALTY INITIATION FACTOR IF-3 SALMONELLA  27–  70–TYPHIMURIUM 54 97 PIF3_SERMA INITIATION FACTOR IF-3 SERRATIA  19–  70–MARCESCENS 46 97 PIGA_NEIGO IGA-SPECIFIC SERINE NEISSERIA 245– 287– 833–1024–  1377–  1483–  ENDOPEPTIDASE GONORRHOEAE 272 314 860 1058 14041531 PIGGB_STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP  46– 120– 195–PRECURSOR 76 150 222 PIGGG_STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP 46– 120– 195– 270– PRECURSOR 76 150 225 297 PILVH_ECOLI ACETOLACTATESYNTHASE ESCHERICHIA  47– 120– COLI 81 147 PILVH_SALTY ACETOLACTATESYNTHASE SALMONELLA  47– 120– TYPHIMURIUM 81 147 PILVN_LACLAACETOLACTATE SYNTHASE LACTOCOCCUS  20– LACTIS 75 PIMPB_SALTY IMPBPROTEIN SALMONELLA 185– TYPHIMURIUM 212 PIMP_ACICA INOSINE-5′-ACINETOBACTER 166– MONOPHOSPHATE CALCOACETICUS 193 DEHYDROGENASEPIMP_BACSU E-5′-MONOPHOSPHATE BACILLUS 159– DEHYDROGENASE SUBTILIS 186PINA_BACTL IMMUNE INHIBITOR A BACILLUS 103– 324– PRECURSOR THURINGIENSIS130 358 PINLA_LISMO INTERNALIN A LISTERIA 106– 161– 196– MONOCYTOGENES143 188 232 PINLB_LISMO INTERNALIN B PRECURSOR LISTERIA  53– 166– 385–MONOCYTOGENES 94 200 415 PINVA_YEREN INVASIN YERSINIA 501–ENTEROCOLITICA 535 PIPA7_SHIFL 60 KD ANTIGEN SHIGELLA 285– FLEXNERI 312PIPAA_SHIFL 70 KD ANTIGEN SHIGELLA  95– 437– 493– 596– FLEXNERI 136 4755S7 630 PIPAB_SHIDY 62 KD MEMBRANE ANTIGEN SHIGELLA  28–  71– 480– 522–DYSENTERIAE 55 169 507 556 PIPAB_SHIFL 62 KD MEMBRANE ANTIGEN SHIGELLA 28–  71– 480– 522– FLEXNERI 55 169 507 556 PIPAC_SHIDY 42 KD MEMBRANEANTIGEN SHIGELLA  21– 113– 273– 324– PRECURSOR DYSENTERIAE 57 161 300378 PIPAC_SHIFL 42 KD MEMBRANE ANTIGEN SHIGELLA  28– 113– 273– 324–PRECURSOR FLEXNERI 57 161 300 372 PIPAD_SHIDY 37 KD MEMBRANE ANTIGENSHIGELLA  47– 291– IPAD DYSENTERIAE 86 318 PIPAD_SHIFL 36 KD MEMBRANEANTIGEN SHIGELLA  47– 259– 291– FLEXNERI 86 286 318 P1PGB_SHIDY IPGBPROTEIN SHIGELLA 175– DYSENTERIAE 202 PIPGB_SHIFL IPGB PROTEIN SHIGELLA175– FLEXNERI 202 PIPT_PSESS ISOPENTENYL TRANSFERASE PSEUDOMONAS  53–143– SYRINGAE 87 173 PIPYR_ECOLI INORGANIC ESCHERICHIA 138–PYROPHOSPHATASE COLI 172 PIRGA_VIBCH VIRULENCE PROTEIN VIBRIO 212– 336–PRECURSOR CHOLERAE 239 377 PIRGB_VTBCH VIRULENCE REGULATORY VIBRIO  67–PROTEIN IRGB CHOLERAE 97 PIRPA_SYNP7 IRON-REGULATED SYNECHOCOCCUS SP167– PROTEIN A 194 PISBD_SHIDY INSERTION ELEMENT SHIGELLA  86– ISO-ISIDPROTEIN INSB DYSENTERIAE 113 PISBN_SHIDY INSERTION ELEMENT SHIGELLA  6–ISO-ISIN PROTEIN INSB DYSENTERIAE 37 PISB_ECOLI INSERTION ELEMENT ISIESCHERICHIA 112– PROTEIN INSB COLI 149 PISB_SHIFL INSERTION ELEMENT ISISHIGELLA  86– PROTEIN INSB FLEXNERI 113 PISB_SHISO INSERTION ELEMENT ISISHIGELLA  86– PROTEIN INSB SONNEI 113 PISP1_BACSU MAJOR INTRACELLULARBACILLUS 115– 197– 253– SERINE SUBTILIS 142 224 280 PROTEASE PISP_BACPOINTRACELLULAR SERINE BACILLUS 109– PROTEASE POLYMYXA 143 PISTA_ECOLIISTA PROTEIN ESCHERICHIA 183– COLI 210 PISTA_SHISO ISTA PROTEIN SHIGELLA183– SONNEI 210 PIUTA_ECOLI FERRIC AEROBACTIN ESCHERICHIA 186– 525– 559–RECEPTOR COLI 213 552 593 PRECURSOR PJAG_BACSU JAG PROTEIN BACILLUS  68–SUBTILIS 95 PK6P2_ECOLI 6-PHOSPHOFRUCTOKINASE ESCHERICHIA 143– ISOZYME 2COLI 170 PKAD_BACSU ADENYLATE KINASE BACILLUS 188– SUBTILIS 215PKAD_LACLA ADENYLATE KINASE LACTOCOCCUS 186– LACTIS 213 PKANU_BACSPKANAMYCIN BACILLUS SP  69– NUCLEOTIDYLTRANSFERASE 96 PKANU_STAAUKANAMYCIN STAPHYLOCOCCUS  69– 4 NUCLEOTIDYLTRANSFERASE AUREUS 96PKDGT_ECOLI 2-KETO-3-DEOXYGLUCONATE ESCHERICHIA  70– PERMEASE COLI 97PKDGT_ERWCH 2-KETO-3-DEOXYGLUCONATE ERWINIA 126– PERMEASE CHRYSANTHEMI153 PKDTA_ECOLI 3-DEOXY-D-MANNO- ESCHERICHIA 369– OCTULOSONIC-ACID TRANSCOLI 396 PKGTP_ECOLI ALPHA-KETOGLUTARATE ESCHERICHIA  7– PERMEASE COLI34 PKGUA_ECOLI GUANYLATE KINASE ESCHERICHIA 162– COLI 189 PKHSE_BACSUHOMOSERINE KINASE BACILLUS  49– SUBTILIS 76 PKHSE_FRED1 HOMOSERINEKINASE FREMYELLA  52– DIPLOSIPHON 79 PKKA4_BACCI AMINOGLYCOSIDE 3′-BACILLUS  12– PHOSPHOTRANSFERASE CIRCULANS 39 PKORB_ECOLI KORBTRANSCRIPTIONAL ESCHERICHIA 228– REPRESSOR PROTEIN COLI 255 PKPYI_SPICIPYRUVATE KINASE SPIROPLASMA 112– CITRI 148 PKPYK_BACST PYRUVATE KINASEBACILLUS 331– STEAROTHERMOPHILUS 374 PLACA_STAAU ISOMERASE LACA SUBUNITSTAPHYLOCOCCUS  9– AUREUS 64 PLACA_STRMU ISOMERASE LACA SUBUNITSTREPTOCOCCUS  26– MUTANS 60 PLACC_STRMU TAGATOSE-6-PHOSPHATESTREPTOCOCCUS  56– 283– KINASE MUTANS 83 310 PLACG_LACCA 6-PHOSPHO-BETA-LACTOBACILLUS 290– GALACTOSIDASE CASEI 317 PLACI_ECOLI LACTOSE OPERONESCHERICHIA  9– REPRESSOR COLI 36 PLACI_KLEPN LACTOSE OPERON KLEBSIELLA195– REPRESSOR PNEUMONIAE 229 PLACR_STAAU PHOSPHOTRANSFERASESTAPHYLOCOCCUS  2– REPRESSOR AUREUS 29 PLACR_STRMU PHOSPHOTRANSFERASESTREPTOCOCCUS  2– REPRESSOR MUTANS 32 PLACY_LACDE LACTOSE PERMEASELACTOBACILLUS 196– DELBRUCKII 230 PLAFB_VIBPA FLAGELLAR HOOK- VIBRIO 62– 388– ASSOCIATED PARAHAEMOLYTICUS 89 415 PROTEIN 2 PLAMB_KLEPNMALTOPORIN PRECURSOR KLEBSIELLA 337– PNEUMONIAE 364 PLAMI_CLOTMENDO-1,3(4)-BETA- CLOSTRIDIUM 132– GLUCANASE THERMOCELLUM 159 PRECURSORPLASI_PSEAE OHHL SYNTHESIS PROTEIN PSEUDOMONAS 171– LASI AERUGINOSA 198PLCCI_LEUGE PROBABLE LEUCOCIN LEUCONOSTOC  41– IMMUNITY GELIDUM 71PROTEIN PLCNC_LACLA LACTOCOCCIN A SECRETION LACTOCOCCUS 162– 207– 388–PROTEIN LCNC LACTIS 189 234 433 PLCND_LACLA LACTOCOCCIN A SECRETIONLACTOCOCCUS  99– 140– 237– PROTEIN LCND LACTIS 126 202 307 PLCRD_YERENLOW CALCIUM RESPONSE YERSINIA 122– 491– LOCUS PROTEIN D ENTEROCOLITICA149 518 PLCRD_YERPE LOW CALCIUM RESPONSE YERSINIA 122– 491– LOCUSPROTEIN D PESTIS 149 518 PLCRV_YERPE VIRULENCE-ASSOCIATED V YERSINIA 22– 157– 240– ANTIGEN PESTIS 49 184 267 PLCRV_YERPSVIRULENCE-ASSOCIATED V YERSINIA  22– 240– ANTIGEN PSEUDOTUBERCULOSIS 49267 PLCTB_BACCA LCTB PROTEIN BACILLUS  18– CALDOTENAX 45 PLCTB_BACSTICTB PROTEIN BACILLUS  14– STEAROTHERMOPHILUS 45 PLDHD_LACPL D-LACTATEDEHYDROGENASE LACTOBACILLUS  51– PLANTARUM 81 PLDHP_BACPS L-LACTATEBACILLUS  2– 241– 279– DEHYDROGENASE P PSYCHROSACCHAROLYTICUS 43 272 306PLDHX_BACPS L-LACTATE BACILLUS  2– 241– 279– DEHYDROGENASE XPSYCHROSACCHAROLYTICUS 43 275 306 PLDH_BACME L-LACTATE DEHYDROGENASEBACILLUS 244– MEGATERIUM 274 PLDH_BACST L-LACTATE DEHYDROGENASE BACILLUS241– 279– STEAROTHERMOPHILUS 268 313 PLDH_BACSU L-LACTATE DEHYDROGENASEBACILLUS  8– 240– SUBTILIS 42 267 PLDH_BIFLO L-LACTATE DEHYDROGENASEBIFIDOBACTERIUM  22– LONGUM 49 PLDH_LACPL L-LACTATE DEHYDROGENASELACTOBACILLUS 197– PLANTARUM 231 PLDH_LISMO L-LACTATE DEHYDROGENASELISTERIA  42– MONOCYTOGENES 69 PLDH_MYCHY L-LACTATE DEHYDROGENASEMYCOPLASMA 276– HYOPNEUMONIAE 310 PLDH_THEAQ L-LACTATE DEHYDROGENASETHERMUS  3– AQUATICUS 30 PLEF_BACAN LETHAL FACTOR PRECURSOR BACILLUS165– 304– 480– 548– 619– 737– ANTHRACIS 192 331 514 578 658 764PLEPA_PSEFL LEPA PROTEIN PSEUDOMONAS  23– FLUORESCENS 50 PLEP_BACSUSIGNAL PEPTIDASE I BACILLUS  3– SUBTILIS 30 PLEU1_ECOLI2-ISOPROPYLMALATE ESCHERICHIA 437– SYNTHASE COLI 464 PLEUI_LACLA2-ISOPROPYLMALATE LACTOCOCCUS  22– 379– SYNTHASE LACTIS 49 484PLEU3_BACCO 3-ISOPROPYLMALATE BACILLUS 331– DEHYDROGENASE COAGULANS 358PLEU3_CLOPA 3-ISOPROPYLMALATE CLOSTRIDIUM 185– DEHYDROGENASE,PASTEURIANUM 212 PLEUD_LACLA 3-ISOPROPYLMALATE LACTOCOCCUS 163–DEHYDRATASE LACTIS 190 PLEVR_BACSU TRANSCRIPTIONAL BACILLUS 297– 676–744– 785– REGULATORY SUBTILIS 324 703 774 822 PROTEIN LEVR PLEXA_ERWCALEXA REPRESSOR ERWINIA 146– CAROTOVORA 173 PLIP1_MORSP LIPASE 1MORAXELLA SP  26– 53 PLIP2_MORSP LIPASE 2 MORAXELLA SP 356– 383PLIPB_ECOLI LIPB PROTEIN ESCHERICHIA  66– COLI 93 PLIP_BURCE LIPASEPRECURSOR BURKHOLDERIA 176– CEPACIA 203 PLIP_PSEFL LIPASE PRECURSORPSEUDOMONAS  8– FLUORESCENS 35 PLIP_PSES5 LIPASE PRECURSOR PSEUDOMONASSP 176– 203 PLIP_STAAU LIPASE PRECURSOR STAPHYLOCOCCUS  80– 512– AUREUS146 546 PLIVB_SALTY LEU/ILE/VAL/THR- SALMONELLA 193– BINDING TYPHIMURIUM220 PROTEIN PRECURSOR PL1VC_SALTY LEUCINE-SPECIFIC SALMONELLA 195–BINDING TYPHIMURIUM 222 PROTEIN PRECURSOR PLIVE_SALTY AMINO ACIDTRANSPORT SALMONELLA 121– PROTEIN LIVE TYPHIMURIUM 148 PLIVF_ECOLI AMINOACID TRANSPORT ESCHERICHIA  23– PROTEIN LIVE COLI 50 PLIVJ_CITFRLEU/ILE/VAL-BINDING CITROBACTER 195– PROTEIN PRECURSOR FREUNDII 222PLIVJ_ECOLI LEU/ILE/VAL-BINDING ESCHERICHIA 195– PROTEIN PRECURSOR COLI222 PLIVK_ECOLI LEUCINE-SPECIFIC ESCHERICHIA 195– BINDING COLI 222PROTEIN PRECURSOR PLIVM_ECOLI AMINO ACID TRANSPORT ESCHERICHIA 121–PROTEIN LIVM COLI 148 PLKTA_ACTAC LEUKOTOXIN ACTINOBACILLUS 113– 173–398– 451– 593– 655– ACTINOMYCETEMCOMITANS 147 213 443 488 620 711PLKTA_PASHA LEUKOTOXIN PASTEURELLA  53– 179– 345– 409– 455– 496– 545– 811–  853– HAEMOLYTICA 99 216 372 436 482 530 572 838 926 PLKTB_ACTACLEUKOTOXIN SECRETION ACTINOBACILLUS 487– PROTEIN ACTINOMYCETEMCOMITANS514 PLKTB_PASHA LEUKOTOXIN SECRETION PASTEURELLA  42–  78– 488– PROTEINHAEMOLYTICA 69 105 515 PLKTC_ACTAC LTC PROTEIN ACTINOBACILLUS  58– 116–ACTINOMYCETEMCOMITANS 85 150 PLKTC_PASHA LKTC PROTEIN PASTEURELLA 123–HAEMOLYTICA 157 PLKTD_AC+Z,889AC LKTD PROTEIN ACTINOBACILLUS 116– 205–278– 364– ACTINOMYCETEMCOMITANS 164 242 305 391 PLKTD_PASHA LKTD PROTEINPASTEURELLA 184– HAEMOLYTICA 289 PLON_ECOLI ATP-DEPENDENT PROTEASEESCHERICHIA 121– LA COLI 148 PLPXA_RICRI UDP-N-ACETYLGLUCOSAMINERICKETTSIA 229– ACYLTRANSFERASE RICKETTSII 256 PLSPA_ECOLI LIPOPROTEINSIGNAL ESCHERICHIA  10– PEPTIDASE COLI 37 PLSPA_STAAU LIPOPROTEIN SIGNALSTAPHYLOCOCCUS 134– PEPTIDASE AUREUS 161 PLUKF_STAAU LEUKOCIDIN FSUBUNIT STAPHYLOCOCCUS 161– PRECURSOR AUREUS 195 PLUKS_STAAU LEUKOCIDINS SUBUNIT STAPHYLOCOCCUS 157– PRECURSOR AUREUS 207 PLUXA_KRYAL ALKANALMONOOXYGENASE KRYPTOPHANARON 190– ALPHA CHAIN ALFREDI 217 PLUXB_PHOPOALKANAL MONOOXYGENASE PHOTOBACTERIUM 188– 257– BETA CHAIN PHOSPHOREUM217 291 PLUXB_VIBHA ALKANAL MONOOXYGENASE VIBRIO 373– BETA CHAIN HARVEYI400 PLUXC_PHOLE ACYL-COA REDUCTASE PHOTOBACTERIUM  44– LEIOGNATHI 81PLUXC_PHOPO ACYL-COA REDUCTASE PHOTOBACTERIUM  54– PHOSPHOREUM 91PLUXC_VIBFI ACYL-COA REDUCTASE VIBRIO  16– FISCHERI 65 PLUXC_XENLUACYL-COA REDUCTASE XENORHABDUS  39– LUMINESCENS 69 PLUXD_PHOLE ACYLTRANSFERASE PHOTOBACTERIUM  89– 218– LEIOGNATHI 119 245 PLUXE_VIBHALUCIFERIN-COMPONENT VIBRIO  30– LIGASE HARVEYI 57 PLUXF_PHOLENON-FLUORESCENT PHOTOBACTERIUM 145– FLAVOPROTEIN LEIOGNATHI 172PLUXF_PHOPO NON-FLUORESCENT PHOTOBACTERIUM  37–  99– FLAVOPROTEINPHOSPHOREUM 85 126 PLUXG_VIBFI PROBABLE FLAVIN VIBRIO 137– REDUCTASEFISCHERI 168 PLUXH_VIBHA LUXH PROTEIN VIBRIO  96– HARVEYI 123PLUXI_VIBFI OHHL SYNTHESIS PROTEIN VIBRIO  30– LUXI FISCHERI 58PLUXJ_VIBFI OHHL SYNTHESIS PROTEIN VIBRIO  30– LUXI FISCHERI 57PLUXP_PHOPO LUMAZINE PROTEIN PHOTOBACTERIUM  51– 162– PHOSPHOREUM 85 189PLUXR_VIBHA LUXR REGULATORY PROTEIN VIBRIO  61– HARVEYI 88 PLXB1_PHOLEALKANAL MONOOXYGENASE PHOTOBACTERIUM 268– BETA CHAIN LEIOGNATHI 295PLXB2_PHOLE ALKANAL MONOOXYGENASE PHOTOBACTERIUM 228– BETA CHAINLEIOGNATHI 255 PLYB_BACSU B-ENZYME BACILLUS  87– SUBTILIS 114 PLYC_CLOABAUTOLYTIC LYSOZYME CLOSTRIDIUM  91– ACETOBUTYLICUM 118 PLYSP_ECOLILYSINE-SPECIFIC ESCHERICHIA 142– PERMEASE COLI 176 PLYTB_BACSU AMIDASEENHANCER BACILLUS  55– 150– 467– 555– PRECURSOR SUBTILIS 82 177 513 585PLYTB_ECOLI LYTB PROTEIN ESCHERICHIA 210– COLI 237 PLYTC_BACSU AMIDASEPRECURSOR BACILLUS 179– 225– SUBTILIS 213 252 PLYTR_BACSU MEMBRANE-BOUNDPROTEIN BACILLUS  13– 259– LYTR SUBTILIS 64 303 PM12_STRPY M PROTEIN,SEROTYPE 12 STREPTOCOCCUS  46– 114– 191– 305– 383– 436– PRECURSORPYOGENES 92 156 300 342 417 494 PM24_STRPY M PROTEIN. SEROTYPE 24STREPTOCOCCUS  12–  89– 175– 245– 280– 399– PRECURSOR PYOGENES 46 128202 272 313 457 PM49_STRPY M PROTEIN. SEROTYPE 49 STREPTOCOCCUS  12–269– PRECURSOR PYOGENES 174 327 PM5_STRPY M PROTEIN. SEROTYPE 5STREPTOCOCCUS  5–  56– 306– 352– PRECURSOR PYOGENES 39 263 333 410PM6_STRPY M PROTEIN. SEROTYPE 6 STREPTOCOCCUS  12–  70– 290– 343–PRECURSOR PYOGENES 39 282 324 401 PMALE_ECOLI MALTOSE-BINDING PROTEINESCHERICHIA  20– PRECURSOR COLI 47 PMALE_ENTAE MALTOSE-BINDING PROTEINENTEROBACTER  20– PRECURSOR AEROGENES 47 PMALK_ENTAE INNER MEMBRANEPROTEIN ENTEROBACTER  3– MALK AEROGENES 30 PMALT_ECOLI MALT REGULATORYPROTEIN ESCHERICHIA 852– COLI 879 PMALX_STRPN MALX PROTEIN PRECURSORSTREPTOCOCCUS  40– 180– PNEUMONIAE 67 207 PMANB_BACSM1,4-BETA-MANNOSIDASE A BACILLUS SP 410– AND B PREC 441 PMANB_CALSAB-MANNANASE/ CALDOCELLUM 389– 592– 1222–  1296–  ENDOGLUCANASESACCHAROLYTICUM 423 626 1256 1323 A PREC PMAOX_BACST MALATEOXIDOREDUCTASE BACILLUS 246– STEAROTHERMOPHILUS 273 PMARR_ECOLIANTIBIOTIC RESISTANCE ESCHERICHIA  95– PROTEIN MARR COLI 122 PMBEB_ECOLIMOBILIZATION PROTEIN ESCHERICHIA  38– 100– MBEB COLI 65 134 PMBHL_WOLSUQUINONE-REAC NI/FE- WOLINELLA 440– HYDROGENASE SUCCINOGENES 471PMCBB_ECOLI MCBB PROTEIN ESCHERICHIA  47– 122– COLI 74 163 PMCBD_ECOLIMCBD PROTEIN ESCHERICHIA 172– 226– 306– COLI 206 253 345 PMCP1_ECOLIMETHYL-ACCEPTING ESCHERICHIA 272– CHEMOTAXIS PROTEIN I COLI 299PMCP2_ECOLI METHYL-ACCEPTING ESCHERICHIA 258– CHEMOTAXIS PROTEIN II COLI306 PMCP2_SALTY METHYL-ACCEPTING SALMONELLA 258– CHEMOTAXIS PROTEIN IITYPHIMURIUM 306 PMCP3_ECOLI METHYL-ACCEPTING ESCHERICHIA 288– CHEMOTAXISPROTEIN III COLI 315 PMCP4_ECOLI METHYL-ACCEPTING ESCHERICHIA 111– 164–277– CHEMOTAXIS PROTEIN IV COLI 145 191 304 PMCPA_CAUCR CHEMORECEPTORMCPA CAULOBACTER 260– 369– 516– CRESCENTUS 287 403 543 PMCPC_SALTYCHEMOTAXIS CITRATE SALMONELLA 314– TRANSDUCER TYPHIMURIUM 348PMCPD_ENTAE CHEMOTAXIS ASPARTATE ENTEROBACTER 275– TRANSDUCER AEROGENES302 PMCPS_ENTAE CHEMOTAXIS SERINE ENTEROBACTER  41– 158– 317– 488–TRANSDUCER AEROGENES 68 208 351 522 PMCRA_ECOLI SPECIFIC RESTRICTIONESCHERICHIA  37– ENZYME A COLI 71 PMCRA_METBA METHYL-COENZYME MMETHANOSARCINA 375– REDUCTASE BARKERI 405 PMCRA_METVA METHYL-COENZYME MMETHANOCOCCUS 335– REDUCTASE VANNIELII 362 PMCRA_METVO METHYL-COENZYME MMETHANOCOCCUS 336– REDUCTASE VOLTAE 363 PMCRB_METFE METHYL-COENZYME MMETHANOTHERMUS 267– REDUCTASE FERVIDUS 294 PMCRB_METVO METHYL-COENZYME MMETHANOCOCCUS 247– REDUCTASE VOLTAE 274 PMCRC_ECOLI MCRC PROTEINESCHERICHIA 111– COLI 145 PMCRD_METVO REDUCTASE OPERON METHANOCOCCUS 54– PROTEIN D VOLTAE 91 PMDH_ECOLI MALATE DEHYDROGENASE ESCHERICHIA127– COLI 154 PMDH_METFE MALATE DEHYDROGENASE METHANOTHERMUS  54–FERVIDUS 88 PMDH_SALTY MALATE DEHYDROGENASE SALMONELLA 127– TYPHIMURIUM154 PMDL_ECOLI MDL PROTEIN ESCHERICHIA 464– 684– 992– COLI 491 711 1019PMDOH_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA 119– MDOH COLI 152PMECI_STAEP METHICILLIN RESIS REG STAPHYLOCOCCUS  88– PROTEIN MECI 122EPIDERMIDIS & AUREUS PMECR_STAEP METHICILLIN RESISTANCE STAPHYLOCOCCUS439– 546– MECR1 PROTEIN 495 573 EPIDERMIDIS & AUREUS PMEMB_METCA METHANEMONOOXYGENASE METHYLOCOCCUS 214– COMPONENT A CAPSULATUS 248 PMEMB_METTRMETHANE MONOOXYGENASE METHYLOSINUS 321– COMPONENT A TRICHOSPORIUM 348PMEND_ECOLI SHCHC SYNTHASE ESCHERICHIA 333– COLI 367 PMER4_STRLIPROBABLE HG TRANSPORT STREPTOMYCES 159– PROTEIN LIVIDANS 186 PMERA_BACSRMERCURIC REDUCTASE BACILLUS SP 146– 180 PMERA_STAAU MERCURIC REDUCTASESTAPHYLOCOCCUS 292– 352– AUREUS 347 386 PMERR_STAAU MERCURIC RESISTANCESTAPHYLOCOCCUS  86– OPERON REG PROTEIN AUREUS 113 PMETB_ECOLICYSTATHIONINE GAMMA- ESCHERICHIA 356– SYNTHASE COLI 383 PMETC_ECOLICYSTATHIONINE ESCHERICHIA 363– BETA-LYASE COLI 390 PMETC_SALTYCYSTATHIONINE SALMONELLA  2– BETA-LYASE TYPHIMURIUM 29 PMETE_ECOLIMETHIONINE SYNTHASE ESCHERICHIA 448– COLI 482 PMETH_ECOLI METHIONINESYNTHASE ESCHERICHIA 371– 642– COLI 398 676 PMFD_ECOLITRANSCRIPTION-REPAIR ESCHERICHIA 185– COUPLING FACTOR COLI 212PMGLA_ECOLI GALACTOSIDE-BINDING ESCHERICHIA  62– 312– PROTEIN COLI 89380 PMINC_BACSU SEPTUM SITE-DETERMINING BACILLUS  65– PROTEIN MINCSUBTILIS 122 PMIOC_ECOLI MIOC PROTEIN ESCHERICHIA 102– COLI 129PMIP_CHLTR 27 KD MEMBRANE PROTEIN CHLAMYDIA  41– PRECURSOR TRACHOMATIS75 PMIP_LEGMI OUTER MEMBRANE PROTEIN LEGIONELLA 106– MIP PRECURSORMICDADEI 133 PMLS1_ENTFA RRNA ADENINE N-6- ENTEROCOCCUS  4– 120–METHYLTRANSFERASE FAECALIS 81 154 PMLS1_STAAU RRNA ADENINE N-6-STAPHYLOCOCCUS  9– METHYLTRANSFERASE AUREUS 47 PMLS2_ENTFA RRNA ADENINEN-6- ENTEROCOCCUS  4– 120– METHYLTRANSFERASE FAECALIS 81 154 PMLSB_BACFRRRNA ADENINE N-6- BACTEROIDES  16– METHYLTRANSFERASE FRAGILIS 43PMLSB_ECOLI RRNA ADENINE N-6- ESCHERICHIA  4– 120– METHYLTRANSFERASECOLI 81 154 PMLSB_STRTN RRNA ADENINE N-6- STREPTOCOCCUS  4– 120–METHYLTRANSFERASE PNEUMONIAE 81 154 PMLSB_STRSA RRNA ADENINE N-6-STREPTOCOCCUS  4– 120– METHYLTRANSFERASE SANGUIS 81 154 PMLSC_BACFR RRNAADENINE N-6- BACTEROIDES  16– METHYLTRANSFERASE FRAGILIS 43 PMMOB_METCMETHANE MONOOXYGENASE METHYLOCOCCUS  34– REG PROTEIN B CAPSULATUS 64PMOAB_ECOLI MOLYBD COFAC BIOSYN ESCHERICHIA  49– PROTEIN B COLI 76PMOBA_THIFE MOBA PROTEIN THIOBACILLUS  94– 251– FERROOXIDANS 121 278PMOBC_THIFE MOBC PROTEIN THIOBACILLUS  20– FERROOXIDANS 47 PMOBD_THIFEMOBD PROTEIN THIOBACILLUS  95– FERROOXIDANS 132 PMOB_ECOLI MOB PROTEINESCHERICHIA  45– COLI 72 PMOEA_ECOLI MOLYBDOPTERIN ESCHERICHIA 243–BIOSYNTHESIS COLI 270 MOEA PROTEIN PMOP1_CLOPA MOLYBDENUM-PTERINCLOSTRIDIUM  26– BINDING PASTEURIANUM 53 PROTEIN I PMOP2_CLOPAMOLYBDENUM-PTERIN CLOSTRIDIUM  26– BINDING PASTEURIANUM 64 PROTEIN IIPMOXY_PARDE METHANOL UTIL CONT PARACOCCUS 200– 307– PROTEIN MOXYDENITRIFICANS 234 334 PMPEU_SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP 2–  80– 198– PROTEIN MPEU 36 107 225 PMPEV_SYNPY BILIN BIOSYNTHESISSYNECHOCOCCUS SP  2– 175– PROTEIN MPEV 31 216 PMPRA_ECOLI MPRA PROTEINESCHERICHIA 136– COLI 163 PMRAY_BACSU PENTAPEPTIDE- BACILLUS 106– 247–TRANSFERASE SUBTILIS 133 281 PMREB_BACCE ROD SHAPE-DETERMINING BACILLUS186– PROTEIN MREB CEREUS 213 PMREC_BACSU ROD SHAPE-DETERMINING BACILLUS 65– PROTEIN MREC SUBTILIS 112 PMRKB_KLEPN CHAPERONE PROTEIN MRKBKLEBSIELLA 198– PRECURSOR PNEUMONIAE 232 PMRKC_KLEPN MRKC PROTEINPRECURSOR KLEBSIELLA  55– 452– 592– PNEUMONIAE 82 489 622 PMRKD_KLEPNFIMBRIA ADHESIN PROTEIN KLEBSIELLA 222– PRECURSOR PNEUMONIAE 268PMRKE_KLEPN MRKE PROTEIN KLEBSIELLA 193– PNEUMONIAE 220 PMRP4_STRPYFIBRINOGEN-/IG-BINDING STREPTOCOCCUS  7–  99– PROTEIN PRECURSOR PYOGENES46 310 PMRP_STRSU MURAMIDASE-RELEASED STREPTOCOCCUS  75– 130– 261– 421–507– 588– 773– 1058– PROTEIN PRECURSOR SUIS 102 177 291 448 534 622 8001085 PMSBA_ECOLI PROB ATP-BINDING ESCHERICHIA 116– 412– TRANSPORT COLI150 449 PROTEIN MSBA PMSRA_STAEP ERYTHROMYCIN RESISTANCE STAPHYLOCOCCUS174– 323– PROTEIN EPIDERMIDIS 223 350 PMSYB_ECOLI ACIDIC PROTEIN MSYBESCHERICHIA  73– COLI 100 PMT57_ECOLI MODIFICATION METHYLASE ESCHERICHIA250– 474– ECO57I COLI 284 544 PMTA1_ACICA MODIFICATION METHYLASEACINETOBACTER 503– ACCI CALCOACETICUS 540 PMTAB_SYNP2 MODIFICATIONMETHYLASE SYNECHOCOCCUS SP  19– AQUI BETA SUBUNIT 46 PMTB1_BREEPMODIFICATION METHYLASE BREVIBACTERIUM 166– 309– BEPI EPIDERMIDIS 200 336PMTB1_HERAU MODIFICATION METHYLASE HERPETOSIPHON 281– HGIBI AURANTIACUS308 PMTB2_BACAM MODIFICATION METHYLASE BACILLUS  35– BAMHIIAMYLOLIQUEFACIENS 62 PMTB3_BACAR MODIFICATION METHYLASE BACILLUS 184–BANIII ANEURINOLYTICUS 211 PMTBA_BACAR MODIFICATION METHYLASE BACILLUS121– 382– BANI ANEURINOLYTICUS 148 409 PMTBB_BACSU MODIFICATIONMETHYLASE BACILLUS 231– 467– BSUBI SUBTILIS 258 496 PMTBF_BACSUMODIFICATION METHYLASE BACILLUS 208– BSUFI SUBTILIS 235 PMTC1_CITFRMODIFICATION METHYLASE CITROBACTER  2–  55– 252– CFRB1 FREUNDII 36 82279 PMTC1_HERAU MODIFICATION METHYLASE HERPETOSIPHON 120– HGICIAURANTIACUS 147 PMTC2_HERAU MODIFICATION METHYLASE HERPETOSIPHON 281–HGICII AURANTIACUS 311 PMTE1_ECOLI MODIFICATION METHYLASE ESCHERICHIA 76– 145– ECORI COLI 110 172 PMTE1_HERAU MODIFICATION METHYLASEHERPETOSIPHON 281– HGIEI AURANTIACUS 308 PMTE2_ECOLI MODIFICATIONMETHYLASE ESCHERICHIA  4– ECORII COLI 61 PMTE5_ECOLI MODIFICATIONMETHYLASE ESCHERICHIA  73– ECO RV COLI 100 PMTEC_ENTCL MODIFICATIONMETHYLASE ENTEROBACTER 418– ECAI CLOACAE 445 PMTF1_FLAOK MODIFICATIONMETHYLASE FLAVOBACTERIUM 184– 279– 337– 398– 555– FOKI OKEANOKOITES 211306 366 425 646 PMTF1_FUSNU MODIFICATION METHYLASE FUSOBACTERIUM  22–FNUDI NUCLEATUM 49 PMTG2_HAEGA MODIFICATION METHYLASE HAEMOPHILUS 135–HGAI-2 GALLINARUM 165 PMTH2_HAEIN MODIFICATION METHYLASE HAEMOPHILUS181– 399– HINCII INFLUENZAE 208 426 PMTHZ_METTF MODIFICATION METHYLASEMETHANOBACTERIUM 188– 296– MTHZ1 THERMOFORMICICUM 215 323 PMTK1_KLEPNMODIFICATION METHYLASE KLEBSIELLA 270– KPNI PNEUMONIAE 297 PMTLD_STRMUMANNITOL-1-PHOSPHATE STREPTOCOCCUS  39– 224– 349– 5-DEHYDROGENASE MUTANS66 258 376 PMTM1_MORSP MODIFICATION METHYLASE MORAXELLA SP  5–  49– MSP139 104 PMTN3_NEILA MODIFICATION METHYLASE NEISSERIA 124– 183– NLAIIILACTAMICA 158 210 PMTP2_PROVU MODIFICATION METHYLASE PROTEUS 308– PVU IIVULGARIS 335 PMTPG_SULAC MEMBRANE-ASSOCIATED SULFOLOBUS  9– ATPASEACIDOCALDARIUS 67 PMTPS_PROST MODIFICATION METHYLASE PROVIDENCIA 226–PSTI STUARTII 264 PMTR_ECOLI TRYPTOPHAN-SPECIFIC ESCHERICHIA  80–TRANSPORT PROTEIN COLI 107 PMTS1_STRSA MODIFICATION METHYLASESTREPTOCOCCUS 116– 434– 600– STS1 SANGUIS 153 461 645 PMTS2_SHISOMODIFICATION METHYLASE SHIGELLA  81– SSOII SONNEI 108 PMTS9_STAAUMODIFICATION METHYLASE STAPHYLOCOCCUS 233– SAU96I AUREUS 274 PMTSA_LACLCMODIFICATION METHYLASE LACTOCOCCUS  88– 187– SCRFI-A LACTIS 115 214PMTSB_LACLC MODIFICATION METHYLASE LACTOCOCCUS  27– SCRFI-B LACTIS 61PMTSI_SPISQ CPG DNA METHYLASE SPIROPLASMA SP 188– 256– 230 290PMTSM_SERMA MODIFICATION METHYLASE SERRATIA  61– SMAI MARCESCENS 88PMTTB_THETH MODIFICATION METHYLASE THERMUS 120– TTHHB81 AQUATICUS 157PMTV1_VIBS3 MODIFICATION METHYLASE VIBRIO  23– VSP1 SP 66 PMUKB_ECOLIMUKB PROTEIN ESCHERICHIA 320– 1014–  1216–  COLI 381 1048 1252PMULI_ERWAM MAJOR OUTER MEMBRANE ERWINIA  24– LIPOPROTEIN PREC AMYLOVORA54 PMULI_MOLMO MAJOR OUTER MEMBRANE MORGANELA  27– LIPOPROTEIN PRECMORGANII 54 PMULI_PROMl MAJOR OUTER MEMBRANE PROTEUS  21– LIPOPROTEINPREC MIRABILIS 63 PMURD_BACSU UDP-LIGASE BACILLUS 101– 299– SUBTILIS 132326 PMURE_ECOLI LIGASE ESCHERICHIA 107– COLI 134 PMURF_ECOLI UDP-MURNAC-ESCHERICHIA 407– PENTAPEPTIDE COLI 437 SYNTHETASE PMURZ_ECOLIENOYLPYRUVATE ESCHERICHIA 392– TRANSFERASE COLI 419 PMURZ_ENTCLENOYLPYRUVATE ENTEROBACTER 392– TRANSFERASE CLOACAE 419 PMUTA_STRCMMETHYLMALONYL- STREPTOMYCES  31– COA MUTASE CINNAMONENSIS 58BETA-SUBUNIT PMUTB_PROFR METHYLMALONYL- PROPIONIBACTERIUM 549– COAMUTASE FREUDENREICHII 576 ALPHA-SUBUNIT PMUTB_SALTY /G-SPECIFIC ADENINESALMONELLA 273– GLYCOSYLASE TYPHIMURIUM 300 PMUTB_STRCM METHYLMALONYL-STREPTOMYCES 481– COA MUTASE CINNAMONENSIS 508 ALPHA-SUBUNIT PMUTL_ECOLIDNA MISMATCH ESCHERICHIA  80– REPAIR PROTEIN COLI 114 MUTL PMUTL_SALTYDNA MISMATCH SALMONELLA  80– REPAIR PROTEIN TYPHIMURIUM 114 MUTLPMUTL_VIBCH PROTEIN MUTL VIBRIO 134– CHOLERAE 169 PMUTS_ECOLI DNAMISMATCH REPAIR ESCHERICHIA 119– PROTEIN MUTS COLI 153 PMUTT_STRAMMUTT-LIKE PROTEIN STREPTOMYCES  60– AMBOFACIENS 87 PMVAA_PSEMV COENZYMEA REDUCTASE PSEUDOMONAS 341– MEVALONII 368 PMX_STRPY M-RELATED PROTEINSTREPTOCOCCUS  5– 148– 190– 240– PRECURSOR PYOGENES 129 182 217 301PMYCO_STRCI MYCOLYSIN PRECURSOR STREPTOMYCES 300– CACAOI 352 PMYFC_YERENMYFC PROTEIN PRECURSOR YERSINIA 210– ENTEROCOLITICA 237 PNADC_SALTYNICOTINATE-NUCLEOTIDE SALMONELLA 123– 255– PYROPHOSPHORYLASE TYPHIMURIUM154 289 PNADR_SALTY TRANSCRIPTIONAL SALMONELLA 233– REGULATORTYPHIMURIUM 260 NADR PNAGD_ECOLI NAGD PROTEIN ESCHERICHIA  75– COLI 102PNAGH_CLOPE HYALURONOGLUCOS- CLOSTRIDIUM  48– 990– AMINIDASE PERFRINGENS75 1017 PNAGR_ECOLI NAGR PROTEIN ESCHERICHIA 119– COLI 153 PNANH_CLOSESIALIDASE PRECURSOR CLOSTRIDIUM  11– 289– 922– SEPTICUM 42 330 988PNANH_CLOSO SIALIDASE PRECURSOR CLOSTRIDIUM 377– SORDELLII 404PNANH_SALTY SIALIDASE SALMONELLA 290– TYPHIMURIUM 317 PNAPA_ENTHRNA(+)/H(+) ENTEROCOCCUS 116– ANTIPORTER HIRAE 150 PNARG_ECOLIRESPIRATORY NITRATE ESCHERICHIA 386– REDUCTASE ALPHA CHAIN COLI 420PNARL_ECOLI REGULATOR PROTEIN NARL ESCHERICHIA  76– COLI 103 PNARP_ECOLIREGULATOR PROTEIN NARP ESCHERICHIA 155– COLI 189 PNARX_ECOLINITRATE/NITRITE SENSOR ESCHERICHIA 220– 358– 431– 505– PROTEIN NARX COLI247 385 458 538 PNDVA_RHIME BETA-(1 −> 2)GLUCAN RHIZOBIUM 212– EXPORTPROTEIN MELILOTI 239 PNEOR_STRCY NEOMYCIN RESISTANCE STREPTOMYCES 348–PROTEIN CYANOGENUS 375 PNEUA_ECOLI ACYLNEURAMINATE ESCHERICHIA 218– 268–CYTIDYLYLTRANSFERASE COLI 252 298 PNFRA_ECOLI N4 ADSORPTION PROTEIN AESCHERICHIA 490– PRECURSOR COLI 517 PNFRB_ECOLI N4 ADSORPTION PROTEIN BESCHERICHIA  2– 186– 511– COLI 43 220 538 PNFRC_ECOLI N4 ADSORPTIONPROTEIN C ESCHERICHIA 315– COLI 342 PNFS1_ENTCL NAD(P)H NITROREDUCTASEENTEROBACTER  9– CLOACAE 36 PNHAA_ECOLI NA(+)/H(+) ESCHERICHIA 206–ANTIPORTER 1 COLI 233 PNHAB_ECOLI NA(+)/H(+) ESCHERICHIA 271– ANTIPORTER2 COLI 305 PNHAB_PSECL NITRILE HYDRATASE PSEUDOMONAS  71– SUBUNIT BETACHLORORAPHIS 101 PNHB1_RHORH NITRILE HYDRATASE RHODOCOCCUS  63– SUBUNITBETA RHODOCHROUS 93 PNIFA_AZOBR NIF-SPECIFIC REGULATORY AZOSPIRILLUM  7–PROTEIN BRASILENSE 44 PNIFA_BRAJA NIF-SPECIFIC REGULATORY BRADYRHIZOBIUM252– PROTEIN JAPONICUM 279 PNIFA_HERSE NIF-SPECIFIC REGULATORYHERBASPIRILLUM  9– 162– 327– PROTEIN SEROPEDICAE 51 203 354 PNIFA_RHILENIF-SPECIFIC REGULATORY RHIZOBIUM 100– PROTEIN LEGUMINOSARUM 127PNIFA_RHIME NIF-SPECIFIC REGULATORY RHIZOBIUM 171– PROTEIN MELILOTI 198PNIFA_RHOCA NIF-SPECIFIC REGULATORY RHODOBACTER 260– PROTEIN CAPSULATUS287 PNIFB_AZOV1 NIFB PROTEIN AZOTOBACTER 342– VINELANDII 369 PNIFB_KLEPNNIFB PROTEIN KLEBSIELLA 154– PNEUMONIAE 181 PNIFD_ANASP NITROGMOLYBD-IRON ANABAENA SP 374– PROTEIN 401 PNIFD_AZOBR NITROG MOLYBD-IRONAZOSPIRILLUM 377– PROTEIN BRASILENSE 404 PNIFD_PLEBO NITROG MOLYBD-IRONPLECTONEMA 387– PROTEIN BORYANUM 414 PNIFD_THIFE NITROG MOLYBD-IRONTHIOBACILLUS 383– PROTEIN FERROOXIDANS 410 PNIFE_CLOPA BIOSYNTHESISPROTEIN CLOSTRIDIUM 359– NIFE PASTEURIANUM 386 PNIFH_FRASR NITROGENASEIRON FRANKIA SP  56– PROTEIN 83 PNIFH_PLEBO NITROGENASE IRON PLECTONEMA267– PROTEIN BORYANUM 294 PNIFK_AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM430– PROTEIN BRASILENSE 457 PNIFK_BRAJA NITROG MOLYBD-IRONBRADYRHIZOBIUM 483– PROTEIN JAPONICUM 510 PNIFK_BRASP NITROG MOLYBD-IRONBRADYRHIZOBIUM SP 478– PROTEIN 505 PNIFK_CLOPA NITROG MOLYBD-IRONCLOSTRIDIUM 227– PROTEIN PASTEURIANUM 254 PNIFK_THIFE NITROG MOLYBD-IRONTHIOBACILLUS 479– PROTEIN FERROOXIDANS 506 PNIFM_AZOCH NIFM PROTEINAZOTOBACTER 265– CHROOCOCCUM MCD 1 292 PNIFN_BRAJA BIOSYNTHESIS PROTEINBRADYRHIZOBIUM 339– NIFN JAPONICUM 366 PNIFS_ANASP NIFS PROTEIN ANABAENASP 112– 139 PNIFS_LACDE NIFS PROTEIN HOMOLOG LACTOBACILLUS  59–DELBRUECKII 86 PNIFT_AZOV1 NIFT PROTEIN AZOTOBACTER  6– VINELANDII 33PNIFU_ANASL NIFU PROTEIN ANABAENA SP  7– 49 PNIFU_ANASP NIFU PROTEINANABAENA SP 148– 178 PNIFU_KLEPN NIFU PROTEIN KLEBSIELLA  66– PNEUMONIAE93 PNIKA_ECOLI NICKEL TRANSPORT PROTEIN ESCHERICHIA 122– 282– 456– NIKAPRECURSOR COLI 149 309 483 PNIKE_ECOLI NICKEL TRANSPORT PROTEINESCHERICHIA 177– NIKE COLI 204 PNIRB_ECOLI NITRITE REDUCTASE ESCHERICHIA 54– 345– COLI 81 372 PNIRC_ECOLI NIRC PROTEIN ESCHERICHIA 212– COLI 239PNIRS_PSEST PSEUDOMONAS CYTOCHROME PSEUDOMONAS 303– OXIDASE PRECURSOSTUTZERI 333 PNISB_LACLA 117 KD MEMBRANE LACTOCOCCUS 202– 287– 663– 886–ASSOCIATED LACTIS 229 332 697 920 PROTEIN PNISC_LACLA NISIN BIOSYNTHESISLACTOCOCCUS  52– 140– PROTEIN NISC LACTIS 92 188 PNIST_LACLA NISINTRANSPORT PROTEIN LACTOCOCCUS 223– 278– 426– NIST LACTIS 257 305 470PNIVA_CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM 100– 234– ALPHA SUBUNITPASTEURIANUM 127 268 PNIVO_CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM  63–103– 213– 283– OMEGA SUBUNIT PASTEURIANUM 94 132 240 310 PNMPC_ECOLIPORIN PROTEIN NMPC ESCHERICHIA  22–  69– 335– PRECURSOR COLI 49 96 362PNODC_BRASP NODULATION PROTEIN C BRADYRHIZOBIUM SP  3– 30 PNODC_RHILONODULATION PROTEIN C RHIZOBIUM 286– LOTI 313 PNODC_RHILT NODULATIONPROTEIN C RHIZOBIUM  14– LEGUMINOSARUM 48 PNODF_RHILV NODULATION PROTEINF RHIZOBIUM  31– LEGUMINOSARUM 58 PNODF_RHIMS NODULATION PROTEIN FRHIZOBIUM  39– MELILOTI 66 PNODG_RHIME NODULATION PROTEIN G RHIZOBIUM 8– MELILOTI 35 PNODG_RHIMS NODULATION PROTEIN G RHIZOBIUM  8– MELILOTI35 PNODL_RHILV NODULATION PROTEIN L RHIZOBIUM  26– LEGUMINOSARUM 53PNODQ_ABOBR NODULATION PROTEIN Q AZOSPIRILLUM  60– BRASILENSE 87PNODT_RHILT NODULATION PROTEIN T RHIZOBIUM 104– 355– 420– LEGUMINOSARUM134 382 454 PNODT_RHILV NODULATION PROTEIN T RHIZOBIUM 364– 416–LEGUMINOSARUM 391 443 PNODU_RHIFR NODULATION PROTEIN U RHIZOBIUM 506–FREDII 536 PNODV_BRAJA NODULATION PROTEIN V BRADYRHIZOBIUM 378– 739–JAPONICUM 419 766 PNODX_RHILV NODULATION PROTEIN X RHIZOBIUM 232–LEGUMINOSARUM 259 PNOLB_RHIFR NODULATION PROTEIN NOLB RHIZOBIUM 133–FREDII 160 PNOLR_RHIME NODULATION PROTEIN NOLR RHIZOBIUM  88– MELILOTI115 PNOSD_PSEST NOSD PROTEIN PRECURSOR PSEUDOMONAS 319– STUTZERI 346PNOSR_PSEST REGULATORY PROTEIN NOSR PSEUDOMONAS 127– STUTZERI 154PNOSZ_PSEAE NITROUS-OXIDE REDUCTASE PSEUDOMONAS 267– PRECURSORAERUGINOSA 294 PNOSZ_PSEST NITROUS-OXIDE REDUCTASE PSEUDOMONAS 557–PRECURSOR STUTZERI 591 PNPRE_BACAM BACILLOLYSIN PRECURSOR BACILLUS 113–217– AMYLOLIQUEFACIENS 147 244 PNPRE_BACPO BACILLOLYSIN PRECURSORBACILLUS  57– 187– POLYMYXA 91 228 PNPRE_BACSU BACILLOLYSIN PRECURSORBACILLUS 116– 307– SUBTILIS 146 334 PNQO5_PARDE NADH-UBIQUINONEPARACOCCUS  4– OXIDOREDUCTASE DENITRIFICANS 45 21 KD CHAI PNQO9_PARDENADH-UBIQUINONE PARACOCCUS 125– OXIDOREDUC DENITRIFICANS 152 20 KD CHAINPNRDD_ECOLI ANAER RIBONUC-TRIPHOS ESCHERICHIA  91– REDUCTASE COLI 125PNRFA_ECOLI CYTOCHROME C552 ESCHERICHIA 319– PRECURSOR COLI 346PNRFG_ECOLI NRFG PROTEIN ESCHERICHIA  72– COLI 111 PNRL1_RHORH ALIPHATICNITRILASE RHODOCOCCUS 109– RHODOCHROUS 136 PNSR_LACLA NISIN-RESISTANCELACTOCOCCUS  52– 135– PROTEIN LACTIS 79 162 PNTCA_ANASP DNA-BINDINGPROTEIN VF1 ANABAENA SP  65– 92 PNTCA_SYNP7 GLOBAL NITROGENSYNECHOCOCCUS SP  44– REGULATOR 91 PNTCA_SYNY3 GLOBAL NITROGENSYNECHOCYSTIS SP  67– REGULATOR 94 PNTRB_VIBAL NITROGEN REGULATIONVIBRIO 194– PROTEIN NTRB ALGINOLYTICUS 223 PNTRC_PRUVU NITROGENREGULATION PROTEUS 385– PROTEIN NR VULGARIS 412 PNTRC_RHIME NITROGENASSIMILATION RHIZOBIUM 451– REGULATORY PROTEIN MELILOTI 478 PNU2C_SYNP7NADH-PLASTOQUINONE SYNECHOCOCCUS SP  80– OXIDOREDUCTASE CHAIN 107PNU4C_SYNY3 NADH-PLASTOQUINONE SYNECHOCYSTIS SP  27– OXIDOREDUCTASECHAIN 54 PNU5C_SYNP2 NADH-PLASTOQUINONE SYNECHOCOCCUS SP 614–OXIDOREDUCTASE CHAIN 641 PNUIC_SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTISSP 163– OXIDOREDUCTASE SUBU 190 PNUKC_SYNY3 PROS NADH-UBIQUINONESYNECHOCYSTIS SP 169– OXIDOREDUCTASE SUBU 199 PNULX_SYNY3NADH-PLASTOQUINONE SYNECHOCYSTIS SP  46– OXIDOREDUCTASE CHAIN 80PNUOG_ECOLI NADH DEHYDROGENASE I ESCHERICHIA 368– CHAIN G COLI 402PNUOL_ECOLI NADH DEHYDROGENASE I ESCHERICHIA  30– 496– CHAIN L COLI 57523 PNUON_ECOLI NADH DEHYDROGENASE I ESCHERICHIA 392– CHAIN N COLI 419PNUPC_ECOLI NUCLEOTIDE PERMEASE ESCHERICHIA  13– 134– 356– COLI 43 164383 PNUSA_ECOLI NUSA PROTEIN ESCHERICHIA  21– COLI 62 PNUSB_ECOLI NUTILIZATION SUBSTANCE ESCHERICHIA  17–  70– PROTEIN B COLI 65 97PNUSG_ECOLI TRANSCRIPTION ESCHERICHIA 141– ANTITERMINATION COLI 168PROTEIN NUS PNUSG_THEMA TRANSCRIPTION THERMOTOGA 203– ANTITERMINATIONMARITIMA 230 PROTEIN NUS PNYLB_FLASP 6-AMINOHEXANOATE-DIMERFLAVOBACTERIUM SP 223– HYDROLASE 250 PNYLC_FLASP 6-AMINOHEXANOATE-DIMERFLAVOBACTERIUM SP 223– HYDROLASE 250 POI6G_BACCE OLIGO-1,6-GLUCOSIDASEBACILLUS 301– CEREUS 328 POCCT_AGRT6 OCTOPINE-BINDING AGROBACTERIUM 172–PROTEIN TUMEFACIENS 202 T PRECURSOR PODO1_AZOV1 2-OXOGLUTARATEAZOTOBACTER 829– DEHYDROGENASE E1 VINELANDII 856 COMPONE PODO1_BACSU2-OXOGLUTARATE BACILLUS 487– 809– DEHYDROGENASE E1 SUBTILIS 524 850COMPONE PODO1_ECOLI 2-OXOGLUTARATE ESCHERICHIA  6– DEHYDROGENASE E1 COLI33 COMPONE PODO2_BACSU DIHYDROLIPOAMIDE SUC- BACILLUS  30– TRANSF COMPSUBTILIS 60 PODOB_PSEPU 2-OXOGLUTARATE PSEUDOMONAS 223– DEHYDROGENASE E1PUTIDA 254 COMPONE PODP1_ECOLI PYRUVATE DEHYDROGENASE ESCHERICHIA 624–E1 COMPONENT COLI 651 PODP2_AZOV1 DIHYDROLIPOAMIDE AZOTOBACTER 518–ACETRANS COMP VINELANDII 545 PODP2_ECOLI DIHYDROLIPOAMIDE ESCHERICHIA 14– 117– ACETRANS COMP COLI 41 144 PODPA_BACST PYRUVATE DEHYDROGENASEBACILLUS 299– E1 COMPONENT STEAROTHERMOPHILUS 333 PODPA_BACSU PYRUVATEDEHYDROGENASE BACILLUS 305– E1 COMPONENT SUBTILIS 332 PODPB_BACSTPYRUVATE DEHYDROGENASE BACILLUS  23– E1 COMPONENT STEAROTHERMOPHILUS 50PODPB_BACSU PYRUVATE BACILLUS  16– DEHYDROGENASE E1 SUBTILIS 50COMPONENT POMIE_CHLTR 15 KD CYSTEINE-RICH CHLAMYDIA  38– PROTEIN,SEROVAR E TRACHOMATIS 65 POMA1_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA 63– PI A PRECURSOR GONORRHOEAE 90 POMA1_NEIME OUTER MEMBRANE PROTEINNEISSERIA 359– PI A PRECURSOR MENINGITIDIS 386 POMA2_NEIME OUTERMEMBRANE PROTEIN NEISSERIA 353– PI A PRECURSOR MENINGITIDIS 380POMB1_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA  63– P.IB PRECURSORGONORRHOEAE 90 POMB1_NEIME OUTER MEMBRANE PROTEIN NEISSERIA  63– P.IBPRECURSOR MENINGITIDIS 90 POMB2_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA 63– P.IB PRECURSOR GONORRHOEAE 90 POMB2_NEIME OUTER MEMBRANE PROTEINNEISSERIA  63– P.IB PRECURSOR MENINGITIDIS 90 POMB3_NEIME OUTER MEMBRANEPROTEIN NEISSERIA  63– P.IB PRECURSOR MENINGITIDIS 90 POMB4_NEIME OUTERMEMBRANE PROTEIN NEISSERIA  24–  63– P.IB PRECURSOR MENINGITIDIS 51 90POMB_NEILA OUTER MEMBRANE PROTEIN NEISSERIA 116– P.IB PRECURSORLACTAMICA 143 POMB_NEISI OUTER MEMBRANE PROTEIN NEISSERIA  24–  63– P.IBPRECURSOR SICCA 51 90 POMLA_ACTPL OUTER MEMBRANE ACTINOBACILLUS 114–LIPOPROTEIN PRECURSOR PLEUROPNEUMONIAE 151 POMP1_HAEIN OUTER MEMBRANEPROTEIN HAEMOPHILUS 154– 303– 341– PI PRECURSOR INFLUENZAE 184 330 368POMP2_HAEIN OUTER MEMBRANE PROTEIN HAEMOPHILUS  16– 220– 326– P2PRECURSOR INFLUENZAE 71 254 353 POMP3_NEIGO OUTER MEMBRANE PROTEINNEISSERIA  14– P.IB PRECURSOR GONORRHOEAE 41 POMP7_STAAU 70 KD OUTERMEMBRANE STAPHYLOCOCCUS  53–  88– PROTEIN PRECURSOR AUREUS 80 115POMPA_THEMA OUTER MEMBRANE PROTEIN THERMOTOGA 100– 151– 183– 255– 301–351– ALPHA PRECURSOR MARITIMA 138 178 249 292 328 385 POMPC_ECOLI OUTERMEMBRANE PROTEIN ESCHERICHIA  20– 64– C PRECURSOR COLI 47 94 POMPC_NEIGOOUTER MEMBRANE PROTEIN NEISSERIA  89– P.IIC PRECURSOR GONORRHOEAE 123POMPC_SALTI OUTER MEMBRANE PROTEIN SALMONELLA 166– C PRECURSOR TYPHI 193POMPF_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA  21– 231– F PRECURSORCOLI 55 258 POMPH_PHOS9 OMPH PROTEIN PHOTOBACTERIUM SP 292– 319POMPT_ECOLI PROTEASE VII PRECURSOR ESCHERICHIA  37– COLI 64 POP65_NEIGOOPACITY PROTEIN OPA65 NEISSERIA  71– GONORRHOEAE 111 POP67_NEIGO OPACITYPROTEIN OPA67 NEISSERIA  72– GONORRHOEAE 109 POPAA_NEIGO OPACITY PROTEINOPA53 NEISSERIA  71– 140– GONORRHOEAE 123 167 POPAG_NEIGO OPACITYPROTEIN OPA52 NEISSERIA  80– 140– GONORRHOEAE 107 167 POPAI_NEIGOOPACITY PROTEIN OPA54 NEISSERIA  80– GONORRHOEAE 107 POPAJ_NEIGO OPACITYPROTEIN OPA58 NEISSERIA  71– GONORRHOEAE 105 POPAK_NEIGO OPACITY PROTEINOPA57 NEISSERIA  71– GONORRHOEAE 105 POPDA_ECOLI OLIGOPEPTIDASE AESCHERICHIA 147– COLI 174 POPDA_SALTY OLIGOPEPTIDASE A SALMONELLA 147–TYPHIMURIUM 174 POPDE_PSEAE TRANSCRIPTION FACTOR PSEUDOMONAS  64– OPDEAERUGINOSA 91 POPPA_ECOLI OLIGOPEPTIDE-BINDING ESCHERICHIA 402– PROTEINPRECURSOR COLI 432 POPPD_SALTY OLIGOPEPTIDE PERMEASE SALMONELLA 265–PROTEIN OPPB TYPHIMURIUM 299 POPR1_NEIME OPACITY-RELATED PROTEINNEISSERIA 108– POPM1 MENINGITIDIS 135 POPR3_NEIME OPACITY-RELATEDPROTEIN NEISSERIA  94– POPM3 MENINGITIDIS 135 POSMC_ECOLI OSMOTICALLYINDUCIBLE ESCHERICHIA  5– PROTEIN OSMC COLI 32 POSPA_BORBU OUTER SURFACEPROTEIN BORRELIA  63– 112– 157– 223– A PRECURSOR BURGDORFERI 100 139 204271 POSPB_BORBU OUTER SURFACE PROTEIN BORRELIA 113– 262– B PRECURSORBURGDORFERI 259 296 POTC2_BACSU ORNITHINE BACILLUS 188–CARBAMOYLTRANSFERASE SUBTILIS 215 POTCC_PSEPU ORNITHINE PSEUDOMONAS  17–CARBAMOYLTRANSFERASE AERUGINOSA 44 POTCC_PSEAE ORNITHINE PSEUDOMONAS  3–CARBAMOYLTRANSFERASE PUTIDA 33 POUTB_BACSU SPORE OUTGROWTH FACTORBACILLUS 225– B SUBTILIS 252 POUTO_ERWCA LEADER PEPTIDASE ERWINIA 189–CAROTOVORA 216 PP18K_STRPA 18 KD PROTEIN IN STREPTOCOCCUS 115– FIMA3′REGION PARASANGUIS 149 PP18K_STRSA 18 KD PROTEIN IN STREPTOCOCCUS  10–114– SSAB 3′REGION SANGUIS 37 148 PP1P_LACLC PI-TYPE PROTEINASELACTOCOCCUS 107– 904– 1073– 1223– 1466– 1625– PRECURSOR LACTIS 155 9501100 1250 1496 1655 PP29_MYCHR PROTEIN P29 MYCOPLASMA 5– 101– 202–HYORHINIS 56 160 246 PP2P_LACLA PII-TYPE PROTEINASE LACTOCOCCUS 107–904– 1073– 1223– 1446– 1625– PRECURSOR LACTIS 155 950 1100 1250 14961689 PP2P_LACPA PII-TYPE PROTEINASE LACTOBACILLUS 107– 904– 1073– 1223–1446– 1628– PRECURSOR PARACASEI 155 941 1100 1250 1496 1655 PP30_ECOLIP30 PROTEIN ESCHERICHIA  55– COLI 82 PP34_RICRI PROTEIN P34 RICKETTSIA 9– 135– RICKETTSII 47 173 PP37_MYCHR PROTEIN P37 PRECURSOR MYCOPLASMA 38– HYORHINIS 75 PP3P_LACLC PIII-TYPE PROTEINASE LACTOCOCCUS 107– 904–1073– 1223– 1446– 1628– PRECURSOR LACTIS 155 950 1100 1250 1496 1655PP47K_PSECL 47 KD PROTEIN PSEUDOMONAS 288– CHLORORAPHIS 315 PP54_ENTFCP54 PROTEIN PRECURSOR ENTEROCOCCUS  58– 141– FAECIUM 92 209 PP60_LISGRPROTEIN P60 PRECURSOR LISTERIA  31– 101– 300– 431– GRAYI 61 142 334 458PP60_LISIN PROTEIN P60 PRECURSOR LISTERIA  67– 102– INNOCUA 94 143PP60_LISIV PROTEIN P60 PRECURSOR LISTERIA 101– 315– IVANOVII 140 359PP60_LISMO PROTEIN P60 PRECURSOR LISTERIA 103– MONOCYTOGENES 144PP60_LISSE PROTEIN P60 PRECURSOR LISTERIA 101– 270– 321– 395– SEELIGERI140 298 365 422 PP60_LISWE PROTEIN P60 PRECURSOR LISTERIA 113– 317– 396–WELSHIMERI 140 361 4– 23 PP69_MYCHR PROTEIN P69 MYCOPLASMA 264– 421–487– 544– HYORHINIS 295 464 517 575 PPABA_BACSU ADC SYNTHASE BACILLUS 12– SUBTILIS 41 PPABC_BACSU 4-AMINO-4-DEOXYCHORISMATE BACILLUS 250–LYASE SUBTILIS 277 PPABC_ECOLI 4-AMINO-4-DEOXYCHORISMATE ESCHERICHIA140– LYASE COLI 167 PPABL_STRGR PROTEIN Y STREPTOMYCES  52– GRISEUS 79PPAC_ARTV1 PENICILLIN ACYLASE ARTHROBACTER 170– 333– 571– 640– PRECURSORVISCOSUS 197 363 606 674 PPAC_BACSH PENICILLIN ACYLASE BACILLUS 232–SPHAERICUS 259 PPAC_STRMU PAC PROTEIN PRECURSOR STREPTOCOCCUS 146– 281–538– 576– 1075– 1159– 1381– MUTANS 276 465 565 630 1102 1186 1434PPA11_BACSU REGULATORY PROTEIN BACILLUS 103– PAI 1 SUBTILIS 137PPA12_BACSU REGULATORY PROTEIN BACILLUS 145– PAI 2 SUBTILIS 172PPAPE_ECOLI FIMBRIAL PROTEIN ESCHERICHIA  42– 86– PAPE COLI 69 123PPAPF_ECOLI MINOR FIMBRIAL PROTEIN ESCHERICHIA  4– PAPF COLI 31PPAPG_ECOLI FIMBRIAL PROTEIN PAPG ESCHERICHIA 282– PRECURSOR COLI 316PPARA_AGRTU PARA PROTEIN AGROBACTERIUM  60– TUMEFACIENS 87 PPARB_ECOLIPLASMID PARTITION ESCHERICHIA 117– 249– PAR B PROTEIN COLI 154 283PPARE_ECOLI TOPOISOMERASE IV ESCHERICHIA 444– 526– SUBUNIT B COLI 471553 PPARE_SALTY TOPOISOMERASE IV SALMONELLA 444– 526– SUBUNIT BTYPHIMURIUM 471 553 PPA_BACAM PROTECTIVE ANTIGEN BACILLUS  13– 125– 296–585– 650– PRECURSOR ANTHRACIS 52 152 335 615 684 PPBP2_ECOLIPENICILLIN-BINDING ESCHERICHIA  95– 178– 207– PROTEIN 2 COLI 122 205 241PPBP2_NEIGO PENICILLIN-BINDING NEISSERIA 193– PROTEIN 2 GONORRHOEAE 220PPBP2_NEIME PENICILLIN-BINDING NEISSERIA 193– PROTEIN 2 MENINGITIDIS 220PPBP2_STRPN PENICILLIN-BINDING STREPTOCOCCUS 144– 216– 259– 605– PROTEIN2B PNEUMONIAE 183 243 286 632 PPBP3_ECOLI PENICILLIN-BINDING ESCHERICHIA224– 334– PROTEIN 3 PRECURSOR COLI 251 368 PPBP4_BACSUPENICILLIN-BINDING BACILLUS 374– PROTEIN 4* SUBTILIS 401 PPBP4_ECOLIPENICILLIN-BINDING ESCHERICHIA 336– PROTEIN 4 PRECURSOR COLI 363PPBPA_ECOLI PENICILLIN-BINDING ESCHERICHIA 145– PROTEIN 1A COLI 172PPBPB_ECOLI PENICILLIN-BINDING ESCHERICHIA  62– 263– PROTEIN IB COLI 96290 PPBPX_STRPN PENICILLIN-BINDING STREPTOCOCCUS  89– 706– PROTEIN 2XPNEUMONIAE 116 733 PPBP_STAAU PENICILLIN-BINDING STAPHYLOCOCCUS  78–176– 263– 502– PROTEIN AUREUS 108 203 324 529 PPCAB_PSEPU CYCLOISOMERASEPSEUDOMONAS 115– 226– PUTIDA 142 253 PPEL3_ERWCA PECTATE LYASE IIIERWINIA 110– PRECURSOR CAROTOVORA 137 PPELA_ERWCA PECTATE LYASE AERWINIA 110– PRECURSOR CAROTOVORA 137 PPELB_ERWCA PECTATE LYASE BERWINIA 110– PRECURSOR CAROTOVORA 137 PPELC_ERWCA PECTATE LYASE CERWINIA 110– PRECURSOR CAROTOVORA 137 PPELF_ERWCH PECTATE LYASE EERWINIA  40– 209– PRECURSOR CHRYSANTHEMI 67 243 PPELP_ERWCA PERIPLASMICPECTATE ERWINIA 455– LYASE PRECURSOR CAROTOVORA 482 PPELP_YERPSPERIPLASMIC PECTATE YERSINIA 459– LYASE PRECURSOR PSEUDOTUBERCULOSIS 489PPELX_ERWCA PUTATIVE PECTATE ERWINIA 188– LYASE X PRECURSOR CAROTOVORA218 PPELX_ERWCH EXOPOLYGALACTURONATE ERWINIA 466– LYASE PRECURSORCHRYSANTHEMI 493 PPEPD_ECOLI AMINOACYL-HISTIDINE ESCHERICHIA 264–DIPEPTIDASE COLI 314 PPEPQ_ECOLI X-PRO DIPEPTIDASE ESCHERICHIA 251– COLI278 PPERT_BORBR PERTACTIN PRECURSOR BORDETELLA 617– BRONCHISEPTICA 644PPERT_BORPA PERTACTIN PRECURSOR BORDETELLA 628– PARAPERTUSSIS 655PPERT_BORPE PERTACTIN PRECURSOR BORDETELLA 616– PERTUSSIS 643 PPGK_CORGLPHOSPHOGLYCERATE CORYNEBACTERIUM  83– KINASE GLUTMICUM 117 PPGK_ECOLIPHOSPHOGLYCERATE ESCHERICHIA 186– KINASE COLI 216 PPGK_METBRPHOSPHOGLYCERATE METHANOBACTERIUM  36– KINASE BRYANTII 63 PPGK_THETHPHOSPHOGLYCERATE THERMUS 222– KINASE AQUATICUS 249 PPGL1_ERWCAENDO-POLYGALACTURONASE ERWINIA 237– PRECURSOR CAROTOVORA 271 PPGTE_SALTYOUTER MEMBRANE PROTEASE SALMONELLA  66– E PRECURSOR TYPHIMURIUM 93PPHA1_FREDI C-PHYCOCYANIN-1 ALPHA FREMYELLA  21– CHAIN DIPLOSIPHON 48PPHA2_FREDI C-PHYCOCYANIN-2 ALPHA FREMYELLA  21– CHAIN DIPLOSIPHON 48PPHAA_PSEOL POLY(3-HYDROXYALKANOATE) PSEUDOMONAS 264– POLYMERASE 1OLEOVORANS 291 PPHAB_ANACY ALLOPHYCOCYANIN BETA ANABAENA  7– CHAINCYLINDRICA 48 PPHAB_ANAVA ALLOPHYCOCYANIN BETA ANABAENA  14– CHAINVARIABILIS 48 PPHAB_FREDI ALLOPHYCOCYANIN BETA FREMYELLA  8– CHAINDIPLOSIPHON 49 PPHAB_MASLA ALLOPHYCOCYANIN BETA MASTIGOCLADUS  14– CHAINLAMINOSUS 41 PPHAB_SYNP6 ALLOPHYCOCYANIN BETA SYNECHOCOCCUS SP  14–CHAIN 41 PPHAC_SYNP6 ALLOPHYCOCYANIN ALPHA-B SYNECHOCOCCUS SP  33– CHAIN60 PPHAG_FREDI ALLOPHYCOCYANIN GAMMA FREMYELLA  32– CHAIN DIPLOSIPHON 59PPHB3_FREDI C-PHYCOCYANIN-3 BETA FREMYELLA  29– CHAIN DIPLOSIPHON 56PPHBB_ALCEU ACETOACETYL-COA REDUCTASE ALCALIGENES  55– EUTROPHUS 85PPHCA_SYNY1 C-PHYCOCYANIN ALPHA CHAIN SYNECHOCYSTIS SP  21– 55PPHCB_SYNP6 C-PHYCOCYANIN BETA CHAIN SYNECHOCOCCUS SP  28– 55PPHCB_SYNP7 C-PHYCOCYANIN BETA CHAIN SYNECHOCOCCUS SP  28– 55PPHCB_SYNY1 C-PHYCOCYANIN BETA CHAIN SYNECHOCYSTIS SP  21– 55PPHEA_ECOLI CHORISMATE MUTASE ESCHERICHIA  10– COLI 37 PPHEA_ERWHECHORISMATE MUTASE ERWINIA  10– 159– 252– HERBICOLA 37 186 286PPHEA_PSESP PHENOL 2-MONOOXYGENASE PSEUDOMONAS SP 171– 282– 437– 201 314464 PPHEB_MASLA PHYCOERYTHROCYANIN BETA MASTIGOCLADUS  21– CHAINLAMINOSUS 62 PPHEB_PSESP CATECHOL 1,2-DIOXYGENASE PSEUDOMONAS SP  24– 51PPHEG_SYNPY LINKER POLYPEPTIDE SYNECHOCOCCUS SP 158– 185 PPHEP_ECOLIPHENYLALANINE-SPECIFIC ESCHERICHIA 284– PERMEASE COLI 311 PPHF1_CLOPAPERIPLASMIC [FE] CLOSTRIDIUM 434– HYDROGENASE 1 PASTEURIANUM 471PPHL1_BACCE SPHINGOMYELINASE C BACILLUS  2– PRECURSOR CEREUS 36PPHL2_BACCE SPHINGOMYELINASE C BACILLUS  2– PRECURSOR CEREUS 36PPHL3_BACCE SPHINGOMYELINASE C BACILLUS  2– PRECURSOR CEREUS 36PPHLC_BACCE PHOSPHOLIPASE C PRECURSOR BACILLUS  32– 179– CEREUS 59 206PPHLC_CLOBI PHOSPHOLIPASE C PRECURSOR CLOSTRIDIUM  50– 335– BIFERMENTANS77 365 PPHLC_CLOPE PHOSPHOLIPASE C PRECURSOR CLOSTRIDIUM 210– 369–PERFRINGENS 237 398 PPHLC_LISMO PHOSPHOLIPASE C PRECURSOR LISTERIA 147–MONOCYTOGENES 174 PPHLC_PSEAE HEMOLYTIC PHOSPHOLIPASE C PSEUDOMONAS 685–PRECURSOR AERUGINOSA 712 PPHLC_STAAU PHOSPHOLIPASE C PRECURSORSTAPHYLOCOCCUS  6– AUREUS 33 PPHLD_BACCE PHOSPHOLIPASE C PRECURSORBACILLUS 179– CEREUS 206 PPHL_LEPIN SPHINGOMYELINASE C LEPTOSPIRA 30–394– PRECURSOR INTERROGANS 57 428 PPHND_ECOLI PHND PROTEIN ESCHERICHIA296– COLI 326 PPHNK_ECOLI PHNK PROTEIN ESCHERICHIA 178– COLI 205PPHNM_ECOLI PHNM PROTEIN ESCHERICHIA  5– COLI 35 PPHOE_CITFR OUTERMEMBRANE PORE CITROBACTER  13– 47– PROTEIN E PRECURSOR FREUNDII 40 105PPHOE_ECOLI OUTER MEMBRANE PORE ESCHERICHIA  13– 64– 168– 226– PROTEIN EPRECURSOR COLI 40 105 195 253 PPHOE_KLEOX OUTER MEMBRANE PORE KLEBSIELLA 13– 64– PROTEIN E PRECURSOR OXYTOCA 40 91 PPHOE_KLEPN OUTER MEMBRANEPORE KLEBSIELLA  13– 64– PROTEIN E PRECURSOR PNEUMONIAE 40 105PPHOE_SALTY OUTER MEMBRANE PORE SALMONELLA  63– 320– PROTEIN E PRECURSORTYPHIMURIUM 104 347 PPHOP_BACSU ALK PHOS SYNTHESIS BACILLUS 185– TRANSREG PROTEIN SUBTILIS 219 PPHOQ_ECOLI SENSOR PROTEIN PHOQ ESCHERICHIA244– COLI 278 PPHOQ_SALTY VIRULENCE SENSOR PROTEIN SALMONELLA 226– PHOQTYPHIMURIUM 260 PPHOR_BACSU ALK PHOS SYNTHESIS SENSOR BACILLUS  89– 387–PROTEIN PHOR SUBTILIS 145 425 PPHRA_ECOLI PHOTOREPAIR PROTEIN PHRAESCHERICHIA  63– 207– COLI 90 241 PPHRA_SYNPY R-PHYCOCYANIN II ALPHASYNECHOCOCCUS SP  20– CHAIN 47 PPHRA_SYNPZ R-PHYCOCYANIN II ALPHASYNECHOCOCCUS SP  20– CHAIN 47 PPHSG_ECOLI GLYCOGEN PHOSPHORYLASEESCHERICHIA 157– 488– COLI 184 515 PPHSM_ECOLI MALTODEXTRINPHOSPHORYLASE ESCHERICHIA  71– COLI 108 PPILA_NEIGO PROB SIGNALRECOGNITION NEISSERIA  17– PARTICLE PROTEIN GONORRHOEAE 68 PPILB_PSEAEFIMBRIAL ASSEMBLY PSEUDOMONAS  16– PROTEIN PILB AERUGINOSA 60PPILC_PSEAE PILC PROTEIN PSEUDOMONAS 143– AERUGINOSA 170 PPILD_NEIGOLEADER PEPTIDASE NEISSERIA 110– GONORRHOEAE 137 PPILO_PSEAE FIMBRIALASSEMBLY PROTEIN PSEUDOMONAS  71– 639– PILQ PRECURSOR AERUGINOSA 115 666PPILS_PSEAE SENSOR PROTEIN PILS PSEUDOMONAS  9– AERUGINOSA 46 PPIR_ECOLIPI PROTEIN ESCHERICHIA 156– COLI 188 PPIV_MORBO PILIN GENE INVERTINGMORAXELLA  42– 152– PROTEIN BOVIS 69 182 PPIV_MORLA PILIN GENE INVERTINGMORAXELLA 152– PROTEIN LACUNATA 182 PPLC_BACCE PHOSPHODIESTERASEBACILLUS 217– PRECURSOR CEREUS 245 PPLC_BACTU PHOSPHODIESTERASE BACILLUS216– PRECURSOR THURINGIENSIS 245 PPLC_LISMO PHOSPHODIESTERASE LISTERIA238– PRECURSOR MONOCYTOGENES 265 PPLSC_ECOLI ACYLTRANSFERASE ESCHERICHIA106– COLI 133 PPLSX_ECOLI PLSX PROTEIN ESCHERICHIA 241– COLI 270PPLYD_ERWCA PECTIN LYASE ERWINIA  27– CAROTOVORA 92 PPMBA_ECOLI PMBAPROTEIN ESCHERICHIA  9– COLI 50 PPME_ERWCH PECTINESTERASE PRECURSORERWINIA  60– CHRYSANTHEMI 87 PPMGY_ECOLI PHOSPHOGLYCERATE MUTASEESCHERICHIA  82– COLI 116 PPMGY_ZYMM PHOSPHOGLYCERATE MUTASE ZYMOMONAS 13– 80– MOBILIS 40 110 PPNP_ECOLI POLYRIBONUC ESCHERICHIA 260–NUCLEOTIDYLTRANSF COLI 294 PPNIK_SALTY PPNUC PROTEIN SALMONELLA 178–TYPHIMURIUM 205 PPODK_BACSY PYRUVATE, ORTHOPHOSPHATE BACTEROIDES  51–DIKINASE SYMBIOSIS 78 PPORF_PSESY OUTER MEMBRANE PORIN F PSEUDOMONAS111– PRECURSOR SYRINGAE 138 PPORO_PSEAE PORIN O PRECURSOR PSEUDOMONAS390– AERUGINOSA 424 PPORP_PSEAE PORIN P PRECURSOR PSEUDOMONAS 139– 260–369– AERUGINOSA 181 287 396 PPOTD_ECOLI BINDING PROTEIN PRECURSORESCHERICHIA 320– COLI 347 PPOTE_ECOLI PUTRESCINE-ORNITHINE ESCHERICHIA 91– ANTIPORTER COLI 118 PPOXB_ECOLI PYRUVATE DEHYDROGENASE ESCHERICHIA 8– COLI 38 PPPB3_BACSU ALKALINE PHOSPHATASE III BACILLUS 109– 433–PRECURSOR SUBTILIS 150 460 PPPB4_BACSU ALKALINE PHOSPHATASE IV BACILLUS 85– 336– PRECURSOR SUBTILIS 123 363 PPPB_ECOLI ALKALINE PHOSPHATASEESCHERICHIA 235– PRECURSOR COLI 262 PPPB_ESCFE ALKALINE PHOSPHATASEESCHERICHIA 236– PRECURSOR FERGUSONII 263 PPPCE_FLAME PROLYLENDOPEPTIDASE FLAVOBACTERIUM 158– PRECURSOR MENINGOSEPTICUM 199PPPCF_FLAME PROLYL ENDOPEPTIDASE FLAVOBACTERIUM 158– 256– PRECURSORMENINGOSEPTICUM 199 283 PPPCK_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA  45–CARDOXYKINASE COLI 72 PPPDA_CLOPE PROTEIN A PRECURSOR CLOSTRIDIUM  73–PERFRINGENS 107 PPPSA_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA  49–SYNTHASE COLI 76 PPQQ2_ACICA COENZYME PQQ SYNTHESIS ACINETOBACTER  40–PROTEIN II CALCOACETICUS 74 PPRCA_ANAVA CALCIUM DEPENDENT PROTEASEANABAENA 371– PRECURSOR VARIABILIS 398 PPRCA_THEAC PROTEASOME, ALPHASUBUNIT THERMOPLASMA  88– ACIDOPHILUM 115 PPRC_ECOLI TAIL-SPECIFICPROTEASE ESCHERICHIA 158– 366– PRECURSOR COLI 192 393 PPRE1_STAAUPLASMID RECOMBINATION STAPHYLOCOCCUS  27– 152– 264– ENZYME AUREUS 78 179347 PPRE2_STAAU PLASMID RECOMBINATION STAPHYLOCOCCUS  48– 181– 310– 366–ENZYME AUREUS 75 208 361 393 PPREA_LACPL PLASMID RECOMBINATIONLACTOBACILLUS  37– 291– ENZYME PLANTARUM 71 318 PPRE_BACLI REGULATORYPROTEIN BACILLUS  2– LICHENIFORMIS 40 PPRE_BACSP PLASMID RECOMBINATIONBACILLUS SP 181– 288– ENZYME 224 345 PPRE_STRAG PLASMID RECOMBINATIONSTREPTOCOCCUS 285– 332– 420– ENZYME AGALACTIAE 319 359 454 PPRFA_LISMOLISTERIOLYSIN REGULATORY LISTERIA  76– 173– PROTEIN MONOCYTOGENES 110204 PPRIA_ECOLI PRIMOSOMAL PROTEIN N ESCHERICHIA 218– COLI 245PPRIM_BACSU DNA PRIMASE BACILLUS 383– SUBTILIS 433 PPRIM_BUCAP DNAPRIMASE BUCHNERA  13– 282– APHIDICOLA 43 319 PPRIM_CLOAB DNA PRIMASECLOSTRIDIUM  87– ACETOBUTYLICUM 114 PPRIM_LACLA DNA PRIMASE LACTOCOCCUS269– LACTIS 296 PPRIM_RICPR DNA PRIMASE RICKETTSIA  10– 245– 477– 526–PROWAZEKII 37 286 504 593 PPRIS_DESDE PRISMANE PROTEIN DESULFOVIBRIO 30– DESULFURICANS 57 PPRLB_ACHLY BETA-LYTIC ACHROMOBACTER 317–METALLOENDOPEPTIDASE LYTICUS 344 PPRLB_LYSEN BETA-LYTIC LYSOBACTER 121–METALLOENDOPEPTIDASE ENZYMOGENES 148 PPRO1_LISMO ZINC METALLOPROTEINASELISTERIA 111– 275– PRECURSOR MONOCYTOGENES 145 316 PPRO2_LISMO ZINCMETALLOPROTEINASE LISTERIA 111– PRECURSOR MONOCYTOGENES 145 PPROA_SERMAGAMMA-GLUTAMYL PHOSPHATE SERRATIA 309– REDUCTASE MARCESCENS 336PPROA_STAAU PROTEIN A PRECURSOR STAPHYLOCOCCUS  2– AUREUS 29 PPROB_SERMAGLUTAMATE 5-KINASE SERRATIA  7– MARCESCENS 34 PPROB_STRAG PROTEIN BSTREPTOCOCCUS  58– AGALACTIAE 85 PPROC_PSEAE PYRROLINE-5-CARBOXYLATEPSEUDOMONAS 148– REDUCTASE AERUGINOSA 175 PPROH_BACSUPYRROLINE-5-CARBOXYLATE BACILLUS 200– REDUCTASE HOMOL SUBTILIS 227PPROP_ECOLI PROLINE/BETAINE ESCHERICHIA 460– TRANSPORTER COLI 487PPROV_ECOLI PERIPHERAL MEMBRANE ESCHERICHIA  24– PROTEIN PROV COLI 54PPROV_SALTY PERIPHERAL MEMBRANE SALMONELLA  24– PROTEIN PROV TYPHIMURIUM54 PPRRB_ECOLI PRRB PROTEIN ESCHERICHIA 170– COLI 197 PPRRC_ECOLIANTICODON NUCLEASE ESCHERICHIA 282– COLI 309 PPRRD_ECOLI PRRD PROTEINESCHERICHIA 278– COLI 305 PPRSA_BACSU PROTEIN EXPORT PROTEIN BACILLUS 52– 95– PRSA PRECURSOR SUBTILIS 87 157 PPRTA_STRGR PROTEASE A PRECURSORSTREPTOMYCES  56– GRISEUS 110 PPRTC_ERWCH SECRETED PROTEASE C ERWINIA103– PRECURSOR CHRYSANTHEMI 130 PPRTC_PORG1 COLLAGENASE PRECURSORPORPHYROMONAS 285– GINGIVALIS 312 PPRTD_ERWCH PROTEASES SECRETIONERWINIA 328– PROTEIN PRTD CHRYSANTHEMI 355 PPRTE_BACNO EXTRACELLULARSERINE BACTEROIDES 106– 219– 346– PROTEASE PRECURSOR NODOSUS 133 265 384PPRTE_ERWCH PROTEASES SECRETION ERWINIA 108– 158– 231– PROTEIN PRTECHRYSANTHEMI 135 192 290 PPRTF_ERWCH PROTEASES SECRETION ERWINIA 280–PROTEIN PRTF CHRYSANTHEMI 310 PPRTM_LACLA PROTEASE MATURATIONLACTOCOCCUS  76– 112– PROTEIN PRECURSOR LACTIS 103 139 PPRTM_LACLCPROTEASE MATURATION LACTOCOCCUS  26– 76– 112– PROTEIN PRECURSOR LACTIS53 103 139 PPRTM_LACPA PROTEASE MATURATION LACTOBACILLUS  76– 112–PROTEIN PRECURSOR PARACASEI 103 139 PPRTS_SERMA EXTRACELLULAR SERINESERRATIA 304– 576– 1007– PROTEASE PRECURSOR MARCESCENS 331 607 1041PPRTT_SERMA EXTRACELLULAR SERINE SERRATIA 304– 464– 1007– PROTEASEPRECURSOR MARCESCENS 331 491 1041 PPRTX_ERWCH SECRETED PROTEASE CERWINIA 314– PRECURSOR CHRYSANTHEMI 341 PPSAA_SYNEN CHLOROPHYLL AAPOPROTEIN SYNECHOCOCCUS 120– A1 ELONGATUS 147 NAEGEL PPSAA_SYNP2CHLOROPHYLL A APOPROTEIN SYNECHOCOCCUS SP 109– 326– A1 136 356PPSAA_SYNVU CHLOROPHYLL A APOPROTEIN SYNECHOCOCCUS 120– A1 VULCANUS 147PPSAA_SYNY3 CHLOROPHYLL A APOPROTEIN SYNECHOCYSTIS SP  44– 120– 338– A171 147 368 PPSAB_YERPE CHAPERONE PROTEIN PSAB YERSINIA 244– PRECURSORPESTIS 271 PPSAD_SYNP6 PHOTOSYSTEM 1 REACTION SYNECHOCOCCUS SP  11–CENTRE SUBUNIT II 38 PPSAE_YERPE PSAE PROTEIN PRECURSOR YERSINIA  66–PESTIS 118 PPSBO_ANAN1 STABILIZING POLYPEPTIDE ANACYSTIS  99– 209–PRECURSOR NIDULANS 126 243 PPSPA_ECOLI PHAGE SHOCK PROTEIN A ESCHERICHIA 55– COLI 82 PFSRA_WOLSU POLYSULFIDE REDUCTASE WOLINELLA 114– CHAIN APRECURSOR SUCCINOGENES 141 PPSTS_ECOLI PHOSPHATE-BINDING PROTEINESCHERICHIA  40– PRECURSOR COLI 74 PPT1_BACSU PHOSPHOTRANSFERASEBACILLUS  26– SUBTILIS 60 PPT1_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA 135–399– COLI 162 426 PPT1_SALTY PHOSPHOTRANSFERASE SALMONELLA 232– 399–TYPHIMURIUM 259 426 PPT1_STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS  34–CARNOSUS 61 PPT1_STRSL PHOSPHOTRANSFERASE STREPTOCOCCUS  34– 198–SALIVARIUS 61 232 PPT28_ERWCH PHOSPHOTRANSFERASE ERWINIA 127– ENZYME IICHRYSANTHEMI 154 PPT2G_BACSU PHOSPHOTRANSFERASE BACILLUS 670– ENZYME IISUBTILIS 697 PPT2L_LACCA PHOSPHOTRANSFERASE LACTOBACILLUS 537– ENZYME IICASEI 564 PPT2L_LACLA PHOSPHOTRANSFERASE LACTOCOCCUS 183– 409– ENZYME IILACTIS 214 436 PPT2L_STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS 421– 530–ENZYME II AUREUS 448 557 PPT2M_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA 445–ENZYME II COLI 489 PPT2M_STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS 388–ENZYME II CARNOSUS 415 PPT2N_ECOLI N-ACETYLGLUCOSAMINE- ESCHERICHIA 370–PERMEASE COLI 400 PPT25_STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS 600–ENZYME II MUTANS 627 PPT3F_SALTY PHOSPHOTRANSFERASE FPR SALMONELLA 107–PROTEIN TYPHIMURIUM 134 PPT3L_LACCA PHOSPHOTRANSFERASE LACTOBACILLUS 40– FACTOR III CASEI 67 PPTHP_ECOLI PHOSPHOCARRIER PROTEIN ESCHERICHIA 31– HPR COLI& 65 SALMONELLA TYPHIMURIUM PPTHP_KLEPN PHOSPHOCARRIERPROTEIN KLEBSIELLA  31– HPR PNEUMONIAE 65 PPTRB_ECOLI PROTEASE IIESCHERICHIA 94– 217– COLI 121 251 PPULA_KLEAE PULLULANASE KLEBSIELLA894– AEROGENES 928 PPULA_KLEPN PULLULANASE KLEBSIELLA 894– PNEUMONIAE918 PPULO_KLEPN LEADER PEPTIDASE KLEBSIELLA 178– PNEUMONIAE 205PPULS_KLEPN PULS PRECURSOR KLEBSIELLA  70– PNEUMONIAE 97 PPUPA_PSEPUUPTAKE PROTEIN PRECURSOR PSEUDOMONAS 112– 210– 429– 736– PUTIDA 162 237463 763 PPUR1_BACSU AMIDOPHOSPHORIBOSYLTRANSF BACILLUS 394– PRECSUBTILIS 421 PPUR2_BACSU PHOSPHORIBOSYLAMINE- BACILLUS 349– GLYCINELIGASE SUBTILIS 376 PPUR3_BACSU FORMYLTRANSFERASE BACILLUS 149– SUBTILIS176 PPUR3_ECOLI FORMYLTRANSFERASE ESCHERICHIA  27– COLI 54 PPUR4_BACSUSYNTHASE I BACILLUS  18– SUBTILIS 45 PPUR5_BACSU CYCLO-LIGASE BACILLUS153– SUBTILIS 194 PPUR6_ECOLI AIR CARBOXYLASE ESCHERICHIA 131– COLI 158PPUR7_BACSU SAICAR SYNTHETASE BACILLUS  3– SUBTILIS 43 PPUR8_BACSUADENYLOSUCCINATE LYASE BACILLUS 56– 226– SUBTILIS 130 253 PPUR8_ECOLIADENYLOSUCCINATE LYASE ESCHERICHIA 194– 331– COLI 221 372 PPUR9_BACSUAICAR TRANSFORMYLASE BACILLUS  19– 345– SUBTILIS 53 372 PPUR9_ECOLIAICAR TRANSFORMYLASE ESCHERICHIA 239– COLI 268 PPUR9_SALTY AICARTRANSFORMYLASE SALMONELLA 218– TYPHIMURIUM 247 PPURL_BACSU SYNTHASE IIBACILLUS 609– SUBTILIS 636 PPYG1_ANASP LINKER POLYPEPTIDE CPCGI ANABAENASP  88– 115 PPYG1_MASLA LINKER POLYPEPTIDE CPCG1 MASTIGOCLADUS  89–LAMINOSUS 116 PPYG2_ANASP LINKER POLYPEPTIDE CPCG2 ANABAENA SP  88– 115PPYG2_MASLA LINKER POLYPEPTIDE CPCG2 MASTIGOCLADUS  89– LAMINOSUS 116PPYG3_MASLA LINKER POLYPEPTIDE CPCG3 MASTIGOCLADUS  91– LAMINOSUS 132PPYG4_ANASP LINKER POLYPEPTIDE CPCG4 ANABAENA SP  90– 131 PPYR1_ANASP32.1 KD LINKER POLYPEPTIDE ANABAENA SP  35– 62 PPYR2_FREDI 27.9 KDLINKER POLYPEPTIDE FREMYELLA 105– DIPLOSIPHON 132 PPYR4_FREDI 31.6 KDLINKER POLYPEPTIDE FREMYELLA  22– DIPLOSIPHON 66 PPYR5_FREDI 37.5 KDLINKER POLYPEPTIDE FREMYELLA 106– DIPLOSIPHON 143 PPYR6_FREDI 30.8 KDLINKER POLYPEPTIDE FREMYELLA  43– 113– DIPLOSIPHON 70 140 PPYRB_BACSUASPARTATE BACILLUS  9– CARBAMOYLTRANSFERASE SUBTILIS 36 PPYRB_SERMAASPARTATE SERRATIA  70– CARBAMOYLTRANSFERASE MARCESCENS 97 PPYRD_ECOLIDIHYDROOROTATE ESCHERICHIA 115– DEHYDROGENASE COLI 142 PPYRD_SALTYDIHYDROOROTATE SALMONELLA 115– 183– DEHYDROGENASE TYPHIMURIUM 142 210PPYRG_BACSU CTP SYNTHASE BACILLUS 275– 322– SUBTILIS 302 349 PPYS1_FREDIPHYCOBILISOME 9.7 KD FREMYELLA  21– LINKER POLYPEPTIDE DIPLOSIPHON 48PQOR_ECOLI QUINONE OXIDOREDUCTASE ESCHERICHIA 180– COLI 215 PQUEA_ECOLIQUEUOSINE BIOSYNTHESIS ESCHERICHIA 234– PROTEIN QUEA COLI 261PR34K_CLOPA 34 2 KD PROTEIN IN CLOSTRIDIUM  23– 157– RUBREDOXIN OPERONPASTEURIANUM 50 232 PRACC_ECOLI RACC PROTEIN ESCHERICHIA  5– COLI 32PRACD_STRTR ASPARTATE RACEMASE STREPTOCOCCUS 152– THERMOPHILUS 189PRACX_BACSU PROBABLE AMINO ACID BACILLUS 132– RACEMASE SUBTILIS 162PRAFA_ECOLI ALPHA-GALACTOSIDASE ESCHERICHIA  89– COLI 116 PRAFD_ECOLIRAFFINOSE INVERTASE ESCHERICHIA 348– COLI 375 PRBSC_ECOLI RIBOSETRANSPORT SYSTEM ESCHERICHIA  65– 195– COMPONENT COLI 99 222 PRBSK_ECOLIRIBOKINASE ESCHERICHIA 200– COLI 239 PRBTR_KLEAE RIBITOL (RBT) OPERONKLEBSIELLA  6– REPRESSOR AEROGENES 47 PRCSA_ECOLI BIOSYNTHESISACTIVATION ESCHERICHIA 170– PROTEIN A COLI 197 PRCSA_ERWAM BIOSYNTHESISACTIVATION ERWINIA 92– 174– PROTEIN A AMYLOVORA 119 201 PRCSA_ERWSTBIOSYNTHESIS ACTIVATION ERWINIA 174– PROTEIN A STEWARTII 201 PRCSA_KLEAEBIOSYNTHESIS ACTIVATION KLESIELLA 168– PROTEIN A AEROGENES 205PRCSB_ECOLI CAPSULE SYNTHESIS B ESCHERICHIA  14– 159– COMPONENT COLI 41186 PREC2_LEGPN RECA PROTEIN LEGIONELLA 262– PNEUMOPHILA 310 PRECA_ACHLARECA PROTEIN ACHOLEPLASMA 283– LAIDLAWII 310 PRECA_AGRTU RECA PROTEINAGROBACTERIUM  3– 132– 281– TUMEFACIENS 30 159 308 PRECA_ANAVA RECAPROTEIN ANABAENA 322– VARIABILIS 349 PRECA_AQUPY RECA PROTEIN AQUIFEX 63– 126– PYROPHILUS 90 153 PRECA_BACFR RECA PROTEIN BACTEROIDES 108–FRAGILIS 135 PRECA_BACSU RECE PROTEIN BACILLUS 267– SUBTILIS 294PRECA_BRUAB RECA PROTEIN BRUCELLA  3– 132– 280– ABORTUS 30 159 307PRECA_BURCE RECA PROTEIN BURKHOLDERIA  75– CEPACIA 109 PRECA_ERWCA RECAPROTEIN ERWINIA 284– CAROTOVORA 311 PRECA_LACDE RECA PROTEINLACTOBACILLUS  20– DELBRUECKII 47 PRECA_LACHE RECA PROTEIN LACTOBACILLUS 20– HELVETICUS 47 PRECA_LACLA RECA PROTEIN LACTOCOCCUS 135– 232– 288–LACTIS 162 269 335 PRECA_METCL RECA PROTEIN METHYLOMONAS 266– CLARA 303PRECA_METFL RECA PROTEIN METHYLOBACILLUS 276– FLAGELLATUM 303PRECA_MYCPU RECA PROTEIN MYCOPLASMA  30– PULMONIS 57 PRECA_MYCTU RECAPROTEIN MYCOBACTERIUM 749– TUBERCULOSIS 776 PRECA_NEIGO RECA PROTEINNEISSERIA 263– GONORRHOEAE 310 PRECA_PROM1 RECA PROTEIN PROTEUS 283–MIRABILIS 310 PRECA_PSEAE RECA PROTEIN PSEUDOMONAS 282– AERUGINOSA 309PRECA_RHILP RECA PROTEIN RHIZOBIUM  3– 131– 280– LEGUMINOSARUM 30 158307 PRECA_RHILV RECA PROTEIN RHIZOBIUM 119– 268– LEGUMINOSARUM 146 295PRECA_RHIME RECA PROTEIN RHIZOBIUM 119– 268– MELILOTI 146 295PRECA_RHOSH RECA PROTEIN RHODOBACTER 119– SPHAEROIDES 146 PRECA_STRPNRECA PROTEIN STREPTOCOCCUS 134– 293– PNEUMONIAE 161 327 PRECA_SYNP2 RECAPROTEIN SYNECHOCOCCUS SP 124– 151 PRECA_VIBCH RECA PROTEIN VIBRIO 290–CHOLERAE 317 PRECF_BACSU RECF PROTEIN BACILLUS  4– 178– SUBTILIS 31 205PRECF_ECOLI RECF PROTEIN ESCHERICHIA  82– 147– COLI 109 174 PRECF_PROM1RECF PROTEIN PROTEUS  86– MIRABILIS 113 PRECF_PSE3U RECF PROTEINPSEUDOMONAS  84– PUTIDA 111 PRECF_SALTY RECF PROTEIN SALMONELLA 147–TYPHIMURIUM 174 PRECJ_ECOLI EXONUCLEASE RECJ ESCHERICHIA  52– COLI 79PRECN_BACSU RECOMBINATION PROTEIN BACILLUS  21– 156– 192– 299– 344–SUBTILIS 48 184 247 336 378 PRECQ_ECOLI DNA HELICASE RECQ ESCHERICHIA468– COLI 495 PRELA_ECOLI GTP PYROPHOSPHOKINASE ESCHERICHIA 680– COLI707 PREMA_BACSU REPLICATION AND BACILLUS 2–  81– MAINTENANCE SUBTILIS 36108 PROTEIN PREMA_STAAU REPLICATION AND STAPHYLOCOCCUS  2– 81–MAINTENANCE AUREUS 36 108 PROTEIN PREMA_STAEP REPLICATION ANDSTAPHYLOCOCCUS  2– 81– MAINTENANCE EPIDERMIDIS 36 108 PROTEINPREPS_ECOLI REPLICATION PROTEIN REPA ESCHERICHIA  50– 90– COLI 77 117PREPA_BACSU REPA PROTEIN BACILLUS 342– SUBTILIS 373 PREPA_ECOLI REPAPROTEIN ESCHERICHIA  91– 228– COLI 118 255 PREPA_NEIGO REPLICATIONPROTEIN NEISSERIA  57– 138– GONORRHOEAE 84 172 PREPB_LACPL REPLICATIONPROTEIN REPB LACTOBACILLUS 184– PLANTARUM 211 PREPM_STAAU REPLICATIONINITIATION STAPHYLOCOCCUS 254– PROTEIN AUREUS 284 PREPN_STAAUREPLICATION INITIATION STAPHYLOCOCCUS 258– PROTEIN AUREUS 285PREPR_STRAG REPR PROTEIN STREPTOCOCCUS 430– AGALACTIAE 467 PREPS_STRPYREPS PROTEIN STREPTOCOCCUS 423– PYOGENES 467 PREPX_STAAU REP PROTEINSTAPHYLOCOCCUS 111– 172– AUREUS 150 210 PREPY_ECOLI REPLICATIONINITIATION ESCHERICHIA 288– PROTEIN COLI 315 PREP_CLOPE REPLICATIONPROTEIN CLOSTRIDIUM 168– 297– 343– PERFRINGENS 195 324 375 PREP_ECOLIREP HELICASE ESCHERICHIA 119– 205– COLI 146 243 PREP_LACPL REP PROTEINLACTOBACILLUS 119– 260– PLANTARUM 199 287 PRESP_CLOPE RESOLVASECLOSTRIDIUM  68– 151– PERFRINGENS 102 185 PRF2_BACSU PROBABLE PEPTIDECHAIN BACILLUS  34– RELEASE FACTOR 2 SUBTILIS 68 PRF2_ECOLI PEPTIDECHAIN RELEASE ESCHERICHIA  86– 163– FACTOR 2 COLI 113 204 PRF2_SALTYPEPTIDE CHAIN RELEASE SALMONELLA  86– 163– FACTOR 2 TYPHIMURIUM 113 204PRF3_ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA 180– 443– FACTOR 3 COLI 210473 PRFAB_ECOLI 1,6-GALACTOSYLTRANSFERASE ESCHERICHIA 199– COLI 226PRFAG_ECOLI BIOSYNTHESIS PROTEIN RFAG ESCHERICHIA 185– COLI 212PRFAJ_ECOLI 1,2-GLUCOSYLTRANSFERASE ESCHERICHIA  39– 233– COLI 66 268PRFAJ_SALTY 1,2-GLUCOSYLTRANSFERASE SALMONELLA  68– 145– 236–TYPHIMURIUM 95 172 263 PRFAK_SALTY 1,2-N-ACETYLGLUCOSAMINE- SALMONELLA335– TRANSFERASE TYPHIMURIUM 369 PRFAL_ECOLI O-ANTIGEN LIGASEESCHERICHIA 366– COLI 393 PRFAL_SALTY O-ANTIGEN LIGASE SALMONELLA 326–TYPHIMURIUM 360 PRFAP_ECOLI BIOSYNTHESIS PROTEIN RFAP ESCHERICHIA  8–COLI 35 PRFAS_ECOLI BIOSYNTHESIS PROTEIN RFAS ESCHERICHIA  62– 184– COLI89 240 PRFAY_ECOLI BIOSYNTHESIS PROTEIN RFAY ESCHERICHIA  18– COLI 45PRFAZ_ECOLI BIOSYNTHESIS PROTEIN RFAZ ESCHERICHIA  3– 85– COLI 30 112PRFBB_SALTY DTDP-GLUCOSE 4,6- SALMONELLA 320– DEHYDRATASE TYPHIMURIUM359 PRFBM_SALTY MANNOSE-1-PHOSPHATE SALMONELLA 313– GUANYLYLTRANSFERASETYPHIMURIUM 361 PRFBS_SALTI PARATOSE SYNTHASE SALMONELLA 22– 205– TYPHI56 232 PRFEA_VIBAN PRECURSOR FOR FERRIC VIBRIO 349– ANGUIBACTINANGUILLARUM 376 PRFH_ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA  83– FACTORHOMOLOG COLI 110 PRG12_BACTU PUTATIVE G12 SITE-SPECIFIC BACILLUS  15–190– 310– RECOMBINASE THURINGIENSIS 68 262 383 PRHAB_ECOLIRHAMNULOKINASE ESCHERICHIA 175– COLI 202 PRHAB_SALTY RHAMNULOKINASESALMONELLA 175– TYPHIMURIUM 202 PRHAR_ECOLI L-RHAMNOSE OPERONESCHERICHIA  10– TRANSACTIVATOR COLI 41 PRHAS_ECOLI L-RHAMNOSE OPERONREG ESCHERICHIA 152– PROTEIN RHAS COLI 179 PRHIR_RHILV RHIR REGULATORYPROTEIN RHIZOBIUM 206– LEGUMINOSARUM 233 PRHLB_ECOLI RNA HELICASERHLB/MMRA ESCHERICHIA 138– COLI 165 PRHO_BORBU TRANS TERM FACTOR RHOBORRELIA 215– 327– BURGDORFERI 242 369 PRHPR_BACSU PROTEASE PROD REGBACILLUS  82– PROTEIN HPR SUBTILIS 109 PRHSA_ECOLI RHSA PROTEINPRECURSOR ESCHERICHIA 667– COLI 694 PRHSB_ECOLI RHSB PROTEIN PRECURSORESCHERICHIA 667– COLI 694 PRHSC_ECOLI RHSC PROTEIN PRECURSOR ESCHERICHIA380– 667– 1056– COLI 414 694 1083 PRHSD_ECOLI RHSD PROTEIN PRECURSORESCHERICHIA 671– 1071– COLI 712 1098 PRHSE_ECOLI RHSE PROTEINESCHERICHIA 345– COLI 372 PRIML_ECOLI ACETYLTRANSFERASE ESCHERICHIA  93–COLI 127 PRJR2_ECOLI RIBONUCLEOSIDE-DIPHOSPHATE ESCHERICHIA 167–REDUCTASE COLI 194 PRJSA_PHOLE RIBOFLAVIN SYNTHASE ALPHA PHOTOBACTERIUM 2– 131– CHAIN LEIOGNATHI 47 158 PRISB_BACSU RIBOFLAVIN SYNTHASE BETABACILLUS  8– CHAIN SUBTILIS 35 PRISB_PHOLE RIBOFLAVIN SYNTHASE BETAPHOTOBACTERIUM  14– CHAIN LEIOGNATHI 41 PRL10_STRAT 50 S RIBOSOMALPROTEIN L10 STREPTOMYCES 14– 106– ANTIBIOTICUS 72 133 PRL12_SYNY3 50 SRIBOSOMAL PROTEIN L12 SYNECHOCYSTIS SP  2– 34 PRL12_THEMA 50 S RIBOSOMALPROTEIN L12 THERMOTOGA  8– 56– MARITIMA 35 86 PRL14_BACST 50 S RIBOSOMALPROTEIN L14 BACILLUS  18– STEAROTHERMOPHILUS 45 PRL14_MICLU 50 SRIBOSOMAL PROTEIN L14 M1CROCOCCUS  18– LUTEUS 45 PRL14_MYCCA 50 SRIBOSOMAL PROTEIN L14 MYCOPLASMA  51– CAPRICOLUM 92 PRL15_BACLI 50 SRIBOSOMAL PROTEIN L15 BACILLUS  21– LICHENIFORMIS 48 PRL15_BACST 50 SRIBOSOMAL PROTEIN L15 BACILLUS  95– STEAROTHERMOPHILUS 134 PRL15_BACSU50 S RIBOSOMAL PROTEIN L15 BACILLUS  95– SUBTILIS 122 PRL15_CHLTR 50 SRIBOSOMAL PROTEIN L15 CHLAMYDIA 110– TRACHOMATIS 144 PRL15_ECOLI 50 SRIBOSOMAL PROTEIN L15 ESCHERICHIA  79– COLI 113 PRL15_LACLA 50 SRIBOSOMAL PROTEIN L15 LACTOCOCCUS  8– LACTIS 35 PRL15_METVA 50 SRIBOSOMAL PROTEIN L15 METHANOCOCCUS  68– VANNIELII 102 PRL15_MYCCA 50 SRIBOSOMAL PROTEIN L15 MYCOPLASMA  63– CAPRICOLUM 135 PRL18_BACST 50 SRIBOSOMAL PROTEIN L18 BACILLUS  31– STEAROTHERMOPHILUS 58 PRL18_CHLTR 50S RIBOSOMAL PROTEIN L18 CHLAMYDIA  32– TRACHOMATIS 86 PRL18_HALMA 50 SRIBOSOMAL PROTEIN L18 HALOARCULA  80– MARISMORTUI 107 PRL18_MYCCA 50 SRIBOSOMAL PROTEIN L18 MYCOPLASMA  61– CAPRICOLUM 88 PRL19_ECOLI 50 SRIBOSOMAL PROTEIN L19 ESCHERICHIA  25– COLI 52 PRL19_HALMA 50 SRIBOSOMAL PROTEIN L19 HALOARCULA 101– MARISMORTUI 128 PRL19_METVAPROBABLE 50 S RIBOSOMAL METHANOCOCCUS  45– PROTEIN VANNIELII 72PRL1_PROVU 50 S RIBOSOMAL PROTEIN L1 PROTEUS 159– VULGARIS 194PRL1_SULSO 50 S RIBOSOMAL PROTEIN L1 SULFOLOBUS  5– 184– SOLFATARICUS 32211 PRL20_ECOLI 50 S RIBOSOMAL PROTEIN L20 ESCHERICHIA  14– COLI 41PRL20_MYCFE 50 S RIBOSOMAL PROTEIN L20 MYCOPLASMA  14– FERMENTANS 41PRL21_BACSU 50 S RIBOSOMAL PROTEIN L21 BACILLUS  4– SUBTILIS 38PRL22_ECOLI 50 S RIBOSOMAL PROTEIN L22 ESCHERICHIA  28– COLI 55PRL23_METVA 50 S RIBOSOMAL PROTEIN L23 METHANOCOCCUS  30– VANNIELII 57PRL23_MYCCA 50 S RIBOSOMAL PROTEIN L23 MYCOPLASMA  32– CAPRICOLUM 59PRL24_HALMA 50 S RIBOSOMAL PROTEIN L24 HALOARCULA  48– MARISMORTUI 75PRL24_METVA 50 S RIBOSOMAL PROTEIN L24 METHANOCOCCUS  61– VANNIELII 90PRL24_MICLU 50 S RIBOSOMAL PROTEIN L24 MICROCOCCUS  36– LUTEUS 63PRL29_CHLTR 50 S RIBOSOMAL PROTEIN L29 CHLAMYDIA  39– TRACHOMATIS 66PRL29_ECOLI 50 S RIBOSOMAL PROTEIN L29 ESCHERICHIA  36– COLI 63PRL29_MYCCA 50 S RIBOSOMAL PROTEIN L29 MYCOPLASMA  39– CAPRICOLUM 85PRL4_BACST 50 S RIBOSOMAL PROTEIN L4 BACILLUS 141– STEAROTHERMOPHILUS168 PRL4_MYCCA 50 S RIBOSOMAL PROTEIN L4 MYCOPLASMA 144– CAPRICOLUM 198PRL5_THETH 50 S RIBOSOMAL PROTEIN L5 THERMUS  38– AQUATICUS 65PRL6_BACST 50 S RIBOSOMAL PROTEIN L6 BACILLUS  79– STEAROTHERMOPHILUS106 PRL6_ECOLI 50 S RIBOSOMAL PROTEIN L6 ESCHERICHIA  19– COLI 46PRL6_METVA 50 S RIBOSOMAL PROTEIN L6 METHANOCOCCUS 129– VANNIELII 159PRL9_BACST 50 S RIBOSOMAL PROTEIN L9 BACILLUS  47– STEAROTHERMOPHILUS 77PRL9_ECOLI 50 S RIBOSOMAL PROTEIN L9 ESCHERICHIA 112– COLI 140PRLAO_HALCU ACIDIC RIBOSOMAL PROTEIN HALOBACTERIUM 138– P0 HOMOLOGCUTIRUBRUM 182 PRLAO_HALHA ACIDIC RIBOSOMAL PROTEIN HALOBACTERIUM 138–P0 HOMOLOG HALOBIUM 182 PRLAO_HALMA ACIDIC RIBOSOMAL PROTEIN HALOARCULA 64– 153– P0 HOMOLOG MARISMORTUI 91 184 PRLAO_METVA ACIDIC RIBOSOMALPROTEIN METHANOCOCCUS 194– P0 HOMOLOG VANNIELII 221 PRLA_HALEU RIBOSOMALPROTEIN ‘A’ HALOPHILIC  59– EUBACTERIUM NRCC 41227 86 PRLA_HALHA 50 SRIBOSOMAL PROTEIN L20 HALOBACTERIUM  2– HALOBIUM 29 PRLA_HALMA 50 SRIBOSOMAL PROTEIN L12 HALOARCULA  2– MARISMORTUI 29 PRLA_METVA RIBOSOMALPROTEIN ‘A’ METHANOCOCCUS  2– VANNIELII 29 PRLA_MICEU 70 S RIBOSOMALPROTEIN MA MICROCOCCUS  55– 90– LUTEUS 82 117 PRLX1_SALTY 43 KDRELAXATION PROTEIN SALMONELLA 226– TYPHIMURIUM 260 PRLX1_STAAU RLXPROTEIN STAPHYLOCOCCUS 3– 102– 177– 266– AUREUS 30 132 218 300PRLX2_SALTY 22 KD RELAXATION PROTEIN SALMONELLA  19– TYPHIMURIUM 53PRLX2_STAAU RLX PROTEIN STAPHYLOCOCCUS 3– 102– 261– AUREUS 30 133 295PRLX3_STAAU RLX PROTEIN STAPHYLOCOCCUS 3– 146– AUREUS 30 216 PRLX_SULSO50 S RIBOSOMAL PROTEIN LX SULFOLOBUS  32– SOLFATARICUS 62 PRNBR_BACAMRIBONUCLEASE PRECURSOR BACILLUS  33– 129– AMYLOLIQUEFACIENS 67 156PRNC_ECOLI RIBONUCLEASE III ESCHERICHIA  10– 117– COLI 37 144 PRNE_ECOLIRIBONUCLEASE E ESCHERICHIA 413– 628– COLI 440 662 PRNPA_BUCAPRIBONUCLEASE P PROTEIN BUCHNERA  85– COMPONENT APHIDICOLA 114PRNPH_BACSU RIBONUCLEASE PH BACILLUS 159– SUBTILIS 186 PRNS_ECOLIREGULATORY PROTEIN RNS ESCHERICHIA 116– COLI 160 PRN_BACCI RIBONUCLEASEBACILLUS  82– CIRCULANS 109 PRN_BACIN RIBONUCLEASE PRECURSOR BACILLUS 38– INTERMEDIUS 72 PRP28_BACTK RNA POLYMERASE SIGMA-28 BACILLUS  73–FACTOR PRECURSOR THURINGIENSIS 107 PRP32_CITFR RNA POLYMERASE SIGMA-32CITROBACTER  30– FACTOR FREUNDII 57 PRP35_BACTK RNA POLYMERASE SIGMA-35BACILLUS  8– 63– FACTOR PRECURSOR THURINGIENSIS 35 90 PRP54_ALCEU RNAPOLYMERASE SIGMA-54 ALCALIGENES 229– FACTOR EUTROPHUS 266 PRP54_AZOCARNA POLYMERASE SIGMA-54 AZORHIZOBIUM 174– FACTOR CAULINODANS 208PRP54_BACSU RNA POLYMERASE SIGMA-54 BACILLUS  16– 97– 274– 396– FACTORSUBTILIS 43 124 308 423 PRP54_BRAJA RNA POLYMERASE SIGMA-54BRADYRHIZOBIUM  97– FACTOR 1 JAPONICUM 124 PRP54_KLEPN RNA POLYMERASESIGMA-54 KLEBSIELLA 148– FACTOR PNEUMONIAE 182 PRP54_RHOCA RNAPOLYMERASE SIGMA-54 RHODOBACTER 155– FACTOR CAPSULATUS 185 PRP55_BRAJARNA POLYMERASE S1GMA-54 BRADYRHIZOBIUM 145– FACTOR 2 JAPONICUM 172PRP5M_ALCEU PROBABLE SIGMA(54) ALCALIGENES  21– MODULATION PROTEINEUTROPHUS 51 PRP5M_ECOLI PROBABLE SIGMA(54) ESCHERICHIA  21– MODULATIONPROTEIN COLI 67 PRP5M_SALTY PROBABLE SIGMA(54) SALMONELLA  21–MODULATION PROTEIN TYPHIMURIUM 67 PRP70_BUCAP RNA POLYMERASE SIGMA-70BUCHNERA  69– 109– 173– 228– 303– FACTOR APHIDICOLA 96 136 217 255 337PRP70_CHLTR RNA POLYMERASE SIGMA-70 CHLAMYDIA  5– FACTOR TRACHOMATIS 32PRP70_ECOLI RNA POLYMERASE SIGMA-70 ESCHERICHIA 327– FACTOR COLI 361PRP70_PSEAE RNA POLYMERASE SIGMA-70 PSEUDOMONAS 334– FACTOR AERUGINOSA368 PRP70_RJCPR RNA POLYMERASE SIGMA-70 RICKETTSIA 244– 348– FACTORPROWAZEKII 321 382 PRP80_MYXXA RNA POLYMERASE SIGMA-80 MYXOCOCCUS 208–318– 359– FACTOR XANTHUS 235 347 386 PRPCF_SYNPY BILIN BIOSYNTHESISSYNECHOCOCCUS SP 180– PROTEIN RPCF 207 PRPOA_BACSU DNA-DIRECTED RNABACILLUS  55– POLYMERASE ALPHA CHAIN SUBTILIS 107 PRPOA_ECOLI A-DIRECTEDRNA ESCHERICHIA  57– POLYMERASE COLI& 105 ALPHA CHAIN SALMONELLATYPHIMURIUM PRPOA_HALHA DNA-DIRECTED RNA HALOBACTERIUM 863– POLYMERASEHALOBIUM 904 SUBUNIT A PRPOA_HALMO A-DIRECTED RNA HALOCOCCUS 229–POLYMERASE MORRHUAE 270 SUBUNIT A PRPOA_METTH DNA-DIRECTED RNAMETHANOBACTERIUM 218– 486– 642– POLYMERASE THERMOAUTOTROPHICU 245 513669 SUBUNIT A PRPOA_SULAC DNA-DIRECTED RNA SULFOLOBUS 222– 500– 693–POLYMERASE ACIDOCALDARIUS 256 527 720 SUBUNIT A PRPOA_THECE DNA-DIRECTEDRNA THERMOCOCCUS 228– POLYMERASE CELER 262 SUBUNIT A PRPOB_ECOLIDNA-DIRECTED RNA ESCHERICHIA 599– 1011– POLYMERASE COLI 626 1038 BETACHAIN PRPOB_MYCLE DNA-DIRECTED RNA MYCOBACTERIUM 723– 1084– POLYMERASELEPRAE 760 1111 BETA CHAIN PRPOB_SALTY A-DIRECTED RNA SALMONELLA 599–958– 1011– POLYMERASE TYPHIMURIUM 626 985 1038 BETA CHAIN PRPOB_SULACA-DIRECTED RNA SULFOLOBUS 160– 255– 534– 827– POLYMERASE ACIDOCALDARIUS187 282 561 861 SUBUNIT B PRPOB_THEMA A-DIRECTED RNA THERMOTOGA 350–POLYMERASE MARITIMA 377 BETA CHAIN PRPOC_ANASP DNA-DIRECTED RNA ANABAENASP 152– POLYMERASE 194 GAMMA CHAIN PRPOC_ECOLI DNA-DIRECTED RNAESCHERICHIA 786– 948– 1223– POLYMERASE COLI 813 994 1257 BETA CHAINPRPOC_HALHA DNA-DIRECTED RNA HALOBACTERIUM 175– POLYMERASE HALOBIUM 202SUBUNIT C PRPOC_HALMO DNA-DIRECTED RNA HALOCOCCUS  27– 117– 207–POLYMERASE MORRHUAE 54 144 234 SUBUNIT C PRPOC_METTH DNA-DIRECTED RNAMETHANOBACTERIUM  58– 272– 327– POLYMERASE THERMOAUTOTROPHICU 85 302 354SUBUNIT C PRPOC_MYCLE A-DIRECTED RNA MYCOBACTERIUM 273– 860– 911– 1131–POLYMERASE LEPRAE 300 887 938 1158 BETA CHAIN PRPOC_NOSCO DNA-DIRECTEDRNA NOSTOC 150– POLYMERASE COMMUNE 192 GAMMA CHAIN PRPOC_SULACDNA-DIRECTED RNA SULFOLOBUS  36– 172– 224– POLYMERASE ACIDOCALDARIUS 63214 251 SUBUNIT C PRPOC_THECE DNA-DIRECTED RNA THERMOCOCCUS  21–POLYMERASE CELER 58 SUBUNIT A PRPOD_NOSCO DNA-DIRECTED RNA NOSTOC  72–402– 539– POLYMERASE COMMUNE 116 449 566 DELTA CHAIN PRPOE_ECOLI RNAPOLYMERASE ESCHERICHIA  5– SIGMA-E FACTOR COLI 39 PRPOS_ECOLI RNAPOLYMERASE ESCHERICHIA 281– SIGMA FACTOR KATF COLI 308 PRPOU_HALHADNA-DIRECTED RNA HALOBACTERIUM  91– POLYMERASE HALOBIUM 118 SUBUNIT BPRPSA_AGRTU RNA POLYMERASE AGROBACTERIUM 310– 397– SIGMA-A FACTORTUMEFACIENS 347 427 PRPSA_ANASP RNA POLYMERASE ANABAENA SP  71– SIGMA-AFACTOR 105 PRPSA_CLOAB RNA POLYMERASE CLOSTRIDIUM  2– SIGMA-A FACTORACETOBUTYLICUM 29 PRPSA_STRAU RNA POLYMERASE STREPTOMYCES 278– SIGMAFACTOR RPOD AUREOFACIENS 305 PRPSB_ANASP RNA POLYMERASE ANABAENA SP  4–SIGMA-B FACTOR 31 PRPSB_BACSU RNA POLYMERASE BACILLUS  5– 169– 200–SIGMA-B FACTOR SUBTILIS 35 196 230 PRPSB_MYXXA RNA POLYMERASE MYXOCOCCUS 47– SIGMA-B FACTOR XANTHUS 74 PRPSB_STIAU RNA POLYMERASE STIGMATELLA 96– SIGMA-B FACTOR AURANTIACA 123 PRPSC_ANASP RNA POLYMERASE ANABAENASP  58– SIGMA-C FACTOR 85 PRPSD_BACSU RNA POLYMERASE BACILLUS 192–SIGMA-D FACTOR SUBTILIS 249 PRPSE_BACSU RNA POLYMERASE BACILLUS  63–SIGMA-E FACTOR SUBTILIS 90 PRECURSOR PRPSE_CLOAB RNA POLYMERASECLOSTRIDIUM  14– 116– SIGMA-E FACTOR ACETOBUTYLICUM 41 160 PRPSF_BACLIRNA POLYMERASE BACILLUS  4– 191– SIGMA-F FACTOR LICHENIFORMIS 31 248PRPSF_BACME RNA POLYMERASE BACILLUS 191– SIGMA-F FACTOR MEGATERIUM 225PRPSF_BACSU RNA POLYMERASE BACILLUS  4– 191– SIGMA-F FACTOR SUBTILIS 31248 PRPSH_BACLI RNA POLYMERASE BACILLUS 191– SIGMA-H FACTORLICHENIFORMIS 218 PRPSH_BACSU RNA POLYMERASE BACILLUS 186– SIGMA-HFACTOR SUBTILIS 213 PRPSK_BACSU RNA POLYMERASE BACILLUS  75– 189–SIGMA-K FACTOR SUBTILIS 109 216 PRPSP_STAAU RNA POLYMERASESTAPHYLOCOCCUS  19– SIGMA FACTOR PLAC AUREUS 46 PRPSW_STRCO RNAPOLYMERASE SIGMA STREPTOMYCES 232– FACTOR WHIG COELICOLOR 273PRPSX_BACTK POSSIBLE RNA POLYMERASE BACILLUS  33– S1GMA-G FACTORTHURINGIENSIS 60 PRS10_ECOLI 30 S RIBOSOMAL ESCHERICHIA  3– PROTEIN S10COLI 30 PRS11_BACSU 30 S RIBOSOMAL BACILLUS  8– PROTEIN S11 SUBTILIS 42PRS13_BACSU 30 S RIBOSOMAL BACILLUS  44– PROTEIN S13 SUBTILIS 85PRS17_METVA 30 S RIBOSOMAL METHANOCOCCUS  34– PROTEIN S17 VANNIELII 73PRS1_ECOLI 30 S RIBOSOMAL ESCHERICHIA  99– 144– PROTEIN S1 COLI 126 171PRS1_PROSP 30 S RIBOSOMAL PROVIDENCIA SP  39– 265– 349– PROTEIN S1 66292 376 PRS1_RHIME 30 S RIBOSOMAL RHIZOBIUM  91– 172– PROTEIN S1MELILOTI 125 217 PRS21_BACST 30 S RIBOSOMAL BACILLUS  1– PROTEIN S21STEAROTHERMOPHILUS 28 PRS2_SPICI 30 S RIBOSOMAL SPIROPLASMA  91– PROTEINS2 CITRI 125 PRS3_ACHLA 30 S RIBOSOMAL ACHOLEPLASMA  83– PROTEIN S3LAIDLAWII 110 PRS3_MYCCA 30 S RIBOSOMAL MYCOPLASMA  77– 136– PROTEIN S3CAPRICOLUM 106 163 PRS4_ECOLI 30 S RIBOSOMAL ESCHERICHIA  50– PROTEIN S4COLI 77 PRS5_HALMA 30 S RIBOSOMAL HALOARCULA 160– PROTEIN S5 MARISMORTUI187 PRS5_MYCCA 30 S RIBOSOMAL MYCOPLASMA  35– 182– PROTEIN S5 CAPRICOLUM62 216 PRS6_THETH 30 S RIBOSOMAL THERMUS  16– PROTEIN S6 AQUATICUS 43PRS7_METVA 30 S RIBOSOMAL METHANOCOCCUS  69– PROTEIN S7 VANNIELII 96PRS7_MYCLE 30 S RIBOSOMAL MYCOBACTERIUM  22– PROTEIN S7 LEPRAE 49PRS8_MICLU 30 S RIBOSOMAL MICROCOCCUS 103– PROTEIN S8 LUTEUS 130PRS8_MYCCA 30 S RIBOSOMAL MYCOPLASMA  41– PROTEIN S8 CAPRICOLUM 78PRSGA_ECOLI FERRITIN LIKE PROTEIN ESCHERICHIA  80– COLI 107 PRT67_ECOLIRNA-DIRECTED DNA ESCHERICHIA 225– POLYMERASE COLI 268 PSACB_BACAMLEVANSUCRASE PRECURSOR BACILLUS 175– 254– AMYLOLIQUEFACIENS 202 281PSACB_BACSU LEVANSUCRASE PRECURSOR BACILLUS 175– 254– SUBTILIS 202 288PSACB_STRMU LEVANSUCRASE PRECURSOR STREPTOCOCCUS  31– 155– 314– MUTANS65 189 369 PSACQ_BACLI SACQ REGULATORY FACTOR BACILLUS  2– LICHENIFORMIS46 PSACT_BACSU SACPA OPERON BACILLUS 102– 189– ANTITERMINATOR SUBTILIS129 216 PSAGP_STRPY STREPTOCOCCAL ACID STREPTOCOCCUS 294– 362–GLYCOPROTEIN PYOGENES 331 389 PSAOX_BACSN SARCOSINE OXIDASE BACILLUS SP350– 377 PSAS2_CLOBI SPORE PROTEIN CLOSTRIDIUM  17– BIFERMENTANS 47PSASG_BACCE SPORE PROTEIN BACILLUS  31– GAMMA-TYPE CEREUS 58 PSASG_BACSTSPORE PROTEIN BACILLUS  37– GAMMA-TYPE STEAROTHERMOPHILUS 64 PSBCC_ECOLIEXONUCLEASE SBCC ESCHERICHIA 218– 337– 535– 622– 778– 821– 915– COLI 260364 585 656 812 865 942 PSBCD_ECOLI EXONUCLEASE SBCD ESCHERICHIA 137–334– COLI 164 397 PSBM_ECOLI SBM PROTEIN ESCHERICHIA  5– 436– 553– COLI32 470 580 PSBP_BACSU SBP PROTEIN BACILLUS  28– SUBTILIS 55 PSCPA_STRPYC5A PEPTIDASE PRECURSOR STREPTOCOCCUS 126– 784– 831– PYOGENES 160 811880 PSCRB_KLEPN SUCROSE-6-PHOSPHATE KLEBSIELLA 174– HYDROLASE PNEUMONIAE201 PSCRB_LACLA SUCROSE-6-PHOSPHATE LACTOCOCCUS 182– 354– 395– HYDROLASELACTIS 217 385 422 PSCRB_STRMU SUCROSE-6-PHOSPHATE STREPTOCOCCUS 335–HYDROLASE MUTANS 362 PSCRX_SALTH FRUCTOKINASE SALMONELLA  97– THOMPSON124 PSCRK_SALTY FRUCTOKINASE SALMONELLA 183– TYPHIMURIUM 210 PSCRY_KLEPNSUCROSE PORIN PRECURSOR KLEBSIELLA  61– 240– PNEUMONIAE 88 267PSCRY_SALTY SUCROSE PORIN PRECURSOR SALMONELLA  16– 61– 240– TYPHIMURIUM54 88 267 PSECA_BACSU PREPROTEIN TRANSLOCASE BACILLUS  12– 226– SECASUBUNIT SUBTILIS 39 260 PSECA_ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIA360– 453– SECA SUBUNIT COLI 387 481 PSECB_ECOLI PROTEIN-EXPORT PROTEINESCHERICHIA  41– SECB COLI 68 PSECD_ECOLI PROTEIN-EXPORT MEMBRANEESCHERICHIA  46– 378– PROTEIN SECD COLI 73 412 PSECF_ECOLIPROTEIN-EXPORT MEMBRANE ESCHERICHIA 174– PROTEIN SECF COLI 201PSECY_ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIA 101– SECY SUBUNIT COLI128 PSECY_LACLA PREPROTEIN TRANSLOCASE LACTOCOCCUS 403– SECY SUBUNITLACTIS 430 PSECY_METVA PREPROTEIN TRANSLOCASE METHANOCOCCUS 131– 396–SECY SUBUNIT VANNIELII 161 423 PSECY_STACA PREPROTEIN TRANSLOCASESTAPHYLOCOCCUS 149– SECY SUBUNIT CARNOSUS 191 PSEFC_SALEN SEFC PROTEINPRECURSOR SALMONELLA 137– 475– ENTERITIDIS 164 535 PSERA_BACSUD-3-PHOSPHOGLYCERATE BACILLUS  16– 347– DEHYDROGENASE SUBTILIS 43 374PSFAA_ECOLI S-FIMBRIAL PROTEIN ESCHERICHIA  11– SUBUNIT PRECURSOR COLI38 PSFSA_ECOLI SUGAR FERMENTATION ESCHERICHIA  81– STIMULATION PROTEINCOLI 115 PSFUA_SERMA IRON-TRANSPORT SFUA SERRATIA  34– PROTEIN PRECURSORMARCESCENS 61 PSHU1_ECOLI SHUFFLON PROTEIN A′ ESCHERICHIA 224– COLI 262PSHU2_ECOLI SHUFFLON PROTEIN A ESCHERICHIA 224– COLI 262 PSHU3_ECOLISHUFFLON PROTEIN B′ ESCHERICHIA 224– COLI 262 PSHU4_ECOLI SHUFFLONPROTEIN B′ ESCHERICHIA 224– COLI 262 PSHU5_ECOLI SHUFFLON PROTEIN CESCHERICHIA 224– 402– COLI 262 429 PSHU6_ECOLI SHUFFLON PROTEIN CESCHERICHIA 224– COLI 262 PSHU7_ECOLI SHUFFLON PROTEIN D′ ESCHERICHIA224– COLI 262 PSINR_BACLI SINR PROTEIN BACILLUS  9– 43– LICHENIFORMIS 3680 PSINR_BACSU SINR PROTEIN BACILLUS  9– 43– SUBTILIS 36 70 PSLAP_ACEKICELL SURFACE PROTEIN ACETOGENIUM 237– 282– 313– 458– 517– 563– 641– 726–PRECURSOR KIVUI 264 309 453 489 544 593 685 753 PSLPA_ECOLI PROPHAGECP4-57 ESCHERICHIA  93– INTEGRASE COLI 136 PSMF_ECOLI SMF PROTEINESCHERICHIA  24– COLI 51 PSMPB_ECOLI SMALL PROTEIN B ESCHERICHIA  27–90– COLI 61 117 PSMP_ECOLI SMP PROTEIN PRECURSOR ESCHERICHIA  71– COLI98 PSMTB_SYNP7 TRANSCRIPTIONAL SYNECHOCOCCUS SP  62– REPRESSOR SMTB 96PSODF_COXBU SUPEROXIDE DISMUTASE COXIELLA 116– BURNETII 143 PSODF_ECOLISUPEROXIDE DISMUTASE ESCHERICHIA 115– COLI 142 PSODF_METTH SUPEROXIDEDISMUTASE METHANOBACTERIUM  25– THERMOAUTOTROPHICU 52 PSODF_PHOLESUPEROXIDE DISMUTASE PHOTOBACTERIUM  22– LEIOGNATHI 63 PSODM_PROFRSUPEROXIDE DISMUTASE PROPIONIBACTERIUM 164– FREUDENREICHII 191PSOHB_ECOLI SOHB PROTEIN PRECURSOR ESCHERICHIA  7– 70– 273– COLI 48 97300 PSOPB_ECOLI SOPB PROTEIN ESCHERICHIA 252– COLI 279 PSOXR_ECOLI SOXRPROTEIN ESCHERICHIA  16– COLI 63 PSPO1_BACSU STAGE 0 SPORULATIONBACILLUS 131– PROTEIN J SUBTILIS 158 PSP2A_BACME STAGE II SPORULATIONBACILLUS  19– PROTEIN AA MEGATERIUM 53 PSP2A_BACSU STAGE II SPORULATIONBACILLUS  21– PROTEIN AA SUBTILIS 55 PSP2B_BACLI STAGE II SPORULATIONBACILLUS  42– PROTEIN AB LICHENIFORMIS 69 PSP2B_BACME STAGE IISPORULATION BACILLUS  36– PROTEIN AB MEGATERIUM 73 PSP2D_BACSU STAGE IISPORULATION BACILLUS 134– PROTEIN D SUBTILIS 161 PSP2G_BACTK POSSIBLEASPARTYL BACILLUS  4– 117– PROTEASE THURINGIENSIS 36 144 PSP2J_BACSUSTAGE II SPORULATION BACILLUS  14– 463– PROTEIN J SUBTILIS 44 500PSP3D_BACSU STAGE III SPORULATION BACILLUS  9– 52– PROTEIN D SUBTILIS 3686 PSP3J_BACSU STAGE III SPORULATION BACILLUS  44– PROTEIN J PRECURSORSUBTILIS 75 PSP4A_BACSU STAGE IV SPORULATION BACILLUS 139– PROTEIN ASUBTILIS 180 PSP4B_BACSU STAGE IV SPORULATION BACILLUS  39– PROTEIN BSUBTILIS 66 PSP4G_BACSU STAGE IV SPORULATION BACILLUS 251– PROTEIN FBSUBTILIS 278 PSP5A_BACSU STAGE V SPORULATION BACILLUS  9– PROTEIN AFSUBTILIS 36 PSPAA_STRDO ANTIGEN I STREPTOCOCCUS 184– DOWNEI 218PSPAB_BACSU SUBTILIN BIOSYNTHESIS BACILLUS 181– 117 KD PROTEIN SUBTILIS208 PSPAC_BACSU SUBTILIN BIOSYNTHESIS BACILLUS 311– PROTEIN SPACSUBTILIS 338 PSPAK_BACSU SENSOR PROTEIN 5PAK BACILLUS  80– 224– 290–SUBTILIS 107 251 324 PSPAP_STRMU CELL SURFACE ANTIGEN STREPTOCOCCUS 122–281– 538– 576– 1071– 1155– 1377– I/II PRECURSOR MUTANS 276 465 565 6301098 1182 1430 PSPAA_BACSU REGULATORY PROTEIN BACILLUS  4– 172– SUBTILIS31 199 PSPAT_BACSU SUBTILIN TRANSPORT BACILLUS  55– 226– PROTEIN SPATSUBTILIS 82 267 PSPEC_STRPY EXOTOXIN TYPE C STREPTOCOCCUS  12– PRECURSORPYOGENES 39 PSPIR_SPICI SPIRALIN SPIROPLASMA 82– 155– CITRI 109 182PSPIR_SPIME SPIRALIN SPIROPLASMA 195– MELLIFERUM 222 PSPOT_ECOLIGUAN-3′,5′- ESCHERICHIA 637– BIS(DIPHOS)3′- COLI 664 PYROPHOSPHOHYDROLAPSPPA_ECOLI PROTEASE IV ESCHERICHIA 278– COLI 305 PSQHC_ZYMMOSQUALENE-HOPENE CYCLASE ZYMOMONAS 590– MOBILIS 617 PSRFA_BACSU SURFACTINSYNTHETASE BACILLUS 159– 244– SUBUNIT A SUBTILIS 186 271 PSRP5_ECOLISIGNAL RECOGNITION ESCHERICHIA 301– PARTICLE PROTEIN COLI 328PSRP5_MYCMY SIGNAL RECOGNITION MYCOPLASMA  21– 107– 394– PARTICLEPROTEIN MYCOIDES 65 141 428 PSSA1_PASHA SEROTYPE-SPECIFIC PASTEURELLA151– 358– 465– 529– 860– ANTIGEN I PRECURSOR HAEMOLYTICA 178 385 518 570904 PSSAB_STRPA ADHESIN B PRECURSOR STREPTOCOCCUS  32– PARASANGUIS 59PSSAB_STRSA ADHESIN B PRECURSOR STREPTOCOCCUS  21– 101– SANGUIS 59 128PSSB_ECOLI SINGLE-STRAND BINDING ESCHERICHIA  68– PROTEIN COLI 95PSSB_PROMI SINGLE-STRAND BINDING PROTEUS  63– PROTEIN MIRABILIS 104PSSB_SERMA SINGLE-STRAND BINDING SERRATIA  63– PROTEIN MARCESCENS 104PSSP5_STRSA AGGLUTININ RECEPTOR STREPTOCOCCUS 131– 178– 295– 565– 676–1081– PRECURSOR SANGUIS 173 287 483 592 710 1131 PSTAV_STRAVSTREPTAVIDIN PRECURSOR STREPTOMYCES 125– AVIDINII 152 PSTA_ECOLISTREPTOTHRICIN ESCHERICHIA  66– ACETYLTRANSFERASE COLI 93 PSTC1_STAAUSTAPHYLOCOAGULASE STAPHYLOCOCCUS  90– 172– 280– PRECURSOR AUREUS 119 199311 PSTC2_STAAU STAPHYLOCOAGULASE STAPHYLOCOCCUS  90– 264– PRECURSORAUREUS 117 291 PSTC_CLOBE L-TRANSD TRANSC CONTROL CLOSTRIDIUM  47–PROTEIN BEIJERINCKII 74 PSTPA_ECOLI STPA PROTEIN ESCHERICHIA  36– COLI63 PSTR1_STRGR INOSAMINE-PHOSPHATE STREPTOMYCES 183– AMIDINOTRANSFERASEI GRISEUS 210 PSTRP_STREQ STREPTOKINASE C PRECURSOR STREPTOCOCCUS 209–281– EQUISIMILIS 236 308 PSTRP_STRPY STREPTOKINASE A PRECURSORSTREPTOCOCCUS 209– PYOGENES 236 PSTRP_STRSP STREPTOKINASE G PRECURSORSTREPTOCOCCUS SP 209– 281– 236 308 PSUBE_BACSU MINOR EXTRACELLULARBACILLUS 435– 522– 605– PROTEASE EPR PREC SUBTILIS 462 563 639PSUBF_BACSU BACILLOPEPTIDASE F BACILLUS  40– 89– 121– 554– PRECURSORSUBTILIS 67 116 148 597 PSUBI_SALTY SULFATE-BINDING PROTEIN SALMONELLA 37– TYPHIMURIUM 74 PSUBI_SYNP7 SULFATE-BINDING PROTEIN SYNECHOCOCCUS SP 63– PRECURSOR 94 PSUBI_SYNY3 SULFATE-BINDING PROTEIN SYNECHOCYSTIS SP 64– PRECURSOR 91 PSUBT_BACLI SUBTILISIN CARLSBERG BACILLUS 191–PRECURSOR LICHENIFORMIS 222 PSUBT_BACMS SUBTILISIN BACILLUS  91–MESENTERICUS 118 PSUBT_BACS9 SUBTILISIN PRECURSOR BACILLUS SP  36– 250–63 277 PSUBT_BACSA SUBTILISIN BACILLUS 197– AMYLOSACCHARITICUS SUBTILIS224 PRECURSOR PSUBT_BACSD SUBTILISIN BACILLUS  86– SUBTILIS 117PSUBT_BACST SUBTILISIN J PRECURSOR BACILLUS 197– STEAROTHERMOPHILUS 224PSUBT_BACSU SUBTILISIN E PRECURSOR BACILLUS 197– SUBTILIS 224PSUBV_BACSU MINOR EXTRACELLULAR BACILLUS  55– 613– 741– PROTEASE VPRPRECUR SUBTILIS 108 654 768 PSUCC_ECOLI SUCCINYL-COA SYNTHETASEESCHERICHIA  62– BETA COLI 89 PSUCP_AGRVI SUCROSE PHOSPHORYLASEAGROBACTERIUM 449– VITIS 476 PSULA_ENTAE CELL DIVISION INHIBITORENTEROBACTER 112– AEROGENES 139 PSYA_ECOLI ALANYL-TRNA SYNTHETASEESCHERICHIA 257– 725– 790– COLI 287 752 821 PSYD_ECOLI ASPARTYL-TRNASYNTHETASE ESCHERICHIA 330– COLI 357 PSYE_BACST GLUTAMYL-TRNA SYNTHETASEBACILLUS  49– STEAROTHERMOPHILUS 76 PSYE_BACSU GLUTAMYL-TRNA SYNTHETASEBACILLUS  49– 351– SUBTILIS 76 386 PSYE_THETH GLUTAMYL-TRNA SYNTHETASETHERMUS 405– AQUATICUS 432 PSYFA_BACSU PHENYLALANYL-TRNA BACILLUS  7–SYNTHETASE A CHAIN SUBTILIS 34 PSYFB_BACSU PHENYLALANYL-TRNA BACILLUS340– 407– SYNTHETASE BETA CHAIN SUBTILIS 367 441 PSYFB_ECOLIPHENYLALANYL-TRNA ESCHERICHIA 546– 607– 744– SYNTHETASE BETA CHAIN COLI573 634 771 PSYGB_ECOLI GLYCYL-TRNA SYNTHETASE ESCHERICHIA 354– 487–BETA CHAIN COLI 381 514 PSYH_STREQ HISTIDYL-TRNA SYNTHETASESTREPTOCOCCUS 376– EQUISIMILIS 403 PSYI_METTH ISOLEUCYL-TRNA SYNTHETASEMETHANOBACTERIUM 1010–  THERMOAUTOTROPHICU 1037 PSYK1_ECOLI LYSYL-TRNASYNTHETASE ESCHERICHIA 283– COLI 310 PSYK2_ECOLI LYSYL-TRNA SYNTHETASEESCHERICHIA  45– 283– HEAT INDUCIBLE COLI 72 310 PSYL_ECOLI LEUCYL-TRNASYNTHETASE ESCHERICHIA 220– COLI 247 PSYM_BACST METHIONYL-TRNA BACILLUS 69– SYNTHETASE STEAROTHERMOPHILUS 99 PSYM_ECOLI METHIONYL-TRNAESCHERICHIA  87– SYNTHETASE COLI 124 PSYP_ECOLI PROLYL-TRNA SYNTHETASEESCHERICHIA 541– COLI 563 PSYQ_ECOLI GLUTAMINYL-TRNA ESCHERICHIA 394–SYNTHETASE COLI 421 PSYRD_PSESY SYRD PROTEIN PSEUDOMONAS 449– SYRINGAE483 PSYR_ECOLI ARGINYL-TRNA SYNTHETASE ESCHERICHIA 540– COLI 574PSYTI_BACSU THREONYL-TRNA BACILLUS 401– 605– SYNTHETASE SUBTILIS 428 639PSYV_BACST VALYL-TRNA SYNTHETASE BACILLUS 603– 809– STEAROTHERMOPHILUS630 843 PSYV_ECOLI VALYL-TRNA SYNTHETASE ESCHERICHIA 300– 882– 924– COLI327 912 951 PSYW_BACST TRYPTOPHANYL-TRNA BACILLUS 204– 239– SYNTHETASESTEAROTHERMOPHILUS 231 266 PSYY1_BACSU TYROSYL-TRNA BACILLUS  81– 375–SYNTHETASE 1 SUBTILIS 115 409 PSYY2_BACSU TYROSYL-TRNA BACILLUS  69–SYNTHETASE 2 SUBTILIS 96 PSYY_BACCA TYROSYL-TRNA SYNTHETASE BACILLUS295– 372– CALDOTENAX 322 416 PSYY_BACST TYROSYL-TRNA SYNTHETASE BACILLUS295– 372– STEAROTHERMOPHILUS 322 416 PT1M1_ECOLI ENZYME ECOR124/3 I MESCHERICHIA 126– 405– 485– PROTEIN COLI 167 432 512 PT1R1_ECOLI ENZYMEECOR124/3 R ESCHERICHIA  30– 624– 702– 768– 843– 966– PROTEIN COLI 57651 736 795 870 1000 PT1R_ECOLI ENZYME ECOK I R PROTEIN ESCHERICHIA 158–COLI 263 PT1S1_ECOLI ENZYME ECOR124/3 I ESCHERICHIA 154– SPECIFICITYPROTEIN COLI 181 PT1SA_ECOLI ENZYME ECOA I SPECIFICITY ESCHERICHIA 279–PROTEIN COLI 306 PT1SB_ECOLI ENZYME ECOB I SPECIFICITY ESCHERICHIA 278–PROTEIN COLI 312 PT1SD_ECOLI ENZYME ECOD I SPECIFICITY ESCHERICHIA 249–PROTEIN COLI 283 PT1SE_ECOLI ENZYME ECOE I SPECIFICITY ESCHERICHIA 279–PROTEIN COLI 306 PT1S_SALPO ENZYME SPECIFICITY PROTEIN SALMONELLA 396–POTSDAM 423 PT1S_SALTY ENZYME SPECIFICITY PROTEIN SALMONELLA 194– 276–402– TYPHIMURIUM 221 304 429 PT257_ECOLI TYPE IIS RESTRICTIONESCHERICHIA 138– 265– 406– 639– 687– 926– ENZYME ECO571 COLI 196 295 440682 728 954 PT2A1_ACICA TYPE II RESTRICTION ACINETOBACTER  49– ENZYMEACC1 CALCOACETICUS 76 PT2BF_BACSU TYPE II RESTRICTION BACILLUS  3– 135–236– ENZYME BSUFI SUBTILIS 43 223 280 PT2BR_BACSU TYPE II RESTRICTIONBACILLUS  3– 338– 401– 532– ENZYME BSUR1 SUBTILIS 45 384 430 559PT2C1_CITFR TYPE II RESTRICTION CITROBACTER  35– ENZYME CFRBI FREUNDII62 PT2C1_HERAU TYPE II RESTRICTION HERPETOSIPHON 176– ENZYME HGICIAURANTIACUS 215 PT2C2_HERAU TYPE II RESTRICTION HERPETOSIPHON 243–ENZYME HGICII AURANTIACUS 273 PT2D1_DESDN TYPE II RESTRICTIONDESULFOVIBRIO  85– ENZYME DDEI DESULFURICANS 122 PT2D1_STRPN TYPE IIRESTRICTION STREPTOCOCCUS 213– ENZYME DPNI PNEUMONIAE 240 PT2E1_ECOLITYPE II RESTRICTION ESCHERICHIA  2– ENZYME ECORI COLI 29 PT2E2_ECOLITYPE II RESTRICTION ESCHERICHIA 333– ENZYME ECORII COLI 360 PT2E5_ECOLITYPE II RESTRICTION ESCHERICHIA 128– 214– ENZYME ECORV COLI 155 241PT2F1_FLAOK TYPE IIS RESTRICTION FLAVOBACTERIUM 302– ENZYME FOKIOKEANOKOITES 336 PT2H1_HAEIN TYPE II RESTRICTION HAEMOPHILUS  6– 69–ENZYME HINFI INFLUENZAE 38 96 PT2H1_HAEPA TYPE II RESTRICTIONHAEMOPHILUS  77– ENZYME HPAI PARAINFLUENZAE 125 PT2H2_HAEHA TYPE IIRESTRICTION HAEMOPHILUS  23– ENZYME HHAII HAEMOLYTICUS 50 PT2H2_HAEINTYPE II RESTRICTION HAEMOPHILUS  97– ENZYME HINCII INFLUENZAE 138PT2K1_KLEPN TYPE II RESTRICTION KLEBSIELLA  18– 178– ENZYME KPNIPNEUMONIAE 45 205 PT2M1_MORBO TYPE II RESTRICTION MORAXELLA  15– 187–225– ENZYME MBOI BOVIS 61 215 252 PT2M2_MORBO TYPE IIS RESTRICTIONMORAXELLA  3– 158– 337– ENZYME MBOII BOVIS 30 185 364 PT2MZ_METTFPOSSIBLE TYPE II METHANOBACTERIUM 105– RESTRICTION THERMOFORMICICUM 151ENZYME MTHZI PT2NG_NEIGO TYPE II RESTRICTION NEISSERIA 117– 231– ENZYMENGOPII GONORRHOEAE 144 258 PT2S1_STRSA TYPE II RESTRICTION STREPTOCOCCUS 5– 41– 395– ENZYME STSI SANGUIS 32 68 446 PT2S2_SHISO TYPE IIRESTRICTION SHIGELLA 206– 258– ENZYME SSOII SONNEI 243 288 PT2S3_STAAUTYPE II RESTRICTION STAPHYLOCOCCUS  70– ENZYME SAU3AI AUREUS 102PT2SI_SALIN TYPE II RESTRICTION SALMONELLA 144– ENZYME SINI INFANTIS 181PT2SM_SERMA TYPE II RESTRICTION SERRATIA  61– ENZYME SMAI MARCESCENS 88PT2TA_THEAQ TYPE II RESTRICTION THERMUS 147– 203– ENZYME TAQI AQUATICUS181 237 PT3MO_ECOLI SYSTEM ECOP15 ESCHERICHIA  37– 75– 236– 378– ENZYMEMOD COLI 71 102 296 405 PT3RE_BACCE SYSTEM ENZYME RES BACILLUS  62– 256–CEREUS 89 283 PTA47_TREPA 47 KD MEMBRANE ANTIGEN TREPONEMA  26–PRECURSOR PALLIDUM 53 PTA53_TREDE 53 KD MEMBRANE ANTIGEN TREPONEMA  99–298– A PRECURSOR DENTICOLA 126 329 PTACY_BACAL ALVEOLYSIN PRECURSORBACILLUS 272– 374– ALVEI 302 401 PTACY_CLOPE PERFRINGOLYSIN 0CLOSTRIDIUM 270– 372– PRECURSOR PERFRINGENS 311 434 PTACY_LISIVIVANOLYSIN PRECURSOR LISTERIA  93– 167– 396– IVANOVII 120 195 423PTACY_LISMO LISTERIOLYSIN 0 LISTERIA 98– 168– 295– 397– PRECURSORMONOCYTOGENES 125 196 329 424 PTACY_LISSE SEELIGERIOLYSIN LISTERIA 99–296– 349– 398– PRECURSOR SEELIGERI 126 323 376 463 PTACY_STRPNPNEUMOLYSIN STREPTOCOCCUS 234– PNEUMONIAE 272 PTACY_STRPY STREPTOLYSIN 0STREPTOCOCCUS  86– 355– 440– PRECURSOR PYOGENES 133 382 470 PTAGB_BACSUTECHOIC ACID BIOSYN BACILLUS  42– PROTEIN B PREC SUBTILIS 69 PTAGC_BACSUTECHOIC ACID BACILLUS 348– BIOSYNTHESIS SUBTILIS 375 PROTEIN CPTAGE_BACSU TECHOIC ACID BACILLUS  59– 144– 185– 565– 600– BIOSYNTHESISSUBTILIS 93 181 243 592 627 PROTEIN E PTAGF_BACSU TECHOIC ACID BACILLUS182– BIOSYNTHESIS SUBTILIS 209 PROTEIN F PTBP1_NEIGO TRANSFERRIN-BINDINGNEISSERIA  39– 137– 398– 810– PROTEIN I PRECURSOR GONORRHOEAE 73 164 425841 PTBUD_PSEPI PHENOL 2-MONOOXYGENASE PSEUDOMONAS  38– 227– 375–PICKETTII 65 254 402 PTCDT_SALTY TRANSCRIPTIONAL SALMONELLA 105–REGULATORY TYPHIMURIUM 132 PROTEIN TCDT PTCPC_VIBCH MEMBRANE PROTEINTCPC VIBRIO  20– 83– 199– 263– 344– 459– PRECURSOR CHOLERAE 47 128 233290 375 486 PTCPE_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO  24– 77– PROTEINTCPE CHOLERAE 59 111 PTCPF_VIBCH TCP PILUS SECRETION VIBRIO  32– 211–PROTEIN TCPF CHOLERAE 66 238 PTCPH_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO 95– PROTEIN TCPH CHOLERAE 122 PTCPI_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO 25– 234– 279– 346– PROTEIN TCP1 CHOLERAE 52 261 306 379 PTCPN_VIBCH TCPPILUS VIRULENCE VIBRIO  48– REGULATORY PROTEIN CHOLERAE 75 PTCPO_VIBCHTCP PILUS BIOSYNTHESIS VIBRIO 230– PROTEIN TCPO CHOLERAE 257 PTCPY_VIBCHTCP PILUS BIOSYNTHESIS VIBRIO 121– PROTEIN TCPY CHOLERAE 148 PTCPZ_VIBCHTCP PILUS BIOSYNTHESIS VIBRIO  44– PROTEIN TCPZ CHOLERAE 85 PTCR2_BACSUTETRACYCLINE RESISTANCE BACILLUS 404– PROTEIN SUBTILIS 434 PTCR_BACSTTETRACYCLINE RESISTANCE BACILLUS 422– PROTEIN STEAROTHERMOPHILUS 453PTCR_STAAU TETRACYCLINE RESISTANCE STAPHYLOCOCCUS 404– PROTEIN AUREUS431 PTCR_STRAG TETRACYCLINE RESISTANCE STREPTOCOCCUS 422– PROTEINAGALACTIAE 453 PTCR_STRPN TETRACYCLINE RESISTANCE STREPTOCOCCUS 422–PROTEIN PNEUMONIAE 453 PTDCA_ECOLI TDCABC OPERON ESCHERICHIA 210–TRANSCRIPTIONAL COLI 239 ACTIVATOR PTDCC_ECOLI TDCC PROTEIN ESCHERICHIA334– COLI 361 PTEE6_STRPY TRYPSIN-RESIST SURFACE STREPTOCOCCUS 137– 361–400– T6 PROTEIN PREC PYOGENES 164 395 437 PTER2_ECOLI TETRACYCLINEREPRESSOR ESCHERICHIA  8– PROTEIN CLASS B COLI 36 PTER4_ECOLITETRACYCLINE REPRESSOR ESCHERICHIA 183– PROTEIN CLASS D COLI 210PTERA_ALCSP TELLURIUM RESISTANCE ALCALIGENES SP  48– PROTEIN TERA 86PTESB_ECOLI ACYL-COA THIOESTERASE II ESCHERICHIA  4– COLI 31 PTET5_ENTFATETRACYCLINE RESISTANCE ENTEROCOCCUS  2– 130– 179– 217– PROTEIN TETMFAECALIS 36 159 206 244 PTET9_ENTFA TETRACYCLINE RESISTANCE ENTEROCOCCUS 2– 130– 217– 260– PROTEIN TETM FAECALIS 36 159 244 287 PTETC_ECOLITRANSPOSON TN10 TETC ESCHERICHIA  72– 116– PROTEIN COLI 106 158PTETM_STRLI TETRACYCLINE RESISTANCE STREPTOMYCES  82– PROTEIN LIVIDANS109 PTETM_UREUR TETRACYCLINE RESISTANCE UREAPLASMA  2– 130– 217– 260–PROTEIN TETM UREALYTICUM 36 159 244 287 PTETO_CAMCO TETRACYCLINERESISTANCE CAMPYLOBACTER  2– PROTEIN TETO COLI 29 PTETO_CAMJETETRACYCLINE RESISTANCE CAMPYLOBACTER  2– PROTEIN TETO JEJUNI 36PTETO_STRMU TETRACYCLINE RESISTANCE STREPTOCOCCUS  2– PROTEIN TETOMUTANS 29 PTETX_BACFR TETRACYCLINE RESISTANCE BACTEROIDES  35– PROTEINFRAGILIS 62 PTETX_CLOTE TETANUS TOXIN PRECURSOR CLOSTRIDIUM 274– 540–615– 692– 985– 1240– TETANI 304 567 642 719 1012 1277 PTF2B_PYRWO TRANSINITIATION FACTOR PYROCOCCUS 218– HB HOMOLOG WOESEI 258 PTFDC_ALCEUCHLOROCATECHOL 1,2- ALCALIGENES  2– DIOXYGENASE EUTROPHUS 33 PTGT_ECOLIQUEUINE TRNA- ESCHERICHIA 173– RIBOSYLTRANSFERASE COLI 200 PTHD1_LACLATHREONINE DEHYDRATASE LACTOCOCCUS 267– BIOSYNTHETIC LACTIS 303PTHD2_ECOLI THREONINE DEHYDRATASE ESCHERICHIA 293– CATABOLIC COLI 320PTHDF_BACSU FURAN OXIDATION PROTEIN BACILLUS 153– 192– 282– 391– THDFSUBTILIS 180 226 316 418 PTHDF_ECOLI FURAN OXIDATION PROTEIN ESCHERICHIA226– 404– THDF COLI 260 431 PTHDF_PSEPU FURAN OXIDATION PROTEINPSEUDOMONAS 226– THDF PUTIDA 260 PTHER_BACCE THERMOLYSIN BACILLUS  4–240– CEREUS 38 267 PTHER_BACST THERMOLYSIN PRECURSOR BACILLUS  45–STEAROTHERMOPHILUS 72 PTHER_BACTH THERMOLYSIN BACILLUS  86–THERMOPROTEOLYTICUS 113 PTHET_THEVU THERMITASE THERMOACTINOMYCES 131–VULGARIS 161 PTHIC_ECOLI THIC PROTEIN ESCHERICHIA 232– 301– COLI 263 328PTHIG_ECOLI THIG PROTEIN ESCHERICHIA 138– COLI 165 PTHPS_SULACTHERMOPSIN PRECURSOR SULFOLOBUS 135– 199– ACIDOCALDARIUS 172 233PTHRC_BRELA THREONINE SYNTHASE BREVIBACTERIUM 288– LACTOFERMENTUM 315PTHTR_SACER PUTATIVE THIOSULFATE SACCHAROPOLYSPORA  69–SULFURTRANSFERASE ERYTHRAEA 96 PTIG_ECOLI TRIGGER FACTOR ESCHERICHIA141– COLI 171 PTMPA_TREPA TREPONEMAL MEMBRANE TREPONEMA 236– PROTEIN APRECURSOR PALLIDUM 266 PTMPB_TREPA TREPONEMAL MEMBRANE TREPONEMA  44–PROTEIN B PRECURSOR PALLIDUM 71 PTMPB_TREPH TREPONEMAL MEMBRANETREPONEMA  41– PROTEIN B PRECURSOR PHAGEDENIS 68 PTNAB_ECOLI LOWAFFINITY TRYPTOPHAN ESCHERICHIA  74– PERMEASE COLI 108 PTNP4_STAAUTRANSPOSASE STAPHYLOCOCCUS  52– 322– AUREUS 79 349 PTNP7_ENTFATRANSPOSON TN917 ENTEROCOCCUS  59– 111– RESOLVASE FAECALIS 97 138PTNPA_STAAU TRANSPOSASE A STAPHYLOCOCCUS 151– AUREUS 178 PTNPB_STAAUTRANSPOSASE B STAPHYLOCOCCUS 589– AUREUS 625 PTNPI_BACTU TNP I RESOLVASEBACILLUS  7– 65– 174– THURINGIENSIS 62 92 201 PTNSB_ECOLI TRANSPOSON TN7ESCHERICHIA  99– 510– TRANSPOSITION PROTEIN COLI 126 537 TNSBPTNSC_ECOLI TRANSPOSON TN7 ESCHERICHIA  32– 314– TRANSPOSITION PROTEINCOLI 59 341 TNSC PTNSD_ECOLI TRANSPOSON TN7 ESCHERICHIA 339–TRANSPOSITION PROTEIN COLI 366 TNSD PTNSE_ECOLI TRANSPOSON TN7ESCHERICHIA 463– TRANSPOSITION PROTEIN COLI 490 TNSE PTOD1_PSEPU TOLUENE1,2-DIOXYGENASE PSEUDOMONAS  36– ALPHA SUBUNIT PUTIDA 63 PTOD2_PSEPUTOLUENE 1,2-DIOXYGENASE PSEUDOMONAS 119– BETA SUBUNIT PUTIDA 153PTODA_PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS 179– SYSTEM PUTIDA 213PTODJ_PSEPU TODF PRODUCT HYDRATASE PSEUDOMONAS 143– PUTIDA 170PTOLA_ECOLI TOLA PROTEIN ESCHERICHIA 101– COLI 138 PTOLC_ECOLI OUTERMEMBRANE PROTEIN ESCHERICHIA 144– 184– 239– 348– 383– TOLC PRECURSORCOLI 178 211 266 375 443 PTOP1_SYNP7 DNA TOPOISOMERASE 1 SYNECHOCOCCUSSP 203– 230 PTORA_ECOLI TRIMETHYLAMINE-N-OXIDE ESCHERICHIA 797–REDUCTASE COLI 824 PTOX1_BORPE PERTUSSIS TOXIN SUBUNIT 1 BORDETELLA 179–(S1) PRECURSOR PERTUSSIS 206 PTOX2_BORPE PERTUSSIS TOXIN SUBUNIT 2BORDETELLA  58– (S2) PRECURSOR PERTUSSIS 85 PTOXA_CLODI TOXIN ACLOSTRIDIUM  20– 99– 204– 342– 373– 847– 966– 997– 1348– DIFFICILE 88159 231 369 414 962 994 1024 1402 PTOXA_PSEAE EXOTOXIN A PRECURSORPSEUDOMONAS 470– AERUGINOSA 497 PTOXB_CLODI TOXIN B CLOSTRIDIUM  38–133– 199– 825– 923– 1334– 1403– 1506– 1716– DIFFICILE 72 163 241 869 9501388 1433 1565 1747 PTOXS_VIBCH TRANSMEMBRANE REGULATORY VIBRIO  13–PROTEIN TOXS CHOLERAE 40 PTPF1_TREPA ANTIGEN TPF1 TREPONEMA 106–PALLIDUM 143 PTPIS_ECOLI TRIOSEPHOSPHATE ISOMERASE ESCHERICHIA  83– COLI110 PTPIS_MORSP TRIOSEPHOSPHATE ISOMERASE MORAXELLA SP 139– 166PTPR_PORGI THIOL PROTEASE PRECURSOR PORPHYROMONAS 117– GINGIVALIS 144PTR2M_AGRT3 TRYPTOPHAN 2- AGROBACTERIUM 239– 501– MONOOXYGENASETUMEFACIENS 266 529 PTR2M_AGRT4 TRYPTOPHAN 2- AGROBACTERIUM 239– 501–MONOOXYGENASE TUMEFACIENS 266 529 PTR2M_PSESS TRYPTOPHAN 2- PSEUDOMONAS 41– MONOOXYGENASE SYRINGAE 68 PTRA1_STAAU TRANSPOSASE STAPHYLOCOCCUS 58– AUREUS 113 PTRA2_STAAU TRANSPOSASE STAPHYLOCOCCUS  11– 58– AUREUS38 113 PTRA3_ECOLI TRANSPOSASE ESCHERICHIA 721– COLI 755 PTRA3_RHIMETRANSPOSASE RHIZOBIUM 179– MELILOTI 206 PTRA3_STAAU TRANSPOSASESTAPHYLOCOCCUS  33– 68– AUREUS 60 95 PTRA4_ECOLI TRANSPOSASE ESCHERICHIA181– 308– 720– COLI 208 340 754 PTRA6_ECOLI TRANSPOSASE ESCHERICHIA  51–COLI 78 PTRA6_SHISO TRANSPOSASE SHIGELLA  51– 200– 231– SONNEI 78 227258 PTRA7_ECOLI TRANSPOSASE ESCHERICHIA 729– COLI 756 PTRA9_MYCTUPUTATIVE TRANSPOSASE MYCOBACTERIUM 159– TUBERCULOSIS 186 PTRAB_BACTBIS231B PROBABLE BACILLUS 281– 419– TRANSPOSASE THURINGIENSIS 308 446PTRAC_BACTB IS231C PROBABLE BACILLUS 281– 419– TRANSPOSASE THURINGIENSIS308 446 PTRAC_STAAU TRANSPOSASE STAPHYLOCOCCUS  4–  45– AUREUS 31 72PTRAX_BACTB IS231 PROBABLE BACILLUS 281– 419– TRANSPOSASE THURINGIENSIS308 446 PTRA_BACTU TRANSPOSASE BACILLUS  93– 509– THURINGIENSIS 127 539PTRA_PSEAE TRANSPOSASE PSEUDOMONAS 127– 721– AERUGINOSA 154 755PTRB1_ECOLI TRAB PROTEIN ESCHERICHIA 113– COLI 143 PTRBF_ECOLI TRBFPROTEIN ESCHERICHIA  12– COLI 39 PTRB1_ECOLI TRBI PROTEIN ESCHERICHIA 70– COLI 97 PTRC1_ECOLI TRAC-1 PROTEIN ESCHERICHIA 1006–  COLI 1058PTRC2_ECOLI TRAC-2 PROTEIN ESCHERICHIA 1102–  COLI 1149 PTRC3_ECOLITRAC-3 PROTEIN ESCHERICHIA 884– COLI 931 PTRD1_ECOLI TRAD PROTEINESCHERICHIA 297– COLI 348 PTREA_ECOLI PERIPLASMIC TREHALASE ESCHERICHIA362– 477– PRECURSOR COLI 403 508 PTREC_ECOLI AMYLOTREHALASE ESCHERICHIA280– COLI 307 PTRFA_ECOLI TRFA TRANSCRIPTIONAL ESCHERICHIA  5– 105–REPRESSOR PROTEIN COLI 32 132 PTRG1_ECOLI TRAG PROTEIN ESCHERICHIA  61–630– 831– 865– COLI 88 657 858 895 PTRG5_ECOLI TRAG PROTEIN ESCHERICHIA196– COLI 223 PTRG6_ECOLI TRAG PROTEIN ESCHERICHIA 195– 518– COLI 222545 PTR11_ECOLI TRAI PROTEIN ESCHERICHIA 155– 597– 887– 1350– COLI 209624 914 1377 PTR12_ECOLI TRAI PROTEIN ESCHERICHIA 155– 597– 887– 1350–COLI 209 624 914 1377 PTR15_ECOLI TRAI PROTEIN ESCHERICHIA  47– 328–COLI 74 371 PTR14_ECOLI TRAJ PROTEIN ESCHERICHIA  36– COLI 63PTRM8_ECOLI TRAM PROTEIN ESCHERICHIA  5– COLI 32 PTRMA_ECOLI TRNA(URACIL-5-)- ESCHERICHIA 107– METHYLTRANSFERASE COLI 137 PTRMD_ECOLITRNA (GUANINE-N1)- ESCHERICHIA 115– 226– METHYLTRANSFERASE COLI 142 253PTRPA_BACSU TRYPTOPHAN SYNTHASE BACILLUS 220– ALPHA CHAIN SUBTILIS 247PTRPA_CAUCR TRYPTOPHAN SYNTHASE CAULOBACTER 241– ALPHA CHAIN CRESCENTUS275 PTRPA_PSEAE TRYPTOPHAN SYNTHASE PSEUDOMONAS 176– ALPHA CHAINAERUGINOSA 203 PTRPB_ACICA TRYPTOPHAN SYNTHASE ACINETOBACTER  79– BETACHAIN CALCOACETICUS 113 PTRPB_BACSU TRYPTOPHAN SYNTHASE BACILLUS  76–318– BETA CHAIN SUBTILIS 103 345 PTRPB_BRELA TRYPTOPHAN SYNTHASEBREVIBACTERIUM 172– BETA CHAIN LACTOFERMENTUM 199 PTRPB_LACCA TRYPTOPHANSYNTHASE LACTOBACILLUS  83– BETA CHAIN CASEI 117 PTRPB_LACLA TRYPTOPHANSYNTHASE LACTOCOCCUS  77– 164– BETA CHAIN LACTIS 104 191 PTRPB_VIBPATRYPTOPHAN SYNTHASE VIBRIO  56– BETA CHAIN PARAHAEMOLYTICUS 83PTRPC_BRELA INDOLE-3-GLYCEROL BREVIBACTERIUM 229– PHOSPHATE SYNTHASELACTOFERMENTUM 256 PTRPC_ECOLI INDOLE-3-GLYCEROL ESCHERICHIA 205–PHOSPHATE SYNTHASE COLI 232 PTRPC_LACLA INDOLE-3-GLYCEROL LACTOCOCCUS148– PHOSPHATE SYNTHASE LACTIS 175 PTRPC_VIBPA INDOLE-3-GLYCEROL VIBRIO346– PHOSPHATE SYNTHASE PARAHAEMOLYTICUS 376 PTRPD_ACICA ANTHRANILATEACINETOBACTER 223– 260– PHOSPHORIBOSYL- CALCOACETICUS 250 294TRANSFERASE PTRPD_PSEAE ANTHRANILATE PSEUDOMONAS 205– PHOSPHORIBOSYL-AERUGINOSA 232 TRANSFERASE PTRPD_PSEPU ANTHRANILATE PSEUDOMONAS 205–PHOSPHORIBOSYL- PUTIDA 232 TRANSFERASE PTRPD_VIBPA ANTHRANILATE VIBRIO 2– PHOSPHORIBOSYL- PARAHAEMOLYTICUS 29 TRANSFERASE PTRPE_BACPUANTHRANILATE SYNTHASE BACILLUS  33– COMPONENT I PUMILUS 60 PTRPE_CLOTMANTHRANILATE SYNTHASE CLOSTRIDIUM 165– COMPONENT I THERMOCELLUM 226PTRPE_LACLA ANTHRANILATE SYNTHASE LACTOCOCCUS 142– COMPONENT I LACTIS191 PTRPE_LEPB1 ANTHRANILATE SYNTHASE LEPTOSPIRA 145– COMPONENT IBIFLEXA 179 PTRPE_RHIME ANTHRANILATE SYNTHASE RHIZOBIUM 139– MELILOTI166 PTRPE_SALTY ANTHRANILATE SYNTHASE SALMONELLA 191– COMPONENT ITYPHIMURIUM 218 PTRPE_SULSO ANTHRANILATE SYNTHASE SULFOLOBUS 143– 298–COMPONENT I SOLFATARICUS 183 328 PTRPE_VIBPA ANTHRANILATE SYNTHASEVIBRIO  9– 54– COMPONENT I PARAHAEMOLYTICUS 36 81 PTRPG_ACICAANTHRANILATE SYNTHASE ACINETOBACTER  12– COMPONENT II CALCOACETICUS 39PTRPG_AZOUN ANTHRANILATE SYNTHASE AZOSPIRILLUM  4– COMPONENT IIBRASILENSE 31 PTRPG_ECOLI ANTHRANILATE SYNTHASE ESCHERICHIA  5–COMPONENT II COLI 32 PTRPG_LACLY ANTHRANILATE SYNTHASE LACTOCOCCUS  4–COMPONENT II LACTIS 31 PTRPG_PSEAL ANTHRANILATE SYNTHASE PSEUDOMONAS 12– COMPONENT II AERUGINOSA 39 PTRPG_SALTY ANTHRANILATE SYNTHASESALMONELLA  5– COMPONENT II TYPHIMURIUM 32 PTRPG_SERMA ANTHRANILATESYNTHASE SERRATIA  9– COMPONENT II MARCESCENS 43 PTRPG_SHIDYANTHRANILATE SYNTHASE SHIGELLA  5– COMPONENT II DYSENTERIAE 32PTRPO_PSEAE PUTATIVE PSEUDOMONAS 147– TRANSCRIPTIONAL AERUGINOSA 174REGULATOR PTRS2_ECOLI TRAS PROTEIN ESCHERICHIA  85– COLI 119 PTRT3_ECOLIRESISTANCE PROTEIN ESCHERICHIA 184– PRECURSOR COLI 221 PTRY1_SALTY TRAYPROTEIN SALMONELLA  30– TYPHIMURIUM 57 PTRYP_STRGR TRYPSIN PRECURSORSTREPTOMYCES  80– GRISEUS 107 PTSR_STRAZ RRNA METHYLTRANSFERASESTREPTOMYCES 126– AZUREUS 153 PTSST_STAAU TOXIC SHOCK SYNDROMESTAPHYLOCOCCUS  29– 102– TOXIN-1 PRECURSOR AUREUS 63 129 PTSX_ECOLICHANNEL-FORMING PROTEIN ESCHERICHIA 225– TSX PRECURSOR COLI 252PTTK_ECOLI HYPOTHETICAL 24.3 KD ESCHERICHIA  81– PROTEIN COLI 115PTUS_ECOLI SITE-BINDING PROTEIN ESCHERICHIA  57– 107– COLI 91 134PTYCA_BACBR TYROCIDINE SYNTHETASE 1 BACILLUS 117– 534– 1019– BREVIS 147561 1051 PTYF1_TREPE ANTIGEN TYF1 TREPONEMA 106– PERTENUE 143PTYRA_BACSU POSSIBLE PREPHENATE BACILLUS 244– 312– DEHYDROGENASESUBTILIS 271 342 PTYRA_ECOLI CHORISMATE MUTASE ESCHERICHIA 329– COLI 370PTYRR_ECOLI TRANSCRIPTIONAL ESCHERICHIA 483– REGULATORY COLI 510 PROTEINTYRR PTYSY_LACCA THYMIDYLATE SYNTHASE LACTOBACILLUS 139– CASEI 173PTYSY_LACLA THYMIDYLATE SYNTHASE LACTOCOCCUS  75– LACTIS 109 PTYSY_STAAUTHYMIDYLATE SYNTHASE STAPHYLOCOCCUS  69– AUREUS 96 PUHPB_ECOLI SENSORPROTEIN UHPB ESCHERICHIA 276– 316– COLI 303 343 PUHPB_SALTY SENSORPROTEIN UHPB SALMONELLA 276– 316– TYPHIMURIUM 303 343 PUMUC_SALTY UMUCPROTEIN SALMONELLA 204– TYPHIMURIUM 231 PUPP_ECOLI URACIL ESCHERICHIA 30– PHOSPHORIBOSYL- COLI 57 TRANSFERASE PURAA_ECOLI URACIL PERMEASEESCHERICHIA 350– COLI 384 PURE1_HELPY UREASE ALPHA SUBUNIT HELICOBACTER 15– PYLORI 42 PURE1_PROMI UREASE ALPHA SUBUNIT PROTEUS  72– MIRABILIS99 PURE1_PROVU UREASE ALPHA SUBUNIT PROTEUS  72– VULGARIS 99 PURE1_UREURUREASE ALPHA SUBUNIT UREAPLASMA  13– 483– UREALYTICUM 40 517 PURE2_HELPYUREASE BETA SUBUNIT HELICOBACTER  62– PYLORI 99 PURED_HELPY UREASEOPERON URED HELICOBACTER  17– PROTEIN PYLORI 44 PUREE_PROM1 UREASEACCESSORY PROTEIN PROTEUS  57– UREE MIRABILIS 84 PUREF_KLEAE UREASEACCESSORY PROTEIN KLEBSIELLA  20– UREF PRECURSOR AEROGENES 47PUS45_LACLA SECRETED 45 KD PROTEIN LACTOCOCCUS  44– 150– 276– PRECURSORLACTIS 98 223 303 PUSHA_ECOLI P-SUGAR HYDROLASE ESCHERICHIA  56–PRECURSOR COLI 83 PUSHA_SALTY SILENT PROTEIN USHA(0) SALMONELLA  56–PRECURSOR TYPHIMURIUM 83 PUVRA_ECOLI EXCINUCLEASE ABC ESCHERICHIA 527–871– SUBUNIT A COLI 554 898 PUVRA_MICLU EXCINUCLEASE ABC MICROCOCCUS579– 619– 684– 922– SUBUNIT A LUTEUS 606 646 718 949 PUVRA_PARDEEXCINUCLEASE ABC PARACOCCUS  33– SUBUNIT A DENITRIFICANS 60 PUVRC_BACSUEXCINUCLEASE ABC BACILLUS 342– 511– SUBUNIT C SUBTILIS 372 538PUVRC_ECOLI EXCINUCLEASE ABC ESCHERICHIA  37– 332– SUBUNIT C COLI 64 362PUVRD_ECOLI HELICASE II ESCHERICHIA 280– COLI 307 PVANA_ENTFC VANCOMYCINRESISTANCE ENTEROCOCCUS 182– PROTEIN VANA FAECIUM 209 PVANC_ENTGAVANCOMYCIN RESISTANCE ENTEROCOCCUS 177– PROTEIN VANC GALLINARUM 211PVIB4_AGRT5 VIRB4 PROTEIN AGROBACTERIUM 138– PRECURSOR TUMEFACIENS 172PV1B6_AGRT5 VIRB6 PROTEIN AGROBACTERIUM 190– TUMEFACIENS 227 PVIB6_AGRT6VIRB6 PROTEIN AGROBACTERIUM 190– TUMEFACIENS 227 PVIB6_AGRT9 VIRB6PROTEIN AGROBACTERIUM 190– TUMEFACIENS 227 PVIBX_AGRT5 VIRB10 PROTEINAGROBACTERIUM  32– 212– TUMEFACIENS 59 239 PVIBX_AGRT6 VIRB10 PROTEINAGROBACTERIUM  32– 211– TUMEFACIENS 59 238 PVIBX_AGRT9 VIRB10 PROTEINAGROBACTERIUM  32– 212– TUMEFACIENS 59 239 PVIC1_AGRRA VIRC1 PROTEINAGROBACTERIUM  81– RHIZOGENES 108 TUMEFACIENS PVIC1_AGRT5 VIRC1 PROTEINAGROBACTERIUM  81– TUMEFACIENS 108 PVIC1_AGRT6 VIRC1 PROTEINAGROBACTERIUM  81– TUMEFACIENS 108 PVID3_AGRRA VIRD3 PROTEINAGROBACTERIUM 149– 265– RHIZOGENES 176 292 PVIRA_AGRTS WIDE HOST RANGE(WHR) AGROBACTERIUM  42– 113– 657– VIRA PROTEIN TUMEFACIENS 76 147 684PVIRA_AGRT6 WIDE HOST RANGE (WHR) AGROBACTERIUM  42– 84– 653– VIRAPROTEIN TUMEFACIENS 69 125 680 PVIRA_AGRT9 WIDE HOST RANGE (WHR)AGROBACTERIUM  42– 84– 653– VIRA PROTEIN TUMEFACIENS 69 125 680PVIRB_SHIPL VIRB TRANSCRIPTIONAL SHIGELLA 37– 107– 187– 252– ACTIVATORFLEXNERI 71 134 214 291 PVIRF_YEREN VIRULENCE REGULON YERSINIA  16–TRANSACTIVATOR ENTEROCOLITICA 46 PVIRG_AGRRA VIRG REGULATORY PROTEINAGROBACTERIUM  34– RHIZOGENES 61 PVIRL_AGRT6 LIMITED HOST RANGE (LHR)AGROBACTERIUM 106– VIRA PROTEIN TUMEFACIENS 157 PVISC_ECOLI VISC PROTEINESCHERICHIA  47– COLI 74 PVLPA_MYCHR VARIANT SURFACE ANTIGEN MYCOPLASMA 74– A PRECURSOR HYORHINIS 112 PVMO3_BORHE OUTER MEMBRANE BORRELIA  54–LIPOPROTEIN HERMSII 81 3 PRECURSOR PVM07_BORHE OUTER MEMBRANE BORRELIA332– LIPOPROTEIN HERMSII 359 7 PRECURSOR PVM21_BORHE OUTER MEMBRANEBORRELIA 330– LIPOPROTEIN HERMSII 357 21 PRECURSOR PVM24_BORHE OUTERMEMBRANE BORRELIA  47– LIPOPROTEIN HERMSII 143 24 PRECURSOR PVM25_BORHEOUTER MEMBRANE BORRELIA 315– LIPOPROTEIN HERMSII 356 25 PRECURSORPVNFA_AZOV1 NITROGEN FIXATION AZOTOBACTER 158– 218– PROTEIN VNFAVINELANDII 188 245 PVNFK_AZOCH NITROGENASE AZOTOBACTER  68–VANADIUM-IRON CHROOCOCCUM 95 PROTEIN MC 1 PVNFK_AZOV1 NITROGENASEAZOTOBACTER  68– 372– VANADIUM-IRON VINELANDII 95 403 PROTEINPVRP2_SALCH 65 KD VIRULENCE PROTEIN SALMONELLA 509– CHOLERAE-SUIS 536PVRP2_SALDU 65 KD VIRULENCE PROTEIN SALMONELLA 511– DUBLIN 538PVSDE_SALDU VIRULENCE PROTEIN VSDE SALMONELLA  3– DUBLIN 36 PVVHB_VIBVUCYTOLYSIN SECRETION VIBRIO  30– PROTEIN VULNIFICUS 75 PWAPA_STRMUWALL-ASSOCIATED PROTEIN STREPTOCOCCUS  4– 313– PRECURSOR MUTANS 41 386PWRBA_ECOLI TRP REPRESSOR BINDING ESCHERICHIA  89– PROTEIN COLI 116PX191_ECOLI X POLYPEPTIDE ESCHERICHIA 104– COLI 131 PX192_ECOLI XPOLYPEPTIDE ESCHERICHIA 104– COLI 131 PX193_ECOLI X POLYPEPTIDEESCHERICHIA 104– COLI 131 PXISA_ANASP EXCISASE A ANABAENA SP  4– 89–135– 31 116 162 PXPRB_ECOLI POSSIBLE INTEGRASE/ ESCHERICHIA 268–RECOMBINASE XPRB COLI 295 PXYLA_STAXY XYLOSE ISOMERASE STAPHYLOCOCCUS411– XYLOSUS 438 PXYLK_KLEAE XYLULOSE KINASE KLEBSIELLA  2– AEROGENES 29PXYLK_LACPE XYLULOSE KINASE LACTOBACILLUS  52– 211– 260– PENTOSUS 79 238287 PXYLK_STAXY XYLULOSE KINASE STAPHYLOCOCCUS  4– 96– 209– 246– XYLOSUS31 130 236 273 PXYLR_BACSU XYLOSE REPRESSOR BACILLUS  75– 260– SUBTILIS102 287 PXYLR_LACPE XYLOSE REPRESSOR LACTOBACILLUS 262– PENTOSUS 289PXYLR_STAXY XYLOSE REPRESSOR STAPHYLOCOCCUS  20– 101– 181– 221– 274–XYLOSUS 64 158 215 255 301 PXYLZ_PSEPU ELECTRON TRANSFER PSEUDOMONAS 51– 104– COMPONENT PUTIDA 78 131 PXYN4_CALSA PUTATIVE ENDO-1,4-BETA-CALDOCELLUM 198– XYLANASE SACCHAROLYTICUM 225 PXYNA_BACCIO-1,4-BETA-XYLANASE BACILLUS  47– PRECURSOR CIRCULANS 74 PXYNA_BACSSENDO-1,4-BETA-XYLANASE BACILLUS SP 173– PRECURSOR 200 PXYNA_BACSUENDO-1,4-BETA-XYLANASE BACILLUS  47– PRECURSOR SUBTILIS 74 PXYNA_CALSAENDO-1,4-BETA-XYLANASE A CALDOCELLUM 132– 226– PRECURSOR SACCHAROLYTICUM159 256 PXYNA_PSEFL ENDO-1,4-BETA-XYLANASE PSEUDOMONAS  33– PRECURSORFLUORESCENS 82 PXYNB_BACPU BETA-XYLOSIDASE BACILLUS 459– PUMILUS 486PXYNB_CALSA BETA-XYLOSIDASE CALDOCELLUM 440– SACCHAROLYTICUM 474PXYNB_PSEFL ENDO-1,4-BETA-XYLANASE PSEUDOMONAS  51– 251– 317– 475–PRECURSOR FLUORESCENS 78 278 344 502 PXYNC_PSEFL ALPHA-L-ARABINOFURANO-PSEUDOMONAS  51– 251– SIDASE C PRECURSOR FLUORESCENS 78 278 PXYNC_STRLIENDO-1,4-BETA-XYLANASE C STREPTOMYCES 183– PRECURSOR LIVIDANS 210PY14K_HALMO HYPOTHETICAL 14.9 KD HALOCOCCUS  56– PROTEIN MORRHUAE 83PY23K_STROR HYPOTHETICAL 23.1 KD STREPTOCOCCUS  78– PROTEIN ORALIS 105PY36K_METSM HYPOTHETICAL 36.7 KD METHANOBREVIBACTER 128– 172– PROTEINSMITHII 162 218 PYAAC_ECOLI HYPOTHETICAL 34.6 KD ESCHERICHIA 271–PROTEIN COLI 298 PYAAC_PSEFL HYPOTHETICAL 33.9 KD PSEUDOMONAS 274–PROTEIN FLUORESCENS 301 PYAAM_ECOLI HYPOTHETICAL 59.1 KD ESCHERICHIA 45– PROTEIN COLI 72 PYAAP_ECOLI HYPOTHETICAL 56.6 KD ESCHERICHIA 352–PROTEIN COLI 379 PYAAQ_ECOLI HYPOTHETICAL 28.5 KD ESCHERICHIA 155–PROTEIN COLI 182 PYABC_ECOLI HYPOTHETICAL 34.9 KD ESCHERICHIA 131–PROTEIN COLI 158 PYABG_ECOLI HYPOTHETICAL 89.7 KD ESCHERICHIA 446– 627–PROTEIN COLI 480 654 PYABN_ECOLI HYPOTHETICAL 63.9 KD ESCHERICHIA 428–PROTEIN COLI 455 PYAC3_PSEAE HYPOTHETICAL 23.9 KD PSEUDOMONAS  48– 150–PROTEIN AERUGINOSA 75 177 PYAD2_CLOAB HYPOTHETICAL 21.6 KD CLOSTRIDIUM 75– 114– PROTEIN ACETOBUTYLICUM 109 144 PYAD5_CLOAB HYPOTHETICAL 36.9KD CLOSTRIDIUM 132– 165– 210– PROTEIN ACETOBUTYLICUM 159 196 237PYAD6_CLOAB HYPOTHETICAL PROTEIN CLOSTRIDIUM  21– ACETOBUTYLICUM 55PYADA_YEREN INVASIN PRECURSOR YERSINIA 196– 247– 318– ENTEROCOLITICA 230274 381 PYADA_YERPS INVASIN PRECURSOR YERSINIA 255– 297–PSEUDOTUBERCULOSIS 282 360 PYADC_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA 13– 101– COLI 40 131 PYAEA_RICRI 17 KD PROTEIN RICKETTSIA 107–RICKETTSII 134 PYAFB_ECOLI HYPOTHETICAL 29.4 KD ESCHERICHIA 221– PROTEINCOLI 248 PYAFD_ECOLI HYPOTHETICAL 29.1 KD ESCHERICHIA  34– PROTEIN COLI71 PYAFE_ECOLI HYPOTHETICAL 23.0 KD ESCHERICHIA 123– PROTEIN COLI 150PYAIB_ESCFE HYPOTHETICAL PROTEIN ESCHERICHIA  2– FERGUSONII 35PYAM1_SALTY PUTATIVE AMIDASE SALMONELLA  73– TYPHIMURIUM 100 PYAT1_SYNY3HYPOTHETICAL 13.0 KD SYNECHOCYSTIS SP  26– PROTEIN 60 PYATP_MYCLE HYPOPROTEIN PUTATIVE MYCOBACTERIUM  23– 91– 511– ATP OPERON LEPRAE 57 158538 PYATR_BACFI HYPOL ATP-BINDING BACILLUS 211– TRANSPORT PROTEIN FIRMUS238 PYATS_MYCGA HYPOTHETICAL PROTEIN MYCOPLASMA  7– GALLISEPTICUM 41PYATU_MYCGA HYPOTHETICAL PROTEIN MYCOPLASMA  29– 60– GALLISEPTICUM 56 87PYAV5_XANCV HYPOTHETICAL 50 KD XANTHOMONAS  68– 199– AVIRULENCE PROTEINCAMPESTRIS 98 226 PYBAH_ECOLI HYPOTHETICAL 24.8 KD ESCHERICHIA  49–PROTEIN COLI 79 PYBBA_ECOLI HYPOTHETICAL ABC ESCHERICHIA  6– TRANSPORTERCOLI 69 PYBED_ECOLI HYPOTHETICAL 9.8 KD ESCHERICHIA  51– PROTEIN COLI 82PYBID_ECOLI HYPOTHETICAL 14.1 KD ESCHERICHIA  97– PROTEIN COLI 124PYCAE_ECOLI HYPOTHETICAL 24.5 KD ESCHERICHIA  34– PROTEIN COLI 61PYCBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA  38– COLI 65 PYCBL_BACUNHYPOTHETICAL 17.3 KD BACTEROIDES  66– PROTEIN UNIFORMIS 100 PYCEA_BACLAHYPOTHETICAL PROTEIN BACILLUS 111– LAUTUS 138 PYCFC_ECOLI HYPOTHETICAL22.9 KD ESCHERICHIA  52– PROTEIN COLI 79 PYCHR_ALCEU HYPOTHETICALPROTEIN ALCALIGENES  21– EUTROPHUS 48 PYC1B_ECOLI HYPOTHETICAL 20.8 KDESCHERICHIA  16– PROTEIN COLI 43 PYC1F_ECOLI 18.6 KD PROTEIN ESCHERICHIA7– 134– COLI 68 166 PYC1K_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA  35–COLI 62 PYCL1_ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA  54– PROTEIN COLI81 PYCP3_SYNPY HYPOTHETICAL 29.3 KD SYNECHOCOCCUS SP 194– PROTEIN 221PYCP3_SYNY3 HYPOTHETICAL 28.0 KD SYNECHOCYSTIS SP  7– 120– PROTEIN 34154 PYCP5_SYNY3 HYPOTHETICAL 39.5 KD SYNECHOCYSTIS SP 277– PROTEIN 308PYCPG_MASLA HYPOTHETICAL PROTEIN MASTIGOCLADUS  2– LAMINOSUS 29PYCPY_PSEA9 HYPO PHYCOCYANIN OPERON PSEUDANABAENA SP 380– PROTEIN Y 407PYCR2_BACTK HYPOTHETICAL 29.1 KD BACILLUS  42– 153– PROTEINTHURINGIENSIS 74 180 PYCS5_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA  32–PRECURSOR COLI 59 PYCW5_BACSU HYPOTHETICAL PROTEIN BACILLUS  3– 59–SUBTILIS 30 86 PYD3M_HERAU HYPOTHETICAL 68.4 KD HERPETOSIPHON  12– 151–360– PROTEIN AURANTIACUS 39 178 416 PYDBA_ECOLI HYPOTHETICAL PROTEINESCHERICHIA  32– 117– 163– 233– 295– 458– 676– 1136– 1499– COLI 66 144216 267 329 485 717 1163 1530 PYDBD_ECOLI HYPOTHETICAL PROTEINESCHERICHIA  80– COLI 107 PYDDB_ECOLI HYPOTHETICAL 86.7 KD ESCHERICHIA606– 683– 726– PROTEIN COLI 641 714 753 PYDDC_ECOLI HYPOTHETICAL 80.8 KDESCHERICHIA 373– 421– 621– PROTEIN COLI 400 452 648 PYDDD_ECOLIHYPOTHETICAL 24.1 KD ESCHERICHIA 133– PROTEIN COLI 174 PYDEH_ECOLIHYPOTHETICAL 20.5 KD ESCHERICHIA  96– PROTEIN COLI 130 PYDEJ_ECOLIHYPOTHETICAL 18.3 KD ESCHERICHIA  4– PROTEIN COLI 38 PYDEK_ECOLIHYPOTHETICAL 65.5 KD ESCHERICHIA 333– 524– 565– PROTEIN COLI 360 551 592PYDNN_BORBU HYPOTHETICAL 11.2 KD BORRELIA  6– PROTEIN BURGDORFERI 36PYDO1_SULSO HYPOTHETICAL 14.7 KD SULFOLOBUS  17– 71– PROTEINSOLFATARICUS 58 103 PYDO3_SULSO HYPOTHETICAL 16.9 KD SULFOLOBUS  11–PROTEIN SOLFATARICUS 38 PYEBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA 93– COLI 120 PYEBG_ECOLI HYPOTHETICAL 10.7 KD ESCHERICHIA  50– PROTEINCOLI 77 PYEEE_ECOLI HYPOTHETICAL 38.1 KD ESCHERICHIA  43– PROTEIN COLI70 PYEEF_ECOLI HYPO 49.1 KD TRANSPORT ESCHERICHIA 147– PROTEIN COLI 174PYEGA_ECOLI HYPOTHETICAL IN DCD 3′ ESCHERICHIA 145– REGION COLI 172PYEHA_ECOLI HYPOTHETICAL 36.9 KD ESCHERICHIA  69– 283– PROTEIN COLI 106310 PYEHB_ECOLI HYPOTHETICAL 92.3 KD ESCHERICHIA 151– 501– PROTEIN COLI178 545 PYEHD_ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA  96– PROTEIN COLI123 PYEHF_ECOLI HYPOTHETICAL 141.0 KD ESCHERICHIA 543– PROTEIN COLI 570PYEHI_ECOLI HYPOTHETICAL 138.1 KD ESCHERICHIA  35– 102– PROTEIN COLI 70129 PYEHU_ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA 326– PROTEIN COLI 353PYE1C_ECOLI HYPOTHETICAL 33.6 KD ESCHERICHIA  46– PROTEIN COLI 80PYE1F_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA  61– COLI 88 PYE1J_ECOLIHYPOTHETICAL 43.4 KD ESCHERICHIA  15– PROTEIN COLI 42 PYEJA_ECOLIHYPOTHETICAL ABC ESCHERICHIA  83– TRANSPORTER COLI 110 PYEJF_ECOLIHYPOTHETICAL PROTEIN ESCHERICHIA 453– COLI 480 PYFJO_ECOLI HYPOTHETICAL91.2 KD ESCHERICHIA 399– PROTEIN COLI 433 RYNID_ECOLI HYPOTHETICAL 40.6KD ESCHERICHIA  75– PROTEIN COLI 202 PVFU2_BACST HYPOTHETICAL 30.6 KDBACILLUS 133– PROTEIN STEAROTHERMOPHILUS 160 PYFXX_BRAJA HYPOTHETICALPROTEIN BRADYRHIZOBIUM 109– JAPONICUM 150 PYGAP_BACME HYPOTHETICAL 37.7KD BACILLUS  40– PROTEIN MEGATERIUM 67 PYGFD_ECOLI HYPOTHETICAL 29.4 KDESCHERICHIA 214– PROTEIN COLI 241 PYGGB_ECOLI HYPOTHETICAL 30.9 KDESCHERICHIA 225– PROTEIN COLI 252 PVGGG_ECOLI HYPOTHETICAL 31.8 KDESCHERICHIA 209– PROTEIN COLI 236 PYG12_BACTU HYPOTHETICAL 22.8 KDBACILLUS  26– PROTEIN THURINGIENSIS 61 PYG12_PSEPU HYPOTHETICAL 32.4 KDPSEUDOMONAS 145– PROTEIN PUTIDA 172 PYG1F_ECOLI HYPOTHETICAL 48.4 KDESCHERICHIA 223– PROTEIN COLI 264 PYGL4_BACST HYPOTHETICAL 35.5 KDBACILLUS  6– PROTEIN STEAROTHERMOPHILUS 33 PYGL5_BACST HYPOTHETICALPROTEIN BACILLUS 182– STEAROTHERMOPHILUS 209 PYGLN_BACCE HYPOTHETICAL 15KD BACILLUS  79– PROTEIN CEREUS 124 PYGRD_BACSU HYPOTHETICAL PROTEINBACILLUS  20– SUBTILIS 47 PYGRE_BACSU HYPOTHETICAL 17.1 KD BACILLUS  84–PROTEIN SUBTILIS 111 PYGRP_BACSU HYPOTHETICAL 39.0 KD BACILLUS  98–PROTEIN SUBTILIS 125 PYGRP_CLOAB HYPOTHETICAL 38.8 KD CLOSTRIDIUM 160–PROTEIN ACETOBUTYLICUM 210 PYGT2_STRMU HYPOTHETICAL PROTEIN 2STREPTOCOCCUS  4– 110– 235– MUTANS 40 135 262 PYHAB_ECOLI HYPOTHETICAL20.6 KD ESCHERICHIA  20– PROTEIN COLI 66 PYHAC_ECOLI HYPOTHETICAL 45.2KD ESCHERICHIA  69– PROTEIN COLI 96 PYHAF_ECOLI HYPOTHETICAL PROTEINESCHERICHIA  44– 138– COLI 71 165 PYHBG_ECOLI PROBABLE ABC TRANSPORTERESCHERICHIA 176– COLI 203 PYHBG_PSEPU PROBABLE ABC TRANSPORTERPSEUDOMONAS  74– 106– 147– PUTIDA 101 133 174 PYHBG_THIFE PROBABLE ABCTRANSPORTER THIOBACILLUS 113– FERROOXIDANS 140 PYHDF_ECOLI HYPOTHETICAL55.4 KD ESCHERICHIA 267– PROTEIN COLI 297 PYHEM_BACSU HYPOTHETICAL 32.0KD BACILLUS 222– PROTEIN SUBTILIS 253 PYHET_ANASP HYPOTHETICAL PROTEINANABAENA SP  72– 99 PYHHA_ECOLI HYPOTHETICAL 16.6 KD ESCHERICHIA  56–PROTEIN COLI 84 PYHHG_ECOLI HYPOTHETICAL 15.1 PROTEIN ESCHERICHIA  43–COLI 77 PYHHH_ECOLI HYPOTHETICAL 14.5 KD ESCHERICHIA  43– PROTEIN COLI73 PYH11_LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS 167– LACTIS 194PYH13_LACLA HYPOTHETICAL 38.0 KD LACTOCOCCUS  90– 132– PROTEIN LACTIS124 159 PYH16_LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS  92– PROTEIN LACTIS148 PYH18_LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS  77– 156– PROTEINLACTIS 104 183 PYHLB_STAAU HYPOTHETICAL PROTEIN STAPHYLOCOCCUS  18–AUREUS 67 PYHLB_VIBCH HYPOTHETICAL 18.3 KD VIBRIO  99– PROTEIN CHOLERAE126 PYHMF_METFE HYPOTHETICAL 32.2 KD METHANOTHERMUS 106– PROTEINFERVIDUS 133 PYHSI_CLOAB HYPOTHETICAL 11.0 KD CLOSTRIDIUM  41– PROTEINACETOBUTYLICUM 85 PYHSA_CLOAB HYPOTHETICAL 20.6 KD CLOSTRIDIUM  98–PROTEIN ACETOBUTYLICUM 125 PYHSC_CLOAB HYPOTHETICAL 42.4 KD CLOSTRIDIUM 25– 208– 276– PROTEIN ACETOBUTYLICUM 52 253 310 PYHVE_LACHEHYPOTHETICAL PROTEIN LACTOBACILLUS  93– 127– HELVETICUS 120 154PYHYA_PSESN HYPOTHETICAL PROTEIN PSEUDOMONAS SP 217– 266 PYI11_HALFAHYPOTHETICAL 38.0 KD HALOBACTERIUM 245– PROTEIN HALOBIUM 272 PYI32_MYCLUIS986 HYPOTHETICAL 6.6 MYCOBACTERIUM  19– KD PROTEIN TUBERCULOSIS 46PYI42_PSEAY HYPOTHETICAL 42.6 KD PSEUDOMONAS  9– PROTEIN AMYLODERAMOSA36 PYI48_METSM 1SMI HYPOTHETICAL 48.3 METHANOBREVIBACTER  73– 154– 338–KD PROTEIN SMITHII 100 184 365 PYI52_HALHA HYPOTHETICAL 31 KDHALOBACTERIUM  86– PROTEIN HALOBIUM 113 PYIBB_ECOLI HYPOTHETICAL 34.0 KDESCHERICHIA 202– PROTEIN 1 COLI 239 PY1BD_ECOLI HYPOTHETICAL PROTEINESCHERICHIA  9– COLI 43 PYIBF_ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIA131– PROTEIN COLI 158 PYIBG_ECOLI HYPOTHETICAL 18.1 KD ESCHERICHIA  70–PROTEIN COLI 97 PYICC_ECOLI HYPOTHETICAL 33.2 KD ESCHERICHIA 143–PROTEIN COLI 170 PY1CD_ECOLI HYPOTHETICAL 31.1 KD ESCHERICHIA 132–PROTEIN COLI 159 PYICH_ECOLI HYPOTHETICAL 62.3 KD ESCHERICHIA 408–PROTEIN COLI 435 PYICI_ECOLI HYPOTHETICAL 88.1 KD ESCHERICHIA 122–PROTEIN COLI 149 PYICN_ECOLI HYPOTHETICAL 18.2 KD ESCHERICHIA  76–PROTEIN COLI 103 PYICO_ECOLI HYPOTHETICAL 49.9 KD ESCHERICHIA 320–PROTEIN COLI 347 PYIDB_ECOLI HYPOTHETICAL 13.8 KD ESCHERICHIA  34–PROTEIN COLI 78 PYIDE_ECOLI HYPOTHETICAL 58.9 KD ESCHERICHIA  86– 182–277– PROTEIN COLI 113 209 304 PYIDI_ECOLI HYPOTHETICAL 15.7 KDESCHERICHIA  56– PROTEIN COLI 83 PYIDK_ECOLI HYPOTHETICAL 62.1 KDESCHERICHIA  2– PROTEIN COLI 39 PYIDP_ECOLI HYPOTHETICAL 27.3 KDESCHERICHIA  63– PROTEIN COLI 97 PYIEA_ECOLI HYPOTHETICAL 49.2 KDESCHERICHIA 221– PROTEIN COLI 248 PYJEC_ECOLI HYPOTHETICAL 60.6 KDESCHERICHIA  20– 270– PROTEIN COLI 58 297 PYIEC_ERWCH HYPOTHETICALPROTEIN ERWINIA  22– CHRYSANTHEMI 67 PYIED_ECOLI HYPOTHETICAL 34.8 KDESCHERICHIA  86– PROTEIN COLI 120 PYIEG_ECOLI HYPOTHETICAL 46.9 KDESCHERICHIA 293– PROTEIN COLI 327 PYIEH_ECOLI HYPOTHETICAL 24.7 KDESCHERICHIA  51– PROTEIN COLI 78 PYIEM_ECOLI HYPOTHETICAL 15.0 KDESCHERICHIA  73– PROTEIN COLI 105 PYIEO_ECOLI HYPOTHETICAL 51.5 KDESCHERICHIA 201– 380– PROTEIN COLI 242 407 PYIFC_ECOLI HYPOTHETICAL 39.6KD ESCHERICHIA 175– PROTEIN COLI 202 PYIGI_ECOLI HYPOTHETICAL 14.0 KDESCHERICHIA  51– PROTEIN COLI 92 PYIGM_ECOLI HYPOTHETICAL 33.7 KDESCHERICHIA 120– PROTEIN COLI 154 PYIGN_ECOLI HYPOTHETICAL 54.7 KDESCHERICHIA 207– PROTEIN COLI 234 PYIGO_ECOLI HYPOTHETICAL 28.1 KDESCHERICHIA  67– PROTEIN COLI 94 PYIGP_ECOLI HYPOTHETICAL 22.3 KDESCHERICHIA 173– PROTEIN COLI 200 PYIGT_ECOLI HYPOTHETICAL 27.8 KDESCHERICHIA 132– PROTEIN COLI 159 PYIHB_ECOLI HYPOTHETICAL 21.2 KDESCHERICHIA 13– PROTEIN COLI 40 PYIHD_ECOLI HYPOTHETICAL 10.3 KDESCHERICHIA  28– PROTEIN COLI 55 PYIHF_ECOLI HYPOTHETICAL 54.1 KDESCHERICHIA 272– PROTEIN COLI 306 PYIHI_ECOLI HYPOTHETICAL 19.1 KDESCHERICHIA 112– PROTEIN COLI 139 PYIHK_ECOLI HYPOTHETICAL 65.4 KDESCHERICHIA  4– PROTEIN COLI 31 PYIHM_ECOLI HYPOTHETICAL 36.9 KDESCHERICHIA  83– 120– 297– PROTEIN COLI 110 154 324 PYIHO_ECOLIHYPOTHETICAL 81.8 KD ESCHERICHIA 612– PROTEIN COLI 646 PYIHP_ECOLIHYPOTHETICAL 53.1 KD ESCHERICHIA 357– PROTEIN COLI 384 PYIHV_ECOLIHYPOTHETICAL 31.9 KD ESCHERICHIA  72– PROTEIN COLI 99 PYIHX_ECOLIHYPOTHETICAL 23.5 KD ESCHERICHIA  9– PROTEIN COLI 36 PYIHZ_ECOLIHYPOTHETICAL 15.9 KD ESCHERICHIA  6– PROTEIN COLI 33 PYIIP_ECOLIHYPOTHETICAL 32.9 KD ESCHERICHIA  22– PROTEIN COLI 63 PYIIU_ECOLIHYPOTHETICAL 9.6 KD ESCHERICHIA  28– PROTEIN COLI 71 PYIJC_ECOLIHYPOTHETICAL 26.6 KD ESCHERICHIA 136– PROTEIN COLI 163 PYIJH_ECOLIHYPOTHETICAL 78.3 KD ESCHERICHIA 225– PROTEIN COLI 263 PYIJK_ECOLIHYPOTHETICAL 11.2 KD ESCHERICHIA  26– PROTEIN COLI 53 PYIJO_ECOLIHYPOTHETICAL 32.1 KD ESCHERICHIA 214– PROTEIN COLI 241 PYIJP_ECOLIHYPOTHETICAL 66.6 KD ESCHERICHIA 110– 419– PROTEIN COLI 137 446PYINL_LISMO HYPOTHETICAL 26.8 KD LISTERIA  7– PROTEIN MONOCYTOGENES 34PYIS1_SHISO INSERTION ELEMENT IS600 SHIGELLA  62– SONNEI 89 PYIS1_STRCOIS110 HYPOTHETICAL 43.6 STREPTOMYCES 125– KD PROTEIN COELICOLOR 152PYIS3_SHISO INSERTION ELEMENT IS629 SHIGELLA  66– SONNEI 100 PYISP_BACSPHYPOTHETICAL 42.1 KD BACILLUS SP 312– PROTEIN 339 PYJAG_ECOLIHYPOTHETICAL 22.6 KD ESCHERICHIA  51– PROTEIN COLI 78 PYJAI_ECOLIHYPOTHETICAL 20.4 KD ESCHERICHIA  88– PROTEIN COLI 122 PYJBH_ECOLIHYPOTHETICAL 78.5 KD ESCHERICHIA  93– PROTEIN COLI 120 PYJBL_ECOLIHYPOTHETICAL 9.7 KD ESCHERICHIA  30– PROTEIN COLI 57 PYIBM_ECOLIHYPOTHETICAL 26.7 KD ESCHERICHIA 112– PROTEIN COLI 149 PYJBQ_ECOLIHYPOTHETICAL 15.7 KD ESCHERICHIA  2– PROTEIN COLI 29 PYJCC_ECOLIHYPOTHETICAL 60.8 KD ESCHERICHIA  38– 414– 451– PROTEIN COLI 65 441 492PYJCE_ECOLI HYPOTHETICAL 60.5 KD ESCHERICHIA 454– PROTEIN COLI 481PYJCG_ECOLI HYPOTHETICAL 59.2 KD ESCHERICHIA 394– PROTEIN COLI 421PYJCO_ECOLI HYPOTHETICAL 25.1 KD ESCHERICHIA  91– PROTEIN COLI 118PYJCP_ECOLI HYPOTHETICAL 53.4 KD ESCHERICHIA 242– PROTEIN COLI 269PYJCS_ECOLI HYPOTHETICAL 73.7 KD ESCHERICHIA 366– PROTEIN COLI 396PYJCW_ECOLI HYPOTHETICAL ABC ESCHERICHIA  50– TRANSPORTER COLI 84PYJDA_ECOLI HYPOTHETICAL 84.2 KD ESCHERICHIA  2– 451– PROTEIN COLI 29485 PYJDB_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA 103– COLI 134PYJJA_ECOLI HYPOTHETICAL 17.5 KD ESCHERICHIA  35– 88– PROTEIN PRECURSORCOLI 69 129 PYKAB_BACFI HYPOTHETICAL 48.1 KD BACILLUS 321– PROTEINFIRMUS 355 PYLA1_LACAC HYPOTHETICAL PROTEIN LACTOBACILLUS  47–ACIDOPHILUS 74 PYLA2_LACAC HYPOTHETICAL 14.5 KD LACTOBACILLUS  15–PROTEIN ACIDOPHILUS 42 PYLA3_LACAC HYPOTHETICAL 14.4 KD LACTOBACILLUS 47– PROTEIN ACIDOPHILUS 74 PYLAC_SULSO HYPOTHETICAL 24.4 KD SULFOLOBUS 23– PROTEIN SOLFATARICUS 50 PYLP3_PSEPU HYPOTHETICAL 44.7 KDPSEUDOMONAS 186– 314– PROTEIN PUTIDA 213 341 PYLPA_YEREN YLPALIPOPROTEIN YERSINIA 184– PRECURSOR ENTEROCOLITICA 221 PYLT3_ANAVAHYPOTHETICAL 22.6 KD ANABAENA 172– PROTEIN VARIABILIS 199 PYLUD_LACLAHYPOTHETICAL 29.7 KD LACTOCOCCUS  35– PROTEIN LACTIS 70 PYME2_BACSUHYPOTHETICAL 35.3 KD BACILLUS  52– PROTEIN SUBTILIS 79 PYMG2_MYCGEHYPOTHETICAL 114.4 KD MYCOPLASMA  56– 159– 420– 981– PROTEIN PRECURSORGENITALIUM 83 193 445 1008 PYNGA_CLOPE HYPOTHETICAL PROTEIN CLOSTRIDIUM139– PERFRINGENS 166 PYNGB_CLOPE HYPOTHETICAL 31.2 KD CLOSTRIDIUM  12–63– 182– PROTEIN PERFRINGENS 49 97 211 PYNI1_METTL HYPOTHETICAL PROTEINMETHANOCOCCUS  55– THERMOLITHOTROPHICUS 89 PYNQ1_PARDE HYPOTHETICAL 9.3KD PARACOCCUS  52– PROTEIN DENITRIFICANS 86 PYNT3_ANASP HYPOTHETICAL28.1 KD ANABAENA SP  71– PROTEIN 198 PYNT5_ANASP HYPOTHETICAL PROTEINANABAENA SP  87– 165 PYOHD_ECOLI HYPOTHETICAL 21.4 KD ESCHERICHIA  5–PROTEIN COLI 32 PYOHG_ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA 104– 289–PROTEIN COLI 171 316 PYOJA_ECOLI HYPOTHETICAL 15.0 KD ESCHERICHIA  17–PROTEIN COLI 44 PYOJE_ECOLI HYPOTHETICAL 93.5 KD ESCHERICHIA 221–PROTEIN COLI 248 PYOJF_ECOLI HYPOTHETICAL 9.5 KD ESCHERICHIA  41–PROTEIN COLI 82 PYOJH_ECOLI HYPOTHETICAL 54.3 KD ESCHERICHIA 145–PROTEIN COLI 193 PYOJJ_ECOLI HYPOTHETICAL 36.2 KD ESCHERICHIA  94–PROTEIN COLI 121 PYOM2_PHOS9 HYPOTHETICAL PROTEIN PHOTOBACTERIUM SP  32–IN OMPH 3′REGION 59 PYOPH_YEREN PROTEIN-TYROSINE YERSINIA  63–PHOSPHATASE YOPH ENTEROCOLITICA 105 PYOPH_YERPS PROTEIN-TYROSINEYERSINIA  63– PHOSPHATASE YOPH PSEUDOTUBERCULOSIS 105 PYOPN_YEREN OUTERMEMBRANE YERSINIA  23– 66– 235– PROTEIN YOPN ENTEROCOLITICA 50 93 262PYOPN_YERPS OUTER MEMBRANE YERSINIA  23– 66– 235– PROTEIN YOPNPSEUDOTUBERCULOSIS 50 93 262 PYOPQ_YEREN YOPQ PROTEIN PRECURSOR YERSINIA 61– ENTEROCOLITICA 88 PYORA_HAEIN HYPOTHETICAL 31.5 KD HAEMOPHILUS 147–PROTEIN INFLUENZAE 174 PYORA_LISMO HYPOTHETICAL 25.6 KD LISTERIA  32–PROTEIN MONOCYTOGENES 77 PYORA_PYRWO HYPOTHETICAL 24.7 KD PYROCOCCUS183– PROTEIN WOESEI 210 PYORB_HAEIN HYPOTHETICAL 19.8 KD HAEMOPHILUS 39– PROTEIN INFLUENZAE 66 PYORC_HAEIN HYPOTHETICAL 19.9 KD HAEMOPHILUS 49– PROTEIN INFLUENZAE 79 PYORE_HAEIN 8 KD PROTEIN HAEMOPHILUS  47– 82–INFLUENZAE 74 109 PYORF_HAEIN 26.8 KD PROTEIN HAEMOPHILUS 199–INFLUENZAE 229 PYORH_HAEIN HYPOTHETICAL 13.7 KD HAEMOPHILUS  7– PROTEININFLUENZAE 34 PYORI_HAEIN 95.4 KD PROTEIN HAEMOPHILUS 416– 688–INFLUENZAE 450 722 PYORQ_BACSU HYPOTHETICAL 34 KD BACILLUS 148– PROTEINSUBTILIS 175 PYORX_PYRWO HYPOTHETICAL PROTEIN PYROCOCCUS  66– WOESEI 93PYORZ_LISMO HYPOTHETICAL 16.9 KD LISTERIA  27– PROTEIN MONOCYTOGENES 54PYP15_STAAU HYPOTHETICAL 15.5 KD STAPHYLOCOCCUS  71– 110– PROTEIN AUREUS98 137 PYP23_BASCU HYPOTHETICAL 22.5 KD BACILLUS  57– PROTEIN SUBTILIS84 PYP23_STAAU HYPOTHETICAL 22.2 KD STAPHYLOCOCCUS  29– PROTEIN AUREUS70 PYP2A_STAAU HYPOTHETICAL 26.9 KD STAPHYLOCOCCUS  34– PROTEIN AUREUS104 PYP2B_STAAU HYPOTHETICAL 27.0 KD STAPHYLOCOCCUS  23– 62– 179–PROTEIN AUREUS 60 89 206 PYP2C_STAAU HYPOTHETICAL 27.7 KD STAPHYLOCOCCUS 13– 129– PROTEIN AUREUS 83 176 PYP7_AGRT4 HYPOTHETICAL PROTEIN 7AGROBACTERIUM  29– TUMEFACIENS 56 PYPA2_LEGPN HYPOTHETICAL PROTEINLEGIONELLA  94– PNEUMOPHILA 135 PYPAS_ENTFA HYPOTHETICAL 13 KDENTEROCOCCUS  79– PROTEIN FAECALIS 106 PYPA_BACAN HYPOTHETICAL 21.6 KDBACILLUS  13– 115– PROTEIN ANTHRACIS 47 162 PYPC1_ECOLI HYPOTHETICAL27.6 KD ESCHERICHIA  5– PROTEIN COLI 32 PYPDA_BACSU HYPOTHETICAL 27.3 KDBACILLUS 184– PROTEIN SUBTILIS 222 PYPFT_ECOLI HYPOTHETICAL 12.6 KDESCHERICHIA  6– PROTEIN COLI 43 PYPH1_SYNP2 HYPOTHETICAL 18.1 KDSYNECHOCOCCUS SP  34– PROTEIN 61 PYP16_CLOPE HYPOTHETICAL 19.7 KDCLOSTRIDIUM  7– 43– 83– PROTEIN PERFRINGENS 34 77 149 PYP19_CLOPEHYPOTHETICAL 14.5 KD CLOSTRIDIUM  2– PROTEIN PERFRINGENS 59 PYPIX_CLOPEHYPOTHETICAL 38.4 KD CLOSTRIDIUM 110– 263– 303– PROTEIN PERFRINGENS 137290 340 PYPIY_PSEAE HYPOTHETICAL 38.5 KD PSEUDOMONAS  22– PROTEINAERUGINOSA 52 PYPP_BACSU HYPOTHETICAL PROCESSING BACILLUS 329– PROTEASESUBTILIS 356 PYPQQ_KLEPN HYPOTHETICAL PROTEIN KLEBSIELLA 243– PNEUMONIAE270 PYPS2_PLEBO HYPOTHETICAL 13.1 KD PLECTONEMA  27– PROTEIN BORYANUM 54PYPV1_METTF HYPOTHETICAL 40.7 KD METHANOBACTERIUM  58– 308– PROTEINTHERMOFORMICICUM 85 335 PYPV3_METTF HYPOTHETICAL 22.5 KDMETHANOBACTERIUM  3– PROTEIN THERMOFORMICICUM 30 PYPV7_METTFHYPOTHETICAL 17.3 KD METHANOBACTERIUM  69– PROTEIN THERMOFORMICICUM 117PYPVB_METTF HYPOTHETICAL 49.6 KD METHANOBACTERIUM 333– 389– PROTEINTHERMOFORMICICUM 360 430 PYPYB_BACSU HYPOTHETICAL 72.4 KD BACILLUS 602–PROTEIN SUBTILIS 636 PYPZ1_METTF HYPOTHETICAL 40.6 KD METHANOBACTERIUM 58– 308– PROTEIN THERMOFORMICICUM 85 335 PYPZ2_METTF HYPOTHETICAL 33.1KD METHANOBACTERIUM  38– 154– PROTEIN THERMOFORMICICUM 65 188PYPZ5_METTF HYPOTHETICAL 54.1 KD METHANOBACTERIUM 193– 226– 381– PROTEINTHERMOFORMICICUM 220 253 408 PYPZ7_METTF HYPOTHETICAL 9.7 KDMETHANOBACTERIUM  5– PROTEIN THERMOFORMICICUM 78 PYR18_THEPEHYPOTHETICAL 18.7 KD THERMOFILUM  82– PROTEIN PENDENS 109 PYRB1_HALCUHYPOTHETICAL 40 KD HALOBACTERIUM  20– GTP-BINDING PROTEIN CUTIRUBRUM 51PYREC_SYNP2 HYPOTHETICAL 28.7 KD SYNECHOCOCCUS SP  49– PROTEIN 76PYRF0_SALTY HYPOTHETICAL 40.6 KD SALMONELLA 143– PROTEIN TYPHIMURIUM 190PYRF2_SALTY HYPOTHETICAL 51.0 KD SALMONELLA 428– PROTEIN TYPHIMURIUM 455PYRF5_SALTY HYPOTHETICAL 20.6 KD SALMONELLA  29– PROTEIN TYPHIMURIUM 56PYRF6_SALTY HYPOTHETICAL 36.6 KD SALMONELLA 130– PROTEIN TYPHIMURIUM 157PYRG2_LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS 140– LACTIS 167 PYRL1_METVAHYPOTHETICAL PROTEIN METHANOCOCCUS  40– 129– VANNIELII 93 156PYRP2_METVA HYPOTHETICAL 11.6 KD METHANOCOCCUS  13– PROTEIN VANNIELII 40PYRP2_SULAC HYPOTHETICAL 11.5 KD SULFOLOBUS  5– PROTEIN ACIDOCALDARIUS51 PYRP3_SULAC HYPOTHETICAL 14.5 KD SULFOLOBUS  37– PROTEINACIDOCALDARIUS 71 PYRTP_BACSU HYPOTHETICAL 25.3 KD BACILLUS  29– PROTEINSUBTILIS 56 PYRTS_BACSU HYPOTHETICAL 11.4 KD BACILLUS  3– 44– PROTEINSUBTILIS 30 81 PYSCB_YEREN HYPOTHETICAL YSC OPERON YERSINIA  90– PROTEINB ENTEROCOLITICA 121 PYSCC_YEREN YSC OPERON PROTEIN C YERSINIA  38– 365–PRECURSOR ENTEROCOLITICA 72 399 PYSCD_YEREN YSC OPERON PROTEIN DYERSINIA 242– ENTEROCOLITICA 269 PYSCH_YEREN YSC OPERON PROTEIN HYERSINIA  28– ENTEROCOLITICA 58 PYSCH_YERPS YSC OPERON PROTEIN HYERSINIA  28– PSEUDOTUBERCULOSIS 58 PYSCI_YEREN YSC OPERON PROTEIN IYERSINIA  49– ENTEROCOLITICA 76 PYSCI_YERPS YSC OPERON PROTEIN IYERSINIA  49– PSEUDOTUBERCULOSIS 76 PYSCJ_YEREN YSC OPERON LIPOPROTEINYERSINIA  99– J PRECURSOR ENTEROCOLITICA 126 PYSCJ_YERPS YSC OPERONLIPOPROTEIN YERSINIA  99– J PRECURSOR PSEUDOTUBERCULOSIS 126 PYSCL_YERENYSC OPERON PROTEIN L YERSINIA  41– ENTEROCOLITICA 68 PYSCL_YERPS YSCOPERON PROTEIN L YERSINIA  41– PSEUDOTUBERCULOSIS 68 PYSMA_SERMAHYPOTHETICAL 9.5 KD SERRATIA 141– PROTEIN MARCESCENS 70 PYSO2_DESAMHYPOTHETICAL 21.3 KD DESULFUROLOBUS  68– PROTEIN AMBIVALENS 109PYSO3_DESAM HYPOTHETICAL PROTEIN DESULFUROLOBUS  65– AMBIVALENS 155PYSP2_LEPIN HYPOTHETICAL PROTEIN LEPTOSPIRA  6– 60– INTERROGANS 33 94PYSR1_MYCMY HYPOTHETICAL PROTEIN MYCOPLASMA  35– 185– 300– MYCOIDES 99227 327 PYSY3_BACSU HYPOTHETICAL 19.6 KD BACILLUS  72– PROTEIN SUBTILIS99 PYSYN_METFE HYPOTHETICAL PROTEIN METHANOTHERMUS  78– FERVIDUS 105PYT37_STRFR HYPOTHETICAL 37.1 KD STREPTOMYCES 246– PROTEIN FRADIAE 273PYTDK_BACSU HYPOTHETICAL 35.6 KD BACILLUS 244– 279– PROTEIN SUBTILIS 271306 PYTRE_LEPBI HYPOTHETICAL 22 KD LEPTOSPIRA  84– PROTEIN BIFLEXA 113PYRTP_LACLA HYPOTHETICAL 13.3 KD LACTOCOCCUS  76– PROTEIN LACTIS 112PYTS1_BACSU HYPOTHETICAL 20 KD BACILLUS  37– PROTEIN SUBTILIS 64PYTSF_SP1C1 HYPOTHETICAL 23.8 KD SPIROPLASMA 102– PROTEIN CITRI 149PYX04_BACSU HYPOTHETICAL 12.8 KD BACILLUS  37– 65– PROTEIN SUBTILIS 6495 PYX06_BACSU HYPOTHETICAL 21.0 KD BACILLUS 142– PROTEIN SUBTILIS 169PYX13_BACSU HYPOTHETICAL 26 0 KD BACILLUS  17– PROTEIN SUBTILIS 51PYX15_BACSU HYPOTHETICAL 61.8 KD BACILLUS 165– 262– PROTEIN SUBTILIS 207289 PYX18_BACSU HYPOTHETICAL 66.8 KD BACILLUS  3– 34– 94– PROTEINSUBTILIS 30 61 142 PYXI9_BACSU HYPOTHETICAL 31.3 KD BACILLUS 56– 85–PROTEIN SUBTILIS 83 112 PYX20_BACSU HYPOTHETICAL 23.2 KD BACILLUS 24–PROTEIN SUBTILIS 58 PYX12_ANASP HYPOTHETICAL 18.9 KD ANABAENA SP 77–PROTEIN 104 PYXYB_CALSA HYPOTHETICAL 10.7 KD CALDOCELLUM 9– PROTEINSACCHAROLYTICUM 39 PYXYC_CALSA HYPOTHETICAL PROTEIN CALDOCELLUM 41–SACCHAROLYTICUM 94 PYZE1_ECOLI HYPOTHETICAL 16.7 KD ESCHERICHIA 41–PROTEIN COLI 78

TABLE IX 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL HUMANPROTEINS PCGENE 107x178x4 Motif Search on All Human Protein SequencesFILENAME PROTEIN AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8AREA 9 P143F_HUMAN 14-3-3 PROTEIN ETA (PROTEIN AS1) 101–135 (FRAGMENT).P143S_HUMAN 14-3-3 PROTEIN HOMOLOG STRATIFIN. 45–72 P143T_HUMAN 14-3-3PROTEIN THETA (14-3-3 PROTEIN 61–92 T-CELL) (HS1 PROTEIN). P143Z_HUMAN14-3-3 PROTEIN ZETA (PROTEIN KINASE 28–55 C INHIBITOR PROTEIN-1)(KCIP-1) P1A23_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114A-29 (AW-19) A*2901 ALPHA CHAIN P1A24_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 A-29 (AW-19) A*2902 ALPHA CHAINP1B02_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 B-7 B*0702ALPHA CHAIN I P1B05_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87–114 148–182 B-13 B*1301 ALPHA CHAIN P1B10_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84–115 BW-75 (B-15) B*1502 ALPHA CHAINP1B11_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 BW-72(BW-70) B*1503 ALPHA P1B12_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 76–107 B-62 B*1504 ALPHA CHAIN P1B13_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84–115 B-18 B*1801 ALPHA CHAIN P1B21_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 B-35 B*350I ALPHA CHAINP1B22_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 B-35 B*3502ALPHA CHAIN P1B23_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115B-35 B*3503 ALPHA CHAIN P1B24_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  76–107 B-35 B*3504 ALPHA CHAIN P1B25_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84–115 B-35 B*3505 ALPHA CHAIN P1B26_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 B-35 B*3506 ALPHA CHAINP1B27_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 B-35 B*3507ALPHA CHAIN P1B28_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115B-35 B*3508 ALPHA CHAIN P1B29_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  88–115 B-37 B*3701 ALPHA CHAIN P1B32_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 B-39 B*3902 ALPHA CHAIN P1B33_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 60–91 BW-60 (B-40) B*4001 ALPHACHAIN P1B34_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 B-40B*4002 ALPHA CHAIN P1B35_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84–115 B-40 B*4003 ALPHA CHAIN P1B36_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84–115 B-40 B*4004 ALPHA CHAIN P1B38_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 BW-41 B*4101 ALPHA CHAINP1B39_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 BW-42 B*4201ALPHA CHAIN P1B40_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–111BW-44 (B-12) B*4401 ALPHA CHAIN P1B41_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 BW-44 (B-12) B*4402 ALPHA CHAINP1B42_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 BW-44 (B-12)B*4403 ALPHA CHAIN P1B43_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84–115 BW-45 (B-I2) B*4501 ALPHA CHAIN P1B44_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 BW-46 B*4601 ALPHA CHAIN P1B45_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  88–115 BW-47 B*4701 ALPHA CHAINP1B46_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84–115 B-48 B*4801ALPHA CHAIN P1B47_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114B-49 (B-21) B*4901 ALPHA CHAIN P1B48_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84–115 BW-50 (B-21) B*5001 ALPHA CHAINP1B53_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 BW-52 (B-5)B*5201 ALPHA CHAIN P1B55_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87–114 BW-54 (BW-22) B*5401 ALPHA P1B56_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 BW-55 (BW-22) B*5501 ALPHAP1B57_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 BW-55(BW-22) B*5502 ALPHA P1B58_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87–114 BW-56 (BW-22) B*5601 ALPHA P1B59_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 BW-56 (BW-22) B*5602 ALPHAP1C01_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 CW-1 CW*0101ALPHA CHAIN P1C02_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114CW-1 CW*0102 ALPHA CHAIN P1C03_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  87–114 CW-2 CW*0201 ALPHA CHAIN P1C04_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 CW-2 CW*0202 ALPHA CHAIN P1C06_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 CW-3 CW*0302 ALPHA CHAINP1C12_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114 CW-8 CW*0801ALPHA CHAIN P1C13_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87–114CW-8 CW*0802 ALPHA CHAIN P1C14_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  87–114 CW-8 CW*0803 ALPHA CHAIN P1C17_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87–114 CW*1401 ALPHA CHAIN PRECURSORP25A6_HUMAN 69/71 KD (2′–5′) 593–620 OLIGOADENYLATE SYNTHETASEP2AAA_HUMAN PROTEIN PHOSPHATASE PP2A. 65 KD 12–49 54–81 REGULATORYSUBUNIT, ALPHA ISOFORM P2AAB_HUMAN PROTEIN PHOSPHATASE PP2A, 65 KD  9–3641–68  79–106 REGULATORY SUBUNIT. BETA ISOFORM P2ABA_HUMAN PROTEINPHOSPHATASE PP2A, 55 KD 177–218 REGULATORY SUBUNIT, ALPHA ISOFORMP411_HUMAN ERYTHROID PROTEIN 4.1 (BAND 4.1, 32–66 ERYTHROCYTE FORM).P412_HUMAN NON-ERYTHROID PROTEIN 4.1 (BAND 4.1,  3–30 708–735 LYMPHOIDFORM). P42_HUMAN ERYTHROCYTE MEMBRANE PROTEIN BAND 4.2. 173–200 518–545P4F2_HUMAN 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN 281–322 (4F2HC)(LYMPHOCYTE ACTIVATION P5H1E_HUMAN 5-HYDROXYTRYPTAMINE 1E RECEPTOR311–338 (5-HT-1E) (SEROTONIN RECEPTOR) P5H1F_HUMAN 5-HYDROXYTRYPTAMINE1F RECEPTOR 222–253 (5-HT-1F) (SEROTONIN RECEPTOR) P5H2A_HUMAN5-HYDROXYTRYPTAMINE 2A RECEPTOR 22–56 (5-HT-2A) (SEROTONIN RECEPTOR)P5H7_HUMAN 5-HYDROXYTRYPTAMINE 7 RECEPTOR 72–99 (5-HT-7) (S-HT-X)(SEROTONIN RECEPTOR) PA1AC_HUMAN ALPHA-1-ANTICHYMOTRYPSIN PRECURSOR 98–132 330–357 (ACT). PA1AG_HUMAN ALPHA-1-ACID GLYCOPROTEIN 1  92–119PRECURSOR (OROSOMUCOID) (OMD) PA1AT_HUMAN ALPHA-1-ANTITRYPSIN PRECURSOR168–202 (ALPHA-1 PROTEASE INHIBITOR) (ALPHA-1- PA1AU_HUMANALPHA-1-ANTITRYPSIN-RELATED 163–197 PROTEIN PRECURSOR. PA2AP_HUMANALPHA-2-ANTIPLASMIN PRECURSOR 191–218 365–395 (ALPHA-2-PLASMININHIBITOR) (ALPHA-2- PA2GL_HUMAN LEUCINE-RICH ALPHA-2-GLYCOPROTEIN104–134 (LRG). PA2MG_HUMAN ALPHA-2-MACROGLOBULIN PRECURSOR 53–80 319–3491085–1112 1402–1429 (ALPHA-2-M) PA4_HUMAN ALZHEIMER'S DISEASE AMYLOID A4428–455 PROTEIN PRECURSOR (PROTEASE NEXIN-II) PAACT_HUMAN ALPHA-ACTININ(F-ACTIN CROSS  92–119 720–747 LINKING PROTEIN). PAATM_HUMAN ASPARTATEAMINOTRANSFERASE, 109–136 MITOCHONDRIAL PRECURSOR (EC 2.6.1.1)PABP2_HUMAN ENDOTHELIAL ACTIN-BINDING 61–88 119–147 2604–2633 PROTEIN(ABP-280) (NONMUSCLE FILAMIN) PAC12_HUMAN ACTIVATOR I 37 KD SUBUNIT306–333 (REPLICATION FACTOR C 37 KD SUBUNIT) (A1 PAC15_HUMAN ACTIVATOR I140 KD SUBUNIT (REPLICATION 14–51 182–209 668–700 FACTOR C LARGESUBUNIT) (A1 PACDL_HUMAN ACYL-COA DEHYDROGENASE PRECURSOR,  78–108179–206 313–340 LONG-CHAIN SPECIFIC (EC 1.3.99.13) PACET_HUMANANGIOTENSIN-CONVERTING ENZYME PRECURSOR,  78–115 126–153 676–710TESTIS-SPECIFIC (EC 3.4.15.1) PACE_HUMAN ANGIOTENSIN-CONVERTING ENZYMEPRECURSOR, 652–689 700–727 1250–1284 SOMATIC (EC 3.4.15.1) (ACE)PACHA_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, 48–80 ALPHA CHAIN PRECURSORPACHE_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, 46–98 EPSILON CHAINPRECURSOR PACHO_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, 45–79 304–331GAMMA CHAIN PRECURSOR PACHP_HUMAN NEURONAL ACETYLCHOLINE RECEPTOR 29–5670–97 PROTEIN, BETA-4 CHAW (FRAGMENT) PACRO_HUMAN ACROSIN PRECURSOR (EC3.4.21.10). 122–149 PACYM_HUMA ACYLPHOSPHATASE, MUSCLE TYPE 26–53ISOZYME (EC 3.6.1.7) (ACYLPHOSPHATE PADT2_HUMAN ADP.ATP CARRIER PROTEIN,FIBROBLAST 162–189 ISOFORM (ADP/ATP TRANSLOCASE 2) PADT3_HUMAN ADP.ATPCARRIER PROTEIN, LIVER 163–190 ISOFORM T2 (ADP/ATP TRANSLOCASE 3)PAK79_HUMAN A-KINASE ANCHOR PROTEIN 79 (AKAP 79) 197–238 381–414(CAMP-DEPENDENT PROTEIN KINASE PALFA_HUMAN FRUCTOSE-BISPHOSPHATEALDOLASE 36–63 (EC 4.1.2.13) A (MUSCLE). PALFB_HUMANFRUCTOSE-BISPHOSPHATE ALDOLASE  79–113 (EC 4.1.2.13) B (LIVER).PAMD1_HUMAN AMP DEAMINASE 1 (EC 3.5.4.6) 59–86 (MYOADENYLATE DEAMINASE)(AMP DEAMINASE PAMD3_HUMAN AMP DEAMINASE 3 (EC 3.5.4.6) 49–76 (AMPDEAMINASE ISOFORM E). PAMPN_HUMAN AMINOPEPTIDASE N (EC 3.4.11.2) 492–523604–648 926–964 (MICROSOMAL AMINOPEPTIDASE) (GP150) PAMPR_HUMANAMPHIREGULIN PRECURSOR (AR). 213–247 PAMRP_HUMAN ALPHA-2-MACROGLOBULIN173–236 263–290 RECEPTOR-ASSOCIATED PROTEIN PRECURSOR PANFB_HUMAN BRAINNATRIURETIC PEPTIDE 36–63 PRECURSOR PANK1_HUMAN ANKYRIN R (ANKYRINS 2.1AND 2.2) 812–839 1004–1031 1617–1644 (ERYTHROCYTE ANKYRIN). PANKB_HUMANANKYRIN, BRAIN VARIANT 1 (ANKYRIN B) 1544–1571 (ANKYRIN, NONERYTHROID)PANKC_HUMAN ANKYRIN, BRAIN VARIANT 2 (ANKYRIN B) 1811–1838 (ANKYRIN,NONERYTHROID) PANPA_HUMAN ATRIAL NATRIURETIC PEPTIDE RECEPTOR A 553–580825–852 PRECURSOR (ANP-A) (ANPRA) (GC-A) PANPB_HUMAN ATRIAL NATRIURETICPEPTIDE RECEPTOR B 810–837 PRECURSOR (ANP-B) (ANPRB) (GC-B) PANT3_HUMANANTITHROMBIN-III PRECURSOR (ATIII). 162–196 PANX2_HUMAN ANNEXIN II(LIPOCORTIN II) (CALPACTIN 1 40–67 306–333 HEAVY CHAIN) (CHROMOBINDIN 8)PANX3_HUMAN ANNEXIN III (LIPOCORTIN III) (PLACENTAL 215–242ANTICOAGULANT PROTEIN III) PANX6_HUMAN ANNEXIN VI (LIPOCORTIN VI) (P68)(P70) 60–87 626–653 (PROTEIN III) (CHROMOBINDIN 20) PANXI_HUMAN ANNEXIN,INTESTINE-SPECIFIC (ISA). 37–78 137–164 PAOFA_HUMAN AMINE OXIDASE(FLAVIN-CONTAINING) A 16–43  74–104 (EC 1.4.3.4) (MONOAMINE OXIDASE)PAOFB_HUMAN AMINE OXIDASE (FLAVIN-CONTAINING) B 68–95 (EC 1.4.3.4)(MONOAMINE OXIDASE) PAPA1_HUMAN APOLIPOPROTEIN A-I PRECURSOR (APO-AI).57–84 PAPB_HUMAN APOLIPOPROTEIN B-100 PRECURSOR 585–619 1073–11001353–1380 1524–1584 2074–2113  2132–2159 2181–2215 2240–2271 2360–2389(APO B-100/APO B-48). 2466–2507 2529–2559 2850–3000 3360–3390 3480–3570 3620–3654 4040–4074 4090–4120 4135–4167 4274–4301 4397–4438 4465–44924499–4544 PAPC2_HUMAN APOLIPOPROTEIN C-II PRECURSOR 36–63 (APO-CII)PAPC_HUMAN ADENOMATOUS POLYPOSIS COLI PROTEIN 145–172 617–651 834–8611795–1822 2172–2212  2572–2609 (APC PROTEIN). PAPE_HUMAN APOLIPOPROTEINE PRECURSOR 48–81 247–274 (APO-E) PAPOA_HUMAN APOLIPOPROTEIN(A)PRECURSOR 4448–4475 (EC 3.4.21.-) (APO(A)) (LP(A)). PAQP1_HUMANAQUAPORIN-CHIP (WATER CHANNEL PROTEIN 39–73 FOR RED BLOOD CELLS ANDKIDNEY PARK1_HUMAN BETA-ADRENERGIC RECEPTOR KINASE 1 523–553 (EC2.7.1.126) (BETA-ARK-1). PARLY_HUMAN ARGININOSUCCINATE LYASE (EC4.3.2.1)  69–103 (ARGINOSUCCINASE). PARNT_HUMAN ARYL HYDROCARBONRECEPTOR NUCLEAR 223–250 TRANSLOCATOR (ARNT PROTEIN) (DIO PARRC_HUMANBETA-ARRESTIN 2. 215–242 305–332 PARRS_HUMAN ARRESTIN (RETINALS-ANTIGEN) 299–352 (48 KD PROTEIN) (S-AG). PARY1_HUMAN ARYLAMINEN-ACETYLTRANSFERASE,  7–34 MONOMORPHIC (EC 2.3.1.5) (MNAT) PARY2_HUMANARYLAMINE N-ACETYLTRANSFERASE,  7–34 POLYMORPHIC (EC 2.3.1.5) (PNAT).PASNS_HUMAN ASPARAGINE SYNTHETASE (GLUTAMINE- 311–318 347–374HYDROLYZING) (EC 6.3.5.4) (TS11 CELL PATCD_HUMAN CALCIUM-TRANSPORTINGATPASE 163–190 SARCOPLASMIC RETICULUM TYPE (EC 3.6.1.38). PATCE_HUMANCALCIUM-TRANSPORTING ATPASE 163–190 ENDOPLASMIC RETICULUM TYPE (EC3.6.1.38). PATF1_HUMAN TRANSCRIPTION FACTOR ATF-1 (FRAGMENT). 203–230PATF3_HUMAN TRANSCRIPTION FACTOR ATF-3 (FRAGMENT). 155–183 PATF5_HUMANTRANSCRIPTION FACTOR ATF-5 (FRAGMENT) 30–61 PATF6_HUMAN TRANSCRIPTIONFACTOR ATF-6 (FRAGMENT). 34–68 PATFA_HUMAN TRANSCRIPTION FACTOR ATF-AAND 351–394 ATF-A-DELTA. PATPF_HUMAN ATP SYNTHASE B CHAIN, MITOCHONDRIAL129–163 PRECURSOR (EC 3.6.1.14). PB232_HUMAN NUCLEOLAR PHOSPHOPROTEINB23 114–141 (NUCLEOPHOSMIN) (NUMATRIN). PB2AR_HUMAN BETA-2-ADRENEROICRECEPTOR. 292–319 345–372 PB3A2_HUMAN ANION EXCHANGE PROTEIN 2(NON-ERYTHROID 1081–1111 BAND 3-LIKE PROTEIN) (BND3L). PB94_HUMAN B94PROTEIN. 115–422 525–562 609–636 PBAN7_HUMAN ERYTHROCYTE BAND 7 INTEGRAL106–140 MEMBRANE PROTEIN. PBASO_HUMAN BASONUCLIN. 120–147 310–337773–807 PBC2B_HUMAN TRANSFORMING PROTEIN BCL-2-BETA. 178–205 PBCGF_HUMANB-CELL GROWTH FACTOR PRECURSOR 33–63 (BCGF-12 KD). PBCR_HUMAN BREAKPOINTCLUSTER REGION PROTEIN. 784–125 PBGLR_HUMAN BETA-GLUCURONTDASE PRECURSOR246–280 504–531 (EC 3.2 1.31). PBMP2_HUMAN BONE MORPHOGENETIC PROTEIN 2216–250 PRECURSOR (BMP-2) (BMP-2A) PBMP5_HUMAN BONE MORPHOGENETICPROTEIN 5 202–229 PRECURSOR (BMP-5). PBMP6_HUMAN BONE MORPHOGENETICPROTEIN 6 274–301 PRECURSOR (BMP-6). PBMP7_HUMAN BONE MORPHOGENETICPROTEIN 7 PRECURSOR 192–219 (BMP-7) (OSTEOGENIC PROTEIN 1) PBN51_HUMANBN51 PROTEIN. 284–311 PBP1_HUMAN BACTERICIDAL PERMEABILITY INCREASING168–195 PROTEIN PRECURSOR (BP1) (CAP 57). PBRS3_HUMAN BOMBESIN RECEPTORSUBTYPE-3 (BRS-3). 10–37 PBTF2_HUMAN BASIC TRANSCRIPTION FACTOR 62 KD128–162 353–385 SUBUNIT (P62). PBTG1_HUMAN BTG1 PROTEIN (B-CELLTRANSLOCATION 26–53 GENE 1 PROTEIN). PC1TC_HUMAN C-1-TETRAHYDROFOLATESYNTHASE, 330–363 CYTOPLASMIC (METHYLENETETRAHYDROFO PC2TA_HUMAN MHCCLASS II TRANSACTIVATOR CIITA. 921–948 PCA19_HUMAN COLLAGEN ALPHA I(IX)CHAIN PRECURSOR. 120–150 PCA1B_HUMAN COLLAGEN ALPHA I(XI) CHAINPRECURSOR. 341–368 PCABV_HUMAN CALBINDIN (VITAMIN D-DEPENDENT CALCIUM-27–54 BINDING PROTEIN (CABP). AVIAN- PCAD5_HUMAN CADHERIN 5 PRECURSOR(7B4 ANTIGEN) 723–750 PCADE_HUMAN EPITHELIAL-CADHERIN PRECURSOR 838–865(E-CADHERIN) (UVOMORULIN) (CAM 120/80). PCADN_HUMAN NEURAL-CADHERINPRECURSOR (N-CADHERIN).  95–122 323–350 PCADP_HUMAN PLACENTAL-CADHERINPRECURSOR 384–411 580–607 (P-CADHERIN). PCAGA_HUMAN CALGRANULIN A(MIGRATION INHIBITORY  2–29 FACTOR-RELATED PROTEIN 8) (MRP-8)PCALR_HUMAN CALCITONIN RECEPTOR PRECURSOR 140–167 (CT-R). PCAMA_HUMACARTILAGE MATRIX PROTEIN PRECURSOR. 297–324 467–494 PCAP1_HUMAN CALPAIN1, LARGE (CATALYTIC) SUBUNIT 561–588 (EC 3.4.22.17) (CALCIUM-ACTIVATEDPCAP2_HUMAN CALPAIN 2, LARGE (CATALYTIC) SUBUNIT 257–284 502–529 (EC3.4.22.17) (CALCIUM-ACTIVATED PCAP3_HUMAN CALPAIN P94, LARGE (CATALYTIC)SUBUNIT 674–701 (EC 3.4.22. 17) (CALCIUM- PCAPL_HUMAN PLACENTALCALCIUM-BINDING PROTEIN. 13–40 PCAP_HUMAN ADENYLYL CYCLASE-ASSOCIATED111–138 163–197 321–355 PROTEIN (CAP). PCART_HUMAN CALRETININ (29 KDCALBINDIN). 217–244 PCASB_HUMAN BETA CASEIN PRECURSOR. 14–48 PCATA_HUMANCATALASE (EC 1.11.1.6). 422–456 PCATD_HUMAN CATHEPSIN D PRECURSOR253–282 (EC 3.4.23.5). PCATH_HUMAN CATHEPSIN H PRECURSOR 41–68 (EC3.4.22 16). PCATL_HUMAN CATHEPSIN L PRECURSOR (EC 3.4.22.15) 278–305(MAJOR EXCRETED PROTEIN) (MEP). PCATS_HUMAN CATHEPSIN S PRECURSOR (EC3.4.22.27). 30–57 142–169 PCBFB_HUMAN CCAAT-BINDING (TRANSCRIPTIONFACTOR 24–58 138–165 SUBUNIT B (CBF-B) (NF-Y PROTEIN PCBG_HUMANCORTICOSTEROID-BINDING GLOBULIN  88–122 PRECURSOR (CBG) (TRANSCORTIN).PCBPB_HUMAN CARBOXYPEPTIDASE B PRECURSOR  69–129 278–305 319–346 (EC3.4.17.2) (PANCREAS-SPECIFIC PROTEIN) PCBPH_HUMAN CARBOXYPEPTIDASE HPRECURSOR 355–382 (EC 3.4.17.10) (CARBOXYPEPTIDASE E) (CPE) PCC21_HUMANCDC21 HOMOLOG (P1-CDC21) 35–62 (FRAGMENT). PCC27_HUMAN PROTEIN CDC27HS.209–240 PCCG1_HUMAN TRANSCRIPTION INITIATION FACTOR 1298–1342 TF11D 250KD SUBUNIT (TBP-ASSOCIATED PCD14_HUMAN MONOCYTE DIFFERENTIATION ANTIGENCD14 142–169 PRECURSOR (MYELOID CELL-SPECIF PCD1A_HUMAN T-CELL SURFACEGLYCOPROTEIN CD1A 32–63 281–308 PRECURSOR (CD1A ANTIGEN) (T-CELLPCD1E_HUMAN T-CELL SURFACE GLYCOPROTEIN CD1E  77–104 PRECURSOR (CD1EANTIGEN) (R2G1). PCD20_HUMAN B-LYMPHOCYTE ANTIGEN CD20 (B-LYMPHOCYTE226–255 SURFACE ANTIGEN B1) (LEU-16) PCD2R_HUMAN CD20 RECEPTORPRECURSOR. 226–255 PCD2_HUMAN T-CELL SURFACE ANTIGEN CD2 PRECURSOR 88–119 (T-CELL SURFACE ANTIGEN PCD34_HUMAN HEMOPOIETIC PROGENITOR CELLANTIGEN  74–108 CD34 PRECURSOR. PCD37_HUMAN LEUKOCYTE ANTIGEN CD37.101–128 PCD3G_HUMAN T-CELL SURFACE GLYCOPROTEIN CD3 GAMMA  7–34 CHAINPRECURSOR (T-CELL RECEPT PCD3L_HUMAN CD30 LIGAND (CD30-L)  96–130183–217 PCD4X_HUMAN CD44 ANTIGEN, EPITHELIAL FORM 328–355 PRECURSOR(CD44E) (PHAGOCYTIC PCD4_HUMAN T-CELL SURFACE GLYCOPROTEIN CD4 44–71240–267 PRECURSOR (T-CELL SURFACE ANTIGEN PCD53_HUMAN LEUKOCYTE SURFACEANTIGEN CD53.  87–114 PCD72_HUMAN B-CELL DIFFERENTIATION ANTIGEN 118–177CD72 (LYB-2). PCDK3_HUMAN CELL DIVISION PROTEIN KINASE 3  5–32 (EC2.7.1.-). PCDK5_HUMAN CELL DIVISION PROTEIN KINASE 5  5–32 (EC 2.7.1.-)(KINASE PSSALRE). PCEBB_HUMAN CCAAT/ENHANCER BINDING PROTEIN BETA296–330 (C/EBP BETA) (NUCLEAR FACTOR PCENB_HUMAN MAJOR CENTROMEREAUTOANTIGEN B 568–595 (CENTROMERE PROTEIN B) (CENP-B). PCENC_HUMANCENTROMERE PROTEIN C (CENP-C) 433–460 (CENTROMERE AUTOANTIGEN C).PCENE_HUMAN CENTROMERIC PROTEIN E 372–399 493–520 553–607 715–752767–825  850–884 903–947 963–995 1080–1107 (CENP-E PROTEIN). 1122–11491179–1239 1250–1277 1340–1367 1440–1481  1486–1556 1646–1680 1684–17241808–1846 1852–1883 1890–1917 1940–1988 2021–2048 2288–2318  2440–24782498–2563 PCERU_HUMAN CERULOPLASMIN PRECURSOR (EC 1.16.3.1) 913–940(FERROXIDASE). PCETP_HUMAN CHOLESTERYL ESTER TRANSFER PROTEIN  71–108PRECURSOR. PCFTR_HUMAN CYSTIC FIBROSIS TRANSMEMBRANE 158–189 802–829895–922 1243–1270 CONDUCTANCE REGULATOR (CFTR). PCGCC_HUMAN CGMP-GATEDCATION CHANNEL PROTEIN 216–243 (CYCLIC NUCLEOTIDE PCGL_HUMAN CYSTATHIONINE GAMMA-LYASE 315–349 (EC 4.4.1.1). PCHLR_HUMAN CHLORDECONEREDUCTASE (EC 1.1.1.225) 17–51 (CDR). PCHOL_HUMAN CHOROIDERAEMIA-LIKEPROTEIN. 56–97 230–257 451–478 PCHOR_HUMAN CHOROIDERAEMIA PROTEIN (TCDPROTEIN). 112–139 PCINA_HUMAN SODIUM CHANNEL PROTEIN, CARDIAC AND787–814 943–970 SKELETAL MUSCLE ALPHA-SUB UNIT PCLCA_HUMAN CLATHRINLIGHT CHAIN A (BRAIN AND 121–148 LYMPHOCYTE LCA). PCLCB_HUMAN CLATHRTNLIGHT CHAIN B (BRAIN AND 123–157 LYMPHOCYTE LCB). PCLCY_HUMAN CALCYCLIN(PROLACTIN RECEPTOR  9–50 ASSOCIATED PROTEIN) (PRA) (GROWTH PCLUS_HUMANCLUSTERIN PRECURSOR (COMPLEMENT- 36–98 323–350 367–394 ASSOCIATEDPROTEIN SP-40, 40) PCMGA_HUMA CHROMOGRANIN A PRECURSOR (CGA)  93–120430–457 (CONTAINS: PANCREASTATIN AND WE-14) PCNTF_HUMAN CILIARYNEUROTROPHIC FACTOR (CNTF). 64–93 PCO02_HUMAN TUMOR-ASSOCIATED ANTIGENCO-029. 29–56  95–148 PCO3_HUMAN COMPLEMENT C3 PRECURSOR. 242–276593–620 837–867 PCO4_HUMAN COMPLEMENT C4 PRECURSOR, 1292–1319 PCO5_HUMANCOMPLEMENT C5 PRECURSOR, 298–342 537–564 970–997 1270–1304 PCO6_HUMANCOMPLEMENT C6 PRECURSOR, 367–398 PCO7_HUMAN COMPLEMENT C7 PRECURSOR.225–261 PCOXI_HUMAN CYTOCHROME C OXIDASE POLYPEPTIDE I 353–380 (EC1.9.3.1). PCP70_HUMAN CYTOCHROME P450 VII (CHOLESTEROL 263–290 346–3737-ALPHA-MONOOXYGENASE) PCPCH_HUMAN CYTOCHROME P450 IIC17 (EC 1.14.14.1)109–136 (P450-254C) (FRAGMENT) PCPE1_HUMAN CYTOCHROME P450 IIE1 (EC1.14.14.1) 231–258 (P450-J) (ETHANOL INDUCIBLE) PCPSM_HUMANCARBAMOYL-PHOSPHATE SYNTHASE (AMMONIA) 112–146 420–447 MITOCHONDRIALPRECURSOR PCPT2_HUMAN MITOCHONDRIAL CARNITINE 410–437PALMITOYLTRANSFERASE II PRECURSOR PCPT7_HUMAN CYTOCHROME P450 XVIIA1(P450-C17) 226–257 (EC 1.14.99.9) (STEROID 17-ALPHA- PCPV1_HUMANCYTOCHROME P450 XIXA1 (AROMATASE) 234–271 (EC 1.14.14.1) (ESTROGENPCR2_HUMAN COMPLEMENT RECEPTOR TYPE 2 PRECURSOR  986–1013 (CR2)(COMPLEMENT C3D RECEPTOR) PCRCM_HUMAN COLORECTAL MUTANT CANCER PROTEIN 68–126 379–420 633–678 724–754 763–790  (MCC PROTEIN). PCREB_HUMAN CAMPRESPONSE ELEMENT BINDING PROTEINS  94–125 A AND B (CREB-A AND CREB-B).PCREP_HUMAN CAMP RESPONSE ELEMENT BINDING PROTEIN 380–414 CRE-BP1.PCRP_HUMAN C-REACTIVE PROTEIN PRECURSOR. 60–87 150–177 PCS1_HUMANCLEAVAGE SIGNAL-1 PROTEIN (CS-1). 203–233 PCSF1_HUMAN MACROPHAGE COLONYSTIMULATING FACTOR-1 143–170 PRECURSOR (CSF-1) (MCSF). PCST3_HUMANCLEAVAGE STIMULATION FACTOR, 50 KD  6–33 SUBUNIT (CSTF 50 KD SUB UNIT)(CF-1 PCTNA_HUMAN ALPHA-CATENIN (CADHERIN-ASSOCIATED 651–718 PROTEIN).PCTNR_HUMAN ALPHA-CATENIN RELATED PROTEIN (CATENIN 680–717 ALPHA-2).PCX26_HUMAN GAP JUNCTION BETA-2 PROTEIN (CONNEXIN 108–139 26) (CX26).PCX32_HUMAN GAP JUNCTION BETA-I PROTEIN (CONNEXIN 117–144 32) (CX32)(GAP JUNCTION 28 KD PCX37_HUMAN GAP JUNCTION ALPHA-4 PROTEIN (CONNEXIN 88–115 37) (CX37). PCYB5_HUMAN CYTOCHROME B5.  3–42 PCYG1_HUMANGUANYLATE CYCLASE SOLUBLE, BETA-1 CHAIN  80–107 126–153 352–396 (EC4.6.1.2) (70 KD CHAIN) PCYG4_HUMAN GUANYLATE CYCLASE SOLUBLE, ALPHA-2106–133 CHAIN (EC 4.6.1.2). PCYGR_HUMAN RETINAL GUANYLYL CYCLASEPRECURSOR 824–851 (EC 4.6.1.2). PCYRG_HUMAN CYTOKINE RECEPTOR COMMONGAMMA CHAIN 293–320 PRECURSOR (GAMMA-C) PCYTA_HUMAN CYSTATIN A (STEFINA) 27–58 (CYSTATIN AS). PDBL_HUMAN PROTO-ONCOGENE DBL PRECURSOR 233–283485–524 766–793 801–845 (CONTAINS: MCF2). PDESM_HUMAN DESMIN. 153–180272–312 PDESP_HUMAN DESMOPLAKIN I AND II (DPI AND DPII) 31–79 113–143217–244 269–317 382–434  437–467 528–558 563–598 630–674 (FRAGMENT).697–734 738–789 1456–1493 1508–1535 PDHAP_HUMAN ALDEHYDE DEHYDROGENASE,DIMERIC 31–58 NADP-PREFERRING (EC 1.2.1.5) PDMD_HUMAN DYSTROPHIN. 86–116 338–365 484–511 753–780 976–1003 1012–1039 1201–1228 1364–13941615–1674 1838–1865 2158–2185 2313–2343 2752–2779 2786–2830  2912–29583014–3041 3499–3533 PDNJI_HUMAN DNAJ PROTEIN HOMOLOG 45–76 PDNLI_HUMANDNA LIGASE 1 (EC 6.5.1.1) 130–157 355–392 732–759(POLYDEOXYRIBONUCLEOTIDE SYNTHASE (ATP)) PDPOA_HUMAN DNA POLYMERASEALPHA (EC 2.7.7.7). 25–74 1009–1057 1100–1127 PDPOD_HUMAN DNA POLYMERASEDELTA CATALYTIC CHAIN 729–756 (EC 2.7.7.7). PDPP4_HUMAN DIPEPTIDYLPEPTIDASE IV (EC 3.4.14.5) 29–77 114–148 (DPP IV) (T-CELL ACTIVATIONPDRN1_HUMAN DEOXYRIBONUCLEASE 1 PRECURSOR 44–71 (EC 3.1.21.1) (DNASE I).PDSC2_HUMAN DESMOCOLLIN 3A/3B PRECURSOR  80–107 355–398 (DESMOSOMALGLYCOPROTEIN II AND III). PDSG1_HUMAN DESMOGLEIN 1 PRECURSOR (DESMOSOMAL15–42 271–298 497–531 GLYCOPROTEIN I) (DGI). PDSG3_HUMAN DESMOGLEIN 3PRECURSOR (130 KD 211–248 325–352 PEMPHIGUS VULGARIS ANTIGEN) (PVA)PDUG_HUMAN DIVERGENT UPSTREAM PROTEIN (DUP). 584–618 PEAR1_HUMAN V-ERBARELATED PROTEIN EAR-1. 523–550 PEB12_HUMAN EBV-INDUCED G PROTEIN-COUPLED44–78 RECEPTOR 2 (EB12). PET1B_HUMAN ELONGATION FACTOR I-BETA(EF-1-BETA). 105–132 PEF1D_HUMAN ELONGATION FACTOR I-DELTA (EF-1-DELTA). 84–118 PEGFR_HUMAN EPIDERMAL GROWTH FACTOR RECEPTOR 64–91 440–467PRECURSOR (EC 2.7.1.112). PEGF_HUMAN EPIDERMAL GROWTH FACTOR PRECURSOR,47–74 KIDNEY (EGF) (UROGASTRONE). PELF1_HUMAN ETS-RELATED TRANSCRIPTIONFACTOR ELF-1. 551–588 PENPL_HUMAN ENDOPLASMIN PRECURSOR (94 KD GLUCOSE-47–74 246–273 REGULATED PROTEIN) (GRP94) (GP96 PENV1_HUMANRETROVIRUS-RELATED ENV POLYPROTEIN. 382–420 PEPC_HUMAN IG EPSILON CHAINC REGION. 161–188 PEPMO_HUMAN EPIMORPHIN. 35–62 67–94 249–283PER72_HUMAN PROTEIN DISULFIDE ISOMERASE-RELATED 58–85 142–169 458–485PROTEIN PRECURSOR (ERP72). PERC1_HUMAN DNA EXCISION REPAIR PROTEINERCC-1. 240–270 PERC6_HUMAN EXCISION REPAIR PROTEIN ERCC-6. 160–209939–973 PESTR_HUMAN ESTROGEN RECEPTOR (ER). 451–488 PET2_HUMANENDOTHELIN-2 PRECURSOR (ET-2). 133–160 PET3_HUMAN ENDOTHELIN-3 PRECURSOR(ET-3). 182–209 PEV2A_HUMAN EV12A PROTEIN PRECURSOR. 29–56 PEZR1_HUMANEZRIN (P18) (CYTOVILLIN) (VILLIN-2). 119–146 351–395 402–429 512–539PFA5_HUMAN COAGULATION FACTOR V PRECURSOR. 2103–2137 PFA8_HUMANCOAGULATION FACTOR VIII PRECURSOR 871–905 1007–1034 1194–1230(PROCOAGULANT COMPONENT). PFA9_HUMAN COAGULATION FACTOR IX PRECURSOR271–298 (EC 3.4.21.22) (CHRISTMAS FACTOR). PFAB1_HUMAN FATTYACID-BINDING PROTEIN, INTESTINAL.  98–125 PFASA_HUMANAPOPTOSIS-MEDIATING SURFACE ANTIGEN 23–50 249–301 306–333 FA5 PRECURSOR(APO-1 ANTIGEN). PFCE2_HUMAN LOW AFFINITY IMMUNOGLOBULIN EPSILON  81–115FC RECEPTOR (LYMPHOCYTE IGE PFCEA_HUMAN HIGH AFFINITY IMMUNOGLOBULINEPSILON 140–174 RECEPTOR ALPHA-SUBUNIT (FCER1) PFGR2_HUMAN FIBROBLASTGROWTH FACTOR RECEPTOR 2 310–337 PRECURSOR (EC 2.7.1.112). PFIBA_HUMANFIBRINOGEN ALPHA CHAIN PRECURSOR. 131–165 427–457 PFIBB_HUMAN FIBRINOGENBETA CHAIN PRECURSOR. 149–186 PFIBG_HUMAN FIBRINOGEN GAMMA-A CHAINPRECURSOR. 59–93 125–160 PFIBH_HUMAN FIBRINOGEN GAMMA-B CHAIN(FIBRINOGEN 59–93 125–160 GAMMA′). PFINC_HUMAN FIBRONECTIN PRECURSOR.2168–2199 PFLI1_HUMAN FLI-1 ONCOGENE (ERGB TRANSCRIPTION 172–209 FACTOR)PFMO3_HUMAN DIMETHYLANILINE MONOOXYGENASE (N-OXIDE 184–218 256–283301–328 FORMING) 3 (EC 1.14.13.1) PFO5_HUMAN P55-C-FOS PROTO-ONCOGENEPROTEIN. 162–193 PFRA1_HUMAN FOS-RELATED ANTIGEN 1. 133–168 PFRA2_HUMANFOS-RELATED ANTIGEN 2. 149–180 PFRIH_HUMAN FERRITIN HEAVY CHAIN.  7–34PFRIL_HUMAN FERRITIN LIGHT CHAIN.  3–33 PFSHR_HUMAN FOLLICLE STIMULATINGHORMONE RECEPTOR 364–395 PRECURSOR (FSH-R) PFUCO_HUMAN TISSUEALPHA-L-FUCOSIDASE PRECURSOR 308–335 (EC 3.2.1.51) (ALPHA-L-FUCOSIDASEPFUMH_HUMAN FUMARATE HYDRATASE, MITOCHONDRIAL 424–451 (EC 4.2.1.2)(FUMARASE). PG052_HUMAN PUTATIVE LYMPHOCYTE G0/G1 SWITCH 56–83 PROTEIN.PG19P_HUMAN PROTEIN KINASE C SUBSTRATE. 80 KD 146–173 PROTEIN, HEAVYCHAIN (PKCSH) PG6P1_HUMAN GLUCOSE6-PHOSPHATE ISOMERASE (GPI) 16–50 (EC5.3.1.9) (PHOSPHOGLUCOSE PG732_HUMAN MAJOR GASTROINTESTINAL TUMOR-181–215 ASSOCIATED PROTEIN GA733-2 PRECURSOR PGA12_HUMAN GALACTOKINASE 2(EC 2.7.1.6). 254–281 PGAA1_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR210–237 ALPHA-1 SUB UNIT PRECURSOR (GABA(A) PGAA3_HUMANGAMMA-AMINOBUTYRIC-ACID RECEPTOR 211–255 ALPHA-3 SUB UNIT PRECURSOR(GABA(A) PGASR_HUMAN GASTRIN/CHOLECYSTOKININ TYPE B  75–105 RECEPTOR(CCK-B RECEPTOR). PGB01_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN 22–49G(O). ALPHA SUBUNIT 1. PGB02_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN22–49 G(O), ALPHA SUBUNIT 2. PGBAK_HUMAN GUANINE NUCLEOTIDE-BINDINGPROTEIN 22–49 G(K). ALPHA SUBUNIT (G(1) ALPHA-3). PGBAS_HUMAN GUANINENUCLEOTIDE-BINDING PROTEIN  7–34 G(S), ALPHA SUBUNIT (ADENYLATEPGBAY_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN  95–122 G(Y). ALPHASUBUNIT (ALPHA-II). PGBB3_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN 65–92G(I)/G(S)/G(T) BETA SUBUNIT 3 PGBLP_HUMAN GUANINE NUCLEOTIDE-BINDINGPROTEIN 110–137 255–282 289–316 BETA SUBUNIT-LIKE PROTEIN 12.3.PGBP2_HUMAN INTERFERON-INDUCED GUANYLATE-BINDING 454–488 PROTEIN 2(GUANINE NUCLEOTIDE- PGBT2_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEING(T). 22–49 ALPHA-2 SUBUNIT (TRANSDUCIN PGCF_HUMAN GC-RICH SEQUENCEDNA-BINDING FACTOR 200–227 293–320 367–394 396–423 647–674  (GCF)(TRANSCRIPTION FACTOR 9) PGCHI_HUMAN GTP CYCLOHYDROLASE I (EC 3.5.4.16).165–192 PGCRA_HUMAN GLUCOCORTICOID RECEPTOR, ALPHA (GR). 167–194PGCRB_HUMAN GLUCOCORTICOID RECEPTOR, BETA (GR). 167–194 PGCSP_HUMANGLYCINE DEHYDROGENASE (DECARBOXYLATING) 460–487 PRECURSOR (EC 1.4 4.2)PGDN_HUMAN GLIA DERIVED NEXIN (GDN) (PROTEASE  83–110 NEXIN I).PGELS_HUMAN GELSOLIN PRECURSOR, PLASMA 701–728 (ACTIN-DEPOLYMERIZINGFACTOR) (AUF) PGFAP_HUMAN GLIAL FIBRILLARY ACIDIC PROTEIN, 189–216349–376 384–411 ASTROCYTE. PGL65_HUMAN N-ACETYLGLUCOSAMINE-6-SULFATASE170–221 PRECURSOR (EC 3.1.6.14) (G65) PGLPK_HUMAN GLYCEROL KINASE (EC2.7.1.30)  78–112 251–278 (ATP: GLYCEROL 3-PHOSPHOTRANSFERASE)PGLY1_HUMAN SERINE HYDROXYMETHYLTRANSFERASE, 32–59 344–371 CYTOSOLIC (EC2.1.2.1) (SERINE PGLY2_HUMAN SERINE HYDROXYMETHYLTRANSFERASE, 417–444MITOCHONDRIAL (EC 2.1.2.1) (SERINE PGR78_HUMAN 78 KD GLUCOSE REGULATEDPROTEIN 564–591 598–625 PRECURSOR (GRP 78) (IMMUNOGLODULIN PGRA2_HUMANGLYCINE RECEPTOR ALPHA-2 CHAIN 142–169 341–368 PRECURSOR. PGRAV_HUMANGRAVIN (FRAGMENT).  9–43 61–88 PGRFR_HUMAN GROWTH HORMONE-RELEASINGHORMONE 128–155 RECEPTOR PRECURSOR (GHRH RECEPT PGTH2_HUMAN GLUTATHIONES-TRANSFERASE HA 64–91 SUBUNIT 2 (EC 2.5.1.18) (GTH2) (CLASS-PGTPA_HUMAN GTPASE-ACTIVATING PROTEIN (GAP) 474–501 1012–1047 (RAS P21PROTEIN ACTIVATOR). PGTR1_HUMAN GLUCOSE TRANSPORTER TYPE 1, 274–301ERYTHROCYTE/BRAIN. PGTR3_HUMAN GLUCOSE TRANSPORTER TYPE 3, 272–299BRAIN. PGTR4_HUMAN GLUCOSE TRANSPORTER TYPE 4, 290–317INSULIN-RESPONSIVE. PH10_HUMAN HISTONE H1′. 44–89 PH1A_HUMAN HISTONE H1A(H1.1).  73–104 PH1B_HUMAN HISTONE H1B (H1.4).  70–101 PH1C_HUMANHISTONE H1C (H1.3).  71–102 PH1D_HUMAN HISTONE H1D (H1.2).  70–101PH1T_HUMAN HISTONE H1T.  74–105 PH2B0_HUMAN HISTONE H2B.1. 20–47PK2B2_HUMAN HISTONE H2B.2. 20–47 PH2B_HUMAN HISTONE H2B (H2B.1 A). 20–47PHA25_HUMAN HLA CLASS II HISTOCOMPATIBILITY 142–169 ANTIGEN, DQ(5) ALPHACHAIN PRECURSOR. PHB2K_HUMAN HLA CLASS II HISTOCOMPATIBILITY 56–83ANTIGEN, DR-W53 BETA CHAIN PRECURSOR. PHB2P_HUMAN HLA CLASS IIHISTOCOMPATIBILITY 50–77 ANTIGEN, DP(W4) BETA CHAIN PRECURSOR.PKB2Q_HUMAN HLA CLASS II HISTOCOMPATIBILITY 50–77 ANTIGEN, DP(W2) BETACHAIN PRECURSOR. PHB2S_HUMAN HLA CLASS II HISTOCOMPATIBILITY 16–43ANTIGEN, SB BETA CHAIN (FRAGMENT) PHBG1_HUMAN HEPARIN-BINDING GROWTHFACTOR PRECURSOR 102–129 1 (HBGF-1) (ACIDIC FIBROBLAST PHBG3_HUMAN INT-2PROTO-ONCOGENE PROTEIN 61–91 PRECURSOR (HBGF-3). PHBG6_HUMAN FIBROBLASTGROWTH FACTOR-6 41–75 159–186 PRECURSOR (FGF-4) (HBGF-6) (HST-2).PHBI_HUMAN P59 PROTEIN (HSP BINDING IMMUNOPHILIN) 264–312 (HBI)(POSSIBLE PEPTIDYL-PROLYL PHEM4_HUMAN UROPORPHYRINOGEN-III SYNTHASE 74–118 (EC 4.2.1.75) (UROPORPHYRINOGEN-III PHEP2_HUMAN HEPARIN COFACTORII PRECURSOR (HC-II) 169–196 (PROTEASE INHIBITOR LEUSERPIN 2)PHEPS_HUMAN SERINE PROTEASE HEPSIN 22–49 (EC 3.4.21.-). PHEXA_HUMANBETA-HEXOSAMINIDASE ALPHA CHAIN 356–383 PRECURSOR (EC 3.2.1.52)(N-ACETYL- PHEXB_HUMAN BETA-HEXOSAMINIDASE BETA CHAIN 388–415 PRECURSOR(EC 3.2.1.52) (N-ACETYL-BETA- PHMX1_HUMAN HOMEOBOX PROTEIN MSX-1(HOX-7). 178–212 PHNFA_HUMAN HEPATOCYTE NUCLEAR FACTOR  2–29 1-ALPHA(HNF-1 A) (LIVER SPECIFIC PHO1_HUMAN HEME OXYGENASE 1 (EC 1.14.99.3)197–224 (HO-1). PHPPD_HUMAN 4-HYDROXYPHENYLPYRUVATE 306–333 DIOXYGENASE(EC 1.13.11.27) (4HPPD). PHRX_HUMAN ZINC FINGER PROTEIN HRX. 521–548914–974 1637–1666 2215–2286 2289–2316  3317–3344 3448–3475 PHS1_HUMANHEMATOPOIETIC LINEAGE CELL 43–70 SPECIFIC PROTEIN. PHS9A_HUMAN HEATSHOCK PROTEIN HSP 443–470 640–674 90-ALPHA (HSP 86). PHSER_HUMANHEAT-STABLE ENTEROTOXIN RECEPTOR 511–545 PRECURSOR (GC-C) (INTESTINALPHSF1_HUMAN HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) 113–140 168–209 (HEATSHOCK TRANSCRIPTION FACTOR PHSF2_HUMAN HEAT SHOCK FACTOR PROTEIN 2 (HSF2) 117–198 (HEAT SHOCK TRANSCRIPTION FACTOR PHV2I_HUMAN IG HEAVY CHAINPRECURSOR V-II  67–108 REGION (ARH-77). PHV3T_HUMAN IG HEAVY CHAIN VIIIREGION 47–74 (GAL). PHX11_HUMAN HOMEOBOX PROTEIN HOX-11 (TCL-3 262–289PROTO-ONCOGENE). PHXB7_HUMAN HOMEOBOX PROTEIN HOX-B7 (HOX-2C) 135–162(HHO.C1). PIAPP_HUMAN ISLET AMYLOID POLYPEPTIDE 53–80 PIBP3_HUMANINSULIN-LIKE GROWTH FACTOR BINDING 183–210 PROTEIN 3 PRECURSOR (IGFBP-3)PIC1_HUMAN PLASMA PROTEASE C1 INHIBITOR 251–278 PRECURSOR (C1 INH).PICA2_HUMAN INTRACELLULAR ADHESION MOLECULE-2 57–84 PRECURSOR (ICAM-2).PIDE_HUMAN INSULIN-DEGRADING ENZYME 474–504 907–941 (EC 3.4.99.45)(INSULINASE) (INSULIN PIF41_HUMAN EUKARYOTIC INITIATION FACTOR 4A-1232–259 322–349 (EIF-4A-1). PIF4B_HUMAN INTRINSIC FACTOR PRECURSOR (IF)149–176 406–433 (GASTRIC INTRINSIC FACTOR). PIF_HUMAN INHIBIN BETA ACHAIN PRECURSOR 308–349 (ACTIVIN BETA-A CHAIN) (ERYTHROID PIHBA_HUMANINTERLEUKIN-1 ALPHA PRECURSOR  80–107 183–210 (IL-1 ALPHA)(HEMATOPOETIN-1). PIL1A_HUMAN INTERLEUKIN-1 RECEPTOR, TYPE I  76–110172–199 PRECURSOR (IL-1R1) (P80). PIL1R_HUMAN INTERLEUKIN-1 RECEPTOR,TYPE I 437–467 PRECURSOR (IL-1R1)(P80). PIL1S_HUMAN INTERLEUKIN-1RECEPTOR, TYPE II 159–186 PRECURSOR (IL-1R2). PIL5R_HUMAN INTERLEUKIN-5RECEPTOR ALPHA CHAIN  87–114 PRECURSOR (IL-5R-ALPHA). PIL6_HUMANINTERLEUKIN-6 PRECURSOR (IL-6) (B-CELL 112–139 STIMULATORY FACTOR 2)(BSF-2) PINAI_HUMAN INTERFERON ALPHA I PRECURSOR.  94–121 PINAR_HUMANINTERFERON ALPHA RECEPTOR PRECURSOR  90–117 164–191 300–327 508–535(IFN-ALPHA-REC). PINB_HUMAN INTERFERON BETA PRECURSOR (FIBROBLAST). 88–129 PIN11_HUMAN INTERFERON-INDUCED 17 KD PROTEIN  83–121 (CONTAINS:INTERFERON-INDUCED 15 KD PIN16_HUMAN INTERFERON-INDUCED 56 KD PROTEIN51–78 216–245 393–430 (IFI-56K). PINSR_HUMAN INSULIN RECEPTOR PRECURSOR592–619 (EC 2 7.1.1 12) (IR). PINVO_HUMAN INVOLUCRIN. 119–146 229–273326–363 386–450 PIP3K_HUMAN ID-MYO-INOSITOL-TRISPHOSPHATE 121–1623-KINASE A (EC 2.7.1.127) (INOSITOL PIPSP_HUMAN PLASMA SERINE PROTEASE(PROTEIN C)  90–117 206–233 INHIBITOR PRECURSOR (PCI) PIRBP_HUMANINTERPHOTORECEPTOR RETINOID-BINDING 670–697 PROTEIN PRECURSOR (IRBP)PIRF2_HUMAN INTERFERON REGULATORY FACTOR 2 (IFK-2). 157–193 PIT5P_HUMAN75 KD INOSITOL-1,4,5-TRISPHOSPHATE 235–262 5-PHOSPHATASE PRECURSORPITA2_HUMAN PLATELET MEMBRANE GLYCOPROTEIN IA 579–606 900–927 PRECURSOR(GPIA) (COLLAGEN RECEPTO PITA5_HUMAN FIBRONECTIN RECEPTOR ALPHA SUBUNIT250–284 657–695 765–792 PRECURSOR (INTEGRIN ALPHA-F) PITA6_HUMANINTEGRIN ALPHA-6 PRECURSOR (VLA-6) 884–911 944–974 (INTEGRIN ALPHA-E)(CD49F) PITAL_HUMAN LEUKOCYTE ADHESION GLYCOPROTEIN LFA-1 256–283310–341 795–822 ALPHA CHAIN PRECURSOR (LEUKOC PITAM_HUMAN CELL SURFACEGLYCOPROTEIN MAC-1 ALPHA 1044–1078 SUBUNIT PRECURSOR (CR-3 ALPHAPITAV_HUMAN VITRONECTIN RECEPTOR ALPHA SUBUNIT 230–264 PRECURSOR(INTEGRIN ALPHA-V) PITB1_HUMAN FIBRONECTIN RECEPTOR BETA SUBUNIT 218–245354–399 PRECURSOR (INTEGRIN BETA-1) (CD29) PITB2_HUMAN CELL SURFACEADHESION GLYCOPROTEINS 339–366 705–732 LFA-1, CR3 AND P150, 95, BETA-PITB3_HUMAN PLATELET MEMBRANE GLYCOPROTEIN IIIA 324–351 PRECURSOR(GPIIIA) (INTEGRIN BETA- PITB4_HUMAN INTEGRIN BETA-4 SUBUNIT PRECURSOR342–369 (GP150). PITB5_HUMAN INTEGRIN BETA-5 SUBUNIT PRECURSOR. 724–751PITB6_HUMAN INTEGRIN BETA-6 SUBUNIT PRECURSOR. 311–338 352–393PITB8_HUMAN INTEGRIN BETA-8 SUBUNIT PRECURSOR. 362–399 696–737PIT12_HUMAN INTER-ALPHA-TRYPSIN INHIBITOR COMPLEX 134–161 425–452772–818 COMPONENT 11 PRECURSOR. PK1C1_HUMAN KERATIN, TYPE I CYTOSKELETAL10 154–187 196–227 317–399 428–462 (CYTOKERATIN 10) (K10). PK1CM_HUMANKERATIN, TYPE I CYTOSKELETAL 13 112–142 (CYTOKERATIN 13) (K13).PK1CN_HUMAN KERATIN, TYPE I CYTOSKELETAL 14 122–152 306–335 393–424(CYTOKERATIN 14) (K14). PK1CO_HUMAN KERATIN, TYPE I CYTOSKELETAL 15113–143 (CYTOKERATIN 15) (K15). PK1CP_HUMAN KERATIN. TYPE I CYTOSKELETAL16 308–339 (CYTOKERATIN 16) (K16). PK1CQ_HUMAN KERATIN. TYPE ICYTOSKELETAL 17 122–152 302–346 393–431 (CYTOKERATIN 17) (K17).PK1CR_HUMAN KERATIN. TYPE I CYTOSKELETAL 18  87–114 251–298 337–385(CYTOKERATIN 18) (K18). PK1CS_HUMAN KERATIN, TYPE 1 CYTOSKELETAL 19 88–118 317–362 370–397 (CYTOKERATIN 19) (K19). PK2C1_HUMAN KERATIN,TYPE 1 CYTOSKELETAL 1 196–226 346–384 390–467 (CYTOKERATIN 1) (K1)(CYTOSKELETAL 67 PK2C2_HUMAN KERATIN, TYPE II CYTOSKELETAL 215–248364–405 461–488 65 KD. PK2C4_HUMAN KERATIN, TYPE II CYTOSKELETAL 4 42–73126–151 189–248 (CYTOKERATIN 4) (K4) (FRAGMENT). P1GC5_HUMAN KERATIN,TYPE II CYTOSKELETAL 5 185–246 332–373 (CYTOKERATIN 5) (K5) (58 KDPK2C6_HUMAN KERATIN. TYPE II CYTOSKELETAL 6 178–239 325–366 422–449(CYTOKERATIN 6) (K6B KERATIN). PK2C8_HUMAN KERATIN, TYPE II CYTOSKELETAL8 140–167 (CYTOKERATIN 8) (K8). PK2CA_HUMAN KERATIN, TYPE IICYTOSKELETAL 56 KD  7–34 120–161 217–244 (K6A KERATIN) (FRAGMENT).PK6PF_HUMAN 6-PHOSPHOFRUCTOKINASE, MUSCLE TYPE 140–167 (EC 2.7.1.11)(PHOSPHOFRUCTOKINASE PK6PL_HUMAN 6-PHOSPHOFRUCTOKINASE, LIVER TYPE 49–80128–159 (EC 2.7.1.11) (PHOSPHOFRUCTOKINASE PKABL_HUMAN PROTO-ONCOGENETYROSINE-PROTEIN 498–525 KINASE ABL (EC 2.7.1.112) (P150) PKAC_HUMAN IGKAPPA CHAIN C REGION. 37–85 PKALM_HUMAN KALLMANN SYNDROME PROTEINPRECURSOR 380–414 (ADHESION MOLECULE-LIKE X-LINK PKAP0_HUMANCAMP-DEPENDENT PROTEIN KINASE TYPE 179–206 I-ALPHA REGULATORY CHAINPKAP1_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE 177–204 I-BETA REGULATORYCHAIN PKAP2_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE 175–202 290–317II-ALPHA REGULATORY CHAIN PKBF1_HUMAN NUCLEAR FACTOR KAPPA-B SUBUNIT-1529–570 (NF-KAPPA-B P105 SUBUNIT) PKCRB_HUMAN CREATINE KINASE, B CHAIN301–328 (EC 2.7.3.2). PKECK_HUMAN TYROSINE PROTEIN-KINASE ECK PRECURSOR466–493 (EC 2.7.1.112) (EPITHELIAL CELL PKFER_HUMAN PROTO-ONCOGENETYROSINE-PROTEIN 219–246 564–591 KINASE FER (EC 2.7.1.112) (P94-FER)PKFES_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN 101–145 295–322 KINASEFES/FPS (EC 2.7.1.112) (C-FES) PKFLT_HUMAN RECEPTOR-RELATED TYROSINEKINASE 208–235 319–353 FLT PRECURSOR (EC 2.7.1.112) PKFMS_HUMANMACROPHAGE COLONY STIMULATING FACTOR 1 293–320 RECEPTOR PRECURSOR(CSF-1-R) PKFYN_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE 199–233 FYN(EC 2.7.1.112) (P59-FYN) PKGPB_HUMAN CGMP-DEPENDENT PROTEIN KINASE, BETA17–54 ISOZYME (CGK) (EC 2.7.1.37). PKHEK_HUMAN TYROSINE KINASE HEKRECEPTOR PRECURSOR 646–673 (EC 2.7.1.112). PKINH_HUMAN KINESIN HEAVYCHAIN. 125–155 425–452 471–542 633–680 689–716  872–899 PKKIT_HUMAN KITPROTO-ONCOGENE TYROSINE 235–263 KINASE PRECURSOR (EC 2.7.1.112).PKMET_HUMAN HEPATOCYTE GROWTH FACTOR RECEPTOR 898–925 PRECURSOR (METPROTO-ONCOGENE PKNH_HUMAN KININOGEN, HMW PRECURSOR (ALPHA-2- 505–532THIOL PROTEINASE INHIBITOR) PKP58_HUMAN GALACTOSYLTRANSFERASE ASSOCIATED 81–108 PROTEIN KINASE P58/GTA (EC 2.7.1.-) PKP68_HUMANINTERFERON-INDUCED, DOUBLE-STRANDED 149–179 191–225 285–312RNA-ACTIVATED PROTEIN KINASE PKP78_HUMAN PUTATIVESERINE/THREONINE-PROTEIN 582–609 KINASE P78 (EC 2.7.1.-). PKPCL_HUMANPROTEIN KINASE C, ETA TYPE 318–345 (EC 2.7.1.-) (NPKC-ETA) (PKC-L).PKPT1_HUMAN SERINE/THREONINE-PROTEIN KINASE 149–176 209–253 PCTAIRE-1(EC 2.7.1.-). PKPY1_HUMAN PYRUVATE KINASE, M1 (MUSCLE) ISOZYME 243–289(EC 2.7.1.40) (CYTOSOLIC THYROID PKPY2_HUMAN PYRUVATE KINASE, M2 ISOZYME243–289 (EC 2.7.1.40). PKPYR_HUMAN PYRUVATE KINASE, ISOZYME R  2–29 (EC2.7.1.40). PKRET_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN 183–217 KINASERET (EC 2.7.1.112). PKROS_HUMAN ROS PROTO-ONCOGENE TYROSINE 157–203KINASE (EC 2.7.1.112) (FRAGMENT) PKSRC_HUMAN PROTO-ONCOGENETYROSINE-PROTEIN 143–170 KINASE SRC (EC 2.7.1.112) (P60-SRC) PKU7_HUMANLUPUS KU AUTOANTIGEN PROTEIN P70 235–279 (70 KD SUB UNIT OF KU ANTIGEN).PKU86_HUMAN LUPUS KU AUTOANTIGEN PROTEIN P86 258–292 (86 KD SUB UNIT OFKU ANTIGEN). PKYES_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN 209–243 KINASEYES (EC 2.7.1.112) (P61-YES) PLAM1_HUMAN LAMIN B1. 32–66 117–144 152–193214–241 397–424  480–507 510–539 PLAMA_HUMAN LAMIN A (70 KD LAMIN).32–88 114–165 292–343 PLAMC_HUMAN LAMIN C. 32–88 114–165 292–343PLAR_HUMAN LAR PROTEIN PRECURSOR (LEUKOCYTE 935–969 ANTIGEN RELATED) (EC3.1.3.48). PLA_HUMAN LUPUS LA PROTEIN (SJOGREN SYNDROME 191–222 295–342TYPE B ANTIGEN (SS-B)). PLCAT_HUMAN PHOSPHATIDYLCHOLINE-STEROL 131–158ACYLTRANSFERASE PRECURSOR (EC 2.3 1.43) PLDHH_HUMAN L-LACTATEDEHYDROGENASE H CHAIN  81–108 302–329 (EC 1.1.1.27) (LDH-B). PLDHM_HUMANL-LACTATE DEHYDROGENASE M CHAIN 225–252 (EC 1.1.1.27) (LDH-A).PLDLR_HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR 483–510 PRECURSOR.PLECH_HUMAN ASIALOGLYCOPROTEIN RECEPTOR 1 62–96 (HEPATIC LECTIN H1)(ASGPR). PLEM3_HUMAN P-SELECTIN PRECURSOR (GRANULE MEMBRANE 32–59 87–116 PROTEIN 140) (GMP-140) (PADGEM) PLGUL_HUMAN LACTOYLGLUTATHIONELYASE  83–117 (EC 4.4.1.5) (METHYLGLYOXALASE) PLIF_HUMAN LEUKAEMIAINHIBITORY FACTOR  95–122 PRECURSOR (LIF) (DIFFERENTIATION- PLIN1_HUMANLINE-1 REVERSE TRANSCRIPTASE 152–179 232–263 298–358 671–698 874–901 1036–1066 HOMOLOG. PLIPG_HUMAN TRIACYLGLYCEROL LIPASE PRECURSOR 158–185(EC 3.1.1.3) (LIPASE, GASTRIC). PLIPS_HUMAN HORMONE SENSITIVE LIPASE305–332 (EC 3.1.1.-) (HSL). PLKHA_HUMAN LEUKOTRIENE A-4 HYDROLASE (EC3.3.2.6) 42–83 290–324 (LTA-4 HYDROLASE) (LEUKOTRIENE PLMA_HUMAN LAMININA CHAIN PRECURSOR. 1318–1345 1741–1771 1785–1812 1824–1851 1884–1921 1965–1999 2026–2059 2091–2118 PLMB1_HUMAN LAMTNIN B1 CHAIN PRECURSOR.1267–1314 1364–1394 1597–1631 1651–1714 1722–1781  PLMB2_HUMAN LAMININB2 CHAIN PRECURSOR. 1103–1135 1513–1547 PLMP2_HUMAN LYSOSOME-ASSOCIATEDMEMBRANE 155–182 GLYCOPROTEIN 2 PRECURSOR (LAMP-2). PLOX2_HUMANARACHIDONATE 12-LIPOXYGENASE 341–368 (EC 1.13.11.11) (12-LOX).PLOX5_HUMAN ARACHIDONATE 5-LIPOXYGENASE 50–87 (EC 1.13.11.34)(5-LIPOXYGENASE) (5-LO). PLPH_HUMAN LACTASE-PHLORIZIN HYDROLASE 776–803PRECURSOR (EC 3.2.1.108) (EC 3 2.1.62) PLRPB_HUMAN PROTEIN-TYROSINEPHOSPHATASE BETA 140–167 589–637 PRECURSOR (EC 3.1.3.48) (PTP-BETA).PLRPG_HUMAN PROTEIN-TYROSINE PHOSPHATASE 1081–1108 GAMMA PRECURSOR (EC3.1.3.48) PLRPZ_HUMAN PROTEIN-TYROSINE PHOSPHATASE ZETA 553–5871024–1051 1973–2000 PRECURSOR (EC 3.1.3.48) (PTP-ZETA). PLSHR_HUMANLUTROPIN-CHORIOGONADOTROPIC  66–114 448–480 HORMONE RECEPTOR PRECURSOR(LH/CG-R) PLV2B_HUMAN IG LAMBDA CHAIN V-II REGION (NEI). 61–88PLYAG_HUMAN LYSOSOMAL ALPHA-GLUCOSIDASE PRECURSOR 885–912 (EC 3.2.1.20)(ACID MALTASE). PM2OM_HUMA MITOCHONDRIAL 2-OXOGLUTARATE/MALATE 50–77CARRIER PROTEIN (OGCP). PMAC2_HUMAN GALACTOSE-SPECIFIC LECTIN (MAC-2219–246 ANTIGEN) (IGE-BINDING PROTEIN) (35 KD PMAN9_HUMANMAN(9)-ALPHA-MANNOSIDASE 414–441 (EC 3.2.1.-). PMANA_HUMAMANNOSE-6-PHOSPHATE ISOMERASE 60–87 (EC 5.3.1.8) (PHOSPHOMANNOSEISOMERASE) PMANR_HUMA MACROPHAGE MANNOSE RECEPTOR 248–284 1147–1182PRECURSOR. PMAP2_HUMAN MICROTUBULE-ASSOCIATED PROTEIN 2 434–478(FRAGMENT). PMAP4_HUMAN MICROTUBULE-ASSOCIATED PROTEIN 4. 408–449PMAX_HUMAN MAX PROTEIN. 117–144 PMDM2_HUMA MDM2 PROTEIN (P53-ASSOCIATEDPROTEIN). 235–288 PMDR1_HUMAN MULTIDRUG RESISTANCE PROTEIN 1 561–595(P-GLYCOPROTEIN 1). PMERL_HUMAN MERLIN (SCHWANNOMIN). 377–407 532–566PMERO_HUMAN MEROSIN HEAVY CHAIN (LAMININ CHAIN A2)  71–105 139–173431–458 791–818 (FRAGMENT). PMGMT_HUMA METHYLATED-DNA-PROTEIN-CYSTEINE 91–118 METHYLTRANSFERASE (EC 2.1.1.63) (6-O- PMKLP_HUMAN MITOTICKINESIN-LIKE PROTEIN-1. 207–234 319–346 510–537 549–608 PMLCH_HUMANMELANIN-CONCENTRATING HORMONE  8–35 PRECURSOR. PMLK1_HUMAN MIXED LINEAGEKINASE 1 (EC 2.7.1.-) 130–157 321–348 (FRAGMENT). PMMSA_HUMAMETHYLMALONATE-SEMIALDEHYDE 393–420 DEHYDROGENASE PMOES_HUMAN MOESIN(MEMBRANE-ORGANIZING EXTENSION 119–145 351–403 SPIKE PROTEIN).PMPCP_HUMAN MITOCHONDRIAL PHOSPHATE CARRIER 286–313 PROTEIN PRECURSOR.PMP13_HUMAN M-PHASE INDUCER PHOSPHATASE 3 72–99 (EC 3.1.3.48).PMPKK_HUMAN DUAL SPECIFICITY MITOGEN-ACTIVATED 19–50 PROTEIN KINASEKINASE (EC 2.7.1-) PMPR1_HUMAN CATION-INDEPENDENT MANNOSE-6-PHOSPHATE1569–1596 2437–2478 RECEPTOR PRECURSOR (C1 MAN-6- PMRP_HUMAN MULTIDRUGRESISTANCE-ASSOCIATED 396–423 507–548 PROTEIN. PMSHR_HUMAN MELANOCYTESTIMULATING HORMONE 38–65 RECEPTOR (MSH-R) (MELANOTROPIN PMSRE_HUMANMACROPHAGE SCAVENGER RECEPTOR TYPES I 173–204 230–260 AND II (MACROPHAGEACETYLATED PMTDM_HUMA DNA (CYTOSINE-5)-METHYLTRANSFERASE 387–414 601–628(EC 2.1.1.37) (DNA PMTF1_HUMAN MITOCHONDRIAL TRANSCRIPTION FACTOR 1181–212 PRECURSOR (MTTF1). PMUTA_HUMAN METHYLMALONYL-COA MUTASEPRECURSOR 468–519 (EC 5.4.99.2) (MCM) PMX1_HUMAN INTERFERON-REGULATEDRESISTANCE 108–150 GTP-BINDING PROTEIN MXA (INTERFERON- PMX2_HUMANINTERFERON-REGULATED RESISTANCE 451–489 670–697 GTP-BINDING PROTEIN MXB(P78-RELATED PMYBA_HUMA MYB-RELATED PROTEIN A (FRAGMENT). 619–646PMYBB_HUMAN MYB-RELATED PROTEIN B.  87–117 PMYCN_HUMA N-MYCPROTO-ONCOGENE PROTEIN. 263–300 413–461 PMYC_HUMAN MYC PROTO-ONCOGENEPROTEIN. 393–422 PMYF4_HUMAN MYOGENIC FACTOR MYF-4 (MYOGENIN). 119–146PMYF5_HUMAN MYOGENIC FACTOR MYF-5. 121–148 PMYP2_HUMAN MYELIN P2PROTEIN.  70–110 PMYPR_HUMAN MYELIN PROTEOLIPID PROTEIN (PLP) 43–70(LIPOPHILIN) (CONTAINS: MYELIN PMYSA_HUMAN MYOSIN HEAVY CHAIN, CARDIACMUSCLE 38–75  84–111 137–178 236–324 398–435  440–485 ALPHA ISOFORM(FRAGMENT). PMYSB_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE 48–75 951–981 997–1044 1088–1122 1192–1234  1266–1332 1360–1408 1442–1479 1488–1532BETA ISOFORM. 1541–1582 1640–1681 1683–1710 1801–1838 PMYSE_HUMAN MYOSINHEAVY CHAIN, FAST SKELETAL 46–73 860–903  952–1077 1119–1146 1193–1235 1267–1340 1364–1411 1483–1597 1641–1675 MUSCLE. EMBRYONIC. 1707–17341827–1858 PMYSP_HUMAN MYOSIN HEAVY CHAIN, PERINATAL CARDIAC 50–77 95–125 141–188 215–272 403–483  507–552 585–624 685–736 784–818 MUSCLE(FRAGMENT). 823–907 946–987 1049–1076 PMYSS_HUMAN MYOSIN HEAVY CHAIN,SKELETAL MUSCLE 133–160 193–280 304–349 423–460 468–526  581–608 645–681743–798 808–835 (FRAGMENT). 846–873 PMYT1_HUMAN MYELIN TRANSCRIPTIONFACTOR 1 (MYT1) 640–678 (FRAGMENT). PNACA_HUMAN SODIUM/CALCIUM EXCHANGERPRECURSOR 492–519 594–621 705–735 (NA+/CA2+-EXCHANGE PROTEIN).PNCA2_HUMAN NEURAL CELL ADHESION MOLECULE, 255–282PHOSPHATIDYLINOSITOL-LINKED ISOFORM PNCF1_HUMAN NEUTROPHIL CYTOSOLFACTOR 1 (NCF-47K) 234–261 310–337 (47 KD AUTOSOMAL CHRONIC PNCF2_HUMANNEUTROPHIL NADPH OXIDASE FACTOR  5–32 (P67-PHOX). PNEFA_HUMANDNA-BINDING PROTEIN NEFA PRECURSOR. 50–77  82–112 343–395 PNEP_HUMANNEPRILYSIN (EC 3.4.24.11) (NEUTRAL 170–216 644–671 ENDOPEPTIDASE) (NEP)PNF1_HUMAN NEUROFBROMIN (NEUROFIBROMATOSIS- 1145–1172 1388–14221639–1666 RELATED PROTEIN NF-1) (FRAGMENT). PNFH_HUMAN NEUROFILAMENTTRIPLET H PROTEIN  91–128 431–490 (200 KD NEUROFILAMENT PROTEIN) (NF-H).PNFL_HUMAN NEUROFILAMENT TRIPLET L PROTEIN  92–126 441–468 (68 KDNEUROFILAMENT PROTEIN) (NF-L). PNFM_HUMAN NEUROFILAMENT TRIPLET MPROTEIN (160 101–141 164–194 215–280 315–372 737–764  794–826 872–913 KDNEUROFILAMENT PROTEIN) (NF-M). PNK1R_HUMAN SUBSTANCE-P RECEPTOR (SPR)(NK-1 338–365 RECEPTOR) (NK-1R). PNK4_HUMAN NATURAL KILLER CELLS PROTEIN4 166–193 PRECURSOR. PNKCR_HUMAN NK-TUMOR RECOGNITION PROTEIN 187–214448–475 559–599 701–742 816–843  1080–1133 (NATURAL-KILLER CELLSCYCLOPHILIN- PNKGA_HUMAN NKG2-A AND NKG2-B TYPE II INTEGRAL 28–55MEMBRANE PROTEINS, PNOS1_HUMAN NITRIC-OXIDE SYNTHASE, BRAIN 359–4161116–1146 1292–1319 (EC 1.14.13.39) (NOS. TYPE 1). PNOS3_HUMANNITRIC-OXIDE SYNTHASE, ENDOTHELIAL 389–416 (EC 1.14.13.39) (EC-NOS)(NOS, PNTG1_HUMAN SODIUM- AND CHLORIDE-DEPENDENT GABA 131–158TRANSPORTER 1. PNTR_HUMAN NEUROTENSIN RECEPTOR (NT-R). 57–84 PNTSE_HUMANSODIUM-DEPENDENT SEROTONIN TRANSPORTER 71–98 (5HT TRANSPORTER) (5HTT).PNTTA_HUMAN SODIUM- AND CHLORIDE-DEPENDENT TAURINE 120–147 TRANSPORTER,PNU2M_HUMAN NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2 202–240 (EC 1.6.5.3).PNU4M_HUMAN NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 164–191 372–399 (EC1.6 5.3). PNUBN_HUMAN NUCLEOBINDIN PRECURSOR, 46–73 360–387 PNUCL_HUMANNUCLEOLIN (PROTEIN C23). 462–508 PNY3R_HUMAN PUTATIVE NEUROPEPTIDE YRECEPTOR 115–142 TYPE 3 (NPY3-R) (FB22) (NPYRL). POAT_HUMAN ORNITHINEAMINOTRANSFERASE PRECURSOR  98–128 (EC 2.6.1.13) (ORNITHINE-OXO-POC3A_HUMAN OCTAMER-BINDING TRANSCRIPTION FACTOR 139–173 3A (OCT-3A).POC3B_HUMAN OCTAMER-BINDING TRANSCRIPTION FACTOR 37–78 3B (OCT-3B).POCRL_HUMAN LOWE'S OCULOCEREBRORENAL SYNDROME 704–735 PROTEIN.PODB2_HUMAN LIPOAMIDE ACYLTRANSFERASE COMPONENT 100–127 375–402 (E2)PRECURSOR OF BRANCHED-CHA PODP2_HUMAN DIHYDROLIPOAMIDE ACETYLTRANSFERASE72–99 COMPONENT (E2) OF PYRUVATE POMGP_HUMAN OLIGODENDROCYTE-MYELINGLYCOPROTEIN 53–80 PRECURSOR (OMG). POPSB_HUMAN BLUE-SENSITIVE OPSIN(BLUE CONE 220–247 PHOTORECEPTOR PIGMENT). POPSG_HUMAN GREEN-SENSITIVEOPSIN (GREEN CONE  90–117 239–266 PHOTORECEPTOR PIGMENT). POPSR_HUMANRED-SENSITIVE OPSIN (RED CONE  90–117 239–266 PHOTORECEPTOR PIGMENT).POSTP_HUMAN OSTEOPONTIN PRECURSOR (BONE 239–266 SIALOPROTEIN 1) (URINARYSTONE PROTEIN) POTC_HUMAN ORNITHINE CARBAMOYLTRANSFERASE 170–204PRECURSOR (EC 2.1.3.3). POTNC_HUMAN OSTEONECTIN PRECURSOR (BASEMENT173–207 MEMBRANE PROTEIN BM-40). POXYB_HUMAN OXYSTEROL-BINDING PROTEIN. 89–123 190–217 290–317 577–604 POXYR_HUMAN OXYTOCIN RECEPTOR (OT-R).350–377 PP107_HUMAN RETINOBLASTOMA-ASSOCIATED PROTEIN-LIKE 159–186422–449 107 KD HOMOLOG (P107) PP1DP_HUMAN DNA POLYMERASE ALPHAHOLOENZYME- 19–60 637–664 ASSOCIATED PROTEIN P1. PP47_HUMAN PLECKSTRIN(P47). 298–325 PP4HA_HUMAN PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 29–69191–218 PRECURSOR (EC 1.14.11.2). PP60_HUMAN MITOCHONDRIAL MATRIXPROTEIN P1 72–99 271–298 361–407 PRECURSOR (P60 LYMPHOCYTE PROTEIN)PP85A_HUMAN PHOSPHATIDYLINOSITOL 3-KINASE 12–39 428–476 586–613 688–715REGULATORY ALPHA SUBUNIT (P13-KINASE PPAP1_HUMAN PANCREATITIS ASSOCIATEDPROTEIN 1  77–104 PRECURSOR. PPAX5_HUMAN PAIRED BOX PROTEIN PAX-5(B-CELL 157–187 SPECIFIC TRANSCRIPTION FACTOR) PPDGA_HUMANPLATELET-DERIVED GROWTH FACTOR, A 38–65 CHAIN PRECURSOR (PDGF A-CHAIN)PPEC1_HUMAN PLATELET ENDOTHELIAL CELL ADHESION 685–719 MOLECULEPRECURSOR (PECAM-1) PPENK_HUMAN PROENKEPHALIN A PRECURSOR. 142–176PPERE_HUMAN EOSINOPHIL PEROXIDASE PRECURSOR 308–335 (EC 1.11.1.7) (EPO)(FRAGMENT). PPERF_HUMAN PERFORIN 1 PRECURSOR (P1) (LYMPHOCYTE 411–438PORE FORMING PROTEIN) (PFP) PPF4L_HUMAN PLATELET BASIC PROTEIN PRECURSOR21–55 (PBP) (CONTAINS: CONNECTIVE-TISSUE PPGCA_HUMAN CARTILAGE-SPECIFICPROTEOGLYCAN CORE  73–100 PROTEIN PRECURSOR (CSPCP) PPGCS_HUMAN LARGEFIBROBLAST PROTEOGLYCAN 64–98 1390–1417 1553–1580 PRECURSOR (VERSICAN)(CHONDROITIN PPGDH_HUMAN 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE  87–118(NAD(+)) (EC 1.1.1.141) (PGDH). PPGDR_HUMAN BETA PLATELET-DERIVED GROWTHFACTOR 294–321 354–384 465–495 RECEPTOR PRECURSOR (EC 2.7.1.112).PPGDS_HUMAN ALPHA PLATELET-DERIVED GROWTH FACTOR 64–94 347–395 461–488524–551 986–1058 RECEPTOR PRECURSOR PPGHS_HUMAN PROSTAGLANDIN G/HSYNTHASE PRECURSOR 331–358 (EC 1.14.99.1) (CYCLOOXYGENASE) PPGS1_HUMANBONE/CARTILAGE PROTEOGLYCAN I 100–127 PRECURSOR (BIGLYCAN) (PG-S1).PPH4H_HUMAN PHENYLALANINE-4-HYDROXYLASE 239–266 (EC 1.14.16.1) (PAH)(PHE-4- PPHB_HUMAN PROHIBITIN. 41–61 PPHOS_HUMAN PHOSDUCIN (33 KDPHOTOTRANSDUCING 184–225 PROTEIN) (MEKA PROTEIN). PPHS1_HUMAN GLYCOGENPHOSPHORYLASE, LIVER FORM 116–143 (EC 2.4.1.1). PPHS2_HUMAN GLYCOGENPHOSPHORYLASE, MUSCLE FORM 532–559 (EC 2.4.1.1). PPHS3_HUMAN GLYCOGENPHOSPHORYLASE, BRAIN FORM 533–560 (EC 2.4.1.1). PPIP4_HUMAN1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 908–935 PHOSPHODIESTERASE BETA 2PPIP5_HUMAN 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 142–169 139–266PHOSPHODIESTERASE GAMMA 2 PPLAK_HUMAN PLAKOGLOBIN (DESMOPLAKIN III).373–400 PPLSL_HUMAN L-PLASTIN (FIMBRIN). 507–534 PPLST_HUMAN T-PLASTIN(FIMBRIN). 510–561 PPM22_HUMAN PERIPHERAL MYELIN, PROTEIN 22  3–33(PMP-22). PPMGB_HUMAN PHOSPHOGLYCERATEMUTASE, BRAIN FORM  81–111 (EC5.4.2.1) (PGAM-B) (EC 5.4.2.4) PPMGM_HUMA PHOSPHOGLYCERATEMUTASE, MUSCLE 81–115 FORM (EC 5.4.2.1) (PGAM-M) PPML1_HUMAN PROBABLE TRANSCRIPTIONFACTOR 551–585 PML-1. PPMLX_HUMAN PROBABLE TRANSCRIPTION FACTOR 551–585PML-X. PPMSC_HUMAN AUTOANTIGEN PM-SCL. 103–130 PPOGA_HUMAN DNA-BINDINGPROTEIN PO-GA. 14–51 182–209 610–637 667–699 PPOL1_HUMANRETROVIRUS-RELATED POL POLYPROTEIN 774–804 (REVERSE TRANSCRIPTASEPPOL2_HUMAN RETROVIRUS-RELATED POL POLYPROTEIN  78–138 171–205(FRAGMENT). PPOR1_HUMAN OUTER MITOCHONDRIAL MEMBRANE PROTEIN 33–76189–216 PORIN (VOLTAGE-DEPENDENT ANIO PPPAP_HUMAN PROSTATIC ACIDPHOSPHATASE PRECURSOR 235–269 (EC 3.1.3.2). PPPAS_HUMAN RED CELL ACIDPHOSPHATASE 1, ISOZYME S 26–53 (EC 3.1.3.2) (ACP1). PPPOL_HUMAN NAD(+)ADP-RIBOSYLTRANSFERASE 699–729  972–1003 (EC 2.4.2.30) (POLY(ADP-RIBOSE) PPRC2_HUMAN PROTEASOME COMPONENT C2 (EC 3.4.99.46) 39–66(MACROPAIN SUBUNIT C2) PPRC3_HUMAN PROTEASOME COMPONENT C3 (EC3.4.99.46) 34–61 (MACROPAIN SUBUNIT C3) PPRC9_HUMAN PROTEASOME COMPONENTC9 (EC 3.4.99.46) 203–261 (MACROPAIN SUBUNIT C9) PPRGR_HUMANPROGESTERONE RECEPTOR (PR) 846–890 (FORMS A AND B). PPRTS_HUMAN VITAMINK-DEPENDENT PROTEIN S 337–371 (BLOOD CLOTTING) PRECURSOR. PPRTZ_HUMANVITAMIN K-DEPENDENT PROTEIN Z 29–56 PRECURSOR. PPSOR_HUMAN PSORJASIN.65–92 PPSPD_HUMAN PULMONARY SURFACTANT-ASSOCIATED 224–251 PROTEIN DPRECURSOR (PSP-D) (SP-D). PPTHY_HUMAN PARATHYROID HORMONE PRECURSOR 86–113 (PARATHYRIN). PPTN1_HUMAN PROTEIN-TYROSINE PHOSPHATASE 1B136–177 (EC 3.1.3.48) (PTP-1B). PPTN2_HUMAN T-CELL PROTEIN-TYROSINEPHOSPHATASE 59–86 138–178 (EC 3.1.3.48) (TCPTP). PPTN6_HUMANPROTEIN-TYROSINE PHOSPHATASE 1C 227–261 512–580 (EC 3.1.3.48) (PTP-1C)(HEMATOPOIETIC PPTNB_HUMAN PROTEIN-TYROSINE PHOSPHATASE 2C 41–65 218–245(EC 3.1.3.48) (PTP-2C) (PTP-ID) PPTNC_HUMAN PROTEIN-TYROSINE PHOSPHATASEG1 618–645 695–722 (EC 3.1.3.48) (PTPG1). PPTRR_HUMAN PARATHYROIDHORMONE/PARATHYROID 368–395 HORMONE-RELATED PEPTIDE PPTX3_HUMANPENTAXIN-RELATED PROTEIN PTX3  74–101 PRECURSOR. PPUR2_HUMANPHOSPHORIBOSYLAMINE-GLYCINE LIGASE 803–830 (EC 6.3.4.13) (GARS)(GLYCINAMIDE PPUR6_HUMAN MULTIFUNCTIONAL PROTEIN ADE2H1 391–418(PHOSPHORIBOSYLAMINOIMIDAZOLE- PPUR8_HUMAN ADENYLOSUCCINATE LYASE (EC4.3.2.2) 204–231 (ADENYLOSUCCINASE) (ASL). PPYR5_HUMAN URIDINE5′-MONOPHOSPHATE 120–150 SYNTHASE (UMP SYNTHASE) (OROTATE PPYRG_HUMANCTP SYNTHASE (EC 6.3.4.2) (UTP-AMMONIA  86–113 300–334 LIGASE) (CTPSYNTHETASE). PPZP_HUMAN PREGNANCY ZONE PROTEIN PRECURSOR. 315–354 990–1024 1162–1189 1405–1432 PRA74_HUMAN TRANSCRIPTION FACTOR IIF,ALPHA 474–501 SUBUNIT (TFIIF, ALPHA SUBUNIT) PRAB4_HUMAN RAS-RELATEDPROTEIN RAB-4. 38–65 PRAB6_HUMAN RAS-RELATED PROTEIN RAB-6. 123–150PRAD1_HUMAN RADIXON. 308–335 414–463 510–537 PRB11_HUMAN RAS-RELATEDPROTEIN RAB-11 151–178 (24 KG) (YL8). PRBB3_HUMAN RETINOBLASTOMA BINDINGPROTEIN 3 129–156 161–223 (RBBP-3) (PRB-BINDING PROTEIN E2F-1)PRDP_HUMAN RD PROTEIN.  9–53 PRENI_HUMAN RENIN PRECURSOR, RENAL (EC3.4.23.15) 136–163 (ANGIOTENSINOGENASE). PREST_HUMAN RESTIN (CYTOPLASMICLINKER 190–217 333–370 445–472 571–619 744–771  784–852 1023–10501088–1139 1157–1184 PROTEIN-170 ALPHA-2) (CLIP-170). 1216–1306PRFA1_HUMAN REPLICATION PROTEIN A 70 KD 208–235 425–455 DNA-BINDINGSUBUNIT (RP-A) (RF-A) PRFP_HUMAN TRANSFORMING PROTEIN (RFP) 183–217 (RETFINGER PROTEIN). PRH_HUMAN BLOOD GROUP RH(D) POLYPEPTIDE 361–388PRIB1_HUMAN RIBOPHORIN I PRECURSOR.  11–108 496–530 PRIB2_HUMANRIBOPHORIN II PRECURSOR. 142–172 361–388 PRIR1_HUMANRIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 42–69 370–400 M1 CHAIN (EC1.17.4.1) PRL22_HUMAN 60 S RIBOSOMAL PROTEIN L22 (EPSTEIN-  78–112 BARRVIRUS SMALL RNA ASSOCIATED PRL26_HUMAN 60 S RIBOSOMAL PROTEIN L26. 55–89103–137 PRL9_HUMAN 60 S RIBOSOMAL PROTEIN L9. 146–192 PRLA0_HUMAN 60 SACIDIC RIBOSOMAL PROTEIN PO (L10E). 138–165 PRO5_HUMAN 52 KD RO PROTEIN(SJOGREN SYNDROME 190–235 238–265 TYPE A ANTIGEN (SS-A)). PRO6_HUMAN 60KD RO PROTEIN (SJOGREN SYNDROME 192–245 TYPE A ANTIGEN (SS-A)).PROC_HUMAN HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS 16–43 C1/C2 (HNRNPC1 AND HNRNP PROL_HUMAN HETEROGENEOUS RIBONUCLEOPROTEIN L 501–528(HRNPL). PROU_HUMAN HETEROGENOUS RIBONUCLEOPROTEIN U. 630–657PRPB1_HUMAN DNA-DIRECTED RNA POLYMERASE II 215 269–296 665–720 879–9061314–1341 1371–1398  KD POLYPEPTIDE PRPB2_HUMAN DNA-DIRECTED RNAPOLYMERASE II 140 226–667 1008–1035 KD POLYPEPTIDE PRPB3_HUMANDNA-DIRECTED RNA POLYMERASE II 33 242–274 KD POLYPEPTIDE PRRXA_HUMANRETINOIC ACID RECEPTOR RXR-ALPHA. 318–352 PRRXB_HUMAN RETINOIC ACIDRECEPTOR RXR-BETA 376–403 ISOFORM 1. PRRXC_HUMAN RETINOIC ACID RECEPTORRXR-BETA 396–423 ISOFORM 2 PRS12_HUMAN 40 S RIBOSOMAL PROTEIN S12. 60–87PRS16_HUMAN 40 S RIBOSOMAL PROTEIN S16.  89–116 PRS25_HUMAN 40 SRIBOSOMAL PROTEIN S25. 26–53 PRS27_HUMAN 40 S RIBOSOMAL PROTEIN S27A.14–41 PRS7_HUMAN 40 S RIBOSOMAL PROTEIN S7 (S8).  73–100 PRS8_HUMAN 40 SRIBOSOMAL PROTEIN S8 136–161 PRTC1_HUMAN RAS-LIKE PROTEIN TC21 123–150PRU1A_HUMAN U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 13–47 A (U1 SNRNP APROTEIN) PRU2B_HUMAN U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B* 17–44PRYNR_HUMAN RYANODINE RECEPTOR. SKELETAL MUSCLE 154–188 495–522 866–8932750–2777 2820–2847  3304–3331 3529–3556 3912–3939 4921–4948 PS10A_HUMANS-100 PROTEIN, ALPHA CHAIN 12–54 PS10B_HUMAN S-100 PROTEIN, BETA CHAIN14–56 PS10D_HUMAN S-100D PROTEIN 31–58 PSAHH_HUMANADENOSYLHOMOCYSTEINASE (EC 3.3.1.1) 389–416 (S-ADENOSYL-L-HOMOCYSTEINEPSAT1_HUMAN DNA-BINDING PROTEIN SATB1. 709–736 PSCCA_HUMAN SQUAMOUS CELLCARCINOMA ANTIGEN  78–105 (SCCA) (PROTEIN T4-A) PSCF_HUMAN STEM CELLFACTOR PRECURSOR (SCF)  74–101 PSEM1_HUMAN SEMENOGELIN I PROTEINPRECURSOR (SCI) 64–98 176–226 288–329 314–368 (CONTAINS: SEMINAL BASICPSEM2_HUMAN SEMENOGELIN II PRECURSOR (SGII). 71–98 183–226 304–355405–439 539–575  PSET_HUMAN SET PROTEIN. 38–65 154–181 PSG1_HUMANSECRETOGRANIN I PRECURSOR 144–178 (CHROMOGRANIN B). PSG2_HUMANSECRETOCRANIN II PRECURSOR 254–281 290–317 534–561 (CHROMOGRANIN C).PSIAL_HUMAN BONE SIALOPROTEIN II PRECURSOR  84–113 155–193 256–283 (BSPII) PSN2L_HUMAN POSSIBLE GLOBAL TRANSCRIPTION 231–258 545–572 ACTIVATORSNF2L. PSNOB_HUMAN SKI-RELATED ONCOGENE SNON. 414–441 PSPCA_HUMANSPECTRIN ALPHA CHAIN. 193–220 570–621 655–712 1099–1126 1461–1502 1882–1909 1988–2022 2120–2154 2223–2250 2346–2373 PSPCB_HUMAN SPECTRINBETA CHAIN. ERYTHROCYTE 150–177 316–350 456–520 645–675 987–10211027–1083 1287–1324 1347–1374 1834–1861 PSPRE_HUMAN SEPIAPTERINREDUCTASE (EC 1.1.1.153)  90–124 (SPR). PSRF_HUMAN SERUM RESPONSE FACTOR(SRF)  77–104 480–507 PSRPR_HUMAN SIGNAL RECOGNITION PARTICLE RECEPTOR 76–110 ALPHA SUBUNIT (SR-ALPHA) PSSR1_HUMAN SOMATOSTATIN RECEPTORTYPE 1. 289–316 PSTHM_HUMAN STATHMIN (PHOSPHOPROTEIN P19) 47–74(ONCOPROTEIN P18) (LEUKEMIA-ASSOCIATED PSUIS_HUMAN SUCRASE-ISOMALTASE,INTESTINAL 1748–1775 (EC 3.2.1.48)/(EC 3.2.1.10). PSYB1_HUMANSYNAPTOBREVIN 1. 31–67 PSYD2_HUMAN ASPARTYL-TRNA SYNTHETASE ALPHA-244–71 SUBUNIT (EC 6.1.1.12) (ASPARTATE- PSYEP_HUMAN MULTIFUNCTIONALAMINOACYL-TRNA 174–201 740–771 SYNTHETASE (CONTAINS: GLUTAMYL-TRNPSYH_HUMAN HISTIDYL-TRNA SYNTHETASE (EC 6.1.1.21) 380–442 468–502(HISTIDINE-TRNA LIGASE). PSYT1_HUMAN SYNAPTOTAGMIN 1 (P65). 140–167250–277 PSYTC_HUMAN THREONYL-TRNA SYNTHETASE, CYTOPLASMIC 497–524658–685 (EC 6.1.1.3) (THREONINE-TRNA PSYV_HUMAN VALYL-TRNA SYNTHETASE(EC 6.1.1.9) 230–257 413–440 (VALINE-TRNA LIGASE) (VALRS). PSYW_HUMANTRYPTOPHANYL-TRNA SYNTHETASE  93–127 196–223 (EC 6.1.1.2)(TRYPTOPHAN-TRNA LIGASE) PT2EB_HUMAN TRANSCRIPTION INITIATION FACTOR34–68 IIE-BETA CHAIN (TFIIE-BETA). PTAP4_HUMAN TRANSCRIPTION FACTOR AP-4(FRAGMENT). 169–196 245–272 PTAPB_HUMAN TRANSCRIPTION FACTOR JUN-B.296–323 PTAPD_HUMAN TRANSCRIPTION FACTOR JUN-D. 291–333 PTAU1_HUMANMICROTUBULE-ASSOCIATED PROTEIN TAU. 278–305 PTAU2_HUMANMICROTUBULE-ASSOCIATED PROTEIN TAU 211–238 FETAL. PTCO1_HUMANTRANSCOBALAMIN 1 PRECURSOR. 201–241 330–357 PTCP1_HUMAN T-COMPLEXPROTEIN 1 (TCP-1) 316–343 PTDT_HUMAN DNA NUCLEOTIDYLEXOTRANSFERASE 61–95(EC 2.7.7.31) (TERMINAL ADDITION ENZYME) PTEK_HUMAN RECEPTOR TYROSINEPROTEIN KINASE 644–678 969–996 1007–1036 TEK PRECURSOR (EC 2.7.1.112)(HPK-6) PTF2B_HUMAN TRANSCRIPTION INITIATION FACTOR 135–162 IID (TFIIB).PTFE3_HUMAN TRANSCRIPTION FACTOR E3 (FRAGMENT). 43–70 122–149 178–226PTFS2_HUMAN TRANSCRIPTION ELONGATION FACTOR S-II. 29–56 PTF_HUMAN TISSUEFACTOR PRECURSOR (TF) 148–175 (COAGULATION FACTOR III) PTGF1_HUMANTRANSFORMING GROWTH FACTOR BETA 1 148–185 PRECURSOR (TGF-BETA 1)PTGF2_HUMAN TRANSFORMING GROWTH FACTOR BETA 2 243–270 PRECURSOR(TGF-BETA 2) (GLIOBLASTO PTGFA_HUMAN TRANSFORMING GROWTH FACTOR ALPHA 87–114 PRECURSOR (TGF-ALPHA) (EGF-LIKE TGH PTGLK_HUMANPROTEIN-GLUTAMINE GAMMA- 258–285 GLUTAMYLTRANSFERASE K (EC 2.3 2.13)PTHBS_HUMAN THROMDOSPONDIN PRECURSOR. 110–165 284–314 PTH1K_HUMAN3-KETOACYL-COA THIOLASE PEROXISOMAL 185–212 PRECURSOR (EC 2.3.1.16)(BETA- PTKNB_HUMAN PROTACHYKININ BETA PRECURSOR 11–38 (CONTAINS:SUBSTANCE P, NEUROKININ A PTLE1_HUMAN TRANSDUCIN-LIKE ENHANCERPROTEIN 1. 626–653 PTLE2_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 2. 94–125 PTLE4_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 4 304–331(FRAGMENT). PTOPA_HUMAN DNA TOPOISOMERASE II, ALPHA ISOZYME 19–46503–532 (EC 5.99.1.3). PTOPB_HUMAN DNA TOPOISOMERASE II, BETA ISOZYME35–65 616–647 (EC 5.99.1.3). PTPM3_HUMAN TROPOMYOSIN, FIBROBLAST ISOFORMTM3. 16–74  82–116 PTPMA_HUMAN TROPOMYOSIN ALPHA CHAIN, SKELETAL 16–4347–74  82–116 147–174 191–237  243–277 MUSCLE. PTPMB_HUMAN TROPOMYOSINBETA CHAIN. SKELETAL  37–116 193–240 MUSCLE. PTPMC_HUMAN TROPOMYOSINALPHA CHAIN. CARDIAC 16–74  82–116 193–277 MUSCLE PTPMF_HUMANTROPOMYOSIN, FIBROBLAST AND EPITHELIAL  37–116 210–240 243–270MUSCLE-TYPE (TM36) (TME1) PTPMG_HUMAN TROPOMYOSIN, FIBROBLAST NON-MUSCLE46–80 111–138 158–199 207–234 TYPE (TM30PL). PTPMI_HUMAN TROPOMYOSIN,CYTOSKELETAL TYPE 46–80 111–138 172–199 (TM30NM). PTPMS_HUMANTROPOMYOSIN ALPHA CHAIN. SMOOTH 25–59 147–178 MUSCLE (FRAGMENT)PTPP2_HUMAN TRIPEPTIDYL-PEPTIDASE II 153–187 1004–1031 1160–1187 (EC3.4.14.10) (TPP II) (TRIPEPTIDYL PTPR_HUMAN TPR ONCOGENE (FRAGMENT). 82–147 PTR36_HUMAN TREB36 PROTEIN. 15–45 242–269 PTRFR_HUMANTHYROTROPIN-RELEASING HORMONE 349–383 RECEPTOR (TRH-R) (THYROLIBERINPTRIC_HUMAN TROPONIN I, CARDIAC MUSCLE. 36–63 PTRKA_HUMAN HIGH AFFINITYNERVE GROWTH FACTOR 66–93 117–148 RECEPTOR PRECURSOR (EC 2.7.1.112)PTRSR_HUMAN TRANSFERRIN RECEPTOR PROTEIN (TR) 188–215 366–393 (ANTIGENCD71) (T9). PTSKR_HUMAN THYROTROPIN RECEPTOR PRECURSOR  87–117 420–447(TSH-R). PTTK_HUMAN PROTEIN KINASE TKK (EC 2.7.1.-). 170–197 324–359510–544 549–583 PTYK2_HUMAN NON-RECEPTOR TYROSINE-PROTEIN 150–177 KINASETYK2 (EC 2.7.1.112). PUBA1_HUMAN UBIQUITIN-ACTIVATING ENZYME E1 448–475(A159 PROTEIN). PUBF1_HUMAN NUCLEOLAR TRANSCRIPTION FACTOR 1 227–254(UPSTREAM BINDING FACTOR 1) (UBF-1). PUDP0_HUMANUDP-GLUCURONOSYLTRANSFERASE 227–254 PRECURSOR, MICROSOMAL (EC 2.4.1.17)PUFO_HUMAN RECEPTOR TYROSINE-PROTEIN KINASE 488–522 UFO PRECURSOR (EC2.7.1.112). PUSF1_HUMAN UPSTREAM STIMULATORY FACTOR 1. 251–295PVATC_HUMAN VACUOLAR ATP SYNTHASE SUBUNIT C 47–74 117–147 (EC 3.6.1.34)(V-ATPASE C SUBUNIT) PVIL1_HUMAN VILLIN. 338–372 427–461 717–744PVIME_HUMAN VIMENTIN. 119–146 233–260 PVINC_HUMAN VINCULIN. 101–135PVPRT_HUMAN RETROVIRUS-RELATED PROTEASE  95–134 (EC 3.4.23.-).PWEE1_HUMAN WEE1-LIKE PROTEIN KINASE 354–388 (EC 1.7.1.112) PWT1_HUMANWILMS' TUMOR PROTEIN (WT33). 247–274 PXBP1_HUMAN X BOX BINDING PROTEIN-1(XBP-1)  97–135 (TREB5 PROTEIN). PXPAC_HUMAN DNA-REPAIR PROTEINCOMPLEMENTING XP-A 180–211 CELLS (XERODERMA PIGMENTOSUM PXPCC_HUMANDNA-REPAIR PROTEIN COMPLEMENTING XP-C 134–168 701–728 CELLS (XERODERMAPIGMENTOSUM PXPDC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-D 264–291CELLS (XERODERMA PIGMENTOSUM PXPGC_HUMAN DNA-REPAIR PROTEINCOMPLEMENTING XP-G  83–110 715–766 1047–1081 CELLS (XERODERMAPIGMENTOSUM PXRCC_HUMAN DNA-REPAIR PROTEIN XRCC1. 23–57 PZN10_HUMAN ZINCFINGER PROTEIN 10 (ZINC FINGER 23–56 PROTEIN KOXI) (FRAGMENT).PZN40_HUMAN ZINC FINGER PROTEIN 40 (HUMAN 17–62 307–334 1071–10981469–1500 2013–2057  2146–2180 IMMUNODEFICIENCY VIRUS TYPE 1 ENHANCER-PZN45_HUMAN ZINC FINGER PROTEIN 45 (BRC1744)  3–30 201–228 (FRAGMENT).PZN46_HUMAN ZINC FINGER PROTEIN 46 (ZINC FINGER 121–149 PROTEIN KUP).

TABLE X Search Results Summary for PCTLZIP, P1CTLZIP, and P2CTLZIPMotifs PCTLZIP LIBRARY FILE PENV_POAMV 481–496 PENV_HV1MA 438–453PENV_HV1MP 183–198 PENV_HV1RH 445–460 PENV_HV18C 186–201 PENV_HV1Z2123–138 PENV_HV1ZH 448–453 PENV_HV2BE 750–785 PENV_HV2D1 741–750PENV_HV2G1 741–756 PENV_HV2NZ 742–757 PENV_HV2RO 751–766 PENV_HV2SB743–758 PENV_HV2ST 745–750 PENV_JSRV 104–119 PENV_MMTVB 618–633PENV_MMTVG 618–633 PENV_8IVMK 139–164 PENV_8IVML 139–164 PHEMA_CVBLY391–406 PHEMA_CVBM 391–406 PHEMA_CVBQ 391–406 PHEMA_CVHOC 391–406PHEMA_CVMA5 402–417 PHEMA_CVMS 403–418 PHEMA_INBAA 295–310 PHEMA_INBBE303–316 PHEMA_INBBO 293–306 PHEMA_INBEN 301–316 PHEMA_INBFU 286–301PHEMA_INBGL 296–311 PHEMA_INBHK 293–308 PHEMA_INBIB 288–303 PHEMA_INBID299–314 PHEMA_INBLE 302–317 PHEMA_INBMD 292–307 PHEMA_INBME 295–311PHEMA_INBNA 288–303 PHEMA_INBOR 301–316 PHEMA_INBB1 301–316 PHEMA_INBSJ298–313 PHEMA_INBUB 294–309 PHEMA_INBV1 296–311 PHEMA_INBVK 303–318PHEMA_INBYB 266–301 PHEMA_MUMPM 133–148 PHEMA_MUMPR 133–148 PHEMA_MUMPS133–148 PHEMA_PI1HW 345–360 PHEMA_PI2H 65–80 PHEMA_PI2HT 65–80PHEMA_RINDK 338–383 PHEMA_SV5  7–94 PHEMA_SV5CM  7–94 PHEMA_SV5CP  7–94PHEMA_SV5LN  7–94 PVENV_DHVI1 42–57 PVFP7_CAPVK  89–104 PVFU8_VACC672–87 PVG01_BPP22 242–257 PVG01_HSVEB 189–184 PVG01_HSVI1 210–225317–332 PVG06_BPT4 184–199 PVG07_BPT4 885–900 PVG08_H8V11 134–149PVG10_BPPH2 183–198 PVG10_BPPZA 183–198 PVG10_HSVSA 109–124 PVG16_BPP181–96 PVG18_BPT4 468–483 PVG25_BPT4  97–112 PVG29_H8V11 20–36PVG30_BPPH8 11–94 PVG36_BPOX2 22–37 PVG36_H8VBA 108–123 PVG37_BPT21253–1268 PVG37_HSVI1 284–299 PVG55_HSVI1 22–37 143–158 PVG56_HSVI1268–283 PVG58_HSVI1 102–117 PVG59_HSVI1 267–282 PVG65_HSVI1 518–533PVG9_BPPH2 234–249 PVG9_BPPZA 234–249 PVG9_BPV1R 57–72 PVGF_BPPHX234–249 PVGL2_CVBF 264–279 PVGL2_CVBL9 264–279 PVGL2_CVBLY 264–279PVGL2_CVBM 264–279 PVGL2_CVBQ 264–279 PVGL2_CVBV 264–279 PVGL2_CVPFS442–457 PVGL2_CVPPU 440–455 504–519 PVGL2_CVPR8 218–233 PVGL2_CVPRM218–233 PVGL2_IBV6 1056–1071 PVGL2_IBVB 1055–1070 PVGL2_ISVD2 1056–1071PVGL2_IBVK 1055–1070 PVGL2_IBVM 1055–1070 PVGLB_HSVBA 701–716PVGLB_PRVIF 203–218 PVGLC_HSVBC 475–490 PVGLC_HSVE4 444–459 PVGLC_HSVEB427–442 PVGLC_PRVIF 446–461 PVGLD_HSV11 79–94 PVGLD_HSV2 79–94PVGLF_BRSVA 265–280 PVGLF_BRSVC 265–280 PVGLF_BRSVR 265–280 PVGLF_HRSV1265–280 PVGLF_HRSVA 265–280 PVGLF_HRSVL 265–280 PVGLF_HRSVH 265–280PVGLF_MUMPS  5–94 PVGLI_VZVD 278–293 PVGLM_HANTB 900–915 PVGLM_PTPV743–758 PVGLM_BEOUR 901–916 PVGLM_BEOUS 900–915 PVGLY_LA88G 426–441PVGLY_LA88J 427–442 PVGLY_MOPEI 425–440 PVM3_REOVD 521–536 PVMSA_HPBG8380–396 PVMBA_HPBV9 187–202 PVMSA_WHV1 378–393 PVMSA_WHV59 383–398PVMSA_WHV7 383–398 PVMSA_WHV8 383–398 PVMSA_WHV8I 383–398 PVMSA_WHVW6234–249 PVMT2_IAANN 25–40 PVMT2_IABAN 25–40 PVMT2_IAFOW 25–40PVMT2_IAFPR 25–40 PVMT2_IAPPW 25–40 PVMT2_IALE1 25–40 PVMT2_IALE2 25–40PVMT2_IAMAN 25–40 PVMT2_IAPUE 25–40 PVMT2_IASIN 25–40 PVMT2_IAUDO 25–40PVMT2_IAWIL 25–40 PVMT9_MYXVL 226–241 P1CTLZIP LIBRARY FILE PENV_BIV08434–450 PENV_BIV27 463–479 PENV_FOAMV 481–496 864–880 PENV_HV1KB 752–768PENV_HV1MA 437–453 PENV_HV1MP 183–198 PENV_HV1RH 444–460 PENV_HV1B1738–754 PENV_HV18C 180–201 PENV_HV1Z2 123–138 PENV_HV1Z3 117–133PENV_HV1ZH 437–453 PENV_HV2BE 750–765 PENV_HV2D1 741–756 PENV_HV2G1741–756 PENV_HV2NZ 742–757 PENV_HV2RO 751–768 PENV_HV2SB 743–758PENV_HV2ST 745–760 PENV_JSRV 104–119 541–557 PENV_MCFF 397–413PENV_MCFF3 397–413 PENV_MLVAV 427–443 PENV_MLVCB 422–438 PENV_MLVHO423–439 PENV_MLVMO 425–442 PENV_MLVRD 424–440 PENV_MLVRK 424–440PENV_MMTVB 618–633 PENV_MMTVG 618–633 PENV_8FV1 664–880 PENV_8FV3L661–877 PENV_8IVGB  93–109 PENV_BIVMK 139–154 802–818 PENV_8IVML 139–154801–817 PENV_8IVS4 806–822 PENV_8IV8P 810–826 PHEMA_CDVO 38–52PHEMA_CVBLY 391–406 PHEMA_CVBM 391–406 PHEMA_CVBQ 391–406 PHEMA_CVHOC391–406 PHEMA_CVMA5 402–417 PHEMA_CVM8 403–418 PHEMA_IAAIC 237–253PHEMA_IABAN 221–237 PHEMA_IABUD 234–250 PHEMA_IACKA 234–250 PHEMA_IACKG231–247 PHEMA_IACKV 230–248 PHEMA_IADA1 234–250 PHEMA_IADA3 237–253PHEMA_IADCZ 234–250 PHEMA_IADH1 221–237 PHEMA_IADH2 221–237 PHEMA_IADH3221–237 PHEMA_IADH4 221–237 PHEMA_IADH6 221–237 PHEMA_IADH8 221–237PHEMA_IADH7 221–237 PHEMA_IADM2 237–253 PHEMA_IADNZ 234–250 PHEMA_IAEN6221–237 PHEMA_IAEN7 237–253 PHEMA_IAFPR 230–246 PHEMA_IAHAL 238–252PHEMA_IAHAR 235–251 PHEMA_IAHC8 230–246 PHEMA_IAHC7 230–246 PHEMA_IAHCD230–246 PHEMA_IAHDE 230–246 PHEMA_IAHFO 236–252 PHEMA_IAHK6 236–252PHEMA_IAHK7 236–252 PHEMA_IAHLE 230–246 PHEMA_IAHLO 230–246 PHEMA_IAHMI236–252 PHEMA_IAHNM 236–252 PHEMA_IAHRO 236–252 PHEMA_IAHSA 236–252PHEMA_IAHSP 230–246 PHEMA_IAHSW 230–246 PHEMA_IAHTE 236–252 PHEMA_IAHTO236–252 PHEMA_IAHUR 236–252 PHEMA_IAKIE 235–251 PHEMA_IALEN 235–251PHEMA_IAMAA 233–249 PHEMA_IAMAB 238–254 PHEMA_IAMAO 237–253 PHEMA_IAME1237–253 PHEMA_IAME2 237–253 PHEMA_IAME8 221–237 PHEMA_IAMIN  85–101231–247 PHEMA_IANT6 237–263 PHEMA_IAQU7 221–237 PHEMA_IARUD 234–250PHEMA_IABE2 234–250 PHEMA_IASH2 234–250 PHEMA_IASTA 230–246 PHEMA_IATAI235–251 PHEMA_IATKM 234–250 PHEMA_IATKO 233–249 PHEMA_IATKR 230–246PHEMA_IATKW 229–245 PHEMA_IAUDO 237–253 PHEMA_IAUSS 235–251 PHEMA_IAV17238–254 PHEMA_IAX1A 235–251 PHEMA_IAZCO 237–253 PHEMA_IAZH2 221–237PHEMA_IAZH3 221–237 PHEMA_IAZUK 237–253 PHEMA_INBAA 115–131 295–310PHEMA_INBBE 123–139 303–318 PHEMA_INBBO 116–132 293–308 PHEMA_INBEN123–139 301–316 PHEMA_INBFU 108–124 286–301 PHEMA_INBGL 119–135 296–311PHEMA_INBHK 118–132 293–308 PHEMA_INBIB 108–124 288–303 PHEMA_INBID120–136 299–314 PHEMA_INBLE 123–139 302–317 PHEMA_INBMD 113–129 292–307PHEMA_INBME 116–132 296–311 PHEMA_INBNA 108–124 288–303 PHEMA_INBOR123–139 301–318 PHEMA_INB81 123–139 301–318 PHEMA_INBSJ 119–135 296–313PHEMA_INBU8 116–132 294–309 PHEMA_INBV1 116–132 296–311 PHEMA_INBVK123–139 303–318 PHEMA_INBYB 108–124 286–301 PHEMA_MUMPM 133–148PHEMA_MUMPR 133–148 PHEMA_MUMP8 133–148 PHEMA_PI1HW 345–360 PHIMA_PI2H65–81 PHEMA_PI2HT 65–61 PHEMA_PI3B 324–340 PHEMA_PI3H4 324–340PHEMA_PI3HA 324–340 PHEMA_PI3HT 324–340 PHEMA_PI3HU 324–340 PHEMA_PI3HV324–340 PHEMA_PI3HW 324–340 PHEMA_PI3HX 324–340 PHEMA_RINDK 368–383PHEMA_BV5  7–94 PHEMA_BV5CM  7–94 PHEMA_BV5CP  7–94 PHEMA_BV5LN  7–94PVENV_DHVI1 42–57 PVENV_EAV 25–41 PVFP2_FOWPV  88–104 PVFP7_CAPVK 89–104 PVFUS_VACC6 72–87 PVG01_HSVEB 169–184 PVG01_HSVI1 209–225317–332 PVG08_HSV11 134–149 PVG10_HSVSA 109–124 PVG11_HSVI1 103–119PVG12_HSVI1 270–286 PVG1_SPV1R 76–92 PVG29_HSVI1 20–35 PVG86_BPOX2 22–37PVG36_H8V8A 108–123 PVG37_H8VI1 284–299 PVG41_HSVI1 244–260 PVG46_HSVI11244–1260 PVG55_HSVI1 22–37 143–158 PVG58_HSVI1 266–283 PVG58_HSVI1101–117 PVG58_HSVSA 130–146 330–346 PVG59_HSVI1 267–282 PVG65_HSVI1362–378 518–533 PVG71_HSVSA  89–105 PVG9_BPPH2 234–249 PVG9_BPPZA234–249 PVG9_8PV1R 57–72 PVGF1_IBVB 2210–2226 PVGL2_CVBF 123–139 174–190264–279 PVGL2_CVBL9 123–139 174–190 264–279 PVGL2_CVBLY 123–139 174–180264–279 PVGL2_CVBM 123–139 174–190 264–279 PVGL2_CVBQ 31–47 123–139174–190 264–279 PVGL2_CVBV 123–139 174–180 204–279 PVGL2_CVM4  95–1111287–1283 PVGL2_CVMA5  95–111 1215–1231 PVGL2_CVMJH  95–111 1128–1142PVGL2_CVPFS 442–457 800–810 1274–1290 PVGL2_CVPPU 440–455 604–519798–814 1272–1288 PVGL2_CVPR8 217–233 576–582 1050–1066 PVGL2_CVPRM218–233 576–592 1050–1066 PVGL2_FIPV 803–819 1277–1293 PVGL2_IBV61056–1071 PVGL2_IBVB 1056–1070 PVGL2_IBVD2 1056–1071 PVGL2_IBVK1055–1070 PVGL2_IBVM 1055–1070 PVGLB_HSVSA 701–716 PVGLB_PRVIF 203–218PVGLB_VZVD 522–538 PVGLC_HSVBC 475–490 PVGLC_HSVE4 444–459 PVGLC_HSVEB427–442 PVGLC_PRVIF 446–461 PVGLC_VZVD 150–166 PVGLC_VZVS 150–166PVGLD_HSV11 79–94 PVGLD_HSV2 79–94 PVGLE_PRVRI  3–94 PVGLF_BRSVA 205–221266–280 PVGLF_BRSVC 205–221 266–280 PVGLF_BRSVR 205–221 206–280PVGLF_COVO 398–414 PVGLF_HR5V1 205–221 206–280 PVGLF_HRBVA 205–221265–280 PVGLF_HRSVL 205–221 265–280 PVGLF_HRSVR 205–221 265–280PVGLF_MEASE 286–302 PVGLF_MEASI 289–305 PVGLF_MEASY 286–302 PVGLF_MUMPM276–292 PVGLF_MUMPR 276–292 PVGLF_MUMPS  5–94 278–292 PVGLF_NDVA 273–289PVGLF_NDVB 273–289 PVGLF_NDVM 273–289 PVGLF_NDVT 273–289 PVGLF_NDVTG273–289 PVGLF_NDVU 273–289 PVGLF_PHODV 269–285 387–383 PVGLF_RINDK282–298 PVGLF_RINDL 282–298 PVGLF_TRTV 175–191 PVGLI_VZVD 278–293PVGLM_HANTB 355–371 900–915 PVGLM_HANTH 499–515 PVGLM_HANTL 499–515PVGLM_HANTV 499–515 PVGLM_PTPV 743–758 PVGLM_PUUMH 509–525 PVGLM_PUUMS509–525 PVGLM_SEOUR 355–371 901–916 PVGLM_SEOUS 355–371 900–915PVGLM_UUK 828–842 PVGLP_BEV 869–886 PVGLY_LASSQ 12–94 425–441PVGLY_LASSJ 12–94 427–442 PVGLY_LYCVA 12–94 PVGLY_LYCVW 12–94PVGLY_MOPE1 12–94 425–440 PVGLY_PIARV 12–94 PVGNM_CPMV 1021–1037PVM3_REOVD 521–536 PVMAT_MUMPS 191–207 PVMAT_NDVA 135–161 PVMAT_NDVB135–161 PVMAT_PI2HT 189–205 PVMAT_SV41 189–205 PVMAT_SV5  99–114 132–148PVMP_CAMVC 116–134 PVMP_CAMVD 116–134 PVMP_CAMVE 116–134 PVMP_CAMVN116–134 PVMP_CAMVS 116–134 PVMP_CAMVW 116–134 PVMP_FMVD 115–131PVMSA_HPBG3 380–395 PVMSA_HPBV9 187–202 PVMSA_WHV1 378–393 PVMSA_WHV59383–398 PVMSA_WHV7 383–398 PVMSA_WHV8 383–398 PVMSA_WHV8I 383–398PVMSA_WHVW6 234–249 PVMT2_IAANN 25–40 PVMT2_IABAN 25–40 PVMT2_IAPOW25–40 PVMT2_IAFPR 25–40 PVMT2_IAFPW 25–40 PVMT2_IALE1 25–40 PVMT2_IALE225–40 PVMT2_IAMAN 25–40 PVMT2_IAPUE 25–40 PVMT2_IASIN 25–40 PVMT2_IAUDO25–40 PVMT2_IAWIL 25–40 PVMT9_MYXVL 226–241 P2CTLZIP LIBRARY FILEPENV_BIV06 525–542 PENV_BIV27 554–571 PENV_FENV1 30–47 630–647PENV_FIVPE 781–798 PENV_FIVSD 779–796 PENV_FIVT2 780–797 PENV_FLVC638–55 624–641 PENV_FLVGL 605–622 PENV_FLVLB 625–642 PENV_FLVBA 602–619PENV_FOAMV 710–727 957–974 PENV_F8VGA 625–642 PENV_F8VGB 605–622PENV_F8VBM 608–625 PENV_HV1OY 123–140 PENV_HV122 410–427 PENV_HV1Z3154–171 PENV_HV2CA 750–767 PENV_MCFF 600–617 PENV_MCFF3 601–618PENV_MLVAV 630–647 PENV_MLVCB 625–642 PENV_MLVF6 639–656 PENV_MLVFF639–656 PENV_MLVFP 639–656 PENV_MLVHO 626–643 PENV_MLVKI 167–184PENV_MLVMO 629–648 PENV_MLVRD 624–641 PENV_MLVRK 624–641 PENV_M8VFB170–187 PENV_RMCFV 603–620 PENV_SFV1 710–727 957–974 PENV_SFV3L 707–724954–971 PENV_SIVM1 768–783 PENV_S1VMK 765–782 PENV_S1VML 764–781PENV_S1V84 769–786 PENV_S1V8P 773–790 PENV_SMRVH 636–663 PENV_SMSAV42–59 PHEMA_CDVO 35–53 200–217 PHEMA_CVBLY 391–408 PHEMA_CVBM 391–408PHEMA_CVBQ 391–408 PHEMA_CVHOC 391–408 PHEMA_IAAIC 322–339 PHEMA_IABAN306–323 PHEMA_IABUD 320–337 PHEMA_IACKA 320–337 PHEMA_IACKG 316–333PHEMA_IACKP 302–319 PHEMA_IACKQ 302–319 PHEMA_IACKS 319–336 PHEMA_IACKV315–332 PHEMA_IADA1 320–337 PHEMA_IADA3 322–339 PHEMA_IADCZ 320–337PHEMA_IADH1 306–323 PHEMA_IADH2 306–323 PHEMA_IADH3 306–323 PHEMA_IADH4306–323 PHEMA_IADH6 306–323 PHEMA_IADH7 306–323 PHEMA_IADM2 322–339PHEMA_IADNZ 320–337 PHEMA_IADU3 322–339 PHEMA_IAEN6 306–323 PHEMA_IAEN7322–339 PHEMA_IAFPR 315–332 PHEMA_IAGRE 320–337 PHEMA_IAGU2 320–337PHEMA_IAGUA 319–336 PHEMA_IAHAL 321–338 PHEMA_IAHC6 315–332 PHEMA_IAHC7315–332 PHEMA_IAHCD 315–332 PHEMA_IAHDE 315–332 PHEMA_IAHFO 321–338PHEMA_IAHK6 321–338 PHEMA_IAHK7 321–338 PHEMA_IAHLE 315–332 PHEMA_IAHLO315–332 PHEMA_IAHMI 321–338 PHEMA_IAHNM 321–338 PHEMA_IAHNN 315–332PHEMA_IAHPR 315–332 PHEMA_IAHRO 321–338 PHEMA_IAHBA 321–338 PHEMA_IAHBP315–332 PHEMA_IAHBW 315–332 PHEMA_IAHTE 321–338 PHEMA_IAHTO 321–338PHEMA_IAHUR 321–338 PHEMA_IAJAP 317–334 PHEMA_IAMAA 319–336 PHEMA_IAMAB324–341 PHEMA_IAMAO 322–339 PHEMA_IAME1 322–339 PHEMA_IAME2 322–339PHEMA_IAME8 308–323 PHEMA_IAMIN 316–333 PHEMA_IANT6 322–339 PHEMA_IAPIL320–337 PHEMA_IAQU7 306–323 PHEMA_IARUD 320–337 PHEMA_IASE2 320–337PHEMA_IASH2 321–338 PHEMA_IASTA 315–332 PHEMA_IATKM 320–337 PHEMA_IAUDO322–339 380–397 PHEMA_IAV17 323–340 PHEMA_IAZCO 322–339 PHEMA_IAZH2306–323 PHEMA_IAZH3 306–323 PHBMA_IAZUK 322–339 PHEMA_MUMPM 101–118PHEMA_MUMPR 101–118 PHEMA_MUMPS 101–118 PHEMA_NOVA  93–110 PHEMA_NDVB 93–110 PHEMA_NDVD  93–110 PHEMA_NDVH  93–110 PHEMA_NDVI  93–110PHEMA_NDVM  93–110 PHEMA_NDVQ  93–110 PHEMA_NDVTG  93–110 PHEMA_NDVU 93–110 PHEMA_PHODV 36–63 PHEMA_PI1HW 486–503 PHEMA_PI38 111–128PHEMA_PI3H4 111–128 PHEMA_PI3HA 111–128 PHEMA_PI3HT 111–128 PHEMA_PI3HU111–128 PHEMA_PI3HV 111–128 PHEMA_PI3HW 111–128 PHSMA_PI3HX 111–128PHEMA_PI4HA 50–67 PHEMA_SV41  85–102 PHEMA_SV5  84–101 PHEMA_SV5CM 84–101 PHEMA_SV5CP  84–101 PHEMA_SV5LN  84–101 PVF05_VACCC 280–297PVF05_VACCP 280–297 PVF05_VACCV 281–298 PVF09_VACCC 176–193 PVT09_VACCV178–193 PVG27_HSVSA 209–226 PVG28_HSVI1 173–190 PVG39_HSVI1 648–665PVG43_HSVI1 109–126 521–636 PVG67_HSVI1 171–166 PVG72_HSVI1 1252–1269PVGF1_IBVB 3073–3090 PVGL2_IBVB 1094–1111 PVGLB_HSVE1 736–753PVGLB_HSVE4 676–692 PVGLB_HSVEA 736–753 PVGLB_HSVEB 736–753 PVGLB_HSVEL736–753 PVGLB_ILTV6 597–614 PVGLB_ILTV8 607–624 PVGLB_ILTVT 607–624PVGLC_PRVIF 180–197 PVGLE_VZVD 469–486 PVGLF_SV5 401–418 PVGLH_HCMVA365–382 PVGLH_HCMVT 364–381 PVGLH_HSV11 245–262 603–820 PVGLH_HSV1E246–262 603–820 PVGLI_HSV11 43–60 PVGLM_BUNL7 81–98 PVGLM_BUNBH 81–98PVGLM_PUUMH 712–729 PVGLM_PUUMS 712–729 PVGLM_RVFV 344–361 PVGLM_RVFVZ344–361 PVGLY_LASSQ 12–94 PVGLY_LASSJ 12–94 PVGLY_LYCVA 12–94PVGLY_LYCVW 12–94 PVGLY_MOPEI 12–94 PVM1_REOVD 280–297 PVM1_REOVL280–297 PVMAT_CDVO 148–166 PVMAT_MEABI  87–104 PVMP_CAMVC 147–164PVMP_CAMVD 147–164 PVMP_CAMVE 147–164 PVMP_CAMVN 147–164 PVMP_CAMVS147–164 PVMP_CAMVW 147–164 PVMSA_HPBV0 11–94 PVMSA_HPBV2 185–202PVMSA_HPBV4 185–202 PVMSA_HPBVA 174–191 PVMSA_HPBVD 11–94 PVMSA_HPBVJ174–191 PVMSA_HPBVL 174–191 PVMSA_HPBVN 11–94 PVMSA_HPBVO 174–191PVMSA_HPBVP 185–202 PVMSA_HPBVR 185–202 PVMSA_HPBVS 11–94 PVMSA_HPBVW174–191 PVMSA_HPBVY 174–191 PVMSA_HPBVZ 174–191 PVMT2_IAANN 25–42PVMT2_IABAN 25–42 PVMT2_IAFOW 25–42 PVMT2_IAFPR 25–42 PVMT2_IAFPW 25–42PVMT2_IALE1 25–42 PVMT2_IALE2 25–42 PVMT2_IAMAN 25–42 PVMT2_IAPUE 25–42PVMT2_IASIN 25–42 PVMT2_IAUDO 25–42 PVMT2_IAWIL 25–42

TABLE XI Search Results Summary for P3CTLZIP, P4CTLZIP, P5CTLZIP, andP6CTLZIP Motifs P3CTLZIP LIBRARY FILE PENV_BIV27 147–165 PENV_CAEVC810–828 PENV_CAEVG 808–828 PENV_HV2BE 750–768 PENV_HV2D1 741–759PENV_HV2G1 741–759 PENV_HV2NZ 742–760 PENV_HV2RO 751–769 PENV_HV2SB743–761 PENV_HV2ST 745–763 PENV_JSRV 376–394 PHEMA_PI2H 118–136PHEMA_PI2HT 118–136 PHEMA_6V41 55–73 PVENV_THOGV 473–491 PVG16_BPP22 83–101 PVG24_BPT4 115–133 PVG36_HBVSA 344–362 PVG40_HSVI1 14–32PVG50_HSVSA  5–94 PVG51_BPT4 63–81 PVG51_HSVI1  84–102 PVG66_HSVI1155–173 PVGF1_IBVB 2788–2806 3374–3392 PVGL2_CVH22 1053–1071 PVGL2_IBV61056–1074 PVGL2_IBVB 1055–1073 PVGL2_IBVD2 1056–1074 PVGL2_IBVK1055–1073 PVGL2_IBVM 1055–1073 PVGLB_HSVB1 560–578 689–707 PVGLB_HSV8C692–710 PVGLB_HSVSA 684–802 PVGLB_ILTV6 740–768 PVGLB_ILTV8 760–768PVGLB_ILTVT 760–788 PVGLC_VZVD 431–449 PVGLC_VZVS 431–449 PVGLF_PI3H4 2–94 PVGLH_HSV5G 314–332 PVGLH_HSVE4 814–832 PVGLH_HSVEB 807–825PVGLI_HSV11  5–94 PVGNM_BTMV 678–696 PVM01_VACCC 134–152 177–196PVM01_VACCV  83–101 126–144 PVM1_REOVD 227–245 PVM1_REOVL 227–245PVMAT_HRSVA 44–62 PVMAT_NDVA 190–208 PVMAT_NDVB 190–208 PVMP_CAMVC183–201 PVMP_CAMVD 183–201 PVMP_CAMVE 183–201 PVMP_CAMVN 183–201PVMP_CAMVS 183–201 PVMP_CAMVW 183–201 PVMP_FMVD 160–196 P4CTLZIP LIBRARYFILE PENV1_FRSFV 380–399 PENV_AVISU  98–117 PENV_BIV27 147–188PENV_IW1ZH 123–142 PENV_HV2D2  9–29 PENV_HV2SB 778–797 PENV_JSRV 541–580PENV_RSVP 533–552 PHEMA_VACCC 173–192 PHEMA_VACCI 173–192 PHEMA_VACCT173–192 PHEMA_VACCV 173–192 PVENV_BEV 62–81 PVENV_MCV1 61–80 PVENV_MCV261–80 PVFUS_ORFNZ 29–48 PVG01_HSVEB 169–188 PVG01_VACCC 376–395PVG01_VACCV 315–334 PVG01_VARV 376–396 PVG06_BPT4 627–646 PVG10_HSVI135–54 PVG11_HSVI1 103–122 150–169 PVG1_BPPH2 31–60 PVG1_BPV1R 659–678PVG20_BPT4 231–250 PVG32_VZVD  90–109 PVG38_BPK3 132–151 PVG37_BPT219–38 629–648 PVG37_BPT4 19–38 625–644 PVG39_H3VI1 1038–1057 PVG41_HSVI162–81 PVG43_BPPF3 380–399 PVG48_BPPF1 337–356 PVG69_HSVI1 142–151PVG61_HSVI1 117–135 PVG67_HSVI1 318–337 1072–1091 PVGF1_IBVB 1587–16062100–2127 PVGL2_CVBF  991–1010 PVGL2_CVBL9  991–1010 PVGL2_CVBLY 991–1010 PVGL2_CVBM  991–1010 PVGL2_CVBQ  991–1010 PVGL2_CVBV  991–1010PVGL2_CVH22 768–787 1115–1134 PVGL2_CVM4  999–1018 PVGL2_CVMA5 947–966PVGL2_CVMJH 858–877 PVGL2_CVPFS 64–83 1030–1057 PVGL2_CVPPU 64–831030–1055 PVGL2_CVPR8 814–833 PVGL2_CVPRM 814–833 PVGL2_FIPV 1041–1060PVGL2_IBV6 588–607 771–790 PVGL2_IBVB 587–606 770–789 PVGL2_IBVD2588–607 771–790 PVGL2_IBVK 587–606 770–789 PVGL2_IBVM 587–606 770–780PVGLB_HCMVA 706–725 PVGLB_HCMVT 707–726 PVGLB_HSV6U 117–136 PVGLB_ILTV6256–275 PVGLB_ILTVS 266–285 PVGLB_ILTVT 266–285 PVGLC_HSV11  3–94467–486 PVGLC_HSV1K  3–64 467–486 PVGLC_HSVBC 475–494 PVGLG_CHAV 436–455PVGLG_RABVH 372–391 PVGLI_HSVEB 44–63 PVGLI_VZVD 278–297 PVGLM_BUNGE117–136 PVGLM_PHV 152–171 PVGLM_PTPV  997–1016 PVGLM_PUUMH 155–174PVGLM_PUUMS 155–174 PVGLM_RVFV 830–849 PVGLM_RVFVZ 830–849 PVGLM_UUK655–674 PVGLY_LYCVW  89–108 PVGNS_CPMV 1186–1104 PVM3_REOVD 521–540PVME1_CVBM 171–190 PVME1_CVH22 138–155 PVME1_CVPFS 174–193 PVME1_CVPPU174–193 PVME1_CVPRM 174–193 PVME1_CVTKE 171–190 P5CTLZIP LIBRARY FILEPENV1_FRSFV 380–400 PENV2_FRSFV 380–400 PENV_BAEVM 170–190 PENV_FIVPE781–801 PENV_FIVSD 779–799 PENV_FIVT2 780–800 PENV_FLVGL  9–29PENV_FOAMV 255–275 924–944 PENV_FSVGA  9–29 PENV_HV1C4 428–448PENV_HV2CA 750–770 PENV_MLVF5 400–420 PENV_MMTVB 643–663 PENV_MMTVG643–663 PENV_OMVVS 76–95 PENV_RSVP 42–62 PENV_SFV1 924–944 PENV_SFV3L921–941 PENV_SIVM1 766–786 PENV_SIVMK 765–785 PENV_SIVML 764–784PENV_SIVS4 789–789 PENV_SIVSP 773–793 PHEMA_CDVO 493–513 PHEMA_CVBLY391–411 PHEMA_CVBM 391–411 PHEMA_CVBQ 391–411 PHEMA_CVHOC 391–411PHEMA_CVMA5 402–422 PHEMA_IACKG  81–101 PHEMA_IADMA  81–101 PHEMA_MUMPM397–417 PHEMA_MUMPR 397–417 PHEMA_MUMPS 397–417 PHEMA_PHODV 493–513PHEMA_PI1HW 322–342 PHEMA_PI2H 13–33 PHEMA_PI2HT 13–33 PHEMA_RINDL497–517 PHEMA_SEND5 322–342 PHEMA_SENDF 322–342 PHEMA_SENDH 322–342PHEMA_SENDJ 322–342 PHEMA_SENDZ 322–342 PVENV_LELV 27–47 148–188PVENV_THOGV 356–376 PVG01_VACCC 298–318 PVG01_VACCV 237–257 PVG01_VARV298–318 PVG06_VACCC 31–51 PVG06_VARV 31–51 PVG09_BPPF1 25–46 PVG12_HSVI1151–171 PVG22_HSVI1 300–320 PVG39_HSVI1 648–668 970–990 PVG51_HSVI129–49 PVG63_HSVI1 338–356 PVG65_HSVI1 117–137 PVG74_HSVSA 124–144PVGL2_IBV6 328–348 PVGL2_IBVB 327–347 PVGL2_IBVD2 328–346 PVGL2_IBVD3328–346 PVGL2_IBVK 327–347 PVGL2_IBVM 327–347 378–398 PVGL2_IBVU2310–330 PVGLB_EBV 732–752 PVGLB_HCMVA 750–770 PVGLB_HCMVT 751–771PVGLB_HSV23 79–99 PVGLB_HSV2H 79–99 PVGLB_HSV2S 66–86 PVGLB_HSV6U 72–92PVGLB_HSVB2 279–299 PVGLB_HSVSA 63–83 PVGLB_MCMVS 738–758 PVGLF_PI3H4283–303 PVGLG_RABVE 454–474 PVGLG_RABVH 454–474 PVGLG_RABVP 454–474PVGLG_RABVS 454–474 PVGLG_RABVT 454–474 PVGLH_MCMVS 670–690 PVGLM_BUNL71325–1345 PVGLM_BUNSH 1325–1345 PVGLM_BUNYW  996–1016 PVGLM_HANTB 999–1019 PVGLM_HANTH 1000–1020 PVGLM_HANTL 1001–1021 PVGLM_HANTV1001–1021 PVGLM_RVFVZ 1156–1176 PVGLM_SEOUR 1000–1020 PVGLM_SEOUS 999–1019 PVGLM_UUK 925–945 PVGLY_LYCVA 12–32 PVGLY_LYCVW 12–32PVGLY_PIARV 12–32 PVGNB_CPMV 141–161 PVMAT_MUMPS 310–330 PVMAT_NDVA309–329 PVMAT_NDVB 309–329 PVMAT_PI2HT 308–328 PVMAT_PI4HA 312–332PVMAT_PI4HB 312–332 PVMAT_SV41 308–328 PVMAT_SV5 308–328 PVME1_IBV674–94 PVME1_IBVB 74–94 PVME1_IBVB2 74–94 PVME1_IBVK 74–94 PVMSA_HPBDB201–221 PVMSA_HPBGS 209–229 PVMSA_HPBHE 293–313 PVMSA_WHV1 207–227PVMSA_WHV59 212–232 PVMSA_WHV7 212–232 PVM3A_WHV8 212–232 PVMSA_WHV81212–232 PVMSA_WHVW8 63–83 P6CTLZIP LIBRARY FILE PENV_BIV06 47–68 526–548PENV_BIV27 47–68 147–168 554–575 PENV_FENV1 226–246 830–861 PENV_FLVC6624–645 PENV_FLVGL 447–468 805–828 PENV_FLVLB 467–488 625–646 PENV_FLVSA444–465 802–623 PENV_FOAMV 153–174 957–978 PENV_FSVGA 467–488 625–648PENV_FSVGB 447–468 805–825 PENV_FSVSM 450–471 808–829 PENV_FSVST 467–488PENV_GALV 52–73 519–540 PENV_HV2BE 750–771 PENV_HV2G1 741–702 PENV_HV2NZ742–763 PENV_HV2RO 751–772 PENV_HV2ST 745–766 PENV_MCFF 600–621PENV_MCFF3 601–622 PENV_MLVAV 630–651 PENV_MLVCB 626–646 PENV_MLVF5639–660 PENV_MLVFF 639–660 PENV_MLVFP 639–660 PENV_MLVHO 628–647PENV_MLVKI 167–188 PENV_MLVMO 629–650 PENV_MLVRD 624–646 PENV_MLVRK624–646 PENV_MSVFB 170–191 PENV_RMCFV 803–824 PENV_SFV1 957–978PENV_SFV3L 157–178 954–975 PENV_SIVA1 437–458 PENV_SIVAG 442–463PENV_SIVAI 421–442 PENV_SIVAT 435–456 PENV_SMSAV 42–63 PHEMA_CVMA6402–423 PHEMA_IADE1 266–287 PHEMA_MUMPM 225–246 PHEMA_MUMPR 226–246PHEMA_MUMPS 226–246 PHEMA_PHODV 213–234 PHEMA_PI2H 13–34 PHEMA_PI2HT13–34 PHEMA_SV5  7–28 379–400 PHEMA_SV5CM  7–28 379–400 PHEMA_SV5CP 7–28 379–400 PHEMA_SV5LN  7–28 379–400 PVG01_HSVEB 169–190 PVG01_HSVI1589–610 PVG23_HSVI1 314–336 PVG37_BPOX2 65–86 PVG43_HSVI1 167–178PVG55_HSVI1 288–309 PVG55_HSVSA  85–106 PVG56_HSVI1 1155–1176PVG58_HSVSA 268–287 PVG60_HSVI1 30–51 PVG63_HSVI1 238–259 PVGF1_IBVB1858–1877 PVGH3_HCMVA 157–178 PVGL2_CVBF 1259–1280 PVGL2_CVBL9 1259–1280PVGL2_CVBLY 1259–1200 PVGL2_CVBM 1259–1280 PVGL2_CVBQ 1259–1280PVGL2_CVBV 1259–1280 PVGL2_CVM4 1317–1338 PVGL2_CVMA6 1265–1288PVGL2_CVMJH 1178–1197 PVGLB_HSV11  83–104 PVGLB_HSV1F  82–103PVGLB_HSV1K  82–103 PVGLB_HSV1P  83–104 PVGLB_MCMVS 135–168 PVGLC_PRVIF448–467 PVGLF_CDVO 336–357 PVGLF_MEASE 224–245 PVGLF_MEASI 227–248PVGLF_MEASY 224–245 PVGLF_MUMPM 446–467 PVGLF_MUMPR 446–467 PVGLF_MUMPS446–467 PVGLF_PHODV 305–326 PVGLF_PI1HC 456–477 PVGLF_PI2H 450–471PVGLF_PI2HG 450–471 FVGLF_PI2HT 450–471 PVGLF_PI3B 405–420 463–474PVGLF_PI3H4 453–474 PVGLF_RINDK 220–241 PVGLF_RINDL 220–241 PVGLF_SEND5460–481 PVGLF_SENDF 460–481 PVGLF_SENDH 460–481 PVGLF_SENDJ 460–481PVGLF_SENDZ 460–481 PVGLF_SV41 453–474 PVGLF_SV5 446–467 PVGLH_HCMVA691–712 PVGLH_HCMVT 690–711 PVGLH_HSVE4 304–326 PVGLH_HSVEB 297–318PVGLH_HSVSA 658–679 PVGLI_HSV2  2–23 PVGLI_HSV23  2–23 PVGLM_BUNGE197–218 PVGLM_BUNL7 190–211 PVGLM_BUNSH 190–211 PVGLM_BUNYW 193–214PVGLY_LASSG 237–258 PVGLY_LASSJ 238–259 PVGP8_EBV 67–88 PVM01_VACCC281–302 PVM01_VACCV 230–251 PVMAT_HRSVA 169–180 PVMAT_RINDK 200–221239–260 PVMAT_TRTV 122–143 PVME1_CVHOC 64–85 PVMSA_HPBDB 201–222PVMSA_HPBV0 70–91 PVMSA_HPBV2 244–265 PVMSA_HPBV4 244–265 PVMSA_HPBV9244–265 PVMSA_HPBVA 233–254 PVMSA_HPBVD 70–91 PVMSA_HPBVI 233–254PVMSA_HPBVJ 233–254 PVMSA_HPBVL 233–254 PVMSA_HPBVN 70–91 PVMSA_HPBVO233–264 PVMSA_HPBVP 244–265 PVMSA_HPBVR 244–265 PVMSA_HPBVS 70–91PVMSA_HPBVW 233–254 PVMSA_HPBVY 233–254 PVMSA_HPBVZ 233–254 PVMT2_IAANN25–46 PVMT2_IABAN 25–46 PVMT2_IAFOW 25–46 PVMT2_IAFPR 25–46 PVMT2_IAFPW25–46 PVMT2_IALE1 25–46 PVMT2_IALE2 25–46 PVMT2_IAMAN 25–46 PVMT2_IAPUE25–46 PVMT2_IASIN 25–46 PVMT2_IAUDO 25–46 PVMT2_IAWIL 25–46

TABLE XII Search Results Summary for P7CTLZIP, P8CTLZIP, and P9CTLZIPMotifs P7CTLZIP P8CTLZIP P9CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILEPENV_BAEVM 202–224 PENV1_FR9FV 380–403 PENV_BLVAF 303–327 PENV_HV1B1498–520 PENV2_FRSFV 300–403 PENV_BLVAU 303–327 PENV_HV1B8 493–516PENV_BIV08 178–201 PENV_BLVAV 303–327 PENV_HV18N 494–518 PENV_BIV27207–230 PENV_BLVB2 303–327 PENV_HV1BR 503–526 PENV_FOAMV 804–887PENV_BLVB5 303–327 PENV_HV1EL 495–517 PENV_HV123 175–198 PENV_BLVJ303–327 PENV_HV1H2 498–520 PENV_HV2BE  3–28 781–804 PENV_FIVPE 781–805PENV_HV1H3 498–520 PENV_HV2CA 750–773 PENV_FIVSD 779–803 PENV_HV1J3510–632 PENV_HV2D1  3–28 772–706 PENV_FIVT2 780–801 PENV_HV1JR 480–512PENV_HV2D1 772–785 PHEMA_CVBLY 391–415 PENV_HV1KB 604–628 PENV_HV2NZ777–800 PHEMA_CVBM 391–416 PENV_HV1MA 600–622 PENV_JSRV 541–664PHEMA_CVBQ 391–415 PENV_HV1MF 489–618 PENV_9FV1 884–887 PHEMA_CVHOC391–415 PENV_HV1ND 489–610 PENV_6FV3L 881–884 PHEMA_INCCA 442–488PENV_HV1PV 488–620 PENV_9IVM1 803–820 PHEMA_INCEN 430–454 PENV_HV1S1189–511 PENV_6IVMK 802–025 PHEMA_INCOL 430–454 PENV_HV1Z2 123–146495–517 PENV_8IVML 801–824 PHEMA_INCHY 429–463 PENV_HV1Z6 497–618PENV_8IVS4 808–829 PHEMA_INCJH 443–467 PENV_HV1Z8 606–627 PENV_8IVSP810–833 PHEMA_INCKY 429–453 PENV_HV1ZH 498–620 PHEMA_COVO 200–223PHEMA_INCMI 429–463 PENV_JSRV 379–398 PHEMA_PI2H 85–88 PHEMA_INCNA428–463 PENV_MPMV 213–236 PHEMA_PI2HT 85–88 PHEMA_INCP1 430–454PENV_8RV1 213–235 PVF11_VACCC 181–184 PHEMA_INCP2 430–454 PHEMA_IAAIC37–69 PVF16_VACCC 25–48 PHEMA_INCP3 430–464 PHEMA_IABAN 21–43PVF16_VACCP  3–26 PHEMA_INCTA 430–464 PHEMA_IADA3 37–68 PVG1L_AMEPV313–336 PHEMA_INCYA 430–454 PHEMA_IADH2 21–43 RVG2B_HSVI1 491–514PHEMA_MUMPM 101–125 PHEMA_IADH3 21–43 PVG43_H6VI1 322–346 PHEMA_MUMPR101–125 PHEMA_IADH4 21–43 PVG52_HSVI1 229–252 PHEMA_MUMPS 101–125PHEMA_IADH5 21–43 PVG87_HSVI1 722–746 PHEMA_PI1HW 29–53 PHEMA_IADH621–43 PVGL2_CVBF 10–33 PVENV_BEV 82–88 PHEMA_IADH7 21–43 PVGL2_CVBL9661–674 PVFO5_VACCC 280–304 PHEMA_IADM2 37–69 PVGL2_CVBLY 10–33PVFO6_VACCP 280–304 PHEMA_IADNA 28–60 PVGL2_CVM4 1267–1290 PVFO6_VACCV281–305 PHEMA_IADU3 37–68 PVGL2_CYMA6 1216–1238 PVFO9_VACCC 170–200PHEMA_IAEN6 21–43 PVGL2_CVMJH 1126–1149 PVFO5_VACCV 176–200 PHEMA_IAEN737–69 PVGL2_CVPF8 1274–1297 PVGO1_VZVD 68–82 PHEMA_IAMAO 37–69PYGL2_CVPPU 1272–1295 PVG10_HSVSA 355–379 PHEMA_IAME1 37–69 PVGL2_CVPR81050–1073 PVG12_HSVSA 88–92 PHEMA_IAME2 37–69 PVGL2_CVPRM 1050–1073PVG19_HSVI1  88–112 PHEMA_IAME6 21–43 PVGL2_FIPV 1277–1300 PVG28_HSVI1173–197 PHEMA_IANT6 37–69 PVGL2_IBV8 180–219 PVG43_HSVI1 109–133PHEMA_IAQU7 21–43 PVGL2_IBVB 195–218 PVG87_HSVI1 108–132 1005–1029PHEMA_IATXM 33–65 PVGL2_IBVD2 196–219 PVG72_HSVI1 720–744 PHEMA_IAUDO37–69 PVGL2_IBVD3 196–219 PVGF1_IBVB 3801–3825 PHEMA_IAVI7 38–80PVGL2_IBVK 195–218 PVGLB_HSVMD 589–613 PHEMA_IAX31 37–59 PVGL2_IBVM195–218 PVGLB_ILTV6 597–621 PHEMA_IAZCO 37–59 PVGL2_IBVU1 178–201PVGLB_ILTV9 607–631 PHEMA_IAZH2 21–43 PVGL2_IBVU2 178–201 PVGLB_ILTVT607–631 PHEMA_IAZH3 21–43 PVGL2_IBVU3 178–201 PVGLE_HSV11 413–437PHEMA_IAZUK 37–59 PVGLB_HCMVA 535–558 PVGLE_VZVD 469–493 PHEMA_PHODV38–58 PVGLB_HCMVT 530–559 PVGLF_SV6 401–425 PHEMA_PI2H 68–87 PVGLB_HSVSA483–608 PVGLH_HCMVA 574–598 PHEMA_PI2HT 68–87 PVGLB_MCMVB 600–689PVGLH_HCMVT 573–597 PVFP7_CAPVK  89–111 PVGLC_HSV11 467–490 PVGLH_HSV11443–467 803–827 PVFUS_VACC8 72–94 PVGLC_HSV1K 467–490 PVGLH_HSV1E443–467 803–827 PVGO1_HSVI1 317–339 PVGLC_HSV2 435–458 PVGLM_BUNL7 31–55PVGO3_VACCC 60–72 PVGLC_HSV23 436–469 PVGLM_BUNSH 31–55 PVGO3_VARV 60–72PVGLM_BUNL7 1387–1410 PVGLM_HANTH 694–718 PVGO4_VACCC 11–33 PVGLM_BUNSH1387–1410 PVGLM_RVFV 344–368 PVGO4_VARV 11–33 PVGLM_UUK 966–989PVGLM_RVFVZ 344–368 PVG19_HSVI1  88–110 PVGLY_JUNIN 12–35 PVGLM_UUK581–595 PVG28_HSVI1 173–195 PVGLY_LASSO 12–35 PVGNM_CPMV 311–335PVG29_HSVI1 20–42 PVGLY_LASSJ 12–35 PVGP2_EBV 867–881 PVG46_HSVI1134–156 PVGLY_LYCVA 12–35 PVGP3_EBV 854–878 PVG48_HSV8A 71–93PVGLY_LYCVW 12–35 PVM1_REOVD 280–304 PVG58_HSV8A 286–288 PVGLY_MOPEI12–35 PVM1_REOVL 280–304 PVG69_HSVI1 267–289 PVGLY_TACV 12–35PVM21_REOVD 108–192 PVG5_8PV4 42–64 PVGLY_TACV5 12–35 PVM22_REOVD188–192 PVG60_HSVI1 63–75 PVGLY_TACV7 12–35 PVM2_REOVJ 188–192PVG65_HSVI1 1347–1369 PVGLY_TACVT 12–35 PVM2_REOVL 188–192 PVG8_8PV1R60–82 PVGNM_CPMV 741–784 PVMAT_MEA9I  87–111 PVGL2_IBV6 1056–1078PVM1_REOVD 324–347 454–477 PVMAT_8SPVB 314–338 PVGL2_IBVB 1055–1077PVM1_REOVL 464–477 PVME1_CV8M 137–161 PVGL2_IBVD2 1056–1078 PVMAT_MUMPS227–260 PVME1_CVHOC 137–161 PVGL2_IBVX 1055–1077 PVMSA_HPBDB 289–292PVME1_CVTKE 137–161 PVGL2_IBVM 1055–1077 PVMSA_HPBDC 268–291 PVME1_IBV874–98 PVGLB_HSV6U 117–139 PVMSA_HPBDU 231–264 PVME1_IBVB 74–98PVOLB_H8VB2 745–767 PVMBA_HPBDW 289–292 PVME1_IBVB2 74–98 PVGLC_HSVMB399–421 PVMSA_HPBHE 236–259 PVME1_IBVK 74–98 PVGLC_HBVMG 398–420PVMSA_HPBGS 271–295 PVGLC_HSVMM 399–421 PVMSA_WHV1 200–293 PVGLF_BRSVA265–287 482–504 PVMSA_WHV59 274–298 PVGLF_BRSVC 484–506 PVM3A.WHV7274–298 PVGLF_BRSVR 484–506 PVMSA_WHV8 274–298 PVGLF_HRSV1 484–506PVM3A_WHV8I 274–268 PVGLF_HRSVA 484–506 PVMSA_WHVW6 126–149 PVGLF_HRSV1484–506 PVGLF_HRSVA 484–506 PVGLF_HRSVL 452–474 PVGLG_IHNV 77–99PVGLG_VHSVO 408–428 PVGLH_HSVE4 814–836 PVGLH_HSVEB 807–829 PVGLI_HCMVA168–180 PVGLM_PTPV 743–768 PVGLP_BEV 430–462 1646–1668 PVGLY_LASSG420–449 PVGLY_LASSJ 427–449 PVGLY_MOPEI 428–447 PVGP2_EBV 657–679PVGP3_EBV 854–876 PVM1_REOVD 414–436 PVM1_REOVL 414–436 PVM3_REOVD304–326 PVMAT_PI1HC 195–217 PVMAT_PI2HT 132–164 PVMAT_SENDF 195–217PVMAT_SENDH 195–217 PVMAT_SENDZ 195–217 PVMAT_8V41 132–164 PVMEM_EBV131–163 PVMP_CERV 293–315

TABLE XIII SEARCH RESULTS SUMMARY FOR P12LZIPC MOTIF All Viruses PCGENEP12CTLZIP (No Bacteriophages) AREA AREA AREA AREA AREA AREA AREA AREAAREA FILE NAME PROTEIN VIRUS 1 2 3 4 5 6 7 8 9 P194K_TRVSY POTENTIAL 194KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN 360– 463– 600–  641– 1011– 1299–1385– SYM) 378 478 619 668 1030 1325 1409 P3BHS_VACCC 3BETA-HSD VACCINIAVIRUS (STRAIN  41– 297– COPENHAGEN) 56 321 P3BHS_VACCV 3BETA-HSDVACCINIA VIRUS (STRAIN WR)  41– 297– 56 321 P3BHS_VARV 3BETA_HSD VARIOLAVIRUS  41– 56 PAT3H_FOWPM ANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS(ISOLATE HP-418  47– MUNICH) 69 PAT11_VACCV 94 KD A-TYPE INCLUSIONVACCINIA VIRUS (STRAIN WR) 387– PROTEIN 410 PAT11_VARV 81 KD A-TYPEINCLUSION VARIOLA VIRUS 388– PROTEIN 411 PAT12_HSV11 UL46 HERPES SIMPLEXVIRUS (TYPE 1/ 279– STRAIN 17) 305 PAT12_HSV1F UL46 HERPES SIMPLEX VIRUS(TYPE 1/ 279– STRAIN F) 305 PAT12_HSVEU ALPHA TRANS-INDUCING EQUINEHERPES VIRUS TYPE 1 197– FACTOR 82 KD PROTEIN (STRAIN AB4P) 222PAT12_VACCC PUTATIVE A-TYPE VACCINIA VIRUS (STRAIN 215– INCLUSIONPROTEIN COPENHAGEN) 241 PAT12_VZVD ALPHA TRANS-INDUCING VARICELLA-ZOSTERVIRUS (STRAIN  61– 377– FACTOR 74 KD PROTEIN DUMAS) 79 397 PAT13_VACCVPUTATIVE A-TYPE VACCINIA VIRUS (STRAIN WR)  47– INCLUSION PROTEIN 73PATIN_HSVBP ALPHA TRANS-INDUCING BOVIVE HERPES VIRUS TYPE 1 101– 277–PROTEIN (STRAIN P8-2) 120 292 PATIN_HSVE4 ALPHA TRANS-INDUCING EQUINEHERPES VIRUS TYPE 4 104– PROTEIN 123 PATIN_HSVEB ALPHA TRANS-INDUCINGEQUINE HERPES VIRUS TYPE 1 129– PROTEIN (STRAIN AB4P) 148 PATIN_VZVDALPHA TRANS-INDUCING VARICELLA-ZOSTER VIRUS (STRAIN 203– PROTEIN DUMAS)230 PATI_COWPX A TYPE INCLUSION PROTEIN COWPOX VIRUS 389– 1102–  4121128 PB2_BBV B2 PROTEIN BLACK BEETLE VIRUS  31– 52 PB701_HSV60TRANSCRIPTIONAL HERPES SIMPLEX VIRUS (TYPE 6/  55– REGULATORY PROTEINSTRAIN G5) 78 PBCRF_EBV BCRF1 PROTEIN PRECURSOR EPSTEIN-BARR VIRUS(STRAIN  96– B95-8) 123 PBRLI_EBV TRANSCRIPTION ACTIVATOR EPSTEIN-BARRVIRUS (STRAIN  16– 200– BRLF1 B95-8) 32 224 PCAHH_VACCC CELLSURFACE-BINDING VACCINIA VIRUS (STRAIN 188– PROTEIN COPENHAGEN) 203PCAHH_VACCV CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN WR) 188– PROTEIN203 PCAHH_VARV CELL SURFACE-BINDING VARIOLA VIRUS 188– PROTEIN 203PCCPH_HSVSA COMPL CONTROL PROTEIN HERPES VIRUS SAIMIRI (STRAIN 326–HOMOLOG PREC 11) 348 PCELF_HSV1I CELL FUSION PROTEIN HERPES SIMPLEXVIRUS (TYPE 178– 212– 286– PRECURSOR 1/STRAIN 17) 196 238 309PCELF_HSV1K CELL FUSION PROTEIN HERPES SIMPLEX VIRUS (TYPE 178– 212–PRECURSOR 1/STRAIN KOS) 196 238 PCELF_HSV2H CELL FUSION PROTEIN HERPESSIMPLEX VIRUS (TYPE 178– 212– 285– PRECURSOR 2/STRAIN HG52) 196 238 309PCELF_HSVEB CELL FUSION PROTEIN HERPES VIRUS TYPE 1 (STRAIN 205– 249–PRECURSOR KENTUCKY A) 223 268 PCELF_VZVD CELL FUSION PROTEINVARICELLA-ZOSTER VIRUS (STRAIN 246– PRECURSOR DUMAS) 269 PCGH2_HSVSACYCLIN HOMOLOG HERPES VIRUS SAIMIRI (STRAIN  35– 216– 11) 61 242PCOAI_BFDV COAT PROTEIN VP1 BUDGERIGAR FLEDGLING DISEASE  93– VIRUS 110PCOAI_POVBA COAT PROTEIN VP1 POLYOMA VIRUS BK (STRAIN AS)  25–  97– 233–52 123 251 PCOAI_POVBK COAT PROTEIN VP1 POLYOMA VIRUS BK  25–  97– 233–52 123 251 PCOAI_POVBO COAT PROTEIN VP1 BOVINE POLYOMA VIRUS  96– 120PCDA2_POVLY COAT PROTEIN VP1 HAMSTER POLYOMA VIRUS  16– 43 PCOAT_POVICCOAT PROTEIN VP1 POLYOMA VIRUS JC  17–  89– 225– 44 115 253 PCOAI_POVLYCOAT PROTEIN VP1 LYMPHOTROPIC POLYOMA VIRUS  97– 123 PCOAI_POVMK COATPROTEIN VP1 MOUSE POLYOMA VIRUS (STRAIN 142– 231– KILHAM) 160 249PCOAI_SV40 COAT PROTEIN VP1 SIMIAN VIRUS 40  27–  99– 235– 44 125 253PCOAI_TTVI COAT PROTEIN VP1 THERMOPROTEUS TENAX VIRUS 1  80– (STRAINKRAI) 103 PCOA2_POVBO COAT PROTEIN VP2 BOVINE POLYOMA VIRUS  77– 104PCOA2_POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMA VIRUS  79– 102PCOA2_POVM3 COAT PROTEIN VP2 MOUSE POLYOMA VIRUS (STRAIN 3) 205– 226PCOA3_TTVI COAT PROTEIN TP3 THERMOPROTEUS TENAX VIRUS 1  33– (STRAINKRAI) 55 PCOAT_ABMVW COAT PROTEIN ABUTILON MOSAIC VIRUS (ISOLATE 148–WEST INDIA) 171 PCOAT_BOOLV COAT PROTEIN PRECURSOR BOOLARRA VIRUS 383–401 PCOAT_CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA 364–392– VIRUS 1 387 409 PCOAT_CLVK COAT PROTEIN CASSAVA LATENT VIRUS(STRAIN 165– WEST KENYAN 844) 168 PCOAT_CLVN COAT PROTEIN CASSAVA LATENTVIRUS (STRAIN 165– NIGERIAN) 168 PCOAT_CMVSI COAT PROTEIN CYMBIDIUMMOSAIC VIRUS (STRAIN  58– SINGAPORE) 76 PCOAT_CNV COAT PROTEIN CUCUMBERNECROSIS VIRUS  19– 42 PCOAT_CSMV COAT PROTEIN CHLORIS STRUTS MOSAICVIRUS 219– 238 PCOAT_CTV36 COAT PROTEIN CITRUS TRISTEZA VIRUS (ISOLATE 72– T36) 94 PCOAT_FCVC6 COAT PROTEIN FELINE CALICIVIRUS (STRAIN 564–642– CFI/68 FIV) 587 664 PCOAT_FCVF4 COAT PROTEIN FELINE CALICIVIRUS(STRAIN 564– 642– JAPANESE F4) 587 657 PCOAT_FCVF9 COAT PROTEIN FELINECALICIVIRUS (STRAIN F9) 567– 645– 590 660 PCOAT_FPV COAT PROTEIN VP1FELINE PANLEUKOPENIA VIRUS 690– 705 PCOAT_FPV19 COAT PROTEIN VP1 FELINEPANLEUKOPENIA VIRUS 690– (STRAIN 193) 705 PCOAT_HEVS COAT PROTEINHELENIUM VIRUS 5  47– 66 PCOAT_MEVA COAT PROTEIN VP1 MINK ENTERITISVIRUS (STRAIN 685– ABASHIRI) 700 PCOAT_MNSV COAT PROTEIN MELON NECROTICSPOT VIRUS  37– 53 PCOAT_MSTV COAT PROTEIN MAIZE STRIPE VIRUS) 176– 204–197 227 PCOAT_NMV COAT PROTEIN NARCISSUS MOSAIC VIRUS  67– 86PCOAT_NODAV COAT PROTEIN PRECURSOR NODAMURA VIRUS 379– 394 PCOAT_ORSVCOAT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 104– 130 PCOAT_OYMV COATPROTEIN ONONIS YELLOW MOSAIC VIRUS  35– 52 PCOAT_PAVC2 COAT PROTEIN VP2CANINE PARVOVIRUS (TYPE 2/ 547– STRAIN A72) 562 PCOAT_PAVC7 COAT PROTEINVP1 CANINE PARVOVIRUS (STRAIN 685– 780929) 700 PCOAT_PAVCD COAT PROTEINVP1 CANINE PARVOVIRUS (STRAIN 700– CPV-D CORNELL 320) 715 PCOAT_PAVCNCOAT PROTEIN VP1 CANINE PARVOVIRUS (STRAIN N) 711– 726 PCOAT_PEMV COATPROTEIN PRECURSOR PEPPER MOTTLE VIRUS 273– 295 PCOAT_PMV COAT PROTEINPAPAYA MOSAIC POTEXVIRUS  85– 103 PCOAT_PPMVS COAT PROTEIN PEPPER MILDMOTTLE VIRUS  64– 103– (STRAIN SPAIN) 84 129 PCOAT_PVSP COAT PROTEINPOTATO VIRUS S (STRAIN 129– PERUVIAN) 147 PCOAT_RSV COAT PROTEIN RICESTRIPE VIRUS 128– 152 PCOAT_SMWLM COAT PROTEIN SATELLITE MAIZE WHITELINE  51– MOSAIC VIRUS 67 PCOAT_SMYEA COAT PROTEIN STRAWBERRY MILDYELLOW EDGE-  57– ASSOCIATED VIRUS 72 PCOAT_TAMV GENOME POLYPROTEINTAMARILLO MOSAIC VIRUS 222– 237 PCOAT_TBSVB COAT PROTEIN TOMATO BUSHYSTUNT VIRUS 359– (STRAIN BS-3) 383 PCOAT_TCV COAT PROTEIN TURNIP CRINKLEVIRUS  73– 89 PCOAT_TGMV COAT PROTEIN TOMATO GOLDEN MOSAIC VIRUS 154–177 PCOAT_TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC 102– VIRUS (TMVSTRAIN U2) 128 PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC VIRUS (VULGARE)102– 128 PCOAT_TMV06 COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN 102– 06)128 PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN 102–DAHLEMENSE) 128 PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN102– ER) 128 PCOAT_TMVHR COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN 102–HOLMES RIDGRASS (HR)) 128 PCOAT_TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS(STRAIN O) 102– 128 PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS(STRAIN 102– OM) 128 PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS(STRAIN 102– TOMATO/L) 128 PCOAT_TNVA COAT PROTEIN TOBACCO NECROSISVIRUS (STRAIN 119– A) 142 PCOAT_TNVD COAT PROTEIN TOBACCO NECROSIS VIRUS(STRAIN 108– D) 134 PCOLL_HSVSC COLLAGEN-LIKE PROTEIN HERPES VIRUSSAIMIRI (SUBGROUP  71– C/STRAIN 488) 96 PCORA_HPBV2 CORE ANTIGENHEPATITIS B VIRUS (SUBTYPE  79– ADW2) 100 PCORA_HPBVA CORE ANTIGENHEPATITIS B VIRUS (STRAIN  15– ALPHA1) 31 PCORA_HPBVZ CORE ANTIGENHEPATITIS B VTRUS (SUBTYPE  79– ADYW) 100 PDNBI_ADE02 PROBABLEDNA-BINDING HUMAN ADENOVIRUS TYPE 2  71– PROTEIN 93 PDNBI_EBV MAJORDNA-BINDING EPSTEIN-BARR VIRUS (STRAIN 649– PROTEIN B95-8) 673PDNBI_HCMVA MAJOR DNA-BINDING HUMAN CYTOMEGALOVIRUS (STRAIN 681– PROTEINAD169) 708 PDNBI_HSVII MAJOR DNA-BINDING HERPES SIMPLEX VIRUS (TYPE 459–597– PROTEIN 1/STRAIN 17) 476 620 PDNBI_HSVIF MAJOR DNA-BINDING HERPESSIMPLEX VIRUS (TYPE 459– 597– PROTEIN 1/STRAIN F) 476 620 PDNBI_HSVIKMAJOR DNA-BINDING HERPES SIMPLEX VIRUS (TYPE 459– 597– PROTEIN 1/STRAINKOS) 476 620 PDNBI_HSVB2 MAJOR DNA-BINDING BOVINE HERPES VIRUS TYPE 2455– 596– PROTEIN (STRAIN DMV) 472 616 PDNBI_HSVEB MAJOR DNA-BINDINGEQUINE HERPES VIRUS TYPE 1 810– PROTEIN (STRAIN AD4P) 831 PDNBI_HSVSAMAJOR DNA-BINDING HERPES VIRUS SAIMIRI (STRAIN 108– 610– 869–  974–PROTEIN 11) 127 629 887 1000 PDNBI_MCMVS MAJOR DNA-BINDING MURINECYTOMEGALOVIRUS (STRAIN 657– PROTEIN SMITH) 684 PDNBI_SCMVC MAJORDNA-BINDING SIMIAN CYTOMEGALOVIRUS (STRAIN 188– 643– PROTEIN COLBURN)212 670 PDNLI_VARV DNA LIGASE VARIOLA VIRUS 269– 294 PDPOL_ADE02 DNAPOLYMERASE HUMAN ADENOVIRUS TYPE 2 264– 828– 283 850 PDPOL_ADE05 DNAPOLYMERASE HUMAN ADENOVIRUS TYPE 5 264– 828– 283 850 PDPOL_ADE07 DNAPOLYMERASE HUMAN ADENOVIRUS TYPE 7 331– 494– 894– 350 517 916PDPOL_ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12 262– 562– 826– 281583 848 PDPOL_CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS 430– 654– 732–ENTOMOPOXVIRUS 454 678 757 PDPOL_CHVN2 DNA POLYMERASE CHLORELLA VIRUSNY-2A 424– 442 PDPOL_CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA CHLORELLA153– 424– VIRUS 1 172 442 PDPOL_EBV DNA POLYMERASE EPSTEIN-BARR VIRUS(STRAIN 354– 438– 524–  667–  973– B95-8) 374 463 542 687 990PDPOL_FOWPV DNA POLYMERASE FOWLPOX VIRUS  60– 220– 77 247 PDPOL_HCMVADNA POLYMERASE HUMAN CYTOMEGALOVIRUS (STRAIN 569– 945– 1029–  AD169) 587960 1053 PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS (BROWN  4–157– 522–  554– SHANGHAI DUCK ISOLATE S5) 29 174 541 572 PDPOL_HPBDC DNAPOLYMERASE DUCK HEPATITIS B VIRUS (STRAIN  4– 157– 521–  553– CHINA) 29174 540 571 PDPOL_HPBDU DNA POLYMERASE DUCK HEPATITIS B VIRUS 181– 213–200 231 PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS (WHITE  4–157– 522–  554– SHANGHAI DUCK ISOLATE S31) 29 174 541 572 PDPOL_HPBGSDNA POLYMERASE GROUND SQUIRREL HEPATITIS 448– VIRUS 475 PDPOL_HPBHE DNAPOLYMERASE HERON HEPATITIS B VIRUS  4– 554– 29 572 PDPOL_HPBV2 DNAPOLYMERASE HEPATITIS B VIRUS (SUBTYPE 412– 447– 763– ADW2) 439 463 780PDPOL_HPBV4 DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 410– ADR4) 417PDPOL_HPBV9 DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 412– 447– 763–ADW/STRAIN 991) 439 463 780 PDPOL_HPBVA DNA POLYMERASE HEPATITIS B VIRUS(STRAIN  80– 399– 434–  750– ALPHA 1) 96 426 450 767 PDPOL_HPBV1 DNAPOLYMERASE HEPATITIS B VIRUS (SUBTYPE  80– 410– 445–  761– ADW/STRAININDONESIA/PIDW420) 96 437 468 778 PDPOL_HPBVJ DNA POLYMERASE HEPATITIS BVIRUS (SUBTYPE  80– 410– 445–  761– ADW/STRAIN JAPAN/PJDW233) 96 437 468778 PDPOL_HPBVL DNA POLYMERASE HEPATITIS B VIRUS (STRAIN  80– 399– 434– 750– LSH/CHIMPANZEE ISOLATE) 96 426 457 767 PDPOL HPBVM DNA POLYMERASEHEPATITIS B VIRUS (SUBTYPE  80– 410– 760– ADR/MUTANT) 96 437 777PDPOL_HPBVO DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE  80– 410– 445– 761– ADW/STRAIN OKINAWA/PODW282) 96 437 468 778 PDPOL_HPBVP DNAPOLYMERASE HEPATITIS B VIRUS (SUBTYPE 412– 447– ADW/STRAINPHILIPPINO/PFDW294) 439 463 PDPOL_HPBVR DNA POLYMERASE HEPATTTIS B VIRUS(SUBTYPE ADR)  80– 410– 761– 96 437 771 PDPOL_KPBVW DNA POLYMERASEHEPATITIS B VTRUS (SUBTYPE ADW)  82– 405– 440– 98 432 456 PDPOL_HPBVYDNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW)  80– 309– 434–  750– 96426 457 767 PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE  80–399– 434– ADYW) 96 426 457 PDPOL_HSVI1 DNA POLYMERASE HERPES SIMPLEXVIRUS (TYPE 797– 877– 1073–  1/STRAIN 17) 817 897 1090 PDPOL_HSVIA DNAPOLYMERASE HERPES SIMPLEX VIRUS (TYPE 797– 877– 1073–  1/STRAINANGELOTTI) 817 897 1090 PDPOL_HSVIK DNA POLYMERASE HERPES SIMPLEX VIRUS(TYPE 797– 877– 1073–  1/STRAIN KOS) 817 897 1090 PDPOL_HSVIS DNAPOLYMERASE HERPES SIMPLEX VIRUS (TYPE 797– 877– 1073–  1/STRAIN SC16)817 897 1090 PDPOL_HSV2I DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 802–882– 1078–  2/STRAIN 186) 822 902 1095 PDPOL_HSV6U DNA POLYMERASE HERPESSIMPLEX VIRUS (TYPE 652– 786– 858– 6/STRAIN UGANDA-1102) 672 803 882PDPOL_HSVEB DNA POLYMERASE EQUINE HERPES VIRUS TYPE 1 283– 377– 454– 798–  878– (STRAIN AB4P) 299 392 477 818 898 PDPOL_HSV11 DNA POLYMERASEICTALURID HERPES VIRUS 1 257– 397– 275 418 PDPOL_HSVSA DNA POLYMERASEHERPESVIRUS SAIMIRI (STRAIN 11) 118– 297– 344–  514–  955– 137 319 364532 972 PDPOL_MCMVS DNA POLYMERASE MURINE CYTOMEGALOVIRUS (STRAIN 303–535– 780– SMITH) 322 553 802 PDPOL_NPVAC DNA POLYMERASE AUTOGRAPHACALIFORNICA NUCLEAR 518– 676– POLYHEDROSIS VIRUS 536 697 PDPOL_VARV DNAPOLYMERASE VARIOLA VIRUS 421– 437 PDPOL_VZVD DNA POLYMERASEVARICELLA-ZOSTER VIRUS (STRAIN 312– 363– 440–  713–  757– 1006– DUMAS)331 312 463 740 781 1024 PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITISVIRUS 1 446– 473 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59451– 478 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 451– 478PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 450– 554– 477 571PDPOL_WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 451– 478PDPOL_WHVW6 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS W64 123– (ISOLATEPWS23) 150 PDPOM_HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW)399– 434– 750– 426 450 767 PDUT_HCMVA DUTPASE HUMAN CYTOMEGALO VIRUS(STRAIN 107– AD169) 126 PDUT_HSVE4 DUTPASE EQUINE HERPESVIRUS TYPE 4130– (STRAIN 1942) 154 PDUT_HSVEB DUTPASE EQUINE HERPESVIRUS TYPE 1 130–(STRAIN AB4P) 149 PDUT_HSVI1 DUTPASE ICTALURID HERPESVIRUS 1  72– 95PDUT_HSVSA DUTPASE HERPESVIRUS SAIMIRI (STRAIN 11)  22–  79– 168– 45 104183 PE1I1_ADEM1 EARLY E1A 11 KD PROTEIN MOUSE ADENOVIRUS TYPE 1  24– 47PEIA6_ADE07 EARLY E1A 63 KD PROTEIN HUMAN ADENOVIRUS TYPE 7  8– 35PE1A_ADE04 EARLY E1A 28 KD PROTEIN HUMAN ADENOVIRUS TYPE 4 104– 120PE1A_ADE07 EARLY E1A 28 KD PROTEIN HUMAN ADENOVIRUS TYPE 7  8– 35PE1A_ADES7 EARLY E1A 28 KD PROTEIN SIMIAN ADENOVIRUS TYPE 7 173– 238–189 254 PE1BL_ADE12 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 12 451–T-ANTIGEN 467 PE1BL_ADEC2 E1B PROTEIN, LARGE CANINE ADENOVIRUS TYPE 2101– T-ANTIGEN 122 PE1BL_ADENT EARLY E1B 44 KD PROTEIN TUPA1A ADENOVIRUS 75– 101 PE1BS_ADEC1 E1B PROTEIN, SMALL CANINE ADENOVIRUS TYPE 2  55–T-ANTIGEN 77 PE1BS_ADEM1 E1B PROTEIN, SMALL MOUSE ADENOVIRUS TYPE 1 118–T-ANTIGEN 138 PE310_ADE02 EARLY E3B 10 4 KD HUMAN ADENOVIRUS TYPE 2  3– 34– PROTEIN PRECURSOR 21 60 PE310_ADE05 EARLY E3B 10 4 KD HUMANADENOVIRUS TYPE 5  3–  33– PROTEIN PRECURSOR 21 60 PE310_ADE07 EARLY E3B10 4 KD HUMAN ADENOVIRUS TYPE 7  3– PROTEIN PRECURSOR 24 PE311_ADE02EARLY E3A 11 6 KD HUMAN ADENOVIRUS TYPE 2  27– GLYCOPROTEIN 53PE311_ADE03 EARLY E3 9 0 KD HUMAN ADENOVIRUS TYPE 3  19– GLYCOPROTEIN 45PE311_ADE05 EARLY E3A 10 5 KD HUMAN ADENOVIRUS TYPE 5  20– GLYCOPROTEIN46 PE311_ADE07 EARLY E3 7 7 KD PROTEIN HUMAN ADENOVIRUS TYPE 7  36– 62PE314_ADE05 EARLY E3 14 5 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 108– 125PE315_ADE03 EARLY E3B 14 5 KD HUMAN ADENOVIRUS TYPE 3  52– PROTEINPRECURSOR 72 PE315_ADE07 EARLY E3B 14 9 KD HUMAN ADENOVIRUS TYPE 7  52–PROTEIN PRECURSOR 72 PE316_ADE03 EARLY E3 16 KD HUMAN ADENOVIRUS TYPE 3102– GLYCOPROTEIN 125 PE321_ADE03 EARLY E3 20 5 KD HUMAN ADENOVIRUS TYPE3 146– GLYCOPROTEIN 167 PE321_ADE07 EARLY E3 20 5 KD HUMAN ADENOVIRUSTYPE 7 146– GLYCOPROTEIN 167 PE322_ADEC1 EARLY E3 22 2 KD CANINEADENOVIRUS TYPE 1 155– GLYCOPROTEIN (STRAIN GLAXO) 177 PE3GL_ADEM1 EARLYE3 17 7 KD MOUSE ADENOVIRUS TYPE 1 105– GLYCOPROTEIN 127 PE411_ADE02PROBABLE EARLY E4 11 KD HUMAN ADENOVIRUS TYPE 2  56– PROTEIN 77PE411_ADE05 PROBABLE EARLY E4 11 KD HUMAN ADENOVIRUS TYPE 5  56– PROTEIN77 PE433_ADEM1 PROBABLE EARLY E4 33 KD MOUSE ADENOVIRUS TYPE 1  61–PROTEIN 80 PE434_ADE02 EARLY EA 34 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 80– 106 PEAD_EBV EARLY ANTIGEN PROTEIN D EPSTEIN-BARR VIRUS (STRAIN263– B95-8) 286 PEAR_EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS(STRAIN 159– B95-8) 184 PEBN2_EBV EBNA-2 NUCLEAR PROTEIN EPSTEIN-BARRVIRUS (STRAIN 126– B95-8) 141 PEBN3_EBV EBNA-3 NUCLEAR PROTEINEPSTEIN-BARR VIRUS (STRAIN 113– 662– B95-8) 131 683 PEFT1_VARV EARLYTRANSCRIPTION VARIOLA VIRUS  21– FACTOR 70 KD SUBUNIT 41 PENV1_FRSFV ENVPOLYPROTEIN FRIEND SPLEEN FOCUS-FORMING 380– PRECURSOR VIRUS 407PENV2_FRSFV ENV POLYPROTEIN FRIEND SPLEEN FOCUS-FORMING 380– PRECURSORVIRUS 407 PENV_AVIR3 ENV POLYPROTEIN AVIAN RETROVIRUS RPL30 206– 225PENV_AV1SU COAT PROTEIN GP37 AVIAN SARCOMA VIRUS (STRAIN  98– UR2) 117PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS 170– 202– (STRAIN M7)190 224 PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS  47–178– 434–  525– PRECURSOR (ISOLATE 106) 68 201 450 546 PENV_BIV17 ENVPOLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS  47– 147– 207–  463–  554–PRECURSOR (ISOLATE 127) 68 168 230 479 575 PENV_BLVAF ENV POLYPROTEINBOVINE LEUKEMIA VIRUS 303– (AMERICAN ISOLATE FLK) 327 PENV_BLVAU ENVPOLYPROTEIN BOVINE LEUKEMIA VIRUS 303– (AUSTRALIAN ISOLATE) 327PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303– (AMERICAN ISOLATEVDM) 327 PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303– (BELGIUMISOLATE LB285) 327 PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS(BELGIUM 303– ISOLATE LB59) 327 PENV_BLVJ ENV POLYPROTEIN BOVINELEUKEMIA VIRUS 303– (JAPANESE ISOLATE BLV-1) 327 PENV_FENVI ENVPOLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1  30– 225– 630– PRECURSOR 47 246651 PENV_FIVPE ENV POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1  30– 225–630– PRECURSOR 47 246 651 PENV_FLVC6 ENV POLYPROTEIN FELINE LEUKEMIAPROVIRUS  38– 624– PRECURSOR (CLONE CFE-6) 55 645 PENV_FLVGL ENVPOLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN  9– 447– 605– PRECURSORA/GLASGOW-1) 29 468 626 PENV_FL VLB ENV POLYPROTEIN FELINE LEUKEMIAVIRUS (STRAIN 467– 625– PRECURSOR LAMBDA-B1) 488 646 PENV_FLVSA ENVPOLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN 444– 602– PRECURSOR SARMA) 465623 PENV_FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS (FOAMY 153– 255–300–  481–  710–  864–  924–  957– VIRUS) 174 275 325 496 727 887 951978 PENV_FSVGA ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN 467– 625–PRECURSOR GARDNER-ARNSTEIN) 488 646 PENV_FSVGB ENV POLYPROTEIN FELINESARCOMA VIRUS (STRAIN 447– 605– PRECURSOR GA) 468 626 PENV_FSVSM ENVPOLYPROTEIN FELINE SARCOMA VIRUS (STRAIN 450– 608– PRECURSOR SM) 471 629PENV_FSVST ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN 467– PRECURSORSNYDER-THEILEN) 488 PENV_GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS519– PRECURSOR 540 PENV_HVIB1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCYVIRUS 498– TYPE 1 (OHIO ISOLATE) 520 PENV_HVIB8 GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 493– TYPE 1 (BUS ISOLATE) 515 PENV_HVIBN GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 494– TYPE 1 (BRAIN ISOLATE) 516PENV_HVIBR GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 503– TYPE 1 (BRUISOLATE) 525 PENV_HV1C4 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS428– TYPE I (CDC-451 ISOLATE) 448 PENV_HV1EL GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 495– TYPE I (ELI ISOLATE) 517 PENV_HV1H2 GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 498– TYPE I (HXB2 ISOLATE) 520PENV_HV1H3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 498– TYPE I(HXB3 ISOLATE) 520 PENV_HV1J3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCYVIRUS 510– TYPE I (JH3 ISOLATE) 532 PENV_H1JR GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 490– TYPE I (JRCSF ISOLATE) 512 PENV_HV1KB GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 504– 552– 752– TYPE I (STRAINKB-1-GP32) 526 579 768 PENV_HV1MA GP160 PRECURSOR HUMAN IMMUNODEFICIENCYVIRUS 500– TYPE I (MAL ISOLATE) 522 PENV_HV1MF GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 496– TYPE I (MFA ISOLATE) 518 PENV_HV1NS GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 178– TYPE I (NEW YORK-5 ISOLATE)203 PENV_HV1ND GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 488– TYPE I(NDK ISOLATE) 510 PENV_HV1OY GP160 PRECURSOR HUMAN IMMUNODEFICIENCYVIRUS 123– TYPE I (OYI ISOLATE) 140 PENV_HV1PV GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 498– TYPE I (PV22 ISOLATE) 520 PENV_HV1RH GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 445– TYPE I (RF/HAT ISOLATE) 460PENV_HV1S1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 489– 738– TYPE I(SF162 ISOLATE) 511 754 PENV_HV1S3 GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 300– TYPE I (SF33 ISOLATE) 322 PENV_HV1Z2 GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 123– 410– 495– TYPE I (Z2/CDC-Z34ISOLATE) 145 427 517 PENV_HV1Z3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCYVIRUS 117– 175– TYPE I (ZAIRE 3 ISOLATE) 133 198 PENV_HV1Z6 GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 497– TYPE I (ZAIRE 6 ISOLATE) 519PENV_HV1Z8 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 505– TYPE I(Z-84 ISOLATE) 527 PENV_HV1ZH GP160 PRECURSOR HUMAN IMMUNODEFICIENCYVIRUS 123– 438– 498– TYPE I (ZAIRE HZ321 ISOLATE) 142 453 520 PENV_HV2BEGP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS  3– 750– 781– TYPE 2(ISOLATE BEN) 26 775 804 PENV_HV2CA GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 750– TYPE 2 (ISOLATE CAM2) 777 PENV_HV2DI GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS  3– 741– 772– TYPE 2 (ISOLATED194) 26 766 795 PENV_HV2D2 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 9– TYPE 2 (ISOLATE D205.7) 28 PENV_HV2G1 GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 741– 772– TYPE 2 (ISOLATE GHANA-1) 766 795PENV_HV2NZ GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 742– 777– TYPE 2(ISOLATE N1H-Z) 767 800 PENV_HV2RO GP160 PRECURSOR HUMANIMMUNODEFICIENCY VIRUS 751– TYPE 2 (ISOLATE ROD) 776 PENV_HV2SB GP160PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 743– 778– TYPE 2 (ISOLATE SBL1SY)768 804 PENV_HV2ST GP160 PRECURSOR HUMAN IMMUNODEFICIENCY VIRUS 745–TYPE 2 (ISOLATE ST) 770 PENV_JSRV ENV POLYPROTEIN SHEEP PULMONARYADENOMATOSIS 104– 299– 376–  541– PRECURSOR VIRUS 119 325 398 564PENV_MCFF ENV POLYPROTEIN MINK CELL FOCUS-FORMING MURINE 600– PRECURSORLEUKEMIA VIRUS 621 PENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMINGMURINE 601– PRECURSOR LEUKEMIA VIRUS (ISOLATE C1- 622 PENV_MLVAV ENVPOLYPROTEIN AKV MURINE LEUKEMIA VIRUS 630– PRECURSOR 651 PENV_MLVCB ENVPOLYPROTEIN CAS-BR-E MURINE LEUKEMIA VIRUS 625– PRECURSOR 646 PENV_MLVF5ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 639– PRECURSOR (ISOLATE 57)660 PENV_MLVFF ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 639–PRECURSOR (ISOLATE FB29) 660 PENV_MLVFP ENV POLYPROTEIN FRIEND MURINELEUKEMIA VIRUS 639– PRECURSOR (ISOLATE PVC-211) 660 PENV_MLVHO ENVPOLYPROTEIN HOMULV MURINE LEUKEMIA VIRUS 626– PRECURSOR (MUS HORTULANUSVIRUS) 647 PENV_MLVKI ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS 167–188 PENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 629–PRECURSOR 650 PENV_MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS624– PRECURSOR 645 PENV_MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIAVIRUS 624– PRECURSOR (STRAIN KAPLAN) 645 PENV_MMTVB ENV POLYPROTEINMOUSE MAMMARY TUMOR VIRUS 643– (STRAIN BR6) 663 PENV_MMTVG eNVPOLYPROTEIN MOUSE MAMMARY TUMOR VIRUS 643– (STRAIN OR) 663 PENV_MPMV ENVPOLYPROTEIN SIMIAN MASON-PFIZER VIRUS 213– 235 PENV_MSVFB ENVPOLYPROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 170– 191 PENV_OMVVS ENVPOLYPROTEIN OVINE LENTI VIRUS (STRAIN 658– PRECURSOR SA-OMVV) 685PENV_RMCFV ENV POLYPROTEIN RAUSCHER MINK CELL FOCUS- 603– PRECURSORINDUCING VIRUS 624 PENV_RSVP ENV POLYPROTEIN ROUS SARCOMA VIRUS (STRAW 42– 533– PRAGUE C) 69 555 PENV_SFVI ENV POLYPROTEIN SIMIAN FOAMY VIRUS(TYPE 1) 300– 710– 864–  924–  957– 325 727 887 951 978 PENV_SFV3L ENVPOLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 157– 304– 707–  861–  921–  954–3/STRAIN LK3) 178 329 724 884 948 975 PENV_SIVAI GP160 PRECURSOR SIMIANIMMUNODEFICIENCY VIRUS 437– (AGM155 ISOLATE) 458 PENV_SIVAG GP160PRECURSOR SIMIAN IMMUNODEFICIENCY VIRUS 442– (AGM3 ISOLATE) 463PENV_SIVAI GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY VIRUS 421– (ISOLATEAGM/CLONE GR1-1) 442 PENV_SIVAT GP160 PRECURSOR SIMIAN IMMUNODEFICIENCYVIRUS 435– (TYO-I ISOLATE) 456 PENV_SIVGB GP160 PRECURSOR SIMIANIMMUNODEFICIENCY VIRUS  93– (ISOLATE GB1) 109 PENV_SIVMI GP160 PRECURSORSIMIAN IMMUNODEFICIENCY VIRUS 766– 803– (MM142-83 ISOLATE) 793 826PENV_SIVMK GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY VIRUS 139– 765– 802–(K6W ISOLATE) 154 792 825 PENV_SIVML GP160 PRECURSOR SIMIANIMMUNODEFICIENCY VIRUS 139– 764– 801– (K78 ISOLATE) 154 791 824PENV_SIVS4 GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY VIRUS 769– 806–(F236/SM114 ISOLATE) 789 829 PENV_SIVSP GP160 PRECURSOR SIMIANIMMUNODEFICIENCY VIRUS 773– 810– (PB3/BC13 ISOLATE) 793 833 PENV_SMSAV P15E PROTEIN SIMIAN SARCOMA VIRUS  42– 63 PENV_SRVI ENV POLYPROTEINSIMIAN RETROVIRUS SRV-1 213– 235 PERBA_AVIER ERBA ONCOGENE PROTEIN AVIANERYTHROBLASTOSIS VIRUS 227– (STRAIN ES4) 249 PETFI_FOWPI EARLYTRANSCRIPTION FOWLPOX VIRUS (STRAIN FP-1)  21–  73– FACTOR 41 92PETFI_SFVKA EARLY TRANSCRIPTION SHOPE FIBROMA VIRUS (STRAIN  21– FACTORKASZA) 41 PETFI_VACCC EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN  21–FACTOR COPENHAGEN) 41 PETFI_VACCV EARLY TRANSCRIPTION VACCINIA VIRUS(STRAIN WR)  21– FACTOR 41 PETF2_VACCC EARLY TRANSCRIPTION VACCINIAVIRUS (STRAIN  50– 101– 165–  285–  558– FACTOR 82 KD SUBUNITCOPENHAGEN) 73 117 187 308 582 PETF2_VACCV EARLY TRANSCRIPTION VACCINIAVIRUS (STRAIN WR)  48– FACTOR 82 KD SUBUNIT 72 PETF2_VARV EARLYTRANSCRIPTION VARIOLA VIRUS  50– 101– 165–  285–  558– FACTOR 82 KDSUBUNIT 73 117 187 308 582 PEXON_HSVI1 ALKALINE EXONUCLEASE HERPESSIMPLEX VIRUS (TYPE  65– 1/STRAIN 17) 180 PEXON_HSV2 ALKALINEEXONUCLEASE HERPES SIMPLEX VIRUS (TYPE 2)  55– 170 PEXON_HSVEB ALKALINEEXONUCLEASE EQUINE HERPESVIRUS TYPE 1 276– (STRAIN AB4P) 291 PEXON_PRVN3ALKALINE EXONUCLEASE PSEUDORABIES VIRUS (STRAIN  36– NIA-3) 51PEXON_VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAIN  28– 217–DUMAS) 44 262 PF1B2_ADE40 41 4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40116– 133 PF1B2_ADE41 41 4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 116–133 PF1BP_ADE03 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 3 152– 173PF1BP_ADE05 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 5 447– 473 PF1BP_ADEB3FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3 347– 775– (MASTADENOVIRUS BOS3)372 801 PF1BP_ADEC1 FIBER PROTEIN CANINE ADENOVIRUS TYPE 1 382– (STRAINGLAXO) 397 PF1BP_ADEM1 FIBER PROTEIN MOUSE ADENOVIRUS TYPE 1 191– 227–493–  548–  579– 215 252 513 571 599 PGAG_AVEV1 GAG POLYPROTEIN AVIANENDOGENOUS VIRUS EV-I  53– 78 PGAG_AVEV2 GAG POLYPROTEIN AVIANENDOGENOUS ROUS-  2– ASSOCIATED VIRUS-0 27 PGAG_AVIMC GAG POLYPROTEINAVIAN MYELOCYTOMATOSIS VIRUS  53– MC29 78 PGAG_AVIMD GAG POLYPROTEINAVIAN MYELOCYTOMATOSIS VIRUS  53– HB1 78 PGAG_AVISU CORE PROTEIN P19AVIAN SARCOMA VIRUS (STRAIN  53– UR2) 78 PGAG_AVISY GAG POLYPROTEINAVIAN SARCOMA VIRUS (STRAIN  53– Y73) 78 PGAG_BAEVM GAG POLYPROTEINBABOON ENDOGENOUS VIRUS 397– (STRAIN M7) 422 PGAG_BLVAU GAG POLYPROTEINBOVINE LEUKEMIA VIRUS 212– (AUSTRALIAN ISOLATE) 238 PGAG_BLVI GAGPOLYPROTEIN BOVINE LEUKEMIA VIRUS 213– (JAPANESE ISOLATE BLV-1) 239PGAG_CAEVC GAG POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS 102– VIRUS(STRAIN CORK) 119 PGAG_FUJSV GAG POLYPROTEIN FUJINAMI SARCOMA VIRUS  53–78 PGAG_HTLIA GAG POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS  77– TYPE 1(STRAIN ATK) 94 PGAG_HTLIC GAG POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 77– TYPE 1 (CARIBBEAN ISOLATE) 94 PGAG_HTLIM GAG POLYPROTEIN HUMANT-CELL LEUKEMIA VIRUS  77– TYPE 1 (ISOLATE MT-2) 94 PGAG_HVIA2 GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1 (ARV2/SF2 ISOLATE)91 PGAG_HVIB1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1(BH10 ISOLATE) 91 PGAG_HVIB5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS  65– TYPE 1 (BH5 ISOLATE) 91 PGAG_HVIBR GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  65– TYPE 1 (BRU ISOLATE) 91 PGAG_HVIC4 GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1 (CDC-451 ISOLATE)91 PGAG_HVIEL GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1(ELI ISOLATE) 91 PGAG_HVIH2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 65– TYPE 1 (HXB2 ISOLATE) 91 PGAG_HVIJ3 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  65– TYPE 1 (JH3 ISOLATE) 91 PGAG_HVIJR GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1 (JRCSF ISOLATE) 91PGAG_HVIMA GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 262– TYPE 1 (MALISOLATE) 285 PGAG_HVIMN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 65– TYPE 1 (MN ISOLATE) 91 PGAG_HVIN5 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  65– TYPE 1 (NEW YORK-5 ISOLATE) 91 PGAG_HVINDGAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– 352– TYPE 1 (NDKISOLATE) 91 373 PGAG_HVIOY GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 65– TYPE 1 (OY1 ISOLATE) 91 PGAG_HVIPV GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  65– TYPE 1 (PV22 ISOLATE) 91 PGAG_HVIRH GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1 (RF/HAT ISOLATE) 91PGAG_HVIU4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS  65– TYPE 1(STRAIN UGANDAN/ISO 91 PGAG_HVIW2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS  65– TYPE 1 (WMJ2 ISOLATE) 91 PGAG_HVIZ2 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  65– TYPE 1 (Z2/CDC-Z34 ISOLATE) 91 PGAG_IPMARETROVIRUS-RELATED GAG MOUSE INTRACISTERNAL A-PARTICLE 757– POLYPROTEIN772 PGAG_MMTVB GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS  82– (STRAINBR6) 97 PGAG_MMTVC GAO POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS  82–(STRAIN C311) 97 PGAG_MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS 82– (STRAIN GR) 97 PGAG_RSVP GAG POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN 53– PRAGUE C) 78 PGAG_SCVLA MAJOR COAT PROTEIN SACCHAROMYCES CEREVISIAEVIRUS 618– L-A 645 PGAG_SFVI GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 85– 103 PGAG_5FV3L GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE  83–3/STRAIN LK3) 101 PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 189– (AGMI 55 ISOLATE) 213 PGAG_SIVAG GAG POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 193– (AGM3 ISOLATE) 217 PGAG_SIVAT GAGPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 189– (TYO-1 ISOLATE) 213PGAG_SIVCZ GAG POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY  66– VIRUS(SIV(CPZ)) 92 PGAG_SIVON GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 66– (ISOLATE GB1) 92 PGAG_SIVMI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS (MM142-83 ISOLATE) PGAG_SMRVH GAG POLYPROTEIN SQUIRREL MONKEYRETROVIRUS 286– (SMRV-H) 307 PGLRX_VACCC POSSIBLE GLUTAREDOXIN VACCINIAVIRUS (STRAIN  71– COPENHAGEN), AND (STRAIN L-IVP) 87 PGLRX_VARVPOSSIBLE GLUTAREDOXIN VARIOLA VIRUS  71– 87 PGRAN_GVAS GRANULIN AGROTISSEGETUM GRANULOSIS 208– VIRUS 226 PGRAN_GVTN GRANULIN TRICIIOPLUSIA NIGRANULOSIS 209– VIRUS 227 PGRFA_VACCC GROWTH FACTOR VACCINIA VIRUS(STRAIN 104– COPENHAGEN) 124 PGRFA_VACCV GROWTH FACTOR VACCINIA VIRUS(STRAIN WR) 104– 123 PGRFA_VARV GROWTH FACTOR VARIOLA VIRUS 104– 122PHELI_EBV PROBABLE HELICASE EPSTEIN-BARR VIRUS (STRAIN 180– 338– 438–B95-8) 207 361 464 PHELI_HCMVA PROBABLE HELICASE HUMAN CYTOMEGALOVIRUS(STRAIN 397– 539– 826– AD169) 420 560 852 PHELI_HSVII PROBABLE HELICASEHERPES SIMPLEX VIRUS (TYPE 389– 628– 1/STRAIN 17) 408 646 PHELI_HSV2HPROBABLE HELICASE HERPES SIMPLEX VIRUS (TYPE 290– 529– 2/STRAIN HG52)309 554 PHELI_HSVEB PROBABLE HELICASE EQUINE HERPESVIRUS TYPE 1 181–243– 394– (STRAIN AB4P) 204 266 413 PHELI_HSVSA PROBABLE HELICASEHERPESVIRUS SAIMIRI (STRAIN II) 327– 389– 658– 350 411 683 PHELI_VZVDPROBABLE HELICASE VARICELLA-ZOSTER VIRUS (STRAIN 165– 383– 561–  761–DUMAS) 189 402 578 786 PHEMA_CDVO HEMAGGLUTININ- CANINE DISTEMPER VIRUS(STRAIN  36– 200– NEURAMINIDASE ONDERSTEPOORT) 53 223 PHEMA_CVBFHEMAGGLUTININ-ESTERASE BOVINE CORONA VIRUS (STRAIN 391– PRECURSOR F15)415 PHEMA_CVBLY HEMAGGLUTININ-ESTERASE BOVINE CORONA VIRUS (STRAIN 391–PRECURSOR LY-138) 415 PHEMA_CVBM HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN 391– PRECURSOR MEBUS) 415 PHEMA_CVBQHEMAGGLUTININ-ESTERASE BOVINE CORONA VIRUS (STRAIN 391– PRECURSORQUEBEC), AND (STRAIN L9) 415 PHEMA_CVHOC HEMAGGLUTININ-ESTERASE HUMANCORONA VIRUS (STRAIN 391– PRECURSOR OC43) 415 PHEMA_CVMA5HEMAGGLUTININ-ESTERASE MURINE CORONA VIRUS MHV 402– PRECURSOR (STRAINA59) 423 PHEMA_CVMS HEMAGGLUTININ-ESTERASE MURINE CORONA VIRUS MHV 403–PRECURSOR (STRAIN S) 418 PHEMA_IAAIC HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN  37– 322– A/AICHI/2/68) 59 339 PHEMA_IABAN HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN  21– 306– A/BANGKOK/1/79) 43 323PHEMA_IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 320–A/BUDGERIGAR/HOKKAIDO/1/77) 337 PHEMA_IACKA HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 320– A/CHICKEN/ALABAMA/1/75) 337 PHEMA_IACKGHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  81– 231– 316–A/CHICKEN/GERMANY/N/49) 101 247 333 PHEMA_IACKP HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 302– A/CHICKEN/PENNSYLVANIA/1/83) 319PHEMA_IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 302–A/CHICKEN/PENNSYLVANIA/1370/83) 319 PHEMA_IACKS HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 319– A/CHICKEN/SCOTLAND/59) 336 PHEMA_IACKVHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315–A/CHICKEN/VICTORIA/1/85) 246 332 PHEMA_IADA1 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 320– A/DUCK/ALBERTA/28/76) 337 PHEMA_IADA3HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  37– 322–A/DUCK/ALBERTA/78/76) 59 339 PHEMA_IADCZ HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 320– A/DUCK/CZECHOSLOVAKIA/56) 337 PHEMA_IADE1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 266– 319–A/DUCK/ENGLAND/1/56) 287 336 PKEMA_IADH1 HEMAGGLUTOIIN PRECURSORINFLUENZA A VIRUS (STRAIN 306– A/DUCK/HOKKAIDO/5/77) 323 PHEMA_IADH2HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  21– 306–A/DUCK/HOKKAIDO/8/80) 43 323 PHEMA_IADH3 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  21– 306– A/DUCK/HOKKAIDO/33/80) 43 323PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  21– 306–A/DUCK/HOKKAIDO/7/82) 43 323 PHEMA_IADH5 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  21– 215– A/DUCK/HOKKAIDO/21/82) 43 237PHEMA_IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  21– 306–A/DUCK/HOKKAIDO/9/85) 43 323 PHEMA_IADH7 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  21– 306– A/DUCK/HOKKAIDO/10/85) 43 323PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  37– 322–A/DUCK/MEMPHIS/928/74) 59 339 PHEMA_IADMA HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  28–  81– A/DUCK/MANITOBA/1/53) 50 101PHEMA_1ADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 320–A/DUCK/NEW ZEALAND/31/76) 337 PHEMA_1ADU3 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  37– 322– A/DUCK/UKRAINE/1/63) 59 339PHEMA_IAEN6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN  21– 306–A/ENGLAND/878/69) 43 323 PHEMA_IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN  37– 322– A/ENGLAND/321/77) 59 339 PHEMA_IAFPRHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315– A/FOWLPLAGUE VIRUS/ROSTOCK/34) 246 332 PHEMA_IAGRE HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 320– A/GREY TEAL/AUSTRALIA/2/79) 337PHEMA_IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 320–A/GULL/MARYLAND/704/77) 337 PHEMA_IAGUA HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 319– A/GULL/ASTRAKHAN/227/84) 336 PHEMA_IAHALHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 321– A/EQUINE/ALGIERS/72) 338 PHEMA_IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 230– 315– A/EQUINE/CAMBRIDGE/1/63) 246 332 PHEMA_IAHC7HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315–A/EQUINE/CAMDRIDGE/1/73) 246 332 PHEMA_IAHCD HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 230– 315– A/EQUINE/C DETROIT/1/64) 246 332PHEMA_IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315–A/EQUINE/DETROIT/1/64) 246 332 PHEMA_1AHFO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 236– 321– A/EQUINE/FONTAINEBLEAU/76) 252 338PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 321–A/EQUINE/KENTUCKY/2/86) 338 PHEMA_1AHK7 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 236– 321– A/EQUINE/KENTUCKY/1/87) 252 338PHEMA_IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315–A/EQUINE/LEXINGTON/1/66) 246 332 PHEMA_IAHLO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 230– 315– A/EQUINE/LONDON/1416/73) 246 332PHEMA_IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 236– 321–A/EQUINE/MIAMI/1/63) 252 338 PHEMA_1AHNM HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 236– 321– A/EQUINE/NEW MARKET/76) 252 338PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 315–A/EQUINE/NEW MARKET/1/77) 332 PHEMA_IAHPR HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 315– A/EQUTNE/PRAGUE/1/56) 332 PHEMA_IAHROHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 236– 321–A/EQUINE/ROMANIA/80) 252 338 PHEMA_IAHSA HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 236– 321– A/EQUINE/SANTIAGO/1/85) 252 338PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315–A/EQUINE/SAO PAULO/1/76) 246 332 PHEMA_tAHSW HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 230– 315– A/EQUINE/SWITZERLAND/137/72) 246 332PHEMA_IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 236– 321–A/EQUINE/TENNESSEE/5/86) 252 338 PHEMA_IAHTO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 236– 321– A/EQUINE/TOKYO/71) 252 338PHEMA_IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 236– 321–A/EQUINE/URUGUAY/1/63) 252 338 PHEMA_IAJAP HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 317– A/JAPAN/305/57) 334 PHEMA_IAMAAHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 197– 319–A/MALLARD/ASTRAKHAN/244/82) 223 336 PHEMA_IAMAB HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 202– 324– A/MALLARD/ASTRAKHAN/263/82) 228 341PHEMA_JAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  37– 322–A/MALLARD/NEW YORX/6874/78) 59 339 PHEMA_1AME1 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  37– 322– A/MEMPHIS/1/71) 59 339 PHEMA_IAME2HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  37– 322– A/MEMPHIS/102/72) 59 339 PHEMA_IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN  21– 306– A/MEMPHIS/6/86) 43 323 PHEMA_IAMIN HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN  85– 231– 316– A/MINK/SWEDEN/84) 101247 333 PHEMA_IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 37– 322– A/NT/60/68) 59 339 PHEMA_IAPIL HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 320– A/PILOT WHALE/MAINE/328/84) 337PHEMA_IAQU7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  21– 306–A/QU/7/70) 43 323 PHEMA_1ARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 320– A/RUDDY TURNSTONE/NEW 337 JERSEY/47/ PHEMA_IASE2HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 320–A/SEAL/MASSACHUSETTS/133/82) 337 PHEMA_IASH2 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 234– 321– A/SHEARWATER/AUSTRALIA/72) 250 338PHEMA_IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 230– 315–A/STARLING/VICTORIA/5156/85) 246 332 PHEMA_IATKM HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  33– 320– A/TURKEY/MINNESOTA/833/80) 55 337PHEMA_IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 233–A/TURKEY/ONTARIO/7732/66) 249 PHEMA_IATKR HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 230– A/TURKEY/OREGON/71) 246 PHEMA_IATKWHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 229–A/TURKEY/WISCONSIN/1/66) 245 PHEMA_IAUDO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  37– 322– 380– A/UDORN/307/72) 59 339 397PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  38– 323–A/VICTORIA/3/75) 60 340 PHEMA_IAX31 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN X-31)  37– 59 PHEMA_IAZCO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  37– 322– A/SWINE/COLORADO/1/77) 59 339PHEMA_IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  21– 306–A/SWINE/HONG KONG/81/78) 43 323 PHEMA_IA2H3 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN  21– 306– A/SWINE/HONG KONG/126/82) 43 323PHEMA_IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN  37– 322–A/SWINE/UKKEL/1/84) 59 339 PHEMA_INBAA HEMAGGLUTININ PRECURSOR INFLUENZAB VIRUS (STRAIN 115– 295– B/ANN ARBOR/1/86) 131 310 PHEMA_INBBEHEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 123– 301–B/BEIJING/1/87) 139 316 PHEMA_INBBO HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN 116– 293– B/BONN/43) 132 308 PHEMA_INBEN HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN 123– 301– B/ENGLAND/222/82) 139 316PHEMA_INBFU HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108– 286–B/FUKUOKA/80/81) 124 301 PHEMA_INBGL HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN 119– 296– B/GL/54) 135 311 PHEMA_INBHK HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN 116– 293– B/HONG KONG/8/73) 132 308PHEMA_INBIB HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108– 288–D/IBARAKI/2/85) 124 303 PHEMA_INBID HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN 120– 299– B/ID/86) 136 314 PHEMA_INBLE HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN 123– 302– B/LEE/40) 139 317PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 113– 292–B/MARYLAND/59) 129 307 PHEMA_JNBME HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN 116– 296– B/MEMPHIS/6/86) 132 311 PHEMA_INBNAHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108– 288– B/NAGASAKI/1/87) 124303 PHEMA_INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 123–301– B/OREGON/5/80) 139 316 PHEMA_INBSI HEMAGGLUTININ PRECURSORINFLUENZA B VIRUS (STRAIN 123– 301– B/SINGAPORE/222/79) 139 316PHEMA_INBSJ HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 119– 298–B/SINGAPORE/64) 135 313 PHEMA_INBUS HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN 116– 294– B/USSR/100/83) 132 309 PHEMA_INBVI HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN 116– 296– B/VICTORIA/3/85) 132 311PHEMA_INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 123– 303–B/VICTORIA/2/87) 139 318 PHEMA_INBYB HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 108– 286– B/YAMAGATA/16/88) 124 301 PHEMA_INCCA HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN 442– C/CALIFORNIA/78) 466PHEMA_INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 430–C/ENGLAND/892/83) 454 PHEMA_INCGL HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS (STRAIN 430– C/GREAT LAKES/1167/54) 454 PHEMA_INCHY HEMAGGLUTINININFLUENZA C VIRUS (STRAIN 429– C/HYOGO/1/83) 453 PHEMA_INCJHHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 443–C/JOHANNESBURG/1/66) 467 PHEMA_INCKY HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 429– C/KYOTO/41/82) 453 PHEMA_INCMI HEMAGGLUTININ PRECURSORINFLUENZA C VIRUS (STRAIN 429– C/MISSISSIPPI/80) 453 PHEMA_INCNAHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 429– C/NARA/82) 453 PHEMA_INCP1HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 430–C/PIG/BEIJING/10/81) 454 PHEMA_INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS (STRAIN 430– C/PIG/BEIJING/115/81) 454 PHEMA_INCP3 HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN 430– C/PIG/BEIJING/439/82) 454PHEMA_INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 430–C/TAYLOR/1233/47) 454 PHEMA_INCYA HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS (STRAIN 430– C/YAMAGATA/10/81) 454 PHEMA_MUMPI HEMAGGLUTININ-MUMPS VIRUS (STRAIN SBL-1) 101– 133– 225–  367–  397– NEURAMINIDASE 125148 246 394 417 PHEMA_MUMPM HEMAGGLUTININ- MUMPS VIRUS (STRAIN MIYAHARA101– 133– 225–  367–  397– NEURAMINIDASE VACCINE) 125 148 246 394 417PHEMA_MUMPR HEMAGGLUTININ- MUMPS VIRUS (STRAIN RW) 101– 133– 225–  367– 397– NEURAMINIDASE 125 148 246 394 417 PHEMA_MUMPS HEMAGGLUTININ- MUMPSVIRUS (STRAIN SBL) 101– 133– NEURAMINIDASE 125 148 PHEMA_NDVAHEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  93– NEURAMINIDASE (STRAINAUSTRALIA-VICTORIA/32) 110 PHEMA_NDVB HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS  93– NEURAMINIDASE (STRAIN BEAUDETTE C/45) 110 PHEMA_NDVDHEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  93– NEURAMINIDASE (STRAIND26/76) 110 PHEMA_NDVH4 HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  93–NEURAMINIDASE (STRAIN BI-HITCHNER/47) 110 PHEMA_NDV1 HEMAGGLUTININ-NEWCASTLE DISEASE VIRUS  93– NEURAMINIDASE (STRAIN ITALIEN/45) 110PHEMA_NDVM HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  93– NEURAMINIDASE(STRAIN MIYADERA/51) 110 PHEMA_NDVQ HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS  93– NEURAMINIDASE (STRAIN QUEENSLAND/66) 110 PHEMA_NDVTGHEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  93– NEURAMINIDASE (STRAIN TEXASG B/48) 110 PHEMA_NDVU HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS  93–NEURAMINIDASE (STRAIN ULSTER/67) 110 PHEMA_PHODV HEMAGGLUTININ- PHOCINEDISTEMPER VIRUS  36– 213– 493– NEURAMINIDASE 58 234 513 PHEMA_PI1HWHEMAGGLUTININ- HUMAN PARAINFLUENZA 1 VIRUS  29– 322– 345–  486–NEURAMINIDASE (STRAIN WASHINGTON/1957) 53 342 360 503 PHEMA_PI2HHEMAGGLUTININ- HUMAN PARAINFLUENZA 2 VIRUS  13–  65– 118– NEURAMINIDASE(PIV-2) 40 88 136 PHEMA_PI2HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 2 VIRUS 13–  65– 118– NEURAMINIDASE (STRAIN TOSHIBA) 40 88 136 PHEMA_PI3BHEMAGGLUTININ- BOVINE PARAINFLUENZA 3 VIRUS 111– 272– 324– NEURAMINIDASE128 299 340 PHEMA_PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111–272– 324– NEURAMINIDASE (STRAIN NIH 47885) 128 299 340 PHEMA_PI3HAHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111– 272– 324– NEURAMINIDASE(STRAIN AUS/124854/74) 128 299 340 PHEMA_PI3HT HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 111– 272– 324– NEURAMINIDASE (STRAIN TEX/545/80)128 299 340 PHEMA_PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111–272– 324– NEURAMINIDASE (STRAIN TEX/9305/82) 128 299 340 PHEMA_PI3HVHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111– 272– 324– NEURAMINIDASE(STRAIN TEX/12677/83) 128 299 340 PHEMA_PI3HW HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 111– 272– 324– NEURAMINIDASE (STRAIN WASH/641/79)128 299 340 PHEMA_PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111–272– 324– NEURAMINIDASE (STRAIN WASH/1511/73) 128 299 340 PHEMA_RI4HAHEMAGGLUTININ- HUMAN PARAINFLUENZA 4A VIRUS  50– NEURAMINIDASE (STRAINTOSHIBA) 67 PHEMA_RINDK HEMAGGLUTININ- RINDERPEST VIRUS (STRAIN 368–NEURAMINIDASE KABETE O) 383 PHEMA_RINDL HEMAGGLUTININ- RINDERPEST VIRUS(STRAIN L)  4– NEURAMINIDASE 30 PHEMA_SEND5 HEMAGGLUTININ- SENDAI VIRUS(STRAIN Z/HOST 322– NEURAMINIDASE MUTANTS) 342 PHEMA_SENDFHEMAGGLUTININ- SENDAI VIRUS (STRAIN IIIMIIMI) 322– NEURAMINIDASE 342PHEMA_SENDH HEMAGGLUTININ- SENDAI VIRUS (STRAIN HARRIS) 322–NEURAMINIDASE 342 PHEMA_SENDI HEMAGGLUTININ- SENDAI VIRUS (STRAIN HVJ)322– NEURAMINIDASE 342 PHEMA_SENDZ HEMAGGLUTININ- SENDAI VIRUS (STRAINZ) 322– NEURAMINIDASE 342 PHEMA_SV41 HEMAGGLUTININ- SIMIAN VIRUS 41  55– 85– 107– NEURAMINIDASE 73 102 132 PHEMA_SV5 KEMAGGLUTINTN- SIMIAN VIRUS5 (STRAIN W3)  7–  84– 379– NEURAMINIDASE 28 101 400 PHEMA_SV5CMHEMAGGLUTININ- SIMIAN VIRUS 5 (ISOLATE  7–  84– 379– NEURAMINIDASECANINE/CPI) 28 101 400 PHEMA_SV5CP HEMAGGLUTININ- SIMIAN VIRUS 5(ISOLATE  7–  84– 379– NEURAMINIDASE CANINE/CPI) 28 101 400 PHEMA_SV5LNHEMAGGLUTININ-  7–  84– 379– NEURAMINIDASE 28 101 400 PHEMA_VACCCHEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN 173– COPENHAGEN) 192PHEMA_VACCI HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN IHD-J) 173–192 PHEMA_VACCT HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN TIAN 173–TAN) 192 PHEMA_VACCV HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN WR)173– 192 PHEMA_VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS 175– 194PHEX8_ADE02 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 2  38– 119–PRECURSOR 61 140 PHEX8_ADE03 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUSTYPE 3  27– PRECURSOR 48 PHEX8_ADE05 HEXON-ASSOCIATED PROTEIN HUMANADENOVIRUS TYPE 5  38– 119– PRECURSOR 61 140 PHEX8_ADE41HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 41  38– 128– PRECURSOR 61146 PHEX8_ADEM1 HEXON-ASSOCIATED PROTEIN MOUSE ADENOVIRUS TYPE 1  36–PRECURSOR 52 PHEX9_ADE07 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE7, AND 3  92– 117 PHEX9_ADEC2 HEXON-ASSOCIATED PROTEIN CANINE ADENOVIRUSTYPE 2  52– 77 PHEX9_ADENT HEXON-ASSOCIATED PROTEIN TUPAIA ADENOVIRUS 60– 82 PHRG_COWPX HOST RANGE PROTEIN COWPOX VIRUS 517– 558– 609– 533583 636 PI117_ASFB7 LATE PROTEIN I177L AFRICAN SWINE FEVER VIRUS  68–(STRAIN BA71V) 83 PI196_ASFB7 LATE PROTEIN I196L AFRICAN SWINE FEVERVIRUS 169– (STRAIN BA71V) 190 PI226_ASFB7 LATE PROTEIN I226R AFRICANSWINE FEVER VIRUS  60– (STRAIN BA71V) 77 PI329_ASFB7 LATE PROTEIN I329LAFRICAN SWINE FEVER VIRUS 239– PRECURSOR (STRAIN BA71V) 260 PI78_ASFB7EARLY PROTEIN I78R AFRICAN SWINE FEVER VIRUS  2– (STRAIN BA71V) 29PIBMP_SOCMV INCLUSION BODY MATRIX SOYBEAN CHLOROTIC MOTTLE VIRUS  97–PROTEIN 119 PIC18_EBV PROBABLE PROCESSING AND EPSTEIN-BARR VIRUS (STRAIN101– 131– 759– TRANSPORT PROTEIN B95-8) 123 153 777 PIC18_HCMVA PROBABLEPROCESSING AND HUMAN CYTOMEGALOVIRUS (STRAIN 156– 202– TRANSPORT PROTEINAD169) 176 222 PIC18_HSViI PROCESSING AND TRANSPORT HERPES SIMPLEX VIRUS(TYPE  8–  45– 122–  751– PROTEIN 1/STRAIN 17) 29 61 143 768 PIC18_HSVIAPROCESSING AND TRANSPORT HERPES SIMPLEX VIRUS (TYPE  8–  45– 122–  751–PROTEIN 1/STRAIN ANGELOTTI) 29 61 143 768 PIC18_HSVIF PROCESSING ANDTRANSPORT HERPES SIMPLEX VIRUS (TYPE  8– 122– 746– PROTEIN 1/STRAIN F)29 143 763 PIC18_HSVB2 PROBABLE PROCESSING AND BOVINE HERPESVIRUS TYPE 2 12– 130– TRANSPORT PROTEIN (STRAIN BMV) 37 151 PIC18_HSVEB PROBABLEPROCESSING AND EQUINE HERPESVIRUS TYPE 1  37– 129– 732– TRANSPORTPROTEIN 56 144 755 PIC18_HSVSA PROBABLE PROCESSING AND HERPESVIRUSSAIMIRI (STRAIN 11)  27–  51– 647– TRANSPORT PROTEIN 49 78 672PIC18_MCMVS PROBABLE PROCESSING AND MURINE CYTOMEGALOVIRUS 126– 202–386– TRANSPORT PROTEIN (STRAIN SMITH) 144 229 411 PIC18_PRVIF PROBABLEPROCESSING AND PSEUDORABIES VIRUS (STRAIN 285– 698– TRANSPORT PROTEININDIANA-FUNKHAUSER/BECKER) 307 718 PIC18_VZVD PROBABLE PROCESSING ANDVARICELLA-ZOSTER VIRUS (STRAIN  69– 619– 725– TRANSPORT PROTEIN DUMAS)88 639 744 PICPO_HSV1I IMMEDIATE-EARLY PROTEIN HERPES SIMPLEX VIRUS(TYPE 668– 1/STRAIN 17) 684 PICPO_HSV2H VMW118 PROTEIN HERPES SIMPLEXVIRUS (TYPE 713– 2/STRAIN HG52) 729 PICPO_PRVTF EARLY PROTEIN 0PSEUDORABIES VIRUS (STRAIN  82– INDIANA-FUNKHAUSER/BECKER) 102PICPO_HSVIF INFECTED CELL PROTEIN HERPES SIMPLEX VIRUS (TYPE 211–1/STRAIN F) 227 PICPO_HSVII TRANS-ACTING HERPES SIMPLEX VIRUS (TYPE  81–621– TRANSCRIPTIONAL PROTEIN 1/STRAIN 17) 98 637 PICPO_HSVEBTRANS-ACTING EQUINE HERPESVIRUS TYPE 1 708– 736– TRANSCRIPTIONAL PROTEIN(STRAIN AB4P) 725 759 PICPO_HSVEK TRANS-ACTING EQUINE HERPESVIRUS TYPE 1708– 736– TRANSCRIPTIONAL PROTEIN (STRAIN KENTUCKY A) 725 759PICPO_HSVMG TRANS-ACTING MAREK'S DISEASE HERPESVIRUS 488– 585– 1202– TRANSCRIPTIONAL PROTEIN (STRAIN GA) 506 611 1218 PICPO_VZVD TRANS-ACTINGVARICELLA-ZOSTER VIRUS (STRAIN 547– TRANSCRIPTIONAL PROTEIN DUMAS) 563PIE18_PRVIF IMMEDIATE-EARLY PROTEIN IE180 PSEUDORABIES VIRUS (STRAIN731– INDIANA-FUNKHAUSER/BECKER) 748 PIE18_PRVKA IMMEDIATE-EARLY PROTEINIE180 PSEUDORABIES VIRUS (STRAIN 720– KAPLAN) 737 PIE63_HCMVATRANSCRIPTIONAL HUMAN CYTOMEGALOVIRUS (STRAIN 286– 364– REGULATOR IE63AD169) 304 313 HOMOLOG ( PIE63_HSV1I TRANSCRIPTIONAL HERPES SIMPLEXVIRUS (TYPE 378– REGULATOR IE63 1/STRAIN 17) 394 PIE63_HSV2HTRANSCRIPTIONAL HERPES SIMPLEX VIRUS (TYPE 378– REGULATOR IE63 2/STRAINHG52) 394 PIE63_HSVEB TRANSCRIPTIONAL EQUINE HERPES VIRUS TYPE 1 337–385– REGULATOR IE63 HOMOLOG (STRAIN A1MP) 353 406 PIE63_HSVSA 52 KDIMMEDIATE-EARLY HERPESVIRUS SAIMIRI (STRAIN 11) 301– PHOSPHOPROTEIN 326PIE68_HSVII IMMEDIATE-EARLY PROTEIN HERPES SIMPLEX VIRUS (TYPE 189– IE681/STRAIN 17) 205 PIE68_HSVE4 IMMEDIATE-EARLY PROTEIN EQUINE HERPESVIRUSTYPE 4  81– IE68 104 PIE68_HSVEB IMMEDIATE-EARLY PROTEIN EQUINEHERPESVIRUS TYPE 1  93– 116 PIE68_PRVKA IMMEDIATE-EARLY PROTEINPSEUDORABIES VIRUS (STRAIN  85– KAPLAN) 108 PIE68_VZVD GENE 63/70PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN  57– DUMAS) 78 PIR14_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN 117– AD160) 137PKERB_AVIER ERBB TYROSINE KINASE AVIAN ERYTHROBLASTOSIS VIRUS  64– 297–TRANSFORMING PROTEIN 84 324 PKFES_FSVGA TYROSINE-PROTEIN KINASE FELINESARCOMA VIRUS (STRAIN  73– TRANSFORMING PROT GARDNER-ARNSTEIN) 88PKFES_FSVST TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS (STRAIN  2–TRANSFORMING PROT SNYDER-THEILEN) 22 PKFGR_FSVGR TYROSINE-PROTEIN KINASEFELINE SARCOMA VIRUS (STRAIN 269– TRANSFORMING PROT GARDNER-RASHEED) 288PKFMS_FSVMD FMS TYROSINE KINASE FELINE SARCOMA VIRUS (STRAIN 141– 243–434–  548–  781–  856– TRANSFORMING PROTEIN MCDONOUGH) 159 263 450 563801 877 PKFPS_AVISP TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN247– TRANSFORMING PROT PRC11) 274 PKFPS_FUJSV TYROSINE-PROTEIN KINASEFUJINAMI SARCOMA VIRUS 259– 346– 400–  587– TRANSFORMING PROT 275 370420 614 PKITH_ASFB7 THYMIDINE KINASE AFRICAN SWINE FEVER VIRUS  18–(STRAIN BA71V) 41 PKITH_EBV THYMIDINE KINASE EPSTEIN-BARR VIRUS (STRAIN403– 428– B95-8) 418 446 PKITH_FLDV THYMIDINE KINASE FISH LYMPHOCYSTISDISEASE VIRUS  96– 252– 117 275 PKITH_HSV1I THYMIDINE KINASE HERPESSIMPLEX VIRUS (TYPE 223– 1/STRAIN 17) 249 PKITH_HSV1C THYMIDINE KINASEHERPES SIMPLEX VIRUS (TYPE 223– 1/STRAIN CL101 249 PKITH_HSV1E THYMIDINEKINASE HERPES SIMPLEX VIRUS (TYPE 223– 1/STRAIN HFEM) 249 PKITH_HSV1KTHYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 223– 1/STRAIN KOS) 249PKITH_HSV1S THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 223– 1/STRAINSC16) 249 PKITH_HSV23 THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 224–333– 2/STRAIN 333) 250 348 PKITH_HSVB6 THYMIDINE KINASE BOVINEHERPESVIRUS TYPE 1 193– 280– (STRAIN 6660) 219 304 PKITH_HSVBH THYMIDINEKINASE BOVINE HERPESVIRUS TYPE 2 180– (STRAIN BHM-1) 202 PKITH_HSVBMTHYMIDINE KINASE BOVINE HERPES VIRUS TYPE 3 381– 609– (STRAIN WC11) 399633 PKITH_HSVBQ THYMIDINE KINASE BOVINE HERPESVIRUS TYPE 1 2 194– 282–(STRAIN Q3932) 220 306 PKITH_HSVE4 THYMIDINE KINASE EQUINE HERPES VIRUSTYPE 4 174– 261– (STRAIN 1942) 193 284 PKITH_HSVEB THYMIDINE KINASEEQUINE HERPESVIRUS TYPE 1  18– 174– 274– (STRAIN AB4P) AND (ISOLATE 33193 298 HVS2SA) PKITH_HSVF THYMIDINE KINASE FELINE HERPESVIRUS (FELID171– HERPESVIRUS 1) 189 PKITH_HSVII THYMIDINE KINASE ICTALURIDHERPESVIRUS 1  14– 32 PKITH_HSVMR THYMIDINE KINASE MARMOSET HERPESVIRUS189– 215 PKITH_HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI (STRAIN 11)208– 232 PKITH_ILTVT THYMIDINE KINASE INFECTIOUS LARYNGOTRACHEITIS 183–208– VIRUS (STRAIN THORNE V882) 202 234 PKITH_VZV4 THYMIDINE KINASEVARICELLA-ZOSTER VIRUS 197– (ACYCLOVIR-RESISTANT STRAIN 216 40A2)PKITH_VZV7 THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197–(ACYCLOVIR-RESISTANT STRAIN 216 7-1-3) PKITH_VZVD THYMIDINE KINASEVARICELLA-ZOSTER VIRUS 197– (STRAIN DUMAS) 216 PKITH_VZVG THYMIDINEKINASE VARICELLA-ZOSTER VIRUS 197– (ACYCLOVIR-RESISTANT STRAIN GK) 216PKITH_VZVW THYMIDINE KINASE VARICELLA-ZOSTER VIRUS (VZV) 197– 216PKKIT_FSVHZ KIT TYROSINE KINASE FELINE SARCOMA VIRUS (STRAIN 192– 276–TRANSFORMING PROTEIN HARDY-ZUCKERMAN 4) 214 297 PKRI5_HSVII GENE 15PROTEIN KINASE ICTALURID HERPESVIRUS 1 151– 358– 167 374 PKRI6_HSVIIGENE 16 PROTEIN KINASE ICTALURID HERPESVIRUS 1 197– 286– 217 311PKR1_HSVII SERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS (TYPE 280– 358–KINASE 1/STRAIN 17) 296 377 PKR1_HSV2 SERINE/THREONINE-PROTEIN HERPESSIMPLEX VIRUS (TYPE 2) 276– 358– KINASE 296 377 PKR1_HSVEBSERINE/THREONINE-PROTEIN EQUINE HERPESVIRUS TYPE 1 289– KINASE (STRAINAB4P) 307 PKR1_HSVEK SERINE/THREONINE-PROTEIN EQUINE HERPESVIRUS TYPE 1289– KINASE (STRAIN KENTUCKY A) 307 PKR1_VZVD SERINE/THREONINE-PROTEINVARICELLA-ZOSTER VIRUS (STRAIN 179– KINASE DUMAS) 197 PKR2_EBV PROBABLESERINE/ EPSTEIN-BARR VIRUS (STRAIN 196– 313– THREONINE-PROTEIN KINASEB95-8) 211 338 PKR2_HSVII PROBABLE SERINE/ HERPES SIMPLEX VIRUS (TYPE247– THREONINE-PROTEIN KINASE 1/STRAIN 17) 267 PKR2_HSVEB PROBABLESERINE/ EQUINE HERPESVIRUS TYPE 1 317– 441– THREONINE-PROTEIN KINASE(STRAIN AB4P) 339 462 PKR2_PRVN3 SERINE/THREONINE-PROTEIN PSEUDORABIESVIRUS (STRAIN 164– 282– KINASE 2 NIA-3) 185 305 PKR2_VZVD PROBABLESERINE/ VARICELLA-ZOSTER VIRUS 116– 226– 354– THREONINE-PROTEIN KINASE(STRAIN DUMAS) 131 247 373 PKR73_HSV11 GENE 73 PROTEIN KINASE ICTALURIDHERPES VIRUS 1 841– 858 PKR74_HSV11 GENE 74 PROTEIN KINASE ICTALURTDHERPES VIRUS 1 359– 548– 380 575 PKRB1_VACCC 30 KD PROTEIN KINASEVACCINIA VIRUS (STRAIN 199– HOMOLOG COPENHAGEN) 214 PKRB1_VACCV 30 KDPROTEIN KINASE VACCINIA VIRUS (STRAIN WR) 199– HOMOLOG 214 PKRB1_VARV 30KD PROTEIN KINASE VARIOLA VIRUS 199– HOMOLOG 214 PKRF1_SFVKA POSSIBLEPROTEIN KINASE SHOPE FIBROMA VIRUS (STRAIN  83– C20 KASZA) 98PKRF1_VACCC POSSIBLE PROTBIN KINASE VACCINIA VIRUS (STRAIN  85– F10COPENHAGEN) 100 PKRF1_VACCP POSSIBLE PROTEIN KINASE VACCINIA VIRUS(STRAIN L-1VP)  52– F10 67 PKRF1_VARV POSSIBLE PROTEIN KINASE VARIOLAVIRUS  85– F10 100 PKROS_AVISU ROS TYR KINASE AVIAN SARCOMA VIRUS(STRAIN  6– 202– 284– TRANSFORMING PROTEIN UR2) 29 223 305 PKRYK_AVIR3TYR-PROTEIN KINASE AVIAN RETROVIRUS RPL30 154– 221– TRANSFORMING PROTEINR 172 241 PKSEA_AVIET TYR-PROTEIN KINASE AVIAN ERYTHROBLASTOSIS VIRUS158– TRANSFORMING PROTEIN SR (STRAIN S13) 177 PKSRC_AVIS2 TYR-PROTEINKINASE AVIAN SARCOMA VIRUS (STRAIN 361– TRANSFORMING PROTEIN SR PR2257)377 PKSRC_AVISR TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN 361–TRANSFORMING PROTEIN SR RASV1441) 377 PKSRC_AVISS TYR-PROTEIN KINASEAVIAN SARCOMA VIRUS (STRAIN S1) 361– TRANSFORMING PROTEIN SR 377PKSRC_AVIST TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN S2) 361–TRANSFORMING PROTEIN SR 377 PKSRC_RSVH1 TYR-PROTEIN KINASE ROUS SARCOMAVIRUS (STRAIN H- 361– TRANSFORMING PROTEIN SR 19) 377 PKSRC_RSVPTYR-PROTEIN KINASE ROUS SARCOMA VIRUS (STRAIN 361– TRANSFORMING PROTEINSR PRAGUE C) 377 PKSRC_RSVPA TYR-PROTEIN KINASE ROUS SARCOMA VIRUS(STRAIN 358– TRANSFORMING PROTEIN SR PA101T) 374 PKSRC_RSVSR TYR-PROTEINKINASE ROUS SARCOMA VIRUS (STRAIN 361– TRANSFORMING PROTEIN SRSCHMIDT-RUPP1N) 377 PKYES_AVISY TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS(STRAIN Y73 361– TRANSFORMING PROTEIN Y 377 PL100_ADE02 LATE 100 KDPROTEIN HUMAN ADENOVIRUS TYPE 2 489– 511 PL100_ADE05 LATE 100 KD PROTEINHUMAN ADENOVIRUS TYPE 5 489– 511 PL100_ADE4I LATE 100 KD PROTEIN HUMANADENOVIRUS TYPE 41 458– 480 PL52_ADE02 LATE L1 52 KD PROTEIN HUMANADENOVIRUS TYPE 2 237– 259 PL52_ADE05 LATE L1 52 KD PROTEIN HUMANADENOVIRUS TYPE 5 237– 259 PLEC1_FOWPM HEPATIC LECTIN HOMOLOG FOWLPOXVIRUS (ISOLATE HP-4)  2– (MUNICIH) 26 PLMP1_EBV LATENT MEMBRANE PROTEINEPSTEIN-BARR VIRUS (STRAIN  20–  79– 1 B95-8) 43 100 PLMP1_EBVC LATENTMEMBRANE PROTEIN EPSTEIN-BARR VIRUS (STRAIN  20–  79– 1 B95-8) 43 100PLMP1_EBVR LATENT MEMBRANE PROTEIN EPSTEIN-BARR VIRUS (STRAIN  20–  79–1 B95-8) 43 100 PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS(STRAIN 181– 204– 267–  291–  346–  390– B95-8) 196 226 288 315 369 410PMCEL_SFVKA MRNA CAPPING ENZYME, SHOPE FIBROMA VIRUS (STRAIN 244– 556–679– LARGE SUBUNIT KASZA) 260 571 699 PMCEL_VACCC MRNA CAPPING ENZYME,VACCINIA VIRUS (STRAIN  81– 265– 289–  687– LARGE SUBUNIT COPENHAGEN)102 282 312 707 PMCEL_VACCV MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAINWR)  81– 265– 289–  687– LARGE SUBUNIT 102 282 312 707 PMCEL_VARV MRNACAPPING ENZYME, VARIOLA VIRUS  81– 265– 289–  687– LARGE SUBUNIT 102 282312 707 PMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS 217–(STRAIN BA71V) 243 PMCE_REOVD MRNA CAPPING ENZYME REOVTIRUS (TYPE3/STRAIN 358– 567– 714– DEARING) 384 588 741 PMOVP_CGMVS MOVEMENTPROTEIN CUCUMBER GREEN MOTTLE MOSAIC 157– VIRUS (WATERMELON STRAIN S 172PMOVP_CGMVW MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE MOSAIC 157– VIRUS(WATERMELON STRAIN 172 PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUMRINGSPOT VIRUS  49– 178– 74 205 PMOVP_PPMVS MOVEMENT PROTEIN PEPPER MILDMOTTLE VIRUS  25– 186– (STRAIN SPAIN) 50 201 PMOVP_TMGMV MOVEMENTPROTEIN TOBACCO MILD GREEN MOSAIC 186– VIRUS (TMV STRAIN U2) 201PMOVP_TMVCO MOVEMENT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN  88– 156–COWPEA) 107 171 PMTC1_CHVN1 MODIFICATION METHYLASE CHLORELLA VIRUS NC-IA129– CV1B1 156 PMTC2_CHVP1 MODIFICATION METHYLASE PARAMECIUM BURSARIACHLORELLA  72– CV1A11 VIRUS 1 ( 94 PMTC3_CHVN1 MODIFICATION METHYLASECHLORELLA VIRUS NC-IA 177– 265– CV1B111 192 286 PMYBE_AVILEP135-GAG-MYB-ETS AVIAN LEUKEMIA VIRUS E26 104– TRANSFORMING PROTEIN (124 PMYB_AVIMB MYB TRANSFORMING PROTEIN AVIAN MYELOBLASTOSIS VIRUS 218–301– 238 326 PNCAP_AINOV NUCLEOCAPSID PROTEIN AINO VIRUS 159– 181PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE  84– 99PNCAP_BUNSH NUCLEOCAPSID PROTEIN BUNYA VIRUS SNOWSHOE HARE  84– 99PMCAP_CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS (STRAIN  31–ONDERSTEPOORT) 50 PNCAP_F1PV NUCLEOCAPSID PROTEIN FELINE INFECTIOUSPERITONITIS  57– VIRUS (STRAIN 79-1146) 74 PNCAP_HANTV NUCLEOCAPSIDPROTEIN HANTAAN VIRUS (STRAIN 76-118) 317– 342 PNCAP_HAZVI NUCLEOCAPSIDPROTEIN HAZARA VIRUS (ISOLATE JC280) 428– 446 PNCAP_IHNV NUCLEOCAPSIDPROTEIN INFECTIOUS HEMATOPOIETIC 110– 239– NECROSIS VIRUS (STRAIN ROUND137 265 BUT PNCAP_INSV NUCLEOCAPSID PROTEIN IMPATIENS NECROTIC SPOTVIRUS 155– 179 PNCAP_MEASE NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN 40– EDMONSTON) 59 PNCAP_MEASH NUCLEOCAPSID PROTEIN MEASLES VIRUS(STRAIN HALLE)  40– 59 PNCAP_MEASY NUCLEOCAPSID PROTEIN MEASLES VIRUS(STRAIN  40– YAMAGATA-1) 59 PNCAP_MUMP1 NUCLEOCAPSID PROTEIN MUMPS VIRUS(STRAIN SDL-1) 156– 178 PNCAP_MUMPM NUCLEOCAPSID PROTEIN MUMPS VIRUS(STRAIN MIYAHARA 156– VACCINE) 178 PNCAP_PHV NUCLEOCAPSID PROTEINPROSPECT HILL VIRUS  36– 218– 256–  321– 58 236 277 346 PNCAP_P11HCNUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS  42–  86– (STRAIN C39)58 102 PNCAP_P11HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS  42– 86– (STRAIN WASHINGTON/1957) 58 102 PNCAP_P13B NUCLEOCAPSID PROTEINBOVINE PARAINFLUENZA 3 VIRUS 163– 184 PNCAP_P13H4 NUCLEOCAPSID PROTEINHUMAN PARAINFLUENZA 3 VIRUS 163– (STRAIN NIH 47885) 184 PNCAP_PUUMHNUCLEOCAPSID PROTEIN PUUMALA VIRUS  36– 321– (STRAIN HALLNAS B1) 58 346PNCAP_PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS  36– 218– 321– (STRAINSOTKAMO) 58 236 346 PNCAP_RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS 299–(STRAIN AVOI) 322 PNCAP_RABVP NUCLEOCAPSID PROTEIN RABIES VIRUS 299–(STRAIN PV) 322 PNCAP_RABVS NUCLEOCAPSID PROTEIN RABIES VIRUS 299–(STRAIN SAD B19) 322 PNCAP_RVFVZ NUCLEOCAPSID PROTEIN RIFT VALLEY FEVERVIRUS 158– (STRAIN 2H-548 M12) 180 PNCAP_SEND5 NUCLEOCAPSID PROTEINSENDAI VIRUS  29–  86– (STRAIN Z/HOST MUTANTS) 51 102 PNCAP_SENDENUCLEOCAPSID PROTEIN SENDAI VIRUS  42–  86– (STRAIN ENDERS) 58 102PNCAP_SENDH NUCLEOCAPSID PROTEIN SENDAI VIRUS  42–  86– (STRAIN HARRIS)58 102 PNCAP_SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS  29–  86– (STRAINZ) 51 102 PNCAP_SEOUS NUCLEOCAPSID PROTEIN SEOUL VIRUS 112– 317– (STRAINSR-11) 138 342 PNCAP_SFSV NUCLEOCAPSID PROTEIN SANDFLY FEVER SICILIANVIRUS 156– 181 PNCAP_TACV NUCLEOCAPSID PROTEIN TACARIBE VIRUS 219– 241PNCAP_UUX NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS 167– 189 PNCAP_VHSV0NUCLEOCAPSID PROTEIN VTAAL HEMORRHAG1C SEPTICEMIA 240– VIRUS (STRAIN07-71) 266 PNCAP_VHSVM NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA240– VIRUS (STRAIN MAKAH) 266 PNCAP_VSVJO NUCLEOCAPSID PROTEIN VESICULARSTOMATITIS VIRUS  64– (SEROTYPE NEW JERSEY/STRAIN OG 80 PNCAP_VSVS1PNEF_HV2RO NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS 110– TYPE 2(ISOLATE ROD) 129 PNEF_HV2ST NEGATIVE FACTOR HUMAN IMMUNODEFICIENCYVIRUS 106– TYPE 2 (ISOLATE ST) 128 PNRAM_1ABDA NEURAMINIDASE INFLUENZA AVIRUS  3– (STRAIN A/BLACK DUCK/AUSTRALIA/ 29 702/78) PNRAM_1ACH1NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAIN A/CHILE/1/83) 24 PNRAM_1ADA1NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAIN A/DUCK/ALBERTA/28/76) 24PNRAM_1ADGE NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAINA/DUCK/GERMANY/49) 29 PNRAM_1AFPW NEURAMINIDASE INFLUENZA A VIRUS  3–301– (STRAIN A/FOWL PLAGUE VIRUS/ 29 317 WEYBRIDGE) PNRAM_1AHCONEURAMINIDASE INFLUENZA A VIRUS 299– (STRAIN A/EQUINE/COR/16/74) 315PNRAM_1AHX1 NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAINA/EQUINE/KENTUCKY/1/81) 29 PNRAM_1AKIE NEURAMTNIDASE INFLUENZA A VIRUS 3– (STRAIN A/KIEV/59/79) 24 PNRAM_1ALEN NEURAMINIDASE INFLUENZA A VIRUS 3– (STRAIN A/LENINGRAD/54/1) 24 PNRAM_1AMEI NEURAMINIDASE INFLUENZA AVIRUS  3– (STRAIN A/MEMPHIS/1/771H- 30 A/BELLAMY/42N) PNRAM_1APARNEURAMINIDASE INFLUENZA A VIRUS  3– (STRAIN A/PARROT/ULSTER/73) 30PNRAM_1APUE NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAIN A/PUERTORICO/8/34) 30 PNRAM_1ARUE NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAINA/RUDDY TURNSTONE/NEW 29 JERSQY/60/ PNRAM_1ASH2 NEURAMINIDASE INFLUENZAA VIRUS  3– (STRAIN A/SHEARWATER/AUSTRALIA/ 29 72) PNRAM_1ATKRNEURAMINIDASE INFLUENZA A VIRUS  3–  56– (STRAIN A/TURKEY/OREGON/71) 2477 PNRAM_1ATRA NEURAMINIDASE INFLUENZA A VIRUS  3– (STRAINA/TERN/AUSTRALIA/G70C/ 29 75) PNRAM_1AUSS NEURAMINIDASE INFLUENZA AVIRUS  3– (STRAIN A/USSR/90/77) 24 PNRAM_1AWHM NEURAMINIDASE INFLUENZA AVIRUS  3– (STRAIN A/WHALE/MAINE/1/84) 29 PNRAM_1AWIL NEURAMINIDASEINFLUENZA A VIRUS  3– (STRAIN A/WILSON-SMITH/33) 30 PNRAM_JNBBENEURAMINIDASE INFLUENZA B VIRUS  3– (STRAIN B/BEIJING/1/87) 20PNRAM_INBHK NEURAMINIDASE INFLUENZA B VIRUS  3– (STRAIN B/HONGKONG/8/73) 20 PNRAM_INBLE NEURAMINIDASE INFLUENZA B VIRUS  3– (STRAINB/LEE/40) 20 PNRAM_INBLN NEURAMINIDASE INFLUENZA B VIRUS  3– (STRAINB/LENINGRAD/179/86) 20 PNRAM_INBMD NEURAMINIDASE INFLUENZA B VIRUS  3–(STRAIN B/MARYLAND/59) 20 PNRAM_INBMF NEURAMINIDASE INFLUENZA B VIRUS 3– (STRAIN B/MEMPHIS/3/89) 20 PNRAM_INBOR NEURAMINIDASE INFLUENZA BVIRUS  3– (STRAIN B/OREGON/5/80) 20 PNRAM_INBS1 NEURAMINIDASE INFLUENZAB VIRUS  3– (STRAIN B/SINGAPORE/222/79) 20 PNRAM_INBUS NEURAMINIDASEINFLUENZA B VIRUS  3– (STRAIN B/USSR/100/83) 20 PNRAM_INBV1NEURAMINIDASE INFLUENZA B VIRUS  3– (STRAIN B/VICTORIA/3/85) 20PNS1_SIDE V PROBABLE NONSTRUCTURAL BOMBYX DENSONUCLEOSIS VIRUS 135–PROTEIN PRECURSO 151 PNS2_SIDE V PROBABLE STRUCTURAL BOMBYXDENSONUCLEOSIS VIRUS  2– 196– 783– PROTEIN PRECURSOR 26 221 806PNS3_SIDE V PROBABLE NONSTRUCTURAL BOMBYX DENSONUCLEOSIS VIRUS  60–PROTEIN PRECURSO 78 PNSS_TSWVB NON-STRUCTURAL PEOTEIN TOMATO SPOTTEDWILT VIRUS  80– 431– (BRAZILIAN ISOLATE CPNH1/BR-01) 105 455 PNSS_TSWVLNON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS  80– 436– (STRAIN L3)105 451 PNTP1_VACCC NUCLEOSIDE VACCINIA VIRUS (STRAIN  20– 387–TRIPHOSPHATASE 1 COPENHAGEN) 45 403 PNTPI_VACCV NUCLEOSIDE VACCINIAVIRUS (STRAIN WR)  20– 387– TRIPHOSPHATASE 1 45 403 PNTP1_VARVNUCLEOSIDE VARIOLA VIRUS 293– TRIPHOSPHATASE 1 309 PP100_HSV6U MAJORANTIGENIC HERPES SIMPLEX VIRUS (TYPE 182– 250– 344– STRUCTURAL PROTEIN6/STRAIN UGANDA-1102) 204 270 366 PPAP2_FOWPV POLY(A) POLYMERASE FOWLPOXVIRUS  79– REGULATORY SUBUNIT 100 PPAP2_MYXVA POLY(A) POLYMERASE MYXOMAVIRUS (ISOLATE 101– REGULATORY SUBUNIT AUST/UR1ARRAA/VERG-86/1) 116PPAP2_VACCC POLY(A) POLYMERASE VACCINIA VIRUS (STRAIN 101– REGULATORYSUBUNIT COPENHAGEN) 116 PPAP2_VACCV POLY(A) POLYMERASE VACCINIA VIRUS(STRAIN WR) 101– REGULATORY SUBUNIT 116 PPAP2_VARV POLY(A) POLYMERASEVARIOLA VIRUS 101– REGULATORY SUBUNIT 116 PPCNA_NPVAC PROLIFERATING CELLAUTOGRAPHA CALIFORNICA NUCLEAR  67– 227– NUCLEAR ANTIGEN POLYHEDROSISVIRUS 89 244 PE21_NPVOP 21 2 KD PROTEIN IN PE 5 ORGY1A PSEUDOTSUGATA117– REGION MULTICAPSID POLYHEDROSIS VIRUS 139 PPE25_NPVAC 25 1 KDPROTEIN IN PE- AUTOGRAPHA CALIFORNIA NUCLEAR  57– P26 INTERGENIC REGIONPOLYHEDROSIS VIRUS 83 PPE38_NPVAC MAJOR IMMEDIATE EARLY AUTOGRAPHACALIFORNIA NUCLEAR  17– PROTEIN POLYHEDROSIS VIRUS 33 PPEN3_ADE02 PENTONPROTEIN HUMAN ADENOVIRUS TYPE 2 171– 195 PPEN3_ADE05 PENTON PROTEINHUMAN ADENOVIRUS TYPE 5 171– 195 PPEN3_ADEGX PENTON PROTEIN AVIANADENOVIRUS GAL10 (STRAIN 194– 307– SA2) 214 324 PPIV2_ADE07 MATURATIONPROTEIN HUMAN ADENOVIRUS TYPE 7 412– 431 PPIV2_ADEM1 MATURATION PROTEINMOUSE ADENOVIRUS TYPE 1  409–  428 PPOL1_BAYMG GENOME POLYPROTEIN 1BARLEY YELLOW MOSAIC VIRUS 739– 835– 1072–  1889– (GERMAN ISOLATE) 755856 1094 1910 PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAICVIRUS 739– 835– 1072–  1465– 1888– (JAPANESE STRAIN 11-1) 755 856 10941485 1909 PPOL1_GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME 691–1040–  1116–  MOSAIC VIRUS 717 1062 1143 PPOL1_GFLV RNA1 POLYPROTEINGRAPEVINE FANLEAF VIRUS 380– 477– 545– 1079– 1149– 1341– 1761– 1821–2020– 396 503 564 1098 1171 1356 1785 1848 2044 PPOL1_TBRVS RNA1POLYPROTEIN TOMATO BLACK PING VIRUS 1132–  (STRAIN S) 1159 PPOL2_ARMVRNA2 POLYPROTEIN ARABIS MOSAIC VIRUS 129– 243– 346– 150 266 367PPOL2_BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 325– 463–(GERMAN ISOLATE) 350 485 PPOL2_BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOWMOSAIC VIRUS 325– 463– (JAPANESE STRAIN 11-1) 350 485 PPOL2_GFLV RNA2POLYPROTEIN GRAPEVINE FANLEAF VIRUS 808– 1021–  829 1045 PPOL2_TBRVSRNA2 POLYPROTEIN TOMATO BLACK RING VIRUS 425– 541– 856– 1203– (STRAIN S)446 557 876 1223 PPOL2_TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS(ISOLATE 316– 427– 1527–  RASPBERRY) 340 448 1554 PPOLG_BOVEV GENOMEPOLYPROTEIN BOVINE ENTEROVIRUS 1833–  (STRAIN VG-5-27) 1859 PPOLG_BVDVNGENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 627– 943– 1119–  1282–1363– 1868– 2460– 2608– 2883– (ISOLATE NADL) 653 965 1134 1297 1387 18922487 2628 2898 3141–  3220–  3856–  3967– 3161 3241 3871 3986PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 627– 943–1119–  1138– 1189– 1282– 1363– 1778– 2370– (STRAIN SD-1) 653 965 11341163 1205 1297 1387 1802 2397 2518–  2741–  2793–  3766– 2538 2766 28083781 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAIN COE) 850–867 PPOLG_COXA3 GENOME POLYPROTEIN COXSACKIEVIRUS A23 (ECHO 9  67–VIRUS) 92 PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN1491–  1601–  GRIGGS) 1517 1626 PPOLG_COXB1 GENOME POLYPROTEINCOXSACKIEVIRUS B1 1472–  1582–  1498 1607 PPOLG_COXB3 GENOME POLYPROTEINCOXSACKIEVIRUS B3 228– 1475–  1585–  255 1501 1610 PPOLG_COXB4 GENOMEPOLYPROTEIN COXSACKIEVIRUS B4 821– 1473–  1583–  846 1499 1608PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 1475–  1585–  1501 1610PPOLG_DEN1SS GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 918– 1111– 1211–  1243– 1612– 2222– 2348– 2401– 3050– SINGAPORE S275/90) 943 11381236 1260 1628 2248 2365 2426 3069 PPOLG_DEN1W GENOME POLYPROTEIN DENGUEVIRUS TYPE 1 (STRAIN 919– 1112–  WESTERN PACIFIC) 944 1139 PPOLG_DENIWGENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE 336– MALAYSIA M3) 354PPOLG_DEN23 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 848– 919–1112–  1244– 1283– 1613– 2293– 2347– 2405– 166B1) 868 944 1139 1261 13011629 2318 2364 2425 2700–  2726 PPOLG_DEN26 GENOME POLYPROTEIN DENGUEVIRUS TYPE 2 (STRAIN 848– 919– 1112–  1244– 1283– 1376– 1613– 2293–2347– 16681-PDK53) 868 944 1139 1261 1301 1396 1629 2318 2364 2405– 2700–  2425 2726 PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2(STRAIN 848– 919– D2-04) 868 944 PPOLG_DEN2J GENOME POLYPROTEIN DENGUEVIRUS TYPE 2 (STRAIN 848– 919– 1112–  1244– 1176– 1611– 2201– 2447–2405– JAMAICA) 868 944 1139 1261 1196 1629 2318 2864 2425 2700–  2720PPOLG_DEN2N GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 100–  71–364– NEW GUINEA C) 120 196 391 PPOLG_DEN2P GENOME POLYPROTEIN DENGUEVIRUS TYPE 2 (STRAIN 919– 112– 1244–  1283– 1376– 1613– 2290– 2344–2402– PR159/S1) 944 1139 1261 1301 1396 1629 2315 2361 2422 2697–  2723PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 639– 832–964– 1201– TONGA 1974) 664 859 981 1219 PPOIG_DEN3 GENOME POLYPROTEINDENGUE VIRUS TYPE 3 917– 1210–  1242–  1174– 1611– 2141– 2124– 2146–2199– 942 1228 1289 1194 1627 2162 2247 2160 2424 2098–  1018–  27241067 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 1209–  1241– 1611–  2220– 2342– 2400– 3045– 1227 1258 1627 2246 2359 2420 3064PPOLG_ECIIG GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY 664– 774–690 799 PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 225–558– 1194–  1650– 247 578 1215 1667 PPOLG_EMCVB GENOME POLYPROTEINENCEPHALOMYOCARDITIS VIRUS 560– 1120–  1196–  (STRAIN EMC-DNONDIABETOGENE 580 1141 1217 PPOLG_EMCVD GENOME POLYPROTCINENCEPHALOMYOCARDITIS VIRUS 560– 1120–  1196–  (STRAIN EMC-D DIABETOGENE580 1141 1217 PPOLG_ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARPITIS560– VIRUS (STRAIN 37A) 580 PPOLG_ENMGO GENOME POLYPROTEIN MENOOENCEPHALOMYOCARDITIS 493– VIRUS 513 PPOLG_FMDV1 GENOME POLYPROTEINFOOT-AND-MOUTH DISEASE VIRUS 121– 984– 1036–  1396– 1465– 1764– (STRAINA10-61) 141 1003 1057 1411 1487 1791 PPOLG_FMDV5 GENOME POLYPROTEINFOOT-AND-MOUTH DISEASE VIRUS 162– (STRAIN A5) 187 PPOLG_FMDVA GENOMEPOLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 121– 984– 1036–  1396– 1465–1763– (STRAIN A12) 140 1003 1057 1411 1487 1790 PPOLG_FMDVO GENOMEPOLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 121– 984– 1036–  1396– 1465–1763– (STRAINS O1K AND ANDO1BFS) 141 1003 1057 1411 1487 1790PPOLG_FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 301– (STRAINC1-SANTA PAU [C-S8]) 320 PPOLG_FMDVT GENOME POLYPROTEIN FOOT-AND-MOUTHDISEASE VIRUS 121– 979– (STRAIN C1) 141 998 PPOLG_HCVI GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 112– 143– 619–  683–  833–2327– 2442– 2837– 133 169 640 699 857 2347 2457 2859 PPOLG_HCVA GENOMEPOLYPROTEIN HOG CHOLERA VIRUS 102– 1143–  1282–  1778– 2370– 2518– 3131–3737– 3767– (STRAIN ALFORT) 128 1163 1301 1802 2397 2538 3152 3753 37823877–  3893 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS 102– 1143– 1282–  1778– 2370– 2518– 3131– 3737– 3767– (STRAIN BRESCIA) 128 11631301 1802 2397 2538 3152 3753 3782 3877–  3893 PPOLG_HCVBK GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 112– 143– 619–  683– 2327–2441– 2836– 2988– 133 169 640 699 2347 2456 2858 3007 PPOLG_HCVEI GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE ECI)  27– 53 PPOLG_HCVH GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 112– 143– 619–  683–  833– 863– 2442– 2837– 133 169 640 699 853 880 2457 2859 PPOLG_HCVH4 GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV- 112– 143– 476) 133 169PPOLG_HCVH7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE  15– HCT27) 41PPOLG_HCVH8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE  27– HCT18) 53PPOLG_HCVHK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 112– 143–HCV-KF) 133 169 PPOLG_HCVJ2 GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE 112– 143– HC-J2) 133 169 PPOLG_HCVJ5 GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE 112– 143– 623–  687– HC-J5) 133 169 644 703PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 112– 143– 623– 687–  837– 1827– 2327– 2859– 3011– HC-J6) 133 169 644 703 861 1853 23472881 3030 PPOLG_HCVJ7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 143–623– 687– HC-J7) 169 644 703 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE 112– 143– 687–  837–  867– 1172– 1827– 2859– 3011– HC-J8)133 169 703 861 884 1188 1853 2881 3030 PPOLG_HCVJA GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE 112– 143– 619–  683–  833–  863– 2327– 2836–2988– JAPANESE) 133 169 640 699 857 880 2347 2858 3007 PPOLG_HCVJTGENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 112– 143– 619–  683–  833–2327– 2441– 2836– HC-JT) 133 169 640 699 857 2347 2456 2858 PPOLG_HCVTHGENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE TH)  27– 53 PPOLG_HCVTWGENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 112– 143– 619–  683–  833–2327– 2441– 2836– 2988– TAIWAN) 133 169 640 699 857 2347 2456 2858 3007PPOLO_HPAV1 GENOME POLYPROTEIN HEPATITIS A VIRUS 303– (STRAIN LCDC-1)323 PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS 401– 799– 1195– 1687– 2008– 2068– (STRAIN 24A) 428 819 1210 1708 2033 2092 PPOLG_HPAV4GENOME POLYPROTEIN HEPATITIS A VIRUS 799– 1195–  1687–  2008– 2068–(STRAIN 43C 819 1210 1708 2033 2092 PPOLG_HPAV8 GENOME POLYPROTEINHEPATITIS A VIRUS 799– 1195–  1687–  2008– 2068– (STRAIN 18F) 819 12101708 2033 2092 PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS 799–(STRAIN CR326) 819 PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS 778–(STRAIN GA76) 798 PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAW HM- 799– 1195–  1688–  2009– 2069– 175) 819 1210 1709 2034 2093PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS 799– 1195–  1688– 2009– 2069– (STRAIN LA) 819 1210 1709 2034 2093 PPOLG_HPAVM GENOMEPOLYPROTEIN HEPATITIS A VIRUS 799– 1195–  1688–  2009– 2069– (STRAINMBB) 819 1210 1709 2034 2093 PPOLG_HPAVS GENOME POLYPROTEIN SIMIANHEPATITIS A VIRUS 1199–  1690–  2012–  2072– (STRAIN AGM-27) 1214 17112037 2096 PPOLG_HRV14 GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 (HRV-141383–  1962–  1406 1982 PPOLG_HRV1A GENOME POLYPROTEIN HUMAN RHINOVTRUS1A (HRV-1A) 361– 547– 379 562 PPOLG_HRV1B GENOME POLYPROTEIN HUMANRHTNOVIRUS 1B (HRV-1B) 386– 572– 859– 1029– 1453– 1625– 1816– 1941– 404587 876 1052 1478 1641 1842 1961 PPOLG_HRV2 GENOME POLYPROTEIN HUMANRHINOVIRUS 2 (HRV-2) 569– 694– 1022–  1446– 1618– 1809– 1843– 584 7131045 1469 1634 1835 1866 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS89 (HRV-89) 576– 1038–  1229–  1332– 1460– 1632– 1823– 1948– 591 10611253 1358 1485 1648 1849 1968 PPOLG_HUBV7 GENOME POLYPROTEIN HUMANENTEROVIRUS 70 (STRAIN 1492–  J670/71) 1515 PPOLG_IBDVO STRUCTURALPOLYPROTEIN AVIAN INFECTIOUS BURSAL 905– DISEASE VIRUS (STRAIN O11) 922PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938– 1306– 1642–  2245– 2326– 2462– (STRAIN SA-14) 963 1325 I6S8 2170 2351 2481PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938– 1306– 1642–  2245– 2326– 2462– (STRAIN SA(V)) 963 1325 1658 2270 2351 2481PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938– 1306– 1642–  2245– 2326– 2462– (STRAIN JAOARS982) 963 1325 1658 2270 2351 2481PPOLG_JAEVN GENOME POIYPROTEIN JAPANESE ENCEPHALITIS VIRUS 866– 1234– (STRAIN NAKAYAMA) 891 1251 PPOLG_KUNJM GENOME POLYPROTEIN KUNIIN VIRUS561– 935– 1307–  1643– 2246– 2327– 2440– 2463– 2641– (STRAIN MRM61C) 576960 1326 1659 2271 2352 2460 2483 2658 2798–  2814 PPOLG_LANVT GENOMEPOLYPROTEIN LANGAT VIRUS  67– 527– 736–  835– 1157– 1519– 1630– 2158–2210– (STRAIN TP21) 89 551 756 862 1178 1544 1653 2182 2257 2366– 2424–  2766–  2387 2451 2784 PPOLG_LANVY GENOME POLYPROTEIN LANGAT VIRUS 67– 527– (STRAIN YELANTSEV) 89 551 PPOLG_LIV GENOME POLYPROTEIN LOUPINGILL VIRUS (LI)  67– 527– 835– 89 551 862 PPOLG_LIVSB GENOME POLYPROTEINLOUPING ILL VIRUS 247– (STRAIN SB 526) 271 PPOLG_MCfA GENOME POLYPROTEINMOSQUITO CELL FUSING AGENT 120– 1174–  1402–  1788– 1872– 2012– 2810–(CFA FLAVIVIRUS) 137 1199 1428 1805 1887 2029 2827 PPOLG_MDMV GENOMEPOLYTROTEIN MAIZE DWARF MOSAIC VIRUS  39– 56 PPOLG_MVEV GENOMEPOLYPROTEIN MURRAY VALLEY ENCEPHALITIS 331– 563– 937– 1305– 1523– 1585–1641– VIRUS 347 578 962 1024 1548 1602 1657 PPOLG_OMV GENOME POLYPROTEINORNITHOGALUM MOSAIC VIRUS  90– 111– 678–  898– 110 126 696 914PPOLG_PEMVC GENOME POLYTROTEIN PEPPER MOTTLE VIRUS 690– 826– 1009– 1301– 1455– 1484– 1676– 1921– 2002– (CALIFORNIA ISOLATE) 717 846 10341348 1482 1500 1697 1945 2022 PPOLG_POL1M GENOME POLYPROTEIN POLIOVIRUSTYPE 1 (STRAIN 1409–  MAHONEY) 1432 PPOLG_POL1S GENOME POLYTROTEINPOLIOVTRUS TYPE 1 (STRAIN 1410–  SABIN) 1433 PPOLG_POU2L GENOMEPOLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN 1408–  LANSING) 1431 PPOLG_POU2WGENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2) 1408–  1431PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 577– 1407– 23127) 594 1430 PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3(STRAINS 577– 1407–  P3/LEON/37 AND P3/LEON 594 1430 12A[1]B) PPOLO_PPVDGENOME POLYPROTEIN PLUM POX POTYVIRUS 153–  55I– 714– 1098– 1468– 1497–2606– 3084– (STRAIN D) 178 571 741 1115 1495 1513 2624 3106 PPOLG_PPVEAGENOME POLYPROTEIN PLUM POX POTYVIRUS 981– 1461–  (STRAIN EL AMAR) 9991483 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATE 153–713– 1097–  1467– 1496– 2605– 3068– NAT) 178 740 1114 1494 1512 26233090 PPOLG_PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS 153– 713– 1097– 1467– 1496– 2605– 3083– (STRAIN RANKOVIC) 178 740 1114 1494 1512 26233105 PPOLG_PRSVH GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 272– (STRAINP/MUTANT HA) 290 PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA PINGSPOT VIRUS163– (STRAIN P/MUTANT HA 5-1) 181 PPOLG_PRSVW GENOME POLYPROTEIN PAPAYARINGSPOT VIRUS 163– (STRAIN W) 181 PPOLG_PSBMV GENOME POLYPROTEIN PEASEED-BORNE MOSAIC VIRUS  47– 251– 339–  654–  981– 1411– 1565– 2708–(STRAIN DPD1) 62 268 357 674 1001 1428 1592 2726 PPOLG_PVYC GENOMEPOLYPROTEIN POTATO VIRUS Y (STRAIN C) 755– 776 PPOLG_PVYHU GENOMEPOLYPROTEIN POTATO VIRUS Y (STRAIN 755– 964– 1010–  1109– 1456– 1485–1677– 1922– 2588– HUNGARIAN) 776 982 1036 1125 1483 1501 1698 1946 26063004–  3026 PPOLG_PVYN GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN N) 755–964– 1010–  1109– 1456– 1485– 1677– 1922– 2590– 776 982 1036 1125 14831501 1698 1946 2608 PPOLG_PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAINO) 755– 776 PPOLG_PYFVI GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS592– 1326–  1626–  1903– 2621– 2702– 2766– (ISOLATE P-121) 616 1353 16511924 2642 2729 2783 PPOLG_STEVM GENOME POLYTROTEIN ST LOUIS ENCEPHALITISVIRUS 1301–  (STRAIN MS1-7) 1324 PPOLG_SUMVS GENOME POLYPROTEINSUGARCANE MOSAIC VIRUS  39– (STRAIN SC) 56 PPOLG_SVDVH GENOMEPOLYPROTEIN SWINE VESICULAR DISEASE VIRUS 1475–  1585–  (STRAIN H/3 76)1501 1610 PPOLG_SVDVU GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS1475–  1585–  (STRAIN UKG/27/72) 1501 1610 PPOLG_TBEVS GENOMEPOLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS  67– 527– 1363–  1519– 1630–1740– 2230– 2366– 2765– (STRAIN SOFJIN) 89 551 1378 1544 1653 1761 22572387 2783 PPOLG_TBEVW GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 67– 527– 835– 1519– 1630– 2230– 2366– 2766– (WESTERN SUBTYPE) 89 551862 1544 1653 2257 2387 2784 PPOLG_TEV GENOME POLYPROTEIN TOBACCO ETCHVIRUS (TEV 827– 953– 1016–  1114– 1307– 1490– 853 980 1042 1130 13241506 PPOLG_TMEVB GENOME POLYPROTEIN THEILER'S MURINE 924– 1074–  1119– 1520– 1658– ENCEPHALOMYELITIS VIRUS 941 1095 1140 1546 1677 (STRAIN BEAN8386) PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE 1072–  1117– 1518–  1656– ENCEPHALOMYELITIS VIRUS 1093 1138 1544 1675 (STRAIN DA)PPOLG_TMEVG GENOME POLYPROTEIN THEILER'S MURINE 645– 924– 1074–  1119–1520– 1658– ENCEPHALOMYELITIS VIRUS 670 941 1095 1140 1546 1677 (STRAINGDV11) PPOLG_TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS  23– 970–1138–  1573– 39 991 1156 1595 PPOLG_TVMV GENOME POLYPROTEIN TOBACCO VEINMOTTLING VIRUS 404– 497– 660–  850–  967– 1257– 2537– 428 517 687 866992 1274 2562 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II198– 218 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS 557– 931– 1303– 1639– 2240– 2324– 2437– 2638– 2795– 572 956 1322 1655 2267 2349 24572655 2811 PPOLG_YEFV1 GENOMB POLYPROTEIN YELLOW FEVER VIRUS  74– 1157– 1228–  1385– 1495– 1625– 1761– 2229– (STRAIN 17D) 95 1179 1248 1405 15111641 1778 2254 PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS  74–1157–  1228–  1385– 1495– 1625– 1761– 2229– (STRAIN PASTEUR 17D-204) 951179 1248 1405 1511 1641 1778 2254 PPOLG_YEFV8 GENOME POLYPROTEIN YELLOWFEVER VIRUS  74– (STRAIN 1899/81) 95 PPOLH_POLIM GENOME POLYPROTEINPOLIOVIRUS TYPE 1 (STRAIN 1410–  MAHONEY) 1433 PPOLN_EEVVT NONSTRUCUTRALVENEZUELAN EQUINE ENCEPHALITIS  90– 235– 613– 1001– 1153– 1923– 2129–2201– POLYPROTEIN VIRUS (STRAIN TRINIDAD DON 107 254 634 1018 1178 19392144 2221 PPOLN_FCVC6 NON-STRUCTURAL FELINE CALICIVIRUS 443– 748– 902–1069– POLYPROTEIN (STRAIN CFI/68 FIV) 469 766 923 1088 PPOLN_FCVF4NON-STRUCTURAL FELINE CALICIVIRUS 300– POLYPROTEIN (STRAIN JAPANESE F4)326 PPOLN_FCVF9 NON-STRUCTURAL FELINE CALICIVIRUS 171– 262– 919– 1224–1378– 1545– POLYPROTEIN (STRAIN F9) 186 283 945 1242 1399 1564PPOLN_HEVBU NON-STRUCTURAL HEPATITIS E VIRUS  250– 1274–  POLYPROTEIN(STRAIN BURMA) 266 1291 PPOLN_HEVME NON-STRUCTURAL HEPATITIS E VIRUS250– 1272–  POLYPROTEIN (STRAIN MEXICO) 266 1289 PPOLN_HEVMYNON-STRUCTURAL HEPATITIS E VIRUS 250– 1274–  POLYPROTEIN (STRAINMYANMAR) 266 1291 PPOLN_HEVPA NON-STRUCTURAL HEPATITIS E VIRUS ((TRAINSPAKISTAN) 249– 1273–  POLYPROTEIN 265 1290 PPOLN_MIDDV NONSTRUCTURALMIDDLEBURG VIRUS 488– 628– 700– POLYPROTEIN 512 643 720 PPOLN_ONNVGNONSTRUCTURAL ONYONO-NYONG VIRUS  90– 613– 2141–  2220– POLYPROTEIN(STRAIN GULU) 107 634 2163 2240 PPOLN_RHDV NON-STRUCTURAL RABBITHEMORRHAGIC DISEASE VIRUS 156– 270– 299–  479– 1330– 1429– POLYPROTEIN180 292 320 5O2 1353 1455 PPOLN_RHDV3 NON-STRUCTURAL RABBIT HEMORRHAGICDISEASE VIRUS 115– POLYPROTEIN (STRAIN V351) 135 PPOLN_RRVNNONSTRUCTURAL ROSS RIVER VIRUS  89– 611– 2113–  2185– POLYPROTEIN(STRAIN NB5092) 106 632 2128 2205 PPOLN_RRVT NONSTRUCTURAL ROSS RIVERVIRUS 782– 854– POLYPROTEIN (STRAIN T48) 797 874 PPOLN_RUBVTNONSTRUCTURAL RUBELLA VIRUS  14–  97– 263–  670–  901– 1374– 2035–POLYPROTEIN (STRAIN THERIEN) 37 113 279 694 918 1393 2052 PPOLN_SFVNONSTRUCTURAL SEMLIKI FOREST VIRUS  91– 617– 2062–  2134– POLYPROTEIN108 643 2077 2154 PPOLN_SINDO NONSTRUCTURAL SINDBIS VIRUS (SUBTYPEOCKELBO/ 620– 1123–  1790–  2148– 2220– POLYPROTCIN STRAIN EDSBYNM2-5)646 1150 1814 3163 2240 PPOLN_SINDV NONSTRUCTURAL SINDBIS VIRUS (STRAINHRSP) 620– 1123–  1744–  1790– 2146– 2218– POLYPROTEIN 646 1150 17631812 2161 2238 PPOLR_EPMV RNA REPLICASE EGGPLANT MOSAIC VIRUS 808–POLYPROTEIN 833 PPOLR_OYMV RNA REPLICASE ONONIS YELLOW MOSAIC VIRUS 707–941– POLYPROTEIN 727 962 PPOLR_TYMV RNA REPLICASE TURNIP YELLOW MOSAICVIRUS 212– 436– 1173–  POLYPROTEIN 233 453 1192 PPOLR_TYMVA RNAREPLICASE TURNIP YELLOW MOSAIC VIRUS 212– 436– 1173–  POLYPROTEIN(AUSTRALIAN ISOLATE) 233 453 1192 PPOLR_TYMVC RNA REPLICASE TURNIPYELLOW MOSAIC VIRUS 212– 436– 1173–  POLYPROTEIN (ISOLATE TYMC) 233 4531192 PPOLS_EEEV STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS  35–213– 491– VIRUS 50 229 507 PPOLS_EEEV3 STRUCTURAL POLYPROTEIN EASTERNEQUINE ENCEPHALITIS  35– 214– 492– VIRUS 50 230 508 PPOLS_EEVV8STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS  32– 229– 504–VIRUS (STRAIN TC-83) 48 245 522 PPOLS_EEVVT STRUCTURAL POLYPROTEINVENEZUELAN EQUINE ENCEPHALITIS  32– 229– 504– VIRUS (STRAIN TRINIDAD DON48 245 522 PPOLS_IBDV5 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL900– DISEASE VIRUS (STRAIN 52/70) 922 PPOLS_IBDVA STRUCTURAL POLYPROTEINAVIAN INFECTIOUS BURSAL 900– DISEASE VIRUS (STRAIN 922 AUSTRALIAN OCPPOLS_IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900– DISEASEVIRUS (STRAIN CU-I) 922 PPOLS_IBDVP STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL 881– DISEASE VIRUS (STRAIN PHG-98) 903 PPOLS_IBDVSSTRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900– DISEASE VIRUS(STRAIN STC) 922 PPOLS_ONNVG STRUCTURAL POLYPROTEIN ONYONG-NYONG VIRUS688– (STRAIN GULU) 708 PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVERVIRUS 1216–  (STRAIN T48) 1243 PPOLS_RUBVH STRUCTURAL POLYPROTEINRUBELLA VIRUS (VACCINE STRAIN 281– HPV77) 302 PPOLS_RUBVM STRUCTURALPOLYPROTEIN RUBELLA VIRUS (STRAIN M33) 280– 301 PPOLS_RUBVR STRUCTURALPOLYPROTEIN RUBELLA VIRUS (VACCINE STRAIN 281– RA27/3 302 PPOLS_RUBVTSTRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN THERIEN 281– 1041–  3021060 PPOLS_SFV STRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS  35– 751–780– 59 772 801 PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS(SUBTYPE OCKELBO/  33– STRAIN EDSDYN 82-5) 52 PPOLS_SINDV STRUCTURALPOLYPROTEIN SINDBIS VIRUS  33– (STRAINS HRSP AND HRLP) 52 PPOLS_WEEVSTRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS  36– 909– VIRUS 51933 PPOL_AVIRE POL POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS 283– VIRUS303 PPOL_BAEVM POL POLYPROTEIN BABOON ENDOGENOUS VIRUS 526– 973– 999–1070– (STRAIN M7) 544 993 1019 1091 PPOL_BIV06 POL POLYPROTEIN BOVINEIMMUNODEFICIENCY VIRUS 101– 742– 868– (ISOLATE 106) 119 768 889PPOL_BIV27 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 101– 742– 868–(ISOLATE 127) 119 768 889 PPOL_BLVAU POL POLYPROTEIN BOVINE LEUKEMIAVIRUS 487– (AUSTRALIAN ISOLATE) 504 PPOL_BLVI POL POLYPROTEIN (REVERSEBOVINE LEUKEMIA VIRUS 487– TRANSCRIPTASE (JAPANESE ISOLATE BLV-1) 504PPOL_CAEVC POL POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS 393– 656–VIRUS (STRAIN CORK) 419 671 PPOL_CAMVC ENZYMATIC POLYPROTEIN CAULIFLOWERMOSAIC VIRUS 184– 380– 471– (STRAIN CM-1841) 204 407 494 PPOL_CAMVDENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 175– 375– 466– (STRAIND/H) 199 402 489 PPOL_CAMVE ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAICVIRUS 184– 380– 471– (STRAIN BBC) 204 407 494 PPOL_CAMVN ENZYMATICPOLYPROTEIN CAULIFLOWER MOSAIC VIRUS  70– 185– 381–  472– (STRAINNY8153) 97 205 408 495 PPOL_CAMVS ENZYMATIC POLYPROTEIN CAULIFLOWERMOSAIC VIRUS 184– 380– 471– (STRAIN STRASBOURG) 204 407 494 PPOL_CERVENZYMATIC POLYPROTEIN CARNATION ETCHED RING VIRUS 161– 455– 186 478PPOL_COYMV PUTATIVE POLYTROTEIN COMMELINA YELLOW MOTTLE VIRUS 320–1286–  1606–  1641– 343 1311 1622 1665 PPOL_EIAV9 POL POLYPROTEIN EQUINEINFECTIOUS ANEMIA VIRUS 437– (CLONE 1369) 456 PPOL_EIAVC POL POLYPROTEINEQUINE INFECTIOUS ANEMIA VIRUS 437– (CLONE CL22) 456 PPOL_EIAVY POLPOLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 436– (ISOLATE WYOMING) 455PPOL_FENVI POL POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 383– 856– 401876 PPOL_FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 407– 755–(ISOLATE PETALUMA) 426 775 PPOL_FIVSD POL POLYPROTEIN FELINEIMMUNODEFICIENCY VIRUS 407– 755– (ISOLATE SAN DIEGO) 426 775 PPOL_FIVT2POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 406– 665– 755– 1041–(ISOLATE TM2) 425 690 775 1060 PPOL_FMVD ENZYMATIC POLYPROTEIN FIGWORTMOSAIC VIRUS 191– 464– (STRAIN DXS) 212 487 PPOL_FOAMV POL POLYPROTEINHUMAN SPUMARETRO VIRUS 126– 768– 147 788 PPOL_GALV POL POLYPROTEINGIBBON APE LEUKEMIA VIRUS  59– 971– 1048–  80 991 1071 PPOL_HTLIA POLPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 330– TYPE 1 (STRAIN ATK) 346PPOL_HTLIC POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 330– TYPE 1(CAKIlmllAN ISOLATE) 346 PPOL_HTLV2 POL POLYPROTEIN HUMAN T-CELLLEUKEMIA VIRUS 609– TYPE II 627 PPOL_HV1A2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 860– TYPE 1 (ARV2/SF2 ISOLATE) 887 PPOL_HV1B1 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 635– 872– TYPE 1 (BH10 ISOLATE)660 899 PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 872–TYPE 1 (BH5 ISOLATE) 899 PPOL_HV1BR POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 872– TYPE 1 (BRU ISOLATE) 899 PPOL_HV1EL POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 622– 859– TYPE 1 (ELI ISOLATE)647 886 PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 860–TYPE 1 (HXB2 ISOLATE) 887 PPOL_HV1JR POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 864– TYPE 1 (JRCSF ISOLATE) 891 PPOL_HVIMA POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 859– TYPE 1 (MAL ISOLATE) 886PPOL_HVIMN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 863– TYPE 1 (MNISOLATE) 890 PPOL_HVIN5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS623– 860– TYPE 1 (NEW YORK-5 ISOLATE) 648 887 PPOL_HVIND POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS 622– 859– TYPE 1 (NDK ISOLATE) 647 886PPOL_HVIOY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 860– TYPE 1 (OYIISOLATE) 887 PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS635– 872– TYPE 1 (PV22 ISOLATE) 660 899 PPOL_HVIRH POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 859– TYPE 1 (RF/HAT ISOLATE) 886 PPOL_HVIU4 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 859– TYPE 1 (STRAIN UGANDAN/ISO886 PPOL_HVIZ2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 622– 859–TYPE 1 (Z2/CDC-Z34 ISOLATE) 647 886 PPOL_HVIZ6 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS  5– TYPE 1 (ZAIRE 6 ISOLATE) 32 PPOL_HV2BE POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 379– 907– TYPE 2 (ISOLATE BEN)406 934 PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 886–TYPE 2 (ISOLATE CAM2) 913 PPOL_HV2D1 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 397– 925– TYPE 2 (ISOLATE D194) 424 952PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 907– TYPE 2(ISOLATE D205.7) 934 PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 359– 887– TYPE 2 (ISOLATE GHANA-1) 386 914 PPOL_HV2NZ POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 543– 771– 887– TYPE 2 (ISOLATENIH-Z) 564 792 914 PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS 888– TYPE 2 (ISOLATE ROD) 915 PPOL_HV2SB POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS 359– 887– TYPE 2 (ISOLATE SBLISY) 386 907PPOL_HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 379– 907– TYPE 2(ISOLATE ST) 406 934 PPOL_IPHA PUTATIVE POL POLYPROTEIN HAMSTERINTRACISTERNAL A- 166– 198– 460– PARTICLE 190 225 477 PPOL_IPMA PUTATIVEPOL POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE 183– 209– 506–  531– 769– 201 236 523 552 789 PPOL_IPMAI PROBABLE POL POLYPROTEIN MOUSEINTRACISTERNAL A-PARTICLE 102– 128– 407–  425– 120 155 423 442 PPOL_JSRVPOL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS 186– 507– 660– VIRUS(JAAGSIEKTE SHEEP RET 213 526 679 PPOL_MCFF3 POL POLYPROTEIN MINK CELLFOCUS-FORMING MURINE  37– LEUKEMIA VIRUS (ISOLATE CI- 53 PPOL_MLVAK POLPOLYPROTEIN AXR MURINE LEUKEMIA VIRUS 651– 728– 671 744 PPOL_MLVAV POLPOLYPROTEIN AKV MURINE LEUKEMIA VIRUS 335– 978– 1004–  1081– 354 9981024 1097 PPOL_MLVCB POL POLYPROTEIN CAS-BR-E MURINE LEUKEMIA VIRUS  64– 90– 167– 84 110 183 PPOL_MLVF5 POL POLYPROTEIN FRIEND MURINE LEUXEMIAVIRUS 340– 983– 1009–  1086– (ISOLATE 57) 359 1003 1029 1102 PPOL_MLVFFPOL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 340– 983– 1009–  1086–(ISOLATE FB29) 359 1003 1029 1102 PPOL_MLVFP POL POLYPROTEIN FRIENDMURINE LEUKEMIA VIRUS 340– 983– 1009–  1086– (ISOLATE PVC-211) 359 10031029 1102 PPOL_MLVMO POL POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 335–978– 354 998 PPOL_MLVRD POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS335– 978– 1004–  1081– 354 998 1024 1097 PPOL_MLVRK POL POLYPROTEINRADIATION MURINE LEUKEMIA VIRUS 363– 389– 466– (STRAIN KAPLAN) 383 409482 PPOL_MMTVB POL POLYPROTEtN MOUSE MAMMARY TUMOR VIRUS 196– 731–(STRAIN BR6) 219 751 PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS743– 763 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS 369– 469– 632–1045– (STRAIN SA-OMVV) 395 488 647 1063 PPOL_RSVP POL POLYPROTEIN ROUSSARCOMA VIRUS 719– (STRAIN PRAGUE C) 742 PPOL_RTBV POLYPROTEIN RICETUNGRO BACILLIFORM VIRUS 891– 1058–  (RTBV) 915 1083 PPOL_RTBVPPOLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 891– 1058–  (ISOLATEPHILIPPINES) 915 1083 PPOL_SFV1 POL POLYPROTEIN SIMIAN FOAMY VIRUS(TYPE 1) 188– 335– 845–  976– 204 356 869 996 PPOL_SFV3L POL POLYPROTEINSIMIAN FOAMY VIRUS (TYPE 3/ 186– 337– 847–  978– STRAIN LK3) 206 358 871998 PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 895–(AGM155 ISOLATE) 915 PPOL_SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 711– 900– (AGM3 ISOLATE) 726 920 PPOL_SIVAI POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 899– (ISOLATE AGM/CLONE GRI-1) 926 PPOL_SIVAT POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 726– 915– (TYO-I ISOLATE) 741935 PPOL_SIVCZ POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY 884– VIRUS911 PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 680– 869–(ISOLATE GB1) 695 896 PPOL_SIVMI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 380– 908– (MM142-83 ISOLATE) 407 935 PPOL_SIVMK POL POLYPROTEINSIMIAN IMMUNODEFICIENCY VIRUS 380– 712– 906– (K6W ISOLATE) 407 737 933PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 343– 871–(F236/SMH4 ISOLATE) 370 898 PPOL_SIVSP POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 346– 874– (PB3/BC13 ISOLATE) 373 901 PPOL_SMRVHPOL POLYPROTEIN SQUIRREL MONKEY RETROVIRUS 748– 768 PPOL_SMSAV POLPOLYPROTEIN SIMIAN SARCOMA VIRUS 100– 177– 120 200 PPOL_SOCMV ENZYMATICPOLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 131– 155 PPOL_SRVI POLPOLYPROTEIN SIMIAN RETROVIRUS 743– 763 PPOL_VILV POL POLYPROTEIN VISNALENTIVIRUS 488– 651– 971– (STRAIN 1514) 507 666 991 PPOL_VILV1 POLPOLYPROTEIN VISNA LENTIVIRUS 488– 651– 971– (STRAIN 1514/CLONE LVI-IKS1)507 666 991 PPOL_V7LV2 POL POLYPROTEIN VISNA LENTIVIRUS 488– 651– 971–(STRAIN 1514/CLONE LVI-IKS2) 507 666 991 PPP15_HCMVA LARGE STRUCTURALHUMAN CYTOMEGALOVIRUS  153– 183– PHOSPHOPROTEIN PP150 (STRAIN AD169) 171210 PPP28_HCMVA 28 KD STRUCTURAL HUMAN CYTOMEGALOVIRUS  116–PHOSPHOPROTEIN (STRAIN AD169) 141 PPP41_H5V6G PHOSPHOPROTEIN P41 HERPESSIMPLEX VIRUS (TYPE 6/  158– 396– STRAIN GS) 175 411 PPP65_HCMVA 65 KDLOWER MATRIX HUMAN CYTOMEGALOVIRUS 311– PHOSPHOPROTEIN (STRAIN AD169)333 PPP65_HCMVT 64 KD LOWER MATRIX HUMAN CYTOMEGALOVIRUS 301–PHOSPHOPROTEIN (STRAIN TOWNE) 323 PPP71_HCMVA 71 KD UPPER MATRIX HUMANCYTOMEGALOVIRUS  79– PHOSPHOPROTEIN (STRAIN A0I69) 102 PPR73_MMTVBPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS  40– (STRAIN BR6) 61 PPR73_MMTVGPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS  40– (STRAIN GR) 61 PPR7L_MMTVGPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS  44– (STRAIN GR) 65 PPR7R_MMTVGPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS  40– (STRAIN GR) 61 PRASH_MSVHATRANSFORMING PROTEINS HARVEY MURINE SARCOMA VIRUS  49– P21 AND P29 73PRASH_RRASV TRANSFORMING PROTEINS RASHEED RAT SARCOMA VIRUS  56– P21 ANDP29 80 PREEP_CSV REPEAT ELEMENT PROTEIN CAMPOLETIS SONORENSIS VIRUS  14–36 PREFR_VACCV RIFAMPICIN RESISTANCE VACCINIA VIRUS (STRAIN WR), 274–316– 517– PROTEIN AND (STRAIN COPENHAGEN) 298 335 535 PREFR_VARVRIFAMPICIN RESISTANCE VARIOLA VIRUS 274– 316– 517– PROTEIN 298 335 535PREV_SIVAG REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  2– (AGM3 ISOLATE)17 PREV_SIVGB REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  45– (ISOLATEGBI) 72 PRIR1_ASFM2 RIBONUCLEOSIDE- AFRICAN SWINE FEVER VIRUS 139– 189–495– DIPHOSPHATE REDUCTASE (ISOLATE MALAWI LIL 20/1) 164 210 510PRIR1_EBV R1BONUCLEOTIDE REDUCTASE EPSTEIN-BARR VIRUS 793– (STRAINB95-8) 812 PRIR1_I HCMVA RIBONUCLEOTIDE REDUCTASE HUMAN CYTOMEGALOVIRUS192– 669– (STRAIN AD169) 212 684 PRIR1_HSVI1 RIBONUCLEOTIDE REDUCTASEHERPES SIMPLEX VIRUS (TYPE 1/ 415– 587– STRAIN 17) 430 613 PRIR1_HSVEBRIBONUCLEOTIDE REDUCTASE EQUINE HERPES VIRUS TYPE 1  60– 266– 668–(STRAIN AB4P) 85 288 694 PRIR1_HSVSA RIBONUCLEOTIDE REDUCTASEHERPESVIRUS SAIMIRI (STRAIN 11) 136– 151 PRIR1_VACCC RIBONUCLEOTIDEREDUCTASE VACCINIA VIRUS (STRAIN  36– COPENHAGEN) 51 PRIR1_VACCVRIBONUCLEOTIDE REDUCTASE VACCINIA VIRUS (STRAIN WR)  36– 51 PRIR1_VARVRIBONUCLEOTIDE REDUCTASE VARIOLA VIRUS  36– 51 PRIR1_VZVD RIBONUCLEOTIDEREDUCTASE VARICELLA-ZOSTER VIRUS  34– 221– 258– (STRAIN DUMAS) 58 247280 PRIR2_EBV RTBONUCLEOTIDE REDUCTASE EPSTEIN-BARR VIRUS 209– (STRAINB95-8) 236 PRIR2_HSVI1 RIBONUCLEOTIDE REDUCTASE HERPES SIMPLEX VIRUS(TYPE 1/  44– 275– STRAIN 17) 66 292 PRIR2_HSVIK RIBONUCLEOTIDEREDUCTASE HERPES SIMPLEX VIRUS (TYPE 1/  43– 245– 274– STRAIN KOS) 65261 291 PRIR2_HSV23 RIBONUCLEOTIDE REDUCTASE HERPES SIMPLEX VIRUS (TYPE2/  41– 272– STRAIN 333) 63 289 PRIR2_HSVB3 RIBONUCLEOTIDE REDUCTASEBOVINE HERPESVIRUS TYPE 1 244– (STRAIN 34) 266 PRIR2_HSVEBRIBONUCLEOTIDE REDUCTASE EQUINE HERPESVIRUS TYPE 1  61– 251– (STRAINAB4P) 88 273 PRIR2_HSVSA RIBONUCLEOTIDE REDUCTASE HERPESVIRUS SAIMIRI(STRAIN II) 212– 239 PRIR2_SFVKA RIBONUCLEOTIDE REDUCTASE SHOPE FIBROMAVIRUS 184– 215– (STRAIN KASZA) 206 237 PRIR2_VACCC RIBONUCLEOTIDEREDUCTASE VACCINIA VIRUS (STRAIN 184– COPENHAGEN) 206 PRIR2_VACCPRIBONUCLEOTIDE REDUCTASE VACCINIA VIRUS (STRAIN L-IVP 184– 206PRIR2_VACCV RIBONUCLEOTIDE REDUCTASE VACCINIA VIRUS (STRAIN WR) 184– 206PRIR2_VARV RIBONUCLEOTIDE REDUCTASE VARIOLA VIRUS 184– 215– 206 237PRIR2_VZVD RIBONUCLEOTIDE REDUCTASE VARICELLA-ZOSTER VIRUS 237– (STRAINDUMAS) 258 PRMIL_AVEVR RMIL SER/THR-PROTEIN AVIAN ROUS-ASSOCIATED VIRUS380– KINASE TRANSFORMING P TYPE 1 405 PRP94_VACCV RNA-POL-ASSOCIATEDVACCINIA VIRUS (STRAIN WR), 173– 265– 371–  561– TRANSCRIPTION SPEC FACTAND (STRAIN COPENHAGEN) 189 290 394 578 PRP94_VARV RNA-POL-ASSOCIATEDVARIOLA VIRUS 173– 265– 371–  561– TRANSCRIPTION SPEC FACT 189 290 394578 PRPO1_VACCC DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN  76– 304–848– 1005– 147 KD POLYPEPTIDE COPENHAGEN) 96 329 871 1032 PRPO1_VACCVDNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR)  76– 304– 848– POLYMERASE147 KD POLYPE 96 329 871 PRPO1_VARV DNA-DIRECTED RNA VARIOLA VIRUS  76–304– 848– 1005– POLYMERASE 147 KD POLYPE 96 329 871 1032 PRPO2_CAPVKDNA-DIRECTED RNA CAPRIPOXVIRUS (STRAIN KS-1)  12– 477– POLYMERASE 132 KDPOLYPE 29 498 PRPO2_COWPX DNA-DIRECTED RNA COWPOX VIRUS 150– 258– 480–POLYMERASE 132 KD POLYPE 170 274 505 PRPO2_VACCV DNA-DIRECTED RNAVACCINIA VIRUS (STRAIN WR), 150– 258– 480– POLYMERASE 132 KD POLYPE AND(STRAIN COPENHAGEN) 170 274 505 PRPO2_VARV DNA-DIRECTED RNA VARIOLAVIRUS 150– 258– 480– POLYMERASE 132 KD POLYPE 170 274 505 PRP04_VACCCDNA-DIRECTED RNA VACCINIA VIRUS (STRAIN  33– POLYMERASE 35 KD POLYPEPCOPENHAGEN) 48 PRPO4_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR) 33– POLYMERASE 35 KD POLYPEP 48 PRPO4_VARV DNA-DIRECTED RNA VARIOLAVIRUS  33– POLYMERASE 35 KD POLYPEP 55 PRPO6_VACCV DNA-DIRECTED RNAVACCINIA VIRUS (STRAIN WR),  38– POLYMERASE 19 KD POLYPEP AND (STRAINCOPENHAGEN) 59 PRP07_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR), 38– POLYMERASE 19 KD POLYPEP AND (STRAIN COPENHAGEN) 59 PRPO7_VARVDNA-DIRECTED RNA VARIOLA VIRUS  38– POLYMERASE 19 KD POLYPEP 59PRPO8_FOWP1 DNA-DIRECTED RNA FOWLPOX VIRUS  57– POLYMERASE 18 KD POLYPEP(STRAIN FP-1) 81 PRPOA_LELV RNA-DIRECTED RNA LELYSTAD VIRUS 175– 707–1164–  1233– 1513– 1531– 1955– 2320– 2802– POLYMERASE 197 729 1180 12581530 1546 1977 2443 2823 3133–  3156 PRPOL_EAV RNA-DIRECTED RNA EQUINEARTERITIS VIRUS  97– 602– 754–  825– 2530– 3041– POLYMERASE 118 617 774851 2553 3068 PRRP1_DHVII RNA-DIRECTED RNA DHORI VIRUS 247– 275– 337– 377–  569– POLYMERASE SUBUNIT P1 (STRAIN INDIAN/1313/61) 264 299 359394 591 PRRP1_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244–POLYMERASE SUBUNIT P1 A/ANN ARBOR/6/60) 262 PRRP1_IABEI RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/BEIJING/11/56)262 PRRP1_IADUN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244–POLYMERASE SUBUNIT P1 A/DUNEDIN/4/73) 262 PRRP1_IAGU2 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1A/GULL/MARYLAND/704/7J) 262 PRRP1_IAHLO RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/EQUINE/LONDON/1416/73) 262PRRP1_IAHTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASESUBUNIT P1 A/EQUINE/TENNESSEE/5/86) 262 PRRP1_IAKIE RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/KIEV/S9979) 262PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASESUBUNIT P1 A/XOREA/426/6B) 262 PRRP1_IALE1 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/LENINGRAD/134/57) 262PRRP1_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASESUBUNIT P1 A/LENINGRAD/134/17/57) 262 PRRP1_IALE3 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1A/LENINGRAD/134/47/57) 262 PRRP1_IAMAN RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/MALLARD/NEW YORK/6750/78) 262PRRP1_LAME8 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASESUBUNIT P1 A/MEMPHIS/8/88) 262 PRRP1_IANT6 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/NT/60/68) 262 PRRP1_IAPUERNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1A/PUERTO RICO/8/34) 262 PRRP1_IASIN RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 244– POLYMERASE SUBUNIT P1 A/SINGAPORE/1/57) 262 PRRP1_IATKMRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1A/TURKEY/MINNESOTA/833/80) 262 PRRP1_IAVI7 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 138– 244– POLYMERASE SUBUNIT P1 A/VICTORIA/3/75) 163 262PRRP1_IAW1L RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASESUBUNIT P1 A/WILSON-SMITH/33) 262 PRRP1_IAW1S RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1 A/WISCONSIN/3523/88) 262PRRP1_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244– POLYMERASESUBUNIT P1 A/SWINE/HONG KONG/126/82) 262 PRRP1_IAZON RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244– POLYMERASE SUBUNIT P1A/SWINE/ONTARIO/2/81) 262 PRRP1_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 244– POLYMERASE SUBUNIT P1 A/SWINE/TENNESSEE/26/77) 262PRRP1_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 205– POLYMERASESUBUNIT P1 B/ANN ARBOR/1/66 222 [COLD-ADAPTED]) PRRP1_INBAD RNA-DIRECTEDRNA INFLUENZA B VIRUS (STRAIN 205– POLYMERASE SUBUNIT P1 B/ANNARBOR/1/66 (WILD-TYPED 222 PRRP1_INBLE RNA-DIRECTED RNA INFLUENZA BVIRUS (STRAIN 205– POLYMERASE SUBUNIT P1 B/LEE/40) 222 PRRP1_INCJJRNA-DIRECTED RNA INFLUENZA C VIRUS 317– 564– POLYMERASE SUBUNIT P1(STRAIN C/JJ/50) 341 591 PRRP2_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 534– POLYMERASE SUBUNIT P2 A/ANN ARDOR/6/60) 557 PRRP2_IADH2RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASE SUBUNIT P2A/DUCK/HOKKAIDO/8/80) 557 PRRP2_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 534– POLYMERASE SUBUNIT P2 A/FOWL PLAGUE VIRUS/ROSTOCK/34) 557PRRP2_IAGU2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASESUBUNIT P2 A/GULL/MARYLAND/704/77) 557 PRRP2_IAHLO RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 534– POLYMERASE SUBUNIT P2A/EQUINE/LONDON/1416/73) 557 PRRP2_IALE1 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 534– POLYMERASE SUBUNIT P2 A/LENINGRAD/134/57) 557PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASESUBUNIT P2 A/LENINGRAD/134/17/57) 557 PRRP2_IAP10 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 534– POLYMERASE SUBUNIT P2A/PINTAIL/ALBERTA/119/79) 557 PRRP2_IAPUE RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 534– POLYMERASE SUBUNIT P2 A/PUERTO RICO/8/34) 557PRRP2_IARUD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASESUBUNIT P2 A/RUDDY TURNSTONE/NEW JERSEY/ 557 47/ PRRP2_IASINRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASE SUBUNIT P2A/SINGAPORE/1/57) 557 PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 554– POLYMERASE SUBUNIT P2 A/TURKEY/MINNESOTA/833/80) 557PRRP2_IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN  68– 534–POLYMERASE SUBUNIT P2 WILSON-SMITH/33) 86 557 PRRP2_IAZH2 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASE SUBUNIT P2 A/SWINE/HONGKONG/81/78) 557 PRRP2_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN534– POLYMERASE SUBUNIT P2 A/SWINE/HONG KONG/126/82) 557 PRRP2_IAZHRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534– POLYMERASE SUBUNIT P2A/SWINE/IOWA/15/30) 557 PRRP2_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 530– POLYMERASE SUBUNIT P2 A/SWINE/TENNESSEE/26/77) 557PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN  32– POLYMERASESUBUNIT P2 D/ANN ARBOR/1/66 [COLD- 54 ADAPTED]) PRRP2_INBAD RNA-DIRECTEDRNA INFLUENZA B VIRUS (STRAIN  32– POLYMERASE SUBUNIT P2 B/ANNARDOR/1/66 [WILD- 54 TYPE]) PRRP2_INBSI RNA-DIRECTED RNA INFLUENZA BVIRUS (STRAIN  32– POLYMERASE SUBUNIT P2 B/SINGAPORE/222/79) 54PRRP2_INC33 RNA-DIRECTED RNA INFLUENZA C VIRUS 406– POLYMERASE SUBUNITP2 (STRAIN C/33/50) 425 PRRP3_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219– 542– POLYMERASE SUBUNIT P2 A/ANN ARBOR/6/60) 234 560PRRP3_IABUD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– POLYMERASESUBUNIT P3 A/BUDGERIGAR/KOKKAIDO/1/77) 234 PRRP3_IACHI RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/CHILE/1/83)234 500 PRRP3_1AFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542–POLYMERASE SUBUNIT P3 A/FOWL PLAGUE VIRUS/ROSTOCK/34) 234 567PRRP3_IAFPW RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542–POLYMERASE SUBUNIT P3 A/FOWL PLAGUE VIRUS/WEYBRIDGE) 234 560 PRRP3_IAGU2RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNITP3 A/GULL/MARYLAND/704/77) 234 560 PRRP3_IAGUA RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3A/GULL/ASTRAKHAN/227/84) 234 560 PRRP3_IAHX6 RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/EQUINE/KENTUCKY/2/86)234 560 PRRP3_IAKLO RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542–POLYMERASE SUBUNIT P3 A/EQUINE/LONDON/1416/73) 234 560 PRRP3_IAHPRRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNITP3 A/EQUINE/PRAGUE/1/56) 234 560 PRRP3_IAKIE RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 542– POLYMERASE SUBUNIT P3 A/KIEV/59/79) 560 PRRP3_IAKORRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNITP3 A/KOREA/426/68) 234 560 PRRP3_IALE1 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/LENINGRAD/134/57) 234560 PRRP3_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542–POLYMERASE SUBUNIT P3 A/LENINGRAD/134/17/57) 234 560 PRRP3_IALE3RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNITP3 A/LENINGRAD/134/47/57) 234 560 PRRP3_IAMAN RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/MALLARD/NEWYORK/6750/78) 234 560 PRRP3_IAME8 RNA-DIRECTED RNA 219– 542– POLYMERASESUBUNIT P3 234 560 PRRP3_IANT6 RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/NT/60/68) 234 560 PRRP3_IAPUERNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 469– 542– POLYMERASESUBUNIT P3 A/PUERTO RICO/8/34) 234 485 560 PRRP3_IARUD RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/RUDDYTURNSTONE/NEW JERSEY/ 234 560 47/ PRRP3_IASE2 RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3A/SEAL/MASSACHUSETTS/133/82) 234 560 PRRP3_IASIN RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3A/SINGAPORE/1/57) 234 560 PRRP3_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/TURKEY/MINNESOTA/833/80) 234560 PRRP3_IAVI7 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542–POLYMERASE SUBUNIT P3 A/VICTORIA/3/75) 234 560 PRRP3_IAWIL RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3A/WILSON-SMITH/33) 234 560 PRRP3_IAZI1 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 219– 542– POLYMERASE SUBUNIT P3 A/SWINE/IOWA/15/30) 234560 PRRP3_IAZTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219– 542–POLYMERASE SUBUNIT P3 A/SWINE/TENNESSEE/24/77) 234 560 PRRP3_INBACRNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN  71– 535– POLYMERASE SUBUNITP3 B/ANN ARDOR/1/66 [COLD- 86 561 ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNAINFLUENZA B VIRUS (STRAIN  71– 535– POLYMERASE SUBUNIT P3 B/ANNARBOR/1/66 [WILD- 86 561 TYPE]) PRRP3_INCBE RNA-DIRECTED RNA INFLUENZA CVIRUS (STRAIN  74– 552– POLYMERASE SUBUNIT P3 C/BERLIN/1/85) 96 571PRRP3_INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN  74– 552–POLYMERASE SUBUNIT P3 C/JJ/50) 96 571 PRRP3_THOGV RNA-DIRECTED RNATHOGOTO VIRUS  85– POLYMERASE SUBUNIT P3 101 PRRPA_CVH22 RNA-DIRECTEDRNA HUMAN CORONA VIRUS (STRAIN  82– 410– 858– 1482– 1523– 1543– 2125–2974– 3537– POLYMERASE 229E) 104 436 878 1507 1542 1568 2149 2992 3559PRRPA_CVMJD RNA-DIRECTED RNA MURINE HEPATITIS VIRUS 440– POLYMERASE(STRAIN DEFECTIVE JHM) 467 PRRPA_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV 917– 1188–  1338–  1422– 1461– 1567– 1783– 2165– 2337–POLYMERASE (STRAIN JHM) 938 1215 1354 1449 1480 1515 1806 2192 23542470–  2660–  2944–  3229– 3405– 3933– 2494 2676 2961 3255 3425 3954PRRPB_BEV RNA-DIRECTED RNA BERNE VIRUS 806– 1509–  1738–  2137–POLYMERASE 832 1527 1757 2154 PRRPB_CVMA5 RNA-DIRECTED RNA MURINECORONAVIRUS MHV 385– 1302–  1835–  2698– POLYMERASE (STRAIN A59) 4121324 1850 2723 PRRPB_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV 385–746– 1302–  1833– 2696– POLYMERASE (STRAIN JHM) 412 770 1324 1848 2721PRRPB_CVPF5 RNA-DIRECTED RNA PORCINE TRANSMISSIBLE 173– 482– POLYMERASEGASTROENTERITIS CORONAVIRUS 200 508 (STRAI PRRPB_CVPR8 RNA-DIRECTED RNAPORCINE RESPIRATORY CORONAVIRUS  80– POLYMERASE (STRAIN16/137004/BRITISH 1 106 PRRPB_IBVB RNA-DIRECTED RNA AVIAN INFECTIOUSBRONCHITIS 140– 338– 887– 1335– 1654– POLYMERASE VIRUS (STRAINBEAUDETTE) 164 365 911 1352 1674 PRRPL_BTV10 RNA-DIRECTED RNA BLUETONGUEVIRUS (SEROTYPE 10/  21– 146– POLYMERASE ISOLATE USA) 41 161 PRRPL_BUNYWRNA POLYMERASE BUNYAMWERA VIRUS  78– 303– 140– 1096– 1317– 1343– 1539–1869– 2001– 104 324 465 1116 1338 1363 1554 1886 2027 PRRPL_EBOVRNA-DIRECTED RNA EBOLA VIRUS  16– POLYMERASE 31 PRRPL_HANTV RNAPOLYMERASE HANTAAN VIRUS 151– 173– 596– 1561– 2081– (STRAIN 76-118) 168194 611 1585 2105 PRRPL_HRSV RNA POLYMERASE BETA HUMAN RESPIRATORYSYNCYTIAL  3– SUBUNIT VIRUS 19 PRRPL_HRSVA RNA POLYMERASE BETA HUMANRESPIRATORY SYNCYTIAL  3– 1181–  1425–  1633– 1929– 2018– SUBUNIT VIRUS(STRAIN A2) 19 1206 1447 1653 1948 2037 PRRPL_MABVM RNA-DIRECTED RNAMARBURG VIRUS (STRAIN MUSOKE)  15– 144– 223–  317–  471–  546–  931–1042– 1410– POLYMERASE 30 169 248 341 492 569 946 1067 1436 1711– 1990–  2071–  1731 2017 2094 PRRPL_MABVP RNA-DIRECTED RNA MARBURG VIRUS(STRAIN POPP)  15– 144– 223–  471–  546–  931– 1012– 1410– 1677–POLYMERASE 30 169 248 492 569 946 1067 1436 1696 1715– 1805–  1990– 2071– 2223– 1731 1832 2017 2094 2241 PRRPL_MEASE RNA POLYMERASE BETAMEASLES VIRUS (STRAIN 285– 617– 998– 1160– 1279– 1920– 2038– SUBUNITEDMONSTON) 312 632 1023 1185 1304 1940 2063 PRRPL_MUMPM RNA POLYMERASEBETA MUMPS VIRUS (STRAIN MIYAHARA  43– 110– 265–  962– 1100– 1132– 1601–2128– SUBUNIT VACCINE) 66 135 280 988 1124 1153 1622 2143 PRRPL_NDVB RNAPOLYMERASE BETA NEWCASTLE DISEASE VIRUS 704– 1571–  967– 2040– SUBUNIT(STRAIN BEAUDETTE C/45) 724 1592 1994 2067 PRRPL_PI2HT RNA POLYMERASEBETA HUMAN PARAINFLUENZA 2 VIRUS 109– 268– 308– 1309– 1562– 1985– 2215–SUBUNIT (STRAIN TOSHIBA) 124 291 334 1335 1588 2010 2234 PRRPL_PI3H4 RNAPOLYMERASE BETA HUMAN PARAINFLUENZA 3 VIRUS  172– 304– 844–  885– 1848–2068– 2111– SUBUNIT (STRAIN NIH 47885) 193 330 861 900 1868 2084 2134PRRPL_PUUMH RNA-DIRECTED RNA PUUMALA VIRUS (STRAIN HALLNAS  173– 596–1561–  1677– 2086– POLYMERASE B1) 194 611 1585 1696 2110 PRRPL_RABVP RNAPOLYMERASE BETA RABIES VIRUS (STRAIN PV) 266– 542– 741– 1446– 1492–SUBUNIT 286 563 762 1461 1517 PRRPL_RABVS RNA POLYMERASE BETA RABIESVIRUS (STRAIN SAD B19) 266– 542– 741– 1446– 1492– 1744– SUBUNIT 286 563762 1461 1517 1761 PRRPL_RDV RNA-DIRECTED RNA RICE DWARF VIRUS  10– 533–680– 1293– POLYMERASE 27 560 697 1336 PRRPL_RVFVZ RNA-DIRECTED RNA RIFTVALLEY FEVER VIRUS 582– 2009–  POLYMERASE (STRAIN ZH-548 M12) 609 2035PRRPL_SENDS RNA POLYMERASE BETA SENDAJ VIRUS  64– 104– 194–  844–  885–1405– 1844– 2107– SUBUNIT (STRAIN Z/HOST MUTANTS) 83 120 218 860 9001420 1864 2128 PRRPL_SENDE RNA POLYMERASE BETA SENDAI VIRUS (STRAINENDERS)  14– 664– 705– 1225– 1664– 1927– SUBUNIT 38 681 720 1240 16841948 PRRPL_SENDZ RNA POLYMERASE BETA SENDAI VIRUS (STRAIN Z)  64– 104–194–  844–  885– 1405– 1844– 2107– SUBUNIT 83 120 218 861 900 1420 18642128 PRRPL_SEOU8 RNA-DIRECTED RNA SEOUL VIRUS (STRAIN 80-39) 151– 173–394–  596– 1561– 2081– POLYMERASE 168 194 419 611 1585 2105 PRRPL_SV5WRRNA POLYMERASE BETA SIMIAN VIRUS 5 (STRAIN 21004-  43– 108– 263– 1094–1125– 1558– 2117– SUBUNIT WR) 66 124 289 1118 1147 1580 2137 PRRPL_SYNVRNA POLYMERASE BETA SONCHUS YELLOW NET VIRUS 126– 391– 605–  704–  863– 886– 1484– 1776– SUBUNIT 146 406 627 731 883 911 1510 1792 PRRPL_TSWVBRNA-DIRECTED RNA TOMATO SPOTTED WILT VIRUS 958– 1385–  1778–  2609–2678– POLYMERASE (BRAZILIAN ISOLATE CPNH1/BR-01) 974 1410 1800 2627 2702PRRPL_UUK RNA POLYMERASE UUKUNIEMI VIRUS 698– 923– 1404–  1570– 2060–714 948 1431 1591 2081 PRRPL_VSVJH RNA POLYMERASE BETA VESICULARSTOMATITIS VIRUS 156– 312– 903– 1956– 2080– SUBUNIT (SEROTYPE NEWJERSEY/STRAIN HA 183 339 928 1982 2097 PRRPL_VSVJO RNA POLYMERASE BETAVESICULAR STOMATITIS VIRUS 156– 312– 1956–  2080– SUBUNIT (SEROTYPE NEWJERSEY/STRAIN OC 183 339 1982 2101 PRRPL_VSVSJ RNA POLYMERASE BETAVESICULAR STOMATITIS VIRUS 1956–  SUBUNIT (STRAIN SAN JUAN) 1982PRRPO_ACLSV RNA-DIRECTED RNA APPLE CHLOROTIC LEAF SPOT VIRUS 226– 1036– 1132–  1775– POLYMERASE 247 1054 1155 1791 PRRPO_BWYVF PUTATIVERNA-DIRECTED BEET WESTERN YELLOWS VIRUS 299– RNA POL (ISOLATE FL-I) 326PRRPO_BYDVI PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 359– 391–505– RNA POL (ISOLATE MAV-PS 1) 386 416 532 PRRPO_BYDVP PUTATIVERNA-DIRECTED BARLEY YELLOW DWAW VIRUS 359– 391– 505– RNA POL (ISOLATEPAV) 386 416 532 PRRPO_BYDVR PUTATIVE RNA-DIRECTED BARLEY YELLOW DWAWVIRUS 359– 391– 505– RNA POL (ISOLATE P-PAV) 386 416 532 PRRPO_CARMVPROBABLE RNA-DIRECTED CARNATION MOTTLE VIRUS  4–  92– 327–  818– RNA POL30 107 350 833 PRRPO_CGMVS PUTATTVE RNA-DIRECTED CUCUMBER GREEN MOTTLEMOSAIC 443– 574– 1017–  1523– RNA POL VIRUS (WATERMELON STRAIN 466 5911032 1539 PRRPO_CNV PROBABLE RNA-DIRECTED CUCUMBER NECROSIS VIRUS 277–345– 470– RNA POL 300 371 494 PRRPO_CRV PROBABLE RNA-DIRECTED CYMBIDIUMRINGSPOT VIRUS  96– 345– 470– RNA POL 111 371 494 PRRPO_IPNVJ PUTATIVERNA-DIRECTED INFECTIOUS PANCREATIC NECROSIS 221– RNA POL VIRUS (SEROTYPEJASPER) 238 PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS  35–597– 659–  988– 1234– 1770– 2077– VIRUS (STRAIN ARMSTRONG) 52 613 6821008 1258 1795 2099 PRRPO_LYCVW RNA POLYMERASE LYMPHOCYTICCHORIOMENINGITIS  35– VIRUS (STRAIN WE) 52 PRRPO_MCMV PROBABLERNA-DIRECTED MAIZE CHLOROTIC MOTTLE VIRUS  16– 101– 573– RNA POL 41 127599 PRRPO_PEAMV RNA-DIRECTED RNA PEA ENATION MOSAIC VIRUS 144– 316– 431– 558– POLYMERASE 161 336 456 574 PRRPO_PLRVI PUTATIVE RNA-DIRECTEDPOTATO LEAFROLL VIRUS 331– 576– RNA POL (STRAIN 1) 358 600 PRRPO_PLRVWPUTATIVE RNA-DIRECTED POTATO LEAFROLL VIRUS 331– 576– RNA POL (STRAINWAGENINGEN) 358 600 PRRPO_PPMVS PUTATIVE RNA-DIRECTED PEPPER MILD MOTTLEVIRUS 375– 702– 1069–  1491– RNA POL (STRAIN SPAIN) 395 726 1096 1507PRRPO_RCNMV PUTATIVE RNA-DIRECTED RED CLOVER NECROTIC MOSAIC 278– RNAPOL VIRUS 300 PRRPO_REOVJ RNA-DIRECTED RNA REOVIRUS (TYPE 2/STRAIN 161–POLYMERASE D5/JONES) 176 PRRPO_REOVL RNA-DIRECTED RNA REOVIRUS (TYPE1/STRAIN LANG) 161– POLYMERASE 176 PRRPO_ROTBR RNA-DIRECTED RNA POLBOVINE ROTA VIRUS 132– 247– 844–  904–  942– 1027– SUBUNIT VP1 (STRAINRF) 156 269 861 921 967 1046 PRRPO_ROTBU RNA-DIRECTED RNA POL BOVINEROTA VIRUS 132– 247– 844–  904–  942– 1027– SUBUNIT VP1 (STRAIN UK) 156269 861 921 967 1046 PRRPO_ROTPC RNA-DIRECTED RNA POL PORCINE ROTA VIRUS(GROUP 198– 254– 318–  769–  856–  936– SUBUNTT VT1 C/STRAIN COWDEN) 223274 337 784 878 952 PRRPO_ROTPG RNA-DIRECTED RNA POL PORCINE ROTA VIRUS 32–  57– 132–  247–  844–  904–  942– 1027– SUBUNIT VP1 (STRAINGOTTFRIED) 53 72 156 269 861 921 967 1046 PRRPO_ROTSI RNA-DIRECTED RNAPOL SIMIAN II ROTA VIRUS 132– 247– 844–  904–  942– 1027– SUBUNIT VP1(STRAIN SA11) 156 269 861 921 967 1046 PRRPO_SBMV PROBABLE RNA-DIRECTEDSOUTHERN BEAN MOSAIC VIRUS  38– 122– 188–  287–  444–  625–  825– RNAPOL 64 143 206 302 466 643 846 PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 88– 369– 1281–  1676– 2019– 107 389 1301 1692 2046 PRRPO_TDSVC PUTATIVERNA-DIRECTED TOMATO BUSHY STUNT VIRUS 277– 345– 470– RNA POL (STRAINCHERRY) 300 371 494 PRRPO_TCV PUTATIVE RNA-DIRECTED TURNIP CRINKLE VIRUS 31– 241– RNA POL 58 263 PRRPO_TMGMV PUTATIVE RNA-DIRECTED TOBACCO MILDGREEN MOSAIC 209– 1085–  RNA POL VIRUS (TMV STRAIN U2) 231 1100PRRPO_TMV PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS (VULGAM) 700–1090–  1587–  RNA POL 724 1105 1610 PRRPO_TMVXR PUTATIVE RNA-DIRECTEDTOBACCO MOSAIC VIRUS 700– 1090–  1587–  RNA POL (STRAIN KOREAN) 724 11051610 PRRPO_TMVTO PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS 700– 1090– 1151–  1587– RNA POL (STRAIN TOMATO/L) 724 1105 1170 1610 PRRPO_TNVARNA-DIRECTED RNA TOBACCO NECROSIS VIRUS 113– POLYMERASE (STRAIN A) 135PRRPO_TNVD RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS  5– POLYMERASE(STRAIN I)) 26 PRRPP_CHAV RNA POLYMERASE ALPHA CHANDIPURA VIRUS 124–SUBUNIT (STRAIN 1653514) 146 PRRPP_MUMPI RNA POLYMERASE ALPHA MUMPSVIRUS (STRAIN SDL-1) 211– SUB UNIT 238 PRRPP_MUMPE RNA POLYMERASE ALPHAMUMPS VIRUS (STRAIN ENDERS) 212– SUBUNIT 239 PRRPP_MUMPM RNA POLYMERASEALPHA MUMPS VIRUS 212– SUBUNIT (STRAIN MIYAHARA VACCINE) 239 PRRPP_NDVARNA POLYMERASE ALPHA NEWCASTLE DISEASE VIRUS 256– SUBUNIT (STRAINAUSTRAUA-VICTORIA/32) 276 PRRPP_NTJVB RNA POLYMERASE ALPHA NEWCASTLEDISEASE VIRUS 256– SUBUNIT (STRAIN BEAUDETTE (745) 276 PRRPP_P12H RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216– SUBUNIT 243PRRPP_P12HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216–SUBUNIT (STRAIN TOSHIBA) 243 PRRPP_P14HA RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 4A VIRUS 220– SUBUNIT (STRAIN TOSHIBA) 247 PRRPP_P14KB RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 4B VIRUS 220– SUBUNIT (STRAIN68-333) 247 PRRPP_PIRYV RNA POLYMERASE ALPHA PIRY VIRUS 134– SUBUNIT 161PRRPP_RABVA RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN AVOI)  8– SUBUNIT32 PRRPP_RABVC RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN CVS-11)  8–SUBUNIT 32 PRRPP_RABVE RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN ERA),AND  8– 216– SUBUNIT (STRAIN PM) 32 237 PRRPP_RABVP RNA POLYMERASE ALPHARABIES VIRUS (STRAIN PV)  8– 216– SUBUNIT 32 237 PRRPP_RASVS RNAPOLYMERASE ALPHA RABIES VIRUS (STRAIN SAD B19)  8– 216– SUBUNIT 32 237PRRPP_SVS RNA POLYMERASE ALPHA SIMIAN VIRUS 5 (STRAIN W3) 199– 282–SUBUNIT 226 301 PRRPP_VSVJO RNA POLYMERASE ALPHA VESICULAR STOMATITISVIRUS 197– SUBUNIT (SEROTYPE NEW JERSEY/STRAIN OC 223 PS27R_ASFB7 S273RPROTEIN AFRICAN SWINE FEVER VIRUS 196– (STRAIN BA71V) 215 PSODC_VACCCSUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN  19– LIKE PROTEINCOPENHAGEN) 40 PSODC_VACCV SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAINWR)  19– LIKE PROTEIN 40 PSODC_VARV SUPEROXIDE DISMUTASE VARIOLA VIRUS 19– LIKE PROTEIN 40 PSPHR_AMEPV SPHEROIDIN AMSACTA MOOREIENTOMOPOXVIRUS  58– 627– 79 646 PSPHR_CBEPV SPHERIODS PRECURSORCHORISTONEURA BIENNIS 177– ENTOMOPOXVIRUS 201 PSPI1_MYXVL SERPIN 1MYXOMA VIRUS (STRAIN LAUSANNE)  62– 217– 80 243 PSWFA_SPVKA SWF8APROTEIN SWINEPOX VIRUS (STRAIN KASZA)  61– 83 PTALA_BFOV LARGE T ANTIGENBUDGERIGAR FLEDGLING DISEASE 354– VIRUS 369 PTALA_POVBA LARGE T ANTIGENPOLYOMA VIRUS BK (STRAIN AS) 202– 429– 224 444 PTALA_POVBK LARGE TANTIGEN POLYOMA VIRUS BK 202– 429– 224 444 PTALA_POVBO LARGE T ANTIGENBOVINE POLYOMAVIRUS 385– 400 PTALA_POVHA LARGE T ANTIGEN HAMSTERPOLYOMAVIRUS  43– 549– 69 564 PTALA_POVJC LARGE T ANTIGEN POLYOMAVIRUSJC 201– 428– 223 443 PTALA_POVLY LARGE T ANTIGEN LYMPHOTROPICPOLYOMAVIRUS  43– 516– 69 542 PTALA_POVM3 LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN 3) 576– 591 PTALA_POVMA LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN A2) 574– 589 PTALA_POVMC LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN 571– CRAWFORD SMALL-PLAQUE) 586 PTALA_POVMK LARGE TANTIGEN MOUSE POLYOMAVIRUS (STRAIN 173– 278– 446– KILHAM) 191 304 472PTALA_SV40 LARGE T ANTIGEN SIMIAN VIRUS 40 (SV40) 200– 427– 222 442PTAMI_POVHA MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS  43– 69 PTASM_POVHASMALL T ANTIGEN HAMSTER POLYOMAVIRUS  43– 69 PTASM_POVLY SMALL T ANTIGENLYMPHOTROPIC POLYOMAVIRUS  43– 69 PTASM_POVMK SMALL T ANTIGEN MOUSEPOLYOMAVIRUS  43–  67– (STRAIN KILHAM) 69 89 PTATR_NPVACTRANS-ACTIVATING TRANS AUTOGRAPHA CALIFORNICA NUCLEAR 406– REG PROTEINPOLYHEDROSIS VIRUS 431 PTATR_NPVBM TRANS-ACTIVATING TRANS BOMBYX MORINUCLEAR 411– REG PROTEIN POLYHEDROSIS VIRUS 436 PTATR_NPVOPTRANS-ACTIVATING TRANS ORGYIA PSEUDOTSUGATA 389– REG PROTEIN MULTICAPSIDPOLYHEDROSIS VIRUS 414 PTAT_BIVM TRANS-ACTIVATING TRANS BOVINEIMMUNODEFICIENCY VIRUS  44– REG PROTEIN (ISOLATE 106) 59 PTAT_BIV27TRANS-ACTIVATING TRANS BOVINE IMMUNODEFICIENCY VIRUS  44– REG PROTEIN(ISOLATE 127) 59 PTAT_HTLIA TRANS-ACTIVATING TRANS HUMAN T-CELL LEUKEMIAVIRUS 192– REG PROTEIN TYPE 1 (STRAIN ATK) 210 PTAT_HTLICTRANS-ACTIVATING TRANS HUMAN T-CELL LEUKEMIA VIRUS 192– REG PROTEIN TYPE1 (CARIBBEAN ISOLATE) 210 PTAT_HVIU4 TAT PROTEIN HUMAN IMMUNODEFICIENCYVIRUS  18– TYPE 1 (STRAIN UGANDAN/SO 43 PTCB_FLV T-CELL RECEPTOR BETAFELINE LEUKEMIA VIRUS  6–  98– CHAIN PRECURSOR 22 118 PTEGP_HSVEBPROBABLE TEGUMENT EQUINE HERPES VIRUS TYPE 1 101– PHOSPHOPROTEIN (STRAINAB4P) 118 PTEGP_HSVEK TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 101–(STRAIN KENTUCKY A) 118 PTEGU_EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARRVIRUS (STRAIN 143– 767– 814– 1052– 1194– 1469– 1869– 3061– 3102– D95-8)166 789 835 1075 1220 1496 1893 3077 3126 PTEGU_HCMVA PROBABLE LARGETEGUMENT HUMAN CYTOMEGALDMRUS (STRAIN 342– 644– 1061–   307– 1323– 1419–1509– 1957– 2199– PROTEIN AD169) 358 668 1077 322 1345 1446 1536 19742221 PTEGU_HSVII LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE  12–623– 1732–  1/STRAIN 17) 27 646 1759 PTEGU_HSV6G LARGE TEGUMENT PROTEINHERPES SIMPLEX VIRUS (TYPE 131– 345– 615– 1027– 1308– 1562– 6/STRAIN GS)152 365 636 1043 1328 1579 PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINEHERPESVIRUS TYPE 1 432– 559– 1072–  1107– 1618– 1764– 2263– (STRAINAB4P) 456 582 1099 1132 1640 1791 2285 PTEGU_HSVSA PROBABLE LARGETEGUMENT HERPESVIRUS SAIMIRI (STRAIN 11) 467– 714– 989– 1121– 1155–1177– 1503– 1607– 1898– PROTEIN 491 737 1008 1137 1174 1193 1525 16221915 2421–  2439 PTEGU_VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTERVIRUS 433– 494– 711–  801–  895– 1013– 1360– 1632– 1780– (STRAIN DUMAS)456 511 728 823 920 1034 1376 1657 1807 2008–  2270–  2694–  2029 22872711 PTERM_ADE02 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 2  63– 593–80 616 PTERM_ADE03 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 5  63–593– 80 616 PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 63– 580– 80 603 PTERM_ADE12 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE12  46– 334– 546– 63 350 569 PTOP2_ASFB7 DNA TOPOISOMERASE II AFRICANSWINE FEVER VIRUS 119– 686– (STRAIN BA71V) 146 707 PTOP2_ASFM2 DNATOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 119– 685– (ISOLATE MALAWI LIL20/1) 146 706 PTR14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS139– TRL14 (STRAIN AD169) 165 PTREL_AVIRE REL TRANSFORMING PROTEIN AVIANRETICULOENDOTHELIOSIS  56– VIRUS 74 PTYSY_VZVD THYMIDYLATE SYNTHASEVARICELLA-ZOSTER VIRUS  11– (STRAIN DUMAS) 29 PUI5R_H5V6U POSSIBLEGANCICLOVIR HERPES SIMPLEX VIRUS (TYPE 400– KINASE 6/STRAIN UGANDA-1102)415 PU2L_HSV6U PROTEIN 2L HERPES SIMPLEX VIRUS (TYPE  4– 6/STRAINUGANDA-1102) 27 PUDPE_NPVAC UDP-GLUCOSYLTRANSFERASE AUTOGRAPHACALIFORNIA NUCLEAR 452– PRECURSOR POLYHEDROSIS VIRUS 477 PUL02_HCMVAHYPOTHETICAL PROTEIN UL2 HUMAN CYTOMEGALOVIRUS  25– (STRAIN AD169) 49PUL05_HCMVA HYPOTHETICAL PROTEIN UL5 HUMAN CYTOMEGALOVIRUS  11– (STRAINAD169) 37 PUL06_EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS 253– (STRAINB95-B) 268 PUL06_HCMVA HYPOTHETICAL PROTEIN UL6 HUMAN CYTOMEOALOVIRUS191– (STRAIN AD169) 208 PUL06_HSVII VIRION PROTEIN UL6 HERPES SIMPLEXVIRUS (TYPE 404– 1/STRAIN 17) 429 PUL06_HSVEB VIRION GENE 56 PROTEINEQUINE HERPESVIRUS TYPE 1 437– (STRAIN AD4P) 461 PUL06_HSVSA VIRION GENE43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  44– 60 PUL07_EBV BBRF2PROTEIN EPSTEIN-BARR VIRUS 127– (STRAIN B95-8) 149 PUL07_HCMVAHYPOTHETICAL PROTEIN UL7 HUMAN CYTOMEGALOVIRUS  88– 186– (STRAIN AD169)108 209 PUL07_HSVII PROTEIN UL7 HERPES SIMPLEX VIRUS (TYPE 177– 1/STRAIN17) 200 PUL07_HSVEB GENE 55 PROTEIN EQUINE HERPESVIRUS TYPE 1  11–(STRAIN AB4P) 32 PUL07_HSVSA GENE 41 PROTEIN HERPESVIRUS SAIMIR1 (STRAIN11)  44– 61 PUL07_VZVD GENE 53 PROTEIN VARICELLA-ZOSTER VIRUS 158– 202–(STRAIN DUMAS) 176 224 PUL07_HSVII PROTEIN UL8 HERPES SIMPLEX VIRUS(TYPE 514– 705– 1/STRAIN 17) 538 726 PUL07_VZVD GENE 52 PROTEINVARICELLA-ZOSTER VIRUS 228– 593– (STRAIN DUMAS) 255 616 PUL09_HSVIIORIGIN OF REPLICATION HERPES SIMPLEX VIRUS (TYPE 564– BINDING PROTEIN1/STRAIN 17) 584 PUL09_HSVEB ORIGIN OF REPLICATION EQUINE HERPESVIRUSTYPE 1 171– 612– BINDING PROTEIN (STRAIN AB4P) 196 628 PUL09_VZVD ORIGINOF REPLICATION VARICELLA-ZOSTER VIRUS  68– 168– 484– BINDING PROTEIN(STRAIN DUMAS) 92 190 508 PUL11_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 223– UL11 (STRAIN AD169) 247 PUL13_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 449– UL13 (STRAIN AD169) 467 PUL14_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 280– UL14 (STRAIN AD169) 299PUL14_HSVII HYPOTHETICAL UL14 HERPES SIMPLEX VIRUS (TYPE  96– PROTEIN1/STRAIN 17) 116 PUL14_HSVEB HYPOTHETICAL GENE 48 EQUINE HERPESVIRUSTYPE 1 100– PROTEIN (STRAIN AB4P) 127 PUL16_HSVII PROTEIN ULI6 HERPESSIMPLEX VIRUS (TYPE  22– 1/STRAIN 17) 49 PUL16_HSVEB GENE 46 PROTEINEQUINE HERPESVIRUS TYPE 1  26–  98– 324– (STRAIN AB4P) 43 119 339PUL16_HSVSA GENE 33 PROTEIN HERPES VIRUS SAIMIRI (STRAIN  69– 278– 11)87 295 PUL16_VZVD GENE 44 PROTEIN VARICELLA-ZOSTER VIRUS  65– 317–(STRAIN DUMAS) 80 332 PUL17_EBV PROTEIN BGLFI EPSTEIN-BARR VIRUS 373–(STRAIN B95-8) 393 PUL17_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS  60– UL17 (STRAIN AD169) 82 PUL17_HSVII PROTEIN UL17HERPES SIMPLEX VIRUS (TYPE 156– 1/STRAIN 17) 181 PUL17_HSVSA GENE 32PROTEIN HERPESVIRUS SAIMIRI (STRAIN II)  94– 348– 118 370 PUL19_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  61– UL19 (STRAIN AD169) 85PUL20_PRVNJ UL20 MEMBRANE PROTEIN PSEUDORABIES VIRUS  54– HOMOLOG(STRAIN NIA-3) 76 PUL20_VZVD GENE 39 MEMBRANE PROTEIN VARICELLA-ZOSTERVIRUS 201– (STRAIN DUMAS) 224 PUL21_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS  91– UL21 (STRAIN AD169) 110 PUL21_HSVIT PROTEIN UL21HERPES SIMPLEX VIRUS (TYPE  98– 130– 1/STRAIN 17) 114 146 PUL21_H5VIEPROTEIN UL21 HERPES SIMPLEX VIRUS (TYPE  98– 130– 1/STRAIN HFEM) 114 146PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 119– 294– 379–412– (STRAIN AB4P) 142 321 401 427 PUL21_VZVD GENE 38 PROTEINVARICELLA-ZOSTER VIRUS 270– 300– (STRAIN DUMAS) 293 327 PUL22_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  44– UL22 (STRAIN AD169) 67PUL24_EBV PROTEIN BXRF1 EPSTEIN-BARR VIRUS 134– (STRAIN D95-8) 155PUL24_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 206– UL24 (STRAINAD169) 222 PUL24_HSVII PROTEIN UL24 HERPES SIMPLEX VIRUS (TYPE 147–1/STRAIN 17) 166 PUL24_ILTVT PROTEIN UL24 HOMOLOG INFECTIOUSLARYNGOTRACHEITIS 158– VIRUS (STRAIN THORNE V882) 179 PUL25_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 484– UL25 (STRAIN AD169) 500PUL25_HSVIl VIRION PROTEIN UL25 HERPES SIMPLEX VIRUS (TYPE  86– 1/STRAIN17) 101 PUL25_HSVED VIRION PROTEIN UL25 EQUINE HERPESVIRUS TYPE I  89–130– (STRAIN AB4P) 104 147 PUL25_HSVSA VIRION GENE 19 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 244– 344– 265 368 PUL25_ILTVT 64 1 KDVIRION PROTEIN INFECTIOUS LARYNGOTRACHEITIS 270– 316– VIRUS (STRAINTHORNE V882) 287 316 PUL27_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 307– 486– UL27 (STRAIN AD169) 324 507 PUL29_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 239– UL29 (STRAIN AD169) 266PUL30_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  9– UL30 (STRAINAD169) 32 PUL31_EBV PROTEIN BFLF2 EPSTEIN-BARR VIRUS 273– (STRAIN1395-8) 296 PUL31_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 410–582– UL31 (STRAIN AD169) 437 602 PUL31_HSVII PROTEIN UL31 HERPES SIMPLEXVIRUS (TYPE  95– I/STRAIN 17) 116 PUL31_HSVEB GENE 29 PROTEIN EQUINEHERPESVIRUS TYPE 1 104– 288– (STRAIN AB4P) 125 309 PUL3I_HSVSA GENE 69PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 145– 163– 161 190 PUL31_VZVDGENE 27 PROTEIN VARICELLA-ZOSTER VIRUS 117– 295– (STRAIN DUMAS) 138 316PUL32_HSV11 PROBABLE MAJOR ENV HERPES SIMPLEX VIRUS (TYPE 127– 564–GLYCOPROTEIN UL32 1/STRAIN 17) 143 585 PUL32_HSVES MAJOR ENVELOPE EQUINEHERPESVIRUS TYPE 1  81– GLYCOPROTEIN 300 (STRAIN AB4P) 108 PUL32_VZVDPROBABLE MAJOR ENV VARICELLA-ZOSTER VIRUS 553– GLYCOPROTEIN 26 (STRAINDUMAS) 574 PUL33_HCMVA G-PROTEIN COUPLED REC HUMAN CYTOMEGALOVIRUS  76–HOMOLOG UL33 (STRAIN AD169) 102 PUL34_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEOALOVIRUS 214– 297– UL34 (STRAIN AD169) 232 321 PUL34_HSVII VIRIONPROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE 251– 1/STRAIN 17) 275PUL34_HSVE8 VIRION GENE 26 PROTEIN EQUINE HERPESVIRUS TYPE 1 249–(STRAIN AB4P) 264 PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI(STRAIN II) 207– 229 PUL34_VZVD VIRION GENE 24 PROTEIN VARICELLA-ZOSTERVIRUS 244– (STRAIN DUMAS) 266 PUL35_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 229– 310– 331– UL35 (STRAIN AD169) 252 329 348PUL36_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 143– 387– UL36(STRAIN AD169) 168 410 PUL37_EBV PROTEIN BOLF1 EPSTEIN-BARR VIRUS  21–135– 707– 984– (STRAIN B95-8) 36 155 730 1004 PUL37_HSVII PROTEIN UL37HERPES SIMPLEX VIRUS (TYPE 229– 262– 445– 665–  758–  925– 1009–1/STRAIN 17) 252 277 467 681 777 947 1028 PUL37_HSVEB GENE 23 PROTEINEQUINE HERPESVIRUS TYPE 1 414– 491– 664– 778–  901– (STRAIN AB4P) 440510 690 805 919 PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN11)  5– 20 PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS  4– 104–140– 169–  196–  229–  244– 670– 776– (STRAIN DUMAS) 19 124 165 191 212244 269 694 803 904– 923 PUL38_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 199– UL38 (STRAIN AD169) 220 PUL40_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS  18– UL40 (STRAIN AD169) 35 PUL41_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  15– 116– UL41 (STRAIN AD169)31 134 PUL43_HSVII MEMBRANE PROTEIN UL43 HERPES SIMPLEX VIRUS (TYPE  41–139– 343– 394– 1/STRAIN 17) 63 160 365 421 PUL43_HSVEB GENE 17 MEMBRANEPROTEIN EQUINE HERPESVIRUS TYPE 1  34–  86– (STRAIN AB4P) 60 107PUL43_VZVD GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS  88– 127–160– 277–  574– (STRAIN DUMAS) 114 146 180 299 400 PUL45_HSVII PROTEINUL45 HERPES SIMPLEX VIRUS (TYPE  25– 1/STRAIN 17) 46 PUL45_HSVIK PROTEINUL45 HERPES SIMPLEX VIRUS (TYPE  25– 1/STRAIN KOS) 46 PUL45_HSVIMPROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE  25– 1/STRAIN MP) 46 PUL47_HCMVAPROTEIN UL47 HUMAN CYTOMEGALOVIRUS 193– 438– 533– 614–  741– (STRAINAD169) 218 464 556 640 766 PUL47_HSVII VIRION PROTEIN UL47 HERPESSIMPLEX VIRUS (TYPE 404– 1/STRAIN 17) 425 PUL47_HSVIF VIRION PROTEINUL47 HERPES SIMPLEX VIRUS (TYPE 404– 1/STRAIN F) 425 PUU47_HSVBP 80 7 KDALPHA TRANS- BOVINE HERPESVIRUS TYPE 1 681– INDUCING PROTEIN (STRAINPS-2) 702 PUL47_HSVE4 97 KD ALPHA TRANS- EQUINE HERPESVIRUS TYPE 4 580–INDUCING PROTEIN 601 PUL47_HSVEB 97 KD ALPHA TRANS- EQUINE HERPESVIRUSTYPE 1 587– INDUCING PROTEIN (STRAIN AB4P) 608 PUL47_VZVD ALPHATRANS-INDUCING VARICELLA-ZOSTER VIRUS  42– 608– FACTOR 91 8 KD PROTEIN(STRAIN DUMAS) 58 627 PUL49_EBV HYPOTHETICAL BFRF2 EPSTEIN-BARR VIRUS336– PROTEIN (STRAIN B95-8) 358 PUL49_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 248– 528– UL49 (STRAIN AD169) 264 543 PUL49_HSVI1TEGUMENT PROTEIN UL49 HERPES SIMPLEX VIRUS (TYPE 226– 1/STRAIN 17) 252PUL49_HSVSA HYPOTHETICAL GENE 66 HERPESVIRUS SAIMIRI (STRAIN 11) 232–PROTEIN 253 PUL50_HCMVA PROTEIN UL50 HUMAN CYTOMEGALOVIRUS  96– (STRAINAD169) 119 PUL51_HSVII PROTEIN UL51 HERPES SIMPLEX VIRUS (TYPE  9–1/STRAIN 17) 66 PUL51_HSVE4 GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 4169– (STRAIN 1942) 190 PUL51_HSVEB GENE 8 PROTEIN EQUINE HERPESVIRUSTYPE 1 166– (STRAIN AB4P) 189 PUL51_VZVD GENE 7 PROTEIN VARICELLA-ZOSTERVIRUS  30– (STRAIN DUMAS) 49 PUL52_EBV PROBABLE DNA REPLICATIONEPSTEIN-BARR VIRUS  44– PROTEIN BSLFI (STRAIN B95-8) 59 PUL52_HSVII DNAREPLICATION PROTEIN HERPES SIMPLEX VIRUS (TYPE  17–  65– UL52 1/STRAIN17) 37 91 PUL52_HSVE4 DNA REPLICATION PROTEIN EQUINE HERPESVIRUS TYPE 4 8– UL52 (STRAIN 1942) 27 PUL52_HSVED DNA REPLICATION PROTEIN EQUINEHERPESVIRUS TYPE 1  8– 135– 316– UL52 (STRAIN AB4P) 27 159 337PUL52_HSVSA PROBABLE DNA REPLICATION HERPESVIRUS SAIMIRI (STRAIN 11)489– 586– GENE 56 PROTEIN 508 605 PUL52_VZVD PROBABLE DNA REPLICATIONVARICELLA-ZOSTER VIRUS 446– 645– GENE 6 PROTEIN (STRAIN DUMAS) 466 670PUL53_HCMVA PROTEIN UL53 HUMAN CYTOMEGALOVIRUS 173– (STRAIN AD169) 188PUL53_HSV6U UL53 PROTEIN HOMOLOG HERPES SIMPLEX VIRUS (TYPE  64–6/STRAIN UGANDA-1102) 80 PUL60_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 120– UL60 (STRAIN AD169) 141 PUL62_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS  62– 178– UL62 (STRAIN AD169) 84 205PUL68_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  87– UL68 (STRAINAD169) 107 PUL70_HCMVA PROBABLE DNA REPLICATION HUMAN CYTOMEGALOVIRUS225– 409– 499– 626–  770– PROTEIN UL70 (STRAIN AD169) 252 430 514 645793 PUL71_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 234– UL71(STRAIN AD169) 250 PUL73_EBV HYPOTHETICAL BLRFI EPSTEIN-BARR VIRUS  62–PROTEIN (STRAIN B95-8) 87 PUL73_HSVSA HYPOTHETICAL GENE 53 HERPESVIRUSSAIMIRI (STRAIN II)  51– PROTEIN 73 PUL74_HCMVA HYPOTHETICAL PROTEINHUMAN CYTOMEGALOVIRUS  12– UL74 (STRAIN AD169) 32 PUL77_HCMVA VIRIONPROTEIN UL77 HUMAN CYTOMEGALOVIRUS 268– 607– (STRAIN AD169) 291 628PUL78_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  71– 190– UL78(STRAIN AD169) 90 205 PUL79_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS  40– UL79 (STRAIN AD169) 58 PUL84_HCMVA 65 KD EARLYHUMAN CYTOMEGALOVIRUS 100– NONSTRUCTURAL PROTEIN (STRAIN AD169) 116PUL84_HCMVT 65 KD EARLY HUMAN CYTOMEGALOVIRUS 100– NONSTRUCTURAL PROTEIN(STRAIN TOWNE) 116 PUL87_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS406– 530– B(C)RF1 (STRAIN B95-8) 422 557 PUL87_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 205– 309– 606– 633–  757– UL87 (STRAINAD169) 231 335 628 653 781 PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPESSIMPLEX VIRUS (TYPE 301– 507– 6/STRAIN UGANDA-1102) 322 529 PUL87_HSVSAHYPOTHETICAL GENE 24 HERPESVIRUS SAIMIRI (STRAIN II) 365– 402– 579–PROTEIN 387 422 595 PUL88_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 173– 252– UL88 (STRAIN AD169) 191 279 PUL88_HSV6UHYPOTHETICAL PROTEIN 6R HERPES SIMPLEX VIRUS (TYPE 150– 6/STRAINUGANDA-1102) 173 PUL90_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 35– UL90 (STRAIN AD169) 50 PUL91_HSV6U HYPOTHETICAL PROTEIN 8R HERPESSIMPLEX VIRUS (TYPE  43– 6/STRAIN UGANDA-1102) 65 PUL91_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  76– UL9I (STRAIN AD169) 99PUL92_HSV6U HYPOTHETICAL PROTEIN 9R HERPES SIMPLEX VIRUS (TYPE  36– 100–6/STRAIN UGANDA-1102) 55 119 PUL94_HCMVA PROTEIN UL94 HUMANCYTOMEGALOVIRUS (STRAIN  49– AD169) 70 PUL95_EBV HYPOTHETICAL PROTEINEPSTEIN-BARR VIRUS 201– BGLF3 (STRAIN B95-8) 223 PUL95_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 508– UL95 (STRAIN AD169) 526PUL95_HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS (TYPE  9– 328–6/STRAIN UGANDA-1102) 30 346 PUL95_HSVSA HYPOTHETICAL GENE 34 HERPESVWUSSAIMIRI (STRAIN 11) 187– PROTEIN 209 PUL97_HCMVA GANCICLOVIR KINASEHUMAN CYTOMEGALOVIRUS 208– 541– (STRAIN AD169) 228 567 PULA2_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 168– UL102 (STRAIN AD169) 183PULA3_HCMVA PROTEIN UL103 HUMAN CYTOMEGALOVIRUS  26– (STRAIN AD169) 47PULA4_HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS 215– 423– (STRAINAD169) 235 450 PULA8_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 93– UL108 (STRAIN AD169) 118 PULB1_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS  60– UL111 (STRAIN AD169) 81 PULB3_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 298– UL113 (STRAIN AD169) 319 PULB7_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 178– UL117 (STRAIN AD169) 195PULB8_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 103– UL118(STRAIN AD169) 130 PULC1_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 129– UL121 (STRAIN AD169) 153 PULD2_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS  4– UL132 (STRAIN AD169) 22 PUNO_FOWP1URACIL-DNA GLYCOSYLASE FOWLPOX VIRUS (STRAIN FP-I)  12– 37 PUNG_HSVEBURACIL-DNA GLYCOSYLASE EQUINE HERPESVIRUS TYPE 1 224– (STRAIN AB4P) 250PUNG_VACCC URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN  82–COPENHAGEN) 101 PUNG_VACCV URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAINWR)  82– 103 PUNG_VARV URACIL-DNA GLYCOSYLASE VARIOLA VIRUS  82– 103PUNG_VZVD URACIL-DNA GLYCOSYLASE VARICELLA-ZOSTERIVIRUS 217– (STRAINDUMAS) 243 PUS02_HSVEB GENE 68 PROTEIN EQUINE HERPESVIRUS TYPE 1  48–(STRAIN AIMP) 63 PUS02_HSVEK USI PROTEIN EQUINE HERPESVIRUS TYPE 1  48–(STRAIN KENTUCKY A) 63 PUS02_PRVN3 PROTEIN US2 HOMOLOG PSEUDORADIESVIRUS  120– (STRAIN MAO) 136 PUS03_HCMVA HQLFI PROTEIN HUMANCYTOMEGALOVIRUS  24– (STRAIN AD169) 39 PUS05_HSVJI PUTATIVE GLYCOPROTEINHERPES SIMPLEX VIRUS (TYPE  53– USS 1/STRAIN 17) 70 PUS05_HSV2 PUTATIVEGLYCOPROTEIN HERPES SIMPLEX VIRUS (TYPE  53– USS 2) 70 PUS09_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  179– HXLF3 (STRAIN AD169)206 PUS11_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  98– HXLFI(STRAIN AD169) 113 PUS12_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS  29– 113– 195– HVLF6 (STRAIN AD169) 50 135 222PUS13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  11– 208– HVLF5(STRAIN AD169) 33 231 PUS14_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 236– HVLF4 (STRAIN AD169) 260 PUS15_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 378– 443– HVLFJ (STRAIN AD169) 402 466PUS16_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 151– 243– HVLF2(STRAIN AD169) 174 267 PUS17_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 110– HVLFI (STRAIN AD169) 126 PUS19_HCMVA MEMBRANEPROTEIN HWLF4 HUMAN CYTOMEGALOVIRUS 120– 178– 214– (STRAIN AD169) 142202 232 PUS21_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  41– 155–HWLF2 (STRAIN AD169) 67 182 PUS22_HCMVA EARLY NUCLEAR PROTEIN HUMANCYTOMEGALOVIRUS 270– HWLF 1 (STRAIN AD169) 292 PUS23_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 292– HHLF7 (STRAIN AD169) 310 PUS24_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 352– HHLF6 (STRAIN AD169) 373PUS28_HCMVA G-PROTEIN COUPLED REC HUMAN CYTOMEGALOVIRUS  34– 140–HOMOLOG US28 (STRAIN AD169) 49 160 PUS28_HCMVT G-PROTEIN COUPLED RECHUMAN CYTOMEGALOVIRUS  34– 140– HOMOLOG US28 (STRAIN TOWNE) 49 160PUS29_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 246– HHRF4(STRAIN AD169) 269 PUS30_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 102– 208– HHRFS (STRAIN AD169) 128 233 PUS33_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEOALOVIRUS  41– HHLF3 (STRAIN AD169) 59PV07K_LSV 7 KD PROTEIN LILY SYMPTOMLESS VIRUS  27– 46 PV07K_NMV 7 KDPROTEIN POTATO VIRUS S (STRAIN  28– PERUVIAN) 49 PV07K_PVSP 7 KD PROTEINPOTATO VIRUS X (PVX)  31– 48 PV07K_PVX 7 KD PROTEIN POTATO VIRUS X(STRAIN XJ)  31– 48 PV07K_PVXX3 7 KD PROTEIN POTATO VIRUS X (STRAIN XC) 31– (STRAIN CP) 48 PV117_ASFLS LIS 121-1 PROTEIN AFRICAN SWINE FEVERVIRUS  73– (STRAIN L1S57) 94 PV12K_ASFL5 125 KD PROTEIN ALFALFA MOSAICVIRUS  59– (STRAIN 425/ISOLATE LEIDEN) 79 PV12K_PVMR 12 KD PROTEINPOTATO VIRUS M (STRAIN RUSSIAN)  79– 96 PV13K_TRVPL 16 KD PROTEINTOBACCO RATTLE VIRUS  24– (STRAIN PLB) 51 PV143_NPVAC HELICASEAUTOGRAPHA CALIFORNICA NUCLEAR  79– 846– 1013–  POLYHEDROSIS VIRUS 102863 1037 PV14K_BSMV 14 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS  14–  80–(BSMV) 29 99 PV18K_MLVAB 18 KD PROTEIN ABELSON MURINE LEUKEMIA VIRUS 29– 128– 44 154 PV19R_VACCV PROTEIN B19 VACCINIA VIRUS (STRAIN WR) 114–152– 132 172 PV1A_BBMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 196– 752– 220771 PV1A_BMV 1A PROTEIN BROME MOSAIC VIRUS 747– 767 PV1A_CCMV 1A PROTEINCOWPEA CHLOROTIC MOTTLE VIRUS 744– 763 PV1A_CMVFN 1A PROTEIN CUCUMBERMOSAIC VTRUS (STRAIN 775– FNY) 800 PV1A_CMVO 1A PROTEIN CUCUMBER MOSAICVIRUS 775– (STRAIN O) 800 PV1A_CMVQ 1A PROTEIN CUCUMBER MOSAIC VIRUS774– (STRAIN Q) 799 PV1A_PSVJ 1A PROTEIN PEANUT STUNT VIRUS (STRAIN J)472– 783– 493 808 PV23K_HSVTH 23 5 KD PROTEIN TURKEY HERPES VIRUS 176–(STRAIN H2) 191 PV28K_PLRVI 28 KD PROTEIN POTATO LEAP ROLL VTRUS (STRAIN 60– 192– 1) ( 76 207 PV28K_PLRVW 28 KD PROTEIN POTATO LEATROLL VIRUS 60– 192– (STRAIN WAGENINGEN) 76 207 PV29K_BWYVF 29 KD PROTEIN BEETWESTERN YELLOWS VIRUS  22– 136– (ISOLATE FL-1) 43 157 PV29K_PEBV 29 6 KDPROTEIN PEA EARLY BROWNING VIRUS 114– 132 PV2A_BMV 2A PROTEIN BROMEMOSAIC VIRUS 285– 759– 303 777 PV2A_CCMV 2A PROTEIN COWPEA CHLOROTICMOTTLE VIRUS 296– 314 PV2A_TAV 2A PROTEIN TOMATO ASPERMY VIRUS 234– 255PV30K_TRVTC 29 1 KD PROTEIN TOBACCO RATTLE VIRUS  62– (STRAIN TCM) 82PV31K_TOBSV 31 7 KD PROTEIN TOBACCO STREAK VIRUS 226– (STRAIN WC) 250PV362_ASFB7 K 362 PROTEIN AFRICAN SWINE FEVER VIRUS 145– (STRAIN BA71V)164 PV375_ASFLS LIS 375 PROTEIN AFRICAN SWINE FEVER VIRUS  114– (STRAINLIS57) 135 PV382_ASFLS LIS 382 PROTEIN AFRICAN SWINE FEVER VIRUS  114–(STRAIN LIS57) 135 PV3A_CCMV COWPEA CHLORTIC MOTTLE 160– VIRUS 187PV3A_CMVFN A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN 214– FNY) 235PV3A_CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS 214– (STRAIN M) 235 PV3A_CMVOA PROTEIN CUCUMBER MOSAIC VIRUS 214– (STRAIN O) 235 PV3A_CMVQ A PROTEINCUCUMBER MOSAIC VIRUS 214– (STRAIN Q) 235 PV3A_CMVY CUCUMBER MOSAICVIRUS 214– (STRAIN Y) 235 PV3A_IBVB 3A PROTEIN AVIAN INFECTIOUSBRONCHITIS  5– VIRUS (STRAIN BEAUDETTE) 28 PV3A_IBVM 3A PROTEIN AVIANINFECTIOUS BRONCHITIS  5– VIRUS (STRAIN M11) 28 PV3A_IBVP3 3A PROTEINAVIAN INFECTIOUS BRONCHITIS  5– VIRUS (STRAIN PORTUGAL/322/82) 28PV3A_IBVU5 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS  5– VIRUS (STRAINUK/183/66) 28 PV3A_TAV 3A PROTEIN TOMATO ASPERMY VIRUS  147– 168PV58K_BSMV 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS  320– 340PV66K_BWYVF PROTEIN 6B CANINE ENTERIC CORONA VIRUS  97– (STRAIN K378)116 PV70K_TYMVA 69 KD PROTEIN TURNIP YELLOW MOSAIC VIRUS  2– (AUSTRALIANISOLATE) 35 PV90K_AMVLE 90 KD PROTEIN ALFALFA MOSAIC VIRUS  44– (STRAIN425/ISOLATE LEIDEN) 59 PVA04_VACCC PROTEIN A4 VACCINIA VIRUS (STRAIN217– COPENHAGEN) 244 PVA04_VACCV PROTEIN A4 VACCINIA VIRUS (STRAIN WR)217– 244 PVA04_VARV PROTEIN A4 VARIOLA VIRUS 207– 234 PVA09_VACCCPROTEIN A9 VACCINIA VIRUS (STRAIN  41– COPENHAGEN) 66 PVA09_VARV PROTEINA9 VARIOLA VIRUS  41– 66 PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN 23– 140– 299– COPENHAGEN) 44 159 317 PVA11_VARV PROTEIN A11 VARIOLAVIRUS  23– 141– 300– 44 160 318 PVA14_VACCC PROTEIN A14 VACCINIA VIRUS(STRAIN  39– COPENHAGEN) 62 PVA14_VARV PROTEIN A14 VARIOLA VIRUS  39– 62PVA16_VACCC PROTEIN A16 VACCINIA VIRUS (STRAIN 341– COPENHAGEN) 362PVA16_VARV PROTEIN A16 VARIOLA VIRUS 340– 361 PVA18_VACCC 56 KD ABORTIVELATE VACCINIA VIRUS (STRAIN 429– PROTEIN COPENHAGEN) 447 PVA18_VACCV 56KD ABORTIVE LATE VACCINIA VIRUS (STRAIN WR) 429– PROTEIN 447 PVA18_VARV56 KD ABORTIVE LATE VARIOLA VIRUS 429– PROTEIN 447 PVA20_VACCC PROTEINA20 VACCINIA VIRUS (STRAIN 107– 193– COPENHAGEN) 131 209 PVA20_VARVPROTEIN A20 VARIOLA VIRUS 107– 193– 131 209 PVA23_VARV PROTEIN A23VARIOLA VIRUS  58– 82 PVA28_VACCV PROTEIN A28 VACCINIA VIRUS (STRAINWR),  53– AND (STRAIN COPENHAGEN) 76 PVA28_VARV PROTEIN A28 VARIOLAVIRUS  53– 76 PVA32_VACCV PROTEIN A32 VACCINIA VIRUS (STRAIN WR), 205–AND (STRAIN COPENHAGEN) 220 PVA32_VARV PROTEIN A32 VARIOLA VIRUS 175–190 PVA35_VACCC PROTEIN A35 PRECURSOR VACCINIA VIRUS (STRAIN  33–COPENHAGEN) 49 PVA35_VACCV PROTEIN A35 PRECURSOR VACCINIA VIRUS (STRAINWR)  33– 141– 49 164 PVA37_VACCC PROTEIN A37 VACCINIA VIRUS (STRAIN  66–COPENHAGEN) 90 PVA37_VACCV PROTEIN A37 VACCINIA VIRUS (STRAIN WR)  66–90 PVA40_VACCC PROTEIN A40 VACCINIA VIRUS (STRAIN  4– COPENHAGEN) 30PVA41_VACCC PROTEIN A41 PRECURSOR VACCINIA VIRUS (STRAIN  47–COPENHAGEN) 71 PVA41_VACCV PROTEIN A41 PRECURSOR VACCINIA VIRUS (STRAINWR)  47– 71 PVA41_VARV PROTEIN A41 PRECURSOR VARIOLA VIRUS  47– 71PVA47_VACCC PROTEIN A47 VACCINIA VIRUS (STRAIN  59– 201– COPENHAGEN) 79226 PVA47_VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN WR)  59– 201– 79 226PVA47_VARV PROTEIN A47 VARIOLA VIRUS  59– 201– 79 226 PVA55_VACCCPROTEIN A55 VACCINIA VIRUS (STRAIN 247– 384– COPENHAGEN) 266 404PVA55_VACCV PROTEIN A55 VACCINIA VIRUS (STRAIN WR) 247– 384– 266 404PVAL1_BCTV AL1 PROTEIN BEET CURLY TOP VIRUS  56– 75 PVAL1_CLVK AL1PROTEIN CASSAVA LATENT VIRUS  55– (STRAIN WEST KENYAN 844) 74 PVAL1_CLVNAL1 PROTEIN CASSAVA LATENT VIRUS  55– (STRAIN NIGERIAN) 74 PVAL3_UCTVAL3 PROTEIN BEET CURLY TOP VIRUS  82– 108 PVAL3_CLVK AL3 PROTEIN CASSAVALATENT VIRUS  77– (STRAIN WEST KENYAN 844) 97 PVAL3_CLVN AL3 PROTEINCASSAVA LATENT VIRUS  77– (STRAIN NIGERIAN) 97 PVAL3_TYLCM AL3 PROTEINTOMATO YELLOW LEAP CURL VIRUS  78– (STRAIN MARMANDE) 97 PVAL3_TYLCV AL3PROTEIN TOMATO YELLOW LEAP CURL VIRUS  77– 97 PVAT_CAMVC APHIDTRANSMISSION CAULIFLOWER MOSAIC VIRUS 134– PROTEIN (STRAIN CM-1841) 157PVAT_CAMVD APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134– PROTEIN(STRAIN D/H) 157 PVAT_CAMVE APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS134– PROTEIN (STRAIN BBC) 157 PVAT_CAMVN APHID TRANSMISSION CAULIFLOWERMOSAIC VIRUS 134– PROTEIN (STRAIN NY8153) 157 PVAT_CAMVP APHIDTRANSMISSION CAULIFLOWER MOSAIC VIRUS 134– PROTEIN (STRAIN PV147) 157PVAT_CAMVS APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134– PROTEIN(STRAIN STRASBOURG) 157 PVAT_CAMVW APHID TRANSMISSION CAULIFLOWER MOSAICVIRUS  34– PROTEIN (STRAIN W260) 60 PVAT_CERV APHID TRANSMISSIONCARNATION ETCHED RING VIRUS 141– PROTEIN 161 PVAT_FMVD APHIDTRANSMISSION FIGWORT MOSAIC VIRUS 132– PROTEIN (STRAIN DXS) 159PVB02_VACCC PROTEIN B2 VACCINIA VIRUS (STRAIN 155– COPENHAGEN) 170PVB02_VACCV PROTEIN B2 VACCINIA VIRUS (STRAIN WR) 155– 170 PVB04_VACCCPROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN) PVB04_VACCV PROTEIN B4VACCINIA VIRUS (STRAIN WR) PVB04_VARV PROTEIN B4 VARIOLA VIRUS 489– 511PVB05_VACCO PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LC16MO) 251–PROTEIN PRECURSOR 271 PVB05_VACCC PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS(STRAIN 251– PROTEIN PRECURSOR COPENHAGEN) 271 PVB05_VACCLPLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LISTER) 251– PROTEINPRECURSOR 271 PVB05_VACCV PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAINWR) 251– PROTEIN PRECURSOR 271 PVB06_VACCV PROTEIN B6 VACCINIA VIRUS(STRAIN WR),  59– AND (STRAIN COPENHAGEN) 82 PVB15_VACCC PROTEIN B16VACCINIA VIRUS (STRAIN 121– COPENHAGEN) 143 PVB15_VACCV PROTEIN B15VACCINIA VIRUS (STRAIN WR) 121– 143 PVB15_VARV PROTEIN B15 VARIOLA VIRUS121– 143 PVB17_VACCC PROTEIN B17 VACCINIA VIRUS (STRAIN 157– COPENHAGEN)179 PVB17_VACCV PROTEIN B17 VACCINIA VIRUS (STRAIN WR) PVBL1_CLVK BL1PROTEIN CASSAVA LATENT VIRUS  34– (STRAIN WEST KENYAN 844) 51 PVBL1_CLVNBL1 PROTEIN CASSAVA LATENT VIRUS  34– (STRAIN NIGERIAN) 51 PVBL1_SLCVBL1 PROTEIN SQUASH LEAP CURL VIRUS 245– 268 PVBR1_ABMVW BR1 PROTEINABUTILON MOSAIC VIRUS (ISOLATE 166– WEST INDIA) 191 PVBR1_BGMV BR1PROTEIN BEAN GOLDEN MOSAIC VIRUS 166– 191 PVBR1_PYMW BR1 PROTEIN POTATOYELLOW MOSAIC VIRUS 166– (ISOLATE VENEZUELA) 191 PVBR1_SLCV BR1 PROTEINSQUASH LEAF CURL VIRUS 193– 218 PVC01_VACCC PROTEIN C1 VACCINIA VIRUS(STRAIN  70– COPENHAGEN) 90 PVC01_VACCV PROTEIN C1 VACCINIA VIRUS(STRAIN WR)  75– 95 PVC01_VARV PROTEIN C1 VARIOLA VIRUS  58– 78PVC02_SFVKA HYPOTHETICAL PROTEIN C2 SHOPE FIBROMA VIRUS (STRAIN  8–KASZA) 31 PVC03_SFVKA G-PROTEIN COUPLED SHOPE FIBROMA VIRUS (STRAIN  98–179– RECEPTOR HOMOLOG C3 KASZA) 123 197 PVC04_VACCC PROTEIN C4 VACCINIAVIRUS (STRAIN 182– COPENHAGEN) 209 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS(STRAIN WR) 183– 208 PVC06_SFVKA HYPOTHETICAL PROTEIN C6 SHOPE FIBROMAVIRUS  20– (STRAIN KASZA) 47 PVC08_SFVKA HYPOTHETICAL PROTEIN C8 SHOPEFIBROMA VIRUS  14– (STRAIN KASZA) 30 PVC09_VACCC PROTEIN C9 VACCINIAVIRUS (STRAIN  40– COPENHAGEN) 59 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS(STRAIN WR)  40– 59 PVC10_SFVKA HYPOTHETICAL PROTEIN SHOPE FIBROMA VIRUS 85– C10 (STRAIN KASZA) 109 PVC10_VACCC PROTEIN C10 VACCINIA VIRUS(STRAIN  42– COPENHAGEN) 64 PVC10_VACCV PROTEIN C10 VACCINIA VIRUS(STRAIN WR)  42– 64 PVC10_VARV PROTEIN C10 VARIOLA VIRUS  42– 64PVC16_VACCC PROTEIN C16/B22 VACCINIA VIRUS (STRAIN  41– COPENHAGEN) 68PVC17_VACCC PROTEIN C17/B23 VACCINIA VIRUS (STRAIN 301– COPENHAGEN) 326PVC21_VACCC PROTEIN C21/B27 VACCINIA VIRUS (STRAIN  3– COPENHAGEN) 28PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS 148– 366– 1072– (STRAIN B95-8) 172 381 1095 PVCAP_HCMVA MAJOR CAPSID PROTEIN HUMANCYTOMEGALOVIRUS 668– 842– 871– (STRAIN AD169) 684 860 893 PVCAP_HSVIIMAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 283– 358– 1137– 1/STRAIN 17) 302 384 1152 PVCAP_HSVEB MAJOR CAPSID PROTEIN EQUINEHERPESVIRUS TYPE 1 357– 872– (STRAIN AD4P) 383 898 PVCAP_HSVSA MAJORCAPSID PROTEIN HERPES VIRUS SAIMIRI (STRAIN 144– 269– 357– 1062–  11)168 287 372 1089 PVCAP_PRVIS MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS335– (STRAIN INDIANA S) 362 PVCAP_VZVD MAJOR CAPSID PROTEINVARICELLA-ZOSTER VIRUS 381– 891– 1156–  (STRAIN DUMAS) 401 910 1176PVCG3_NPVAC DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  60–POLYHEDROSIS VIRUS 81 PVD03_VACCC PROTEIN D3 VACCINIA VIRUS  12– (STRAINCOPHNENHAGEN) 39 PVD03_VACCV PROTEIN D3 VACCINIA VIRUS (STRAIN WR)  2–39 PVD03_VARV PROTEIN D3 VARIOLA VIRUS  12– 39 PVD05_FOWPI 92 6 KDPROTEIN FOWLPOX VIRUS (STRAIN FP-I) 246– 315– 265 337 PVD05_SFVKAPROTEIN D5 SHOPE FIBROMA VIRUS  54– 171– (STRAIN KASZA) 78 198PVD05_VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN 320– 694– 715– COPENHAGEN)340 714 734 PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 320– 694–715– 340 714 734 PVD05_VARV PROTEIN D5 VARIOLA VIRUS 320– 694– 715– 340714 734 PVDBP_CAMVC DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS  37–(STRAIN CM-1841) 56 PVDBP_CAMVD DNA-BINDING PROTEIN CAULIFLOWER MOSAICVIRUS  37– (STRAIN D/II) 56 PVDBP_CAMVE DNA-BINDING PROTEIN CAULIFLOWERMOSAIC VIRUS  37– (STRAIN BBC) 56 PVDBP_CAMVN DNA-BINDING PROTEINCAULIFLOWER MOSAIC VIRUS  37– (STRAIN NY8153) 56 PVDBP_CAMVS DNA-BINDINGPROTEIN CAULIFLOWER MOSAIC VIRUS  37– (STRAIN STRASBOURG) 56 PVE02_VACCCPROTEIN E2 VACCINIA VIRUS (STRAIN  70– 355– 540– COPENHAGEN) 97 380 558PVE02_VACCV PROTEIN E2 VACCINIA VIRUS (STRAIN WR)  70– 355– 540– 97 380558 PVE02_VARV PROTEIN E2 VARIOLA VIRUS  70– 355– 540– 97 380 558PVE05_VACCC PROTEIN E5 VACCINIA VIRUS (STRAIN 314– COPENHAGEN) 329PVE05_VACCD PROTEIN E5 VACCINIA VIRUS 324– (STRAIN DAIREN I) 339PVE05_VACCV PROTEIN E5 VACCINIA VIRUS (STRAIN WR) 324– 339 PVE05_VARVPROTEIN E5 VARIOLA VIRUS 324– 339 PVE06_VACCC PROTEIN E6 VACCINIA VIRUS(STRAIN 430– COPENHAGEN) 451 PVE06_ACCV PROTEIN E6 VACCINIA VIRUS(STRAIN WR) 430– 451 PVE06_VARV PROTEIN E6 VARIOLA VIRUS 251– 430– 267451 PVE08_VACCC PROTEIN E8 VACCINIA VIRUS (STRAIN 254– COPENHAGEN) 270PVE08_VACCV PROTEIN E8 VACCINIA VIRUS (STRAIN WR) 254– 270 PVE08_VARVPROTEIN E8 VARIOLA VIRUS 254– 270 PVE12_HPVI6 PROBABLE E1 PROTEIN 2HUMAN PAPILLOMAVIRUS TYPE 16 167– 183 PVE18_NPVAC EARLY 18 5 KD PROTEINAUTOGRAPHA CALIFORNIA NUCLEAR 106– POLYHEDROSIS VIRUS 133 PVE1_BPVI E1PROTEIN BOVINE PAPILLOMA VIRUS TYPE 1 265– 517– 282 533 PVE1_BPVJ E1PROTEIN BOVINE PAPILLOMA VIRUS TYPE 2 265– 516– 281 532 PVE1_CRPVK E1PROTEIN COTTONTAIL RABBIT (SHOPE)  7– PAPILLOMA VIRUS (STRAIN KANSAS) 22PVE1_HPV11 E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE 11 258– 311– 275 334PVE1_HPV13 E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE 13 308– 324 PVE1_HPV18E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE 11 264– 317– 344– 281 333 364PVE1_HPV31 E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE 31 237– 254 PVE1_HPV33E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE 33 238– 260 PVE1_HPV39 E1 PROTEINHUMAN PAPILLOMA VIRUS TYPE 39 334– 354 PVE1_KPV41 E1 PROTEIN HUMANPAPILLOMA VIRUS TYPE 41 363– 380 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42 304– 320 PVE1_KPV51 E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE58 238– 260 PVE1_HPV6B E1 PROTEIN HUMAN PAPILLOMA VIRUS TYPE 68 258–311– 275 334 PVE1_PCPVI E1 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS 257–310– TYPE 1 274 326 PVE1_RHPVI E1 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1286– 309 PVE2_CRPVX PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) 308–PAPILLOMAVIRUS (STRAIN KANSAS) 333 PVE2_HPV11 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 11 285– 310 PVE2_HPV13 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 13 295– 320 PVE2_HPV18 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 18 288– 306 PVE2_HPV1A E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A 284– 300 PVE2_HPV2A E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 2A 311– 336 PVE2_HPV31 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 31 294– 312 PVE2_HPV33 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 33 275– 293 PVE2_KPV35 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 289– 307 PVE2_HPV39 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39 292– 310 PVE2_HPV42 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 42 321– 338 PVE2_HPV57 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 57 303– 328 PVE2_HPV6B E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 6B 286– 311 PVE2_PAPVD PROBABLE E2 PROTEIN DEERPAPILLOMAVIRUS 333– 351 PVE2_PCPVI E2 PROTEIN PYGMY CHIMPANANZEEPAPILLOMA 295– VIRUS TYPE 1 320 PVE2_RHPVI E2 PROTEIN RHESUSPAPILLOMAVIRUS TYPE 1 290– 308 PVE4_HPV18 PROBABLE E4 TROTEIN HUMANPAPILLOMAVIRUS TYPE 18  36– 59 PVE4_HPV41 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41  56– 76 PVE4_HPV5I PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51  59– 83 PVE4_RHPVI PROBABLE E4 PROTETN RHESUSPAPILLOMAVIRUS TYPE 1  63– 87 PVE5A_HPVII PROBABLE E5A PROTEIN HUMANPAPILLOMAVIRUS TYPE 11  19– 42 PVE5A_HPV6C PROBABLE E5A PROTEIN HUMANPAPILLOMAVIRUS TYPE 6C  19– 42 PVE5_DPVI E5 PROTEIN BOVINEPAPILLOMAVIRUS TYPE 1,  2– AND TYPE 2 26 PVE5_HPV1J PROBABLE E5 PROTEINHUMAN PAPILLOMAVIRUS TYPE 13  19– 42 PVE5_HPVJI PROBABLE E5 PROTEINHUMAN PAPILLOMAVIRUS TYPE 31  31– 52 PVE5_HPV41 PROBABLE E5 PROTEINHUMAN PAPILLOMAVIRUS TYPE 42  45– 65 PVE5_HPV51 PROBABLE E5 PROTEINHUMAN PAPILLOMAVIRUS TYPE 51  31– 52 PVE5_HPV5B PROBADLE E5 PROTEINHUMAN PAPILLOMAVIRUS TYPE 5B  89– 113 PVE5_RHPVI PROBABLE E5 PROTEINRHESUS PAPILLOMAVIRUS TYPE 1 109– 132 PVE6_BPVI E6 PROTEIN BOVINEPAPILLOMAVIRUS TYPE 1  23– 41 PVE6_CWVK E6 PROTEIN COTTONTAIL RABBIT(SHOPE)  6– PAPILLOMAVIRUS (STRAIN KANSAS) 23 PVE6_HPV01 E6 PROTEW HUMANPAPILLOMAVIRUS TYPE 1 133– 151 PVE6_HPV2A E6 PROTEIN HUMANPAPILLOMAVIRUS TYPE 2A  8– 27 PVE6_HPV33 E6 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 33  9– 26 PVE6_HPV35 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35  9– 26PVE6_HPV51 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51  9– 26 PVE6_HPV57 E6PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57  8– 27 PVE6_HPV58 E6 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51  9– 26 PVE6_MMPV E6 PROTEIN MICROMYS MINUTUSPAPILLOMAVIRUS  7–  36– 33 60 PVE7_CRPVK E7 PROTEIN COTTONTAIL RABBIT(SHOPE)  71– PAPILLOMAVIRUS (STRAIN KANSAS) 88 PVE7_HPVIJ E7 PROTEINHUMAN PAPILLOMAVIRUS TYPE 13  77– 93 PVE7_HPVSI E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51  61– 87 PVE7_HPV6B E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 6B  20– 37 PVE7_RHPV1 E7 PROTEIN RHESUSPAPILLOMAVIRUS TYPE 1  79– 105 PVE94_NPVAC EARLY 94 KD PROTEINAUTOGRAPHA CALIFORNIA NUCLEAR  78– 203– POLYHEDROSIS VIRUS 99 222PVEF_OVTN VIRAL ENHANCING FACTOR TOCHOPLUSIA NI GRANULOSIS VIRUS 154–237– 677– 175 260 696 PVENV_BEV ENVELOPE PROTEIN BERNE VIRUS  62–  87–86 114 PVENV_DHVII ENVELOPE GLYCOPROTEIN DHORI VIRUS  42– 484– PRECURSOR(STRAIN INDIAN/1313/61) 57 511 PVENV_EAV PROBABLE ENVELOPE EQUINEARTERITIS VIRUS  25– PROTEIN 41 PVENV_LELV PROBABLE ENVELOPE LELYSTADVIRUS  27– 148– PROTEIN 47 168 PVENV_MCV1 MAJOR ENVELOPE PROTEINMOLLUSCUM CONTAGIOSUM VIRUS  61– SUBTYPE 1 80 PVENV_MCV2 MAJOR ENVELOPEPROTEIN MOLLUSCUM CONTAGIOSUM VIRUS  61– 306– SUBTYPE 2 80 333PVENV_THOGV ENVELOPE GLYCOPROTEIN THOGOTO VIRUS 196– 356– 473– PRECURSOR221 383 491 PVETM_NPVAC ECORI-T SITE PROTEIN AUTOGRAPHA CALIFORNIANUCLEAR  82– ETM POLYHEDROSIS VIRUS 105 PVF05_VACCC 36 KD MAJOR MEMBRANEVACCINIA VIRUS (STRAIN 280– PROTEIN PRECURSOR COPENHAGEN) 305PVF05_VACCP 36 KD MAJOR MEMBRANE VACCINIA VIRUS 280– PROTEIN PRECURSOR(STRAIN L-IVP) 305 PVF05_VACCV 36 KB MAJOR MEMBRANE VACCINIA VIRUS(STRAIN WR) 281– PROTEIN PRECURSOR 306 PVF05_VAJW 36 KD MAJOR MEMBRANEVARIOLA VIRUS 280– PROTEIN PRECURSOR 305 PVF09_VACCC PROTEIN F9 VACCINIAVIRUS (STRAIN 176– COPENHAGEN), AND (STRAIN L-IVP) 200 PVF09_VACCVPROTEIN F9 VACCINIA VIRUS (STRAIN WR) 176– 200 PVF09_VARV PROTEIN F9VARIOLA VIRUS 176– 200 PVF11_VACCC PROTEIN F11 VACCINIA VIRUS (STRAIN161– COPENHAGEN) 184 PVF11_VARV PROTEIN F11 VARIOLA VIRUS 161– 184PVF15_VACCC PROTEIN F15 VACCINIA VIRUS (STRAIN  25– COPENHAGEN) 48PVF15_VACCP PROTEIN F15 VACCINIA VIRUS  3– (STRAIN L-IVP) 26 PVF15_VARVPROTEIN F15 VARIOLA VIRUS  28– 51 PVFP1_FOWPV PROTEIN FP1 FOWLPOX VIRUS 297– 323 PVFP2_FOWPV PROTEIN FP2 FOWLPOX VIRUS  88– 104 PVFP7_CAPVKPROTEIN F7 CAPRIPOXVIRUS  89– (STRAIN KS-I) 111 PVFP7_FOWPV PROTEIN FP7FOWLPOX VIRUS  65– 90 PVFP8_CAPVK CF8A PROTEIN CAPRIPOXVIRUS  51–(STRAIN KS-1) 76 PVFUS_ORFNZ 10 KD FUSION PROTEIN ORF VIRUS  29– (STRAINNZ2) 48 PVFUS_VACC6 14 KD FUSION PROTEIN VACCINIA VIRUS  72– (STRAIN WR65-16) 94 PVG01_HSVEB HYPOTHETICAL GENE 1 EQUINE HERPESVIRUS TYPE 1 169–PROTEIN (STRAIN AB4P) 195 PVG01_HSV1I HYPOTHETICAL GENE 1 ICTALURIDHERPES VIRUS 1 210– 317– 589– PROTEIN 225 339 616 PVG01_VACCC PROTEIN G1VACCINIA VIRUS (STRAIN 298– 376– COPENHAGEN) 318 395 PVG01_VACCV PROTEING1 VACCINIA VIRUS (STRAIN WR) 237– 315– 257 334 PVG01_VARV PROTEIN G1VARIOLA VIRUS 298– 376– 318 395 PVG01_VZVD HYPOTHETICAL GENE 1VARICELLA-ZOSTER VIRUS  58– PROTEIN (STRAIN DUMAS) 82 PVG03_VACCCPROTEIN G3 VACCINIA VIRUS (STRAIN  50– COPENHAGEN) 72 PVG03_VARV PROTEING3 VARIOLA VIRUS  50– 72 PVG04_VACCC PROTEIN G4 VACCINIA VIRUS (STRAIN 11– COPENHAGEN) 33 PVG04_VARV PROTEIN G4 VARIOLA VIRUS  11– 33PVG06_VACCC PROTEIN G6 VACCINIA VIRUS (STRAIN  31– COPENHAGEN) 51PVG06_VARV PROTEIN G6 VARIOLA VIRUS  31– 51 PVG08_HSV1I HYPOTHETICALGENE 1 ICTALURID HERPESVIRUS 1 134– 159– MEMBRANE PROTEIN 149 185PVG10_HSVII HYPOTHETICAL GENE 10 ICTALURID HERPESVIRUS 1  35– MEMBRANEPROTEIN 54 PVG10_HSVSA HERPESVIRUS SAIMIRI HERPESVIRUS SAIMIRI (STRAINII) 109– 355– 124 379 PVG11_HSVII HYPOTHETICAL GENE 11 ICTALURIDHERPESVIRUS 1 103– 150– ZINC-BINDING PROTEIN 122 176 PVG12_HSVIIHYPOTHETICAL GENE 12 ICTALURID HERPESVIRUS 1 151– 270– ZINC-BINDINGPROTEIN 178 286 PVG12_HSVSA HYPOTHETICAL GENE 12 HERPESVIRUS SAIMIRI(STRAIN II)  68– PROTEIN 92 PVG19_HSVII HYPOTHETICAL GENE 19 ICTALURIDHERPESVIRUS 1  88– MEMBRANE PROTEIN 112 PVGIL_AMEPV GIL PROTEIN AMSACTAMOOREI ENTOMOPOXVIRUS 313– 336 PVGI_SPV1R CAPSID PROTEIN SPIROPLASMAVIRUS 5PV1-R8A2 B  76– 659– 92 678 PVG22_HSV1I HYPOTHETICAL GENE 22ICTALURID HERPESVIRUS 1 300– PROTEIN 327 PVG23_HSVII HYPOTHETICAL GENE23 ICTALURID HERPESVIRUS 1 314– PROTEIN 335 PVG27_HSVII HYPOTHETICALGENE 27 ICTALURID HERPESVIRUS 1 158– PROTEIN 184 PVG27_HSV5AHYPOTHETICAL GENE 27 HERPESVIRUS SAIMIRI (STRAIN II) 209– PROTEIN 226PVG28_HSVII HYPOTHETICAL GENE 21 ICTALURID HERPESVIRUS 1 173– 491–PROTEIN 197 518 PVG28_HSVSA HYPOTHETICAL GENE 28 HERPESVIRUS SAIMIRI(STRAIN 11)  14– PROTEIN 40 PVG29_HSVII HYPOTHETICAL GENE 29 ICTALURIDHERPESVIRUS 1  20– PROTEIN 42 PVG30_HSVII HYPOTHETICAL GENE 30 ICTALURIDHERPESVIRUS 1 166– PROTEIN 191 PVG32_VZVD GENE 32 PROTEINVARICELLA-ZOSTER VIRUS  90– (STRAIN DUMAS) 109 PVG36_HSVSA POSSIBLETYROSINE- HERPESVIRUS SAIMIRI (STRAIN 11) 108– 344– PROTEIN KINASE 123362 PVG37_HSVII HYPOTHETICAL GENE 37 ICTALURID HERPESVIRUS 1 284–PROTEIN 299 PVG39_HSVII HYPOTHETICAL GENE 39 ICTALURID HERPESVIRUS 1648– 970– 1038–  PROTEIN 675 990 1065 PVG40_HSV1I HYPOTHETICAL GENE 40ICTALURID HERPESVIRUS 1  14– PROTEIN 32 PVG41_HSVII HYPOTHETICAL GENE 41ICTALURID HERPESVIRUS 1  11–  62– 244– PROTEIN 38 81 260 PVG43_HSVIIHYPOTHETICAL GENE 43 ICTALURID HERPESVIRUS 1 109– 157– 322– 521– PROTEIN133 178 345 538 PVG46_HSVII PROBABLE MAJOR ICTALURID HERPESVIRUS 1 134–580– 937– 1244–  GLYCOPROTEIN 156 607 963 1270 PVG48_HSVII HYPOTHETICALGENE 41 ICTALURID HERPESVIRUS 1  71– PROTEIN 93 PVG50_HSVSA PROBTRANSCRIPTION HERPESVIRUS SAIMIRI (STRAIN II)  5–  58– ACTIVATOR EDRF 130 83 PVG51_HSVII HYP GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1  29–  84–PROTEIN 49 102 PVG52_HSVII HYPOTHETICAL GENE 52 ICTALURID HERPESVIRUS 1229– PROTEIN 252 PVG55_HSVII HYPOTHETICAL GENE 55 ICTALURID HERPESVIRUS1  22– 143– 288– PROTEIN 37 158 309 PVG55_HSVSA HYPOTHETICAL GENE 55HERPESVIRUS SAIMIRI (STRAIN II)  85– PROTEIN 106 PVG56_HSVIIHYPOTHETICAL GENE 56 ICTALURID HERPESVIRUS 1 1155–  PROTEIN 1176PVG58_HSVSA GENE 58 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 130– 266–293– 330– 146 288 319 346 PVG59_HSVII HYP GENE 59 MEMBRANE ICTALURIDHERPESVIRUS 1 142– 267– PROTEIN 161 289 PVG5_SPV4 GENE 5 PROTEINSPIROPLASMA VIRUS 4  42– 64 PVG60_HSVII HYPOTHETICAL GENE 60 ICTALURIDHERPESVIRUS 1  30–  53– PROTEIN 51 75 PVG61_HSVJI HYPOTHETICAL GENE 61ICTALURID HERPESVIRUS 1  76– 117– PROTEIN 102 136 PVG63_HSVIIHYPOTHETICAL GENE 63 ICTALURID HERPESVIRUS 1 238– 336– PROTEIN 259 363PVG64_HSVII HYPOTHETICAL GENE 64 ICTALURID HERTESVIRUS 1 420– PROTEIN445 PVG65_HSVII HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 117– 155–362– 518– 1147– 1347– PROTEIN 137 173 378 533 1174 1369 PV067_HSVilHYPOTHETICAL GENE 67 ICTALURID HERPESVIRUS 1 108– 171– 318– 722– 1005–1072– 1315– PROTEIN 132 188 344 745 1029 1091 1341 PVG6_SPVIR GENE 6PROTEIN SPIROPLASMA VIRUS SPVI-RBA2 B  60– 82 PV070_HSVII HYPOTHETICALGENE 70 ICTALURID HERPESVIRUS 1 184– PROTEIN 209 PV071_HSVSAHYPOTHETICAL GENE 71 HERPESVIRUS SAIMIRI (STRAIN 11)  89– PROTEIN 105PV072_HSVM IYPOTHETICAL GENE 72 ICTALURID HERPESVIRUS 1 445– 535– 720–1252–  PROTEIN 471 561 744 1269 PVG74_HSVSA G-PROTEIN COUPLED RECHERPESVIRUS SAIMIRI (STRAIN II) 124– HOMOLOG ECRF3 151 PVG9_SPVIR GENE 9PROTEIN SPIROPLASMA VIRUS SPVI-R8A2 B  57– 72 PGVF1_IBVB F1 PROTEINAVIAN INFECTIOUS BRONCHITIS 1587–  1856–  2108–  2210–  2788– 2973–3073– 3120–  3374–  VIRUS (STRAIN BEAUDETTE) 1606 1877 2127 2226 28062999 3090 3145 3399 3601–  3625 PVGH3_HCMVA GLYCOPROTEIN H301 HUMANCYTOMEGALOVIRUS 157– PRECURSOR (STRAIN AD169) 178 PVGL1_CVPR8 ElGLYCOPROTEIN PORCINE RESPIRATORY CORONAVIRUS 174– PRECURSOR (STRAIN 16/1J7004/BRITISIH IS 193 PVGL2_CVBF E2 GLYCOPROTEIN BOVINE CORONAVIRUS  10–123– 174– 264–  991– 1259– PRECURSOR (STRAIN F15) 33 139 190 279 10171280 PVGL2_CVBL9 E2 GLYCOPROTEIN BOVINE CORONAVIRUS 123– 174– 264– 651– 991– 1259– PRECURSOR (STRAIN L9) 139 190 279 674 1017 1280 PVGL2_CVBLYE2 GLYCOPROTEIN BOVINE CORONAVIRUS  10– 123– 174– 264–  991– 1259–PRECURSOR (STRAIN LY-138) 33 139 190 279 1017 1280 PVGL2_CVBM E2GLYCOPROTEIN BOVINE CORONAVIRUS 123– 174– 264– 991– 1259– PRECURSOR(STRAIN MEDUS) 139 190 279 1017 1210 PVGL2_CVBQ E2 GLYCOPROTEIN BOVINECORONAVIRUS  31– 123– 174– 264–  991– 1259– PRECURSOR (STRAIN QUEBEC) 47139 190 279 1017 1280 PVGL2_CVBV E2 GLYCOPROTEIN BOVINE CORONAVIRUS 123–174– 264– 991– 1259– PRECURSOR (STRAIN VACCINE) 139 190 279 1017 1280PVGL2_CVH22 E2 GLYCOPROTEIN HUMAN CORONAVIRUS 768– 1053–  1115– PRECURSOR (STRAIN 229E) 794 1071 1134 PVGL2_CVM4 E2 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN  95– 999– 1267–  1317–  PRECURSOR WILD TYPE 4)111 1025 1290 1338 PVGL2_CVMAS E2 GLYCOPROTEIN MURINE CORONAVIRUS MHV(STRAIN  95– 947– 1215–  1265–  PRECURSOR AS9) 111 973 1238 1286PVGL2_CVMJC E2 GLYCOPROTEIN MURINE CORONAVIRUS MHV (STRAIN  95– 999–1267–  1317–  PRECURSOR JHMV/VARIANT CL-2) 111 1025 1290 1338PVGL2_CVNUH E2 GLYCOPROTEIN MURINE CORONAVIRUS MHV (STRAIN  95– 858–1126–  1176–  PRECURSOR JHM) 111 884 1149 1197 PVGL2_CVPFS E2GLYCOPROTEIN PORCINE TRANSMISSIBLE  64– 442– 800– 1038–  1274– PRECURSORGASTROENTERITIS CORONAVIRUS 83 457 816 1064 1297 (STRAI PVGL2_CVPM1 E2GLYCOPROTEIN PORCINE TRANSMISSIBLE  64– 442– 506– 800– 1018– 1274–PRECURSOR GASTROENTERITIS CORONAVIRUS 83 457 521 816 1064 1297 (STRAIPVGL2_CVTPR E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE  64– 440– 504– 798–1036– 1272– PRECURSOR GASTROENTERITIS CORONAVIRUS 83 455 519 814 10621295 (STRAI PVGL2_CVPPU E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE  64– 440–504– 798– 1036– 1272– PRECURSOR GASTROENTERITIS CORONAVIRUS 83 455 519814 1062 1295 (STRAI PVGL2_CVPRJ E2 GLYCOPROTEIN PORCINE RESPIRATORYCORONAVIRUS 218– 576– 814– 100– PRECURSOR (STRAIN 86/137004/BRITISH 1233 592 840 103 PVGL2_CVPRM E2 GLYCOPROTEIN PORCINE RESPIRATORYCORONAVIRUS 218– 576– 814– 1050–  PRECURSOR (STRAIN RM4) 233 592 8401073 PVGL2_CVPRT E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE  64– 440– 504–798– 1036– 1272– PRECURSOR GASTROENTERITIS CORONAVIRUS 83 455 519 8141062 1295 (STRAI PVGL2_FIPV E2 GLYCOPROTEIN FELINE INFECTIOUSPERITONITIS 803– 1041–  1277–  PRECURSOR VIRUS (STRAIN 79-1146) 819 10671300 PVGL2_IBV6 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196– 588–771– 1056–  1094– PRECURSOR VIRUS (STRAIN 6/82) 219 607 797 1081 1111PVGL2_IBVB E2 OLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195– 587– 770–1055–  PRECURSOR VIRUS (STRAIN BEAUDETTE) 218 606 796 1080 PVGL2_IBVD2E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196– 588– 771– 1056– PRECURSOR VIRUS (STRAIN D274) ( 219 607 797 1081 PVGL2_IBVD3 E2GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196– PRECURSOR VIRUS (STRAINDJS96) 219 PVGL2_IBVK E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195–587– 770– 1055–  PRECURSOR VIRUS (STRAIN KB8523) 218 606 796 1080PVGL2_IBVM E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195– 378– 587–770– 1055– PRECURSOR VIRUS (STRAIN M4I) 218 398 606 796 1080 PVGL2_IBVBE2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 178– VIRUS (STRAINUK/123/82) 201 PVGL2_IBVU2 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS178– VIRUS (STRAIN UK/142/86) 201 PVGL2_IBVU3 E2 GLYCOPROTEIN AVIANINFECTIOUS BRONCHITIS 178– VIRUS (STRAIN UK/167/84) 201 PVGLB_EBVGLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS 732– PRECURSOR (STRAIN B95-8) 752PVGLB_HCMVA GLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 535– 706– 750–PRECURSOR (STRAIN AD169) 558 732 777 PVOLB_HCMVT GLYCOPROTEIN B HUMANCYTOMEGALOVIRUS 536– 707– 751– PRECURSOR (STRAIN TOWNE) 559 733 778PVGLB_HSV11 GLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE  83– PRECURSOR1/STRAIN 17) 104 PVGLB_HSVIF GLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE 82– PRECURSOR 1/STRAIN F) 103 PVGLB_HSVIK GLYCOPROTEIN B HERPES SIMPLEXVIRUS (TYPE  82– PRECURSOR 1/STRAIN KOS) 103 PVGLB_H5VIP GLYCOPROTEIN BHERPES SIMPLEX VIRUS (TYPE  83– PRECURSOR 1/STRAIN PATTON) 104PVGLB_HSV23 GLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE  79– PRECURSOR2/STRAIN 333) 99 PVGLB_HSV2H GLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE 79– PRECURSOR 2/STRAIN HGS2) 99 PVGLB_HSV2S GLYCOPROTEIN B HERPESSIMPLEX VIRUS (TYPE  65– PRECURSOR 2/STRAIN SA) 85 PVGLB_HSV6UGLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE  72– 117– (FRAGMENT) 6/STRAINUGANDA-1102) 92 144 PVGLB_HSVBI GLYCOPROTEIN 1 BOVINE HERPESVIRUS TYPE 1560– 689– PRECURSOR 578 707 PVGLB_HSVB2 GLYCOPROTEIN B-1 BOVINEHERPESVIRUS TYPE 2 279– 745– PRECURSOR (STRAIN BMV) (BOVINE 299 767MAMMILLITIS PVGLB_HSVBC GLYCOPROTEIN 1 BOVINE HERPESVIRUS TYPE 1 692–PRECURSOR (STRAIN COOPER) 710 PVGLB_HSVEI GLYCOPROTEIN B EQUINEHERPESVIRUS TYPE 1 736– PRECURSOR (ISOLATE HVS25A) (EHV-1) 753PVGLB_HSVE4 GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 675– PRECURSOR(STRAIN ABI) 692 PVGLB_HSVEA GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1736– PRECURSOR (STRAIN ABI) 753 PVGLB_HSVEB GLYCOPROTEIN B EQUINEHERPESVIRUS TYPE 1 736– PRECURSOR (STRAIN AI34P) 753 PVGLB_HSVELGLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736– PRECURSOR (STRAIN KENTUCKYD) 753 PVGLB_HSVMD GLYCOPROTEIN B MAREK'S DISEASE HERPESVIRUS 589–PRECURSOR (STRAIN RB-1B) 613 PVGLB_HSVSA GLYCOPROTEIN B HERPESVIRUSSAIMIRI (STRAIN 11) 483– 584– 701– PRECURSOR 506 602 716 PVGLB_ILTV6GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEITIS 256– 597– 740– PRECURSORVIRUS (STRAIN 6J2) 275 621 758 PVGLB_ILTVS GLYCOPROTEIN B INFECTIOUSLARYNGOTRACHEITIS 266– 607– 750– PRECURSOR VIRUS (STRAIN SA-2) 285 631768 PVGLB_ILTVT GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEITIS 266– 607–750– PRECURSOR VIRUS (STRAIN THORNE V882) 285 631 768 PVGLB_MCMVSGLYCOPROTEIN B MURINE CYTOMEGALOVIRUS 135– 566– 738– PRECURSOR (STRAINSMITH) 156 589 765 PVGLB_PRVIF GLYCOPROTEIN GII PSEUDORABIES VIRUS(STRAIN 203– PRECURSOR INDIANA-FUNKMAUSER/MI-CKI-IK) 218 PVGLB_VZVDGLYCOPROTEIN B VARICELLA-ZOSTER VIRUS 522– PRECURSOR (STRAIN DUMAS) 538PVGLC_HSVI1 GLYCOPROTEIN C HERPES SIMPLEX VIRUS (TYPE  3– 467– PRECURSOR1/STRAIN 17) 22 493 PVGLC_HSVIK GLYCOPROTEIN C HERPES SIMPLEX VIRUS(TYPE  3– 467– PRECURSOR 1/STRAIN KOS) 22 493 PVGLC_HSV2 GLYCOPROTEIN CHERPES SIMPLEX VIRUS (TYPE 435– PRECURSOR 2) 458 PVGLC_HSV23GLYCOPROTEIN C HERPES SIMPLEX VIRUS (TYPE 436– PRECURSOR 2/STRAIN 333)450 PVGLC_HSVBC GLYCOPROTEIN GIII BOVINE HBRPESVIRUS TYPE 1 475–PRECURSOR (STRAIN COOPER) 494 PVGLC_HSVE4 GLYCOPROTEIN C EQUINEHERPESVIRUS TYPE 4 444– PRECURSOR (STRAIN 1942) 459 PVGLC_HSVEBGLYCOPROTEIN C EQUINE HERPESVIRUS TYPE 1 427– PRECURSOR (STRAIN A4BP)AND (STRAIN KENTUCK 442 PVGLC_HSVMB SECRETORY GLYCOPROTEIN MAREK'SDISEASE HERPESVIRUS 399– GP57-65 PRECURSOR (STRAIN HC-I) 421 PVGLC_HSVMDSECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399– GP57-65PRECURSOR (STRAIN RB-1B) 421 PVGLC_HSVMG SECRETORY GLYCOPROTEIN MAREK'SDISEASE HERPESVIRUS 398– GP57-65 PRECURSOR (STRAIN OA) 420 PVGLC_HSVMMSECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399– GP57-65PRECURSOR (STRAIN MD5) 421 PVGLC_PRVTF GLYCOPROTEIN GIII PSEUDORABIESVIRUS (STRAIN 180– 446– PRECURSOR INDIANA-FUNKHAUSER/BECKER) 197 472PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 431– (STRAIN DUMAS)449 PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 431– (STRAINSCOTT) 449 PVGLD_HSVII GLYCOPROTEIN D HERPES SIMPLEX VIRUS (TYPE  79–PRECURSOR I/STRAIN 17), AND (TYPE 1/STRAIN 94 PVGLD_HSV7 GLYCOPROTEIN DHERPES SIMPLEX VIRUS (TYPE  79– PRECURSOR 2) 94 PVGLE_HSVI1 GLYCOPROTEINE HERPES SIMPLEX VIRUS (TYPE 104– 413– PRECURSOR 1/STRAIN 17) 129 437PVGLE_VZVD GLYCOPROTEIN E VARICELLA-ZOSTER VIRUS 469– PRECURSOR (STRAINDUMAS) 493 PVGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL205– 265– 482– PRECURSOR VIRUS (STRAIN A51908) 221 287 504 PVGLF_BRSVCFUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL 205– 265– 484–PRECURSOR VIRUS (STRAIN COPENHAGEN) 221 280 506 PVGLF_BRSVR FUSIONGLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL 205– 265– 484– PRECURSOR VIRUS(STRAIN RB94) 221 280 506 PVGLF_COVO FUSION GLYCOPROTEIN CANINEDISTEMPER VIRUS 336– 398– 562– PRECURSOR (STRAIN ONDERSTEPOORT) 361 414589 PVGLF_HRSVI FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL 205–265– 484– PRECURSOR VIRUS (SUBGROUP B/STRAIN 185 221 280 506 PVGLF_HXSVAFUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL 205– 265– 484– PRECURSORVIRUS (STRAIN A2) 221 280 506 PVGLF_HASVL FUSION GLYCOPROTEIN HUMANRESPIRATORY SYNCYTIAL 205– 265– 484– PRECURSOR VIRUS (SUBGROUP A/STRAINLO 221 280 506 PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORYSYNCYTIAL 205– 265– 484– PRECURSOR VIRUS (STRAIN RSS-2) 221 280 506PVGLF_MEASE FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN 224– 286– 451–PRECURSOR EDMONSTON) and (STRAIN HALLE) 245 302 477 PVGLF_MEASI FUSIONGLYCOPROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 227– 289– 454– PRECURSOR 248305 480 PVGLF_MEASY FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN 224– 286–451– PRECURSOR YAMAGATA-I) 245 302 477 PVGLF_MUMPI FUSION GLYCOPROTEINMUMPS VIRUS (STRAIN SBL-1)  5– 276– 446– PRECURSOR 20 292 467PVGLF_MUMPM FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN MIYAHARA 276– 446–PRECURSOR VACCINE) 292 467 PVGLF_MUMPR FUSION GLYCOPROTEIN MUMPS VIRUS(STRAIN RW) 276– 446– PRECURSOR 292 467 PVGLF_MUMPS FUSION GLYCOPROTEINMUMPS VIRUS (STRAIN SBL)  5– 276– 446– PRECURSOR 20 292 467 PVGLF_NDVAFUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273– PRECURSOR (STRAINAUSTRALIA-VICTORIA/32) 289 PVGLF_NDVB FUSION GLYCOPROTEIN NEWCASTLEDISEASE VIRUS 273– PRECURSOR (STRAIN BEAUDETTE C/45) 289 PVGLF_NDVH3FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273– PRECURSOR (STRAINHER/33) 289 PVGLF_NDVH4 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273–PRECURSOR (STRAIN BI-HITCHNER/47) 289 PVGLF_NDVL FUSION GLYCOPROTEINNEWCASTLE DISEASE VIRUS 273– PRECURSOR (STRAIN LAS/46) 289 PVGLF_NDVMFUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273– PRECURSOR (STRAINMIYADERA/SI) 289 PVGLF_NDVQ FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS273– PRECURSOR (STRAIN QUEENSLAND/66) 289 PVGLF_NDVT FUSION GLYCOPROTEINNEWCASTLE DISEASE VIRUS 273– PRECURSOR (STRAIN TEXAS) 289 PVGLF_NDVTGFUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273– PRECURSOR (STRAIN TEXASGB/48) 289 PVGLF_NDVU FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273–PRECURSOR (STRAIN ULSTER/67) 289 PVGLF_PHODV FUSION GLYCOPROTEIN PHOCINEDISTEMPER VIRUS 269– 305– 367– 531– PRECURSOR 285 326 383 551PVGLF_P1IHC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS 456–PRECURSOR (STRAIN C39) 477 PVGLF_PI2H FUSION GLYCOPROTEIN HUMANPARAINFLUENZA 2 VIRUS 450– PRECURSOR (PIV.J) 471 PVGLF_PI2HG FUSIONGLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 450– PRECURSOR (STRAIN GREER)471 PVGLF_PI2HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 450–PRECURSOR (STRAIN TOSHIBA) 471 PVGLF_P13B FUSION GLYCOPROTEIN BOVINEPARAINFLUHNZA 3 VIRUS 405– 453– PRECURSOR 426 474 PVGLF_PI3H4 FUSIONGLYCOPROTEIN HUMAN PARAINFLUENZA 3 VIRUS  2– 283– 453– PRECURSOR (STRAINNIII 47885) 20 310 474 PVGLF_JUNDK FUSION GLYCOPROTEIN RINDERPEST VIRUS220– 282– 447– PRECURSOR (STRAIN KABETE O) 241 298 473 PVGLF_PJNDLFUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN L) 220– 282– 447– PRECURSOR241 298 473 PVGLF_SENDI FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z/HOST460– PRECURSOR MUTANTS) 481 PVGLF_SENDF FUSION GLYCOPROTEIN SENDAI VIRUS(STRAIN FUSHIMI) 460– PRECURSOR 481 PVGLF_SENDII FUSION GLYCOPROTEINSENDAI VIRUS (STRAIN HARRIS) 460– PRECURSOR 481 PVGLF_SENT FUSIONGLYCOPROTEIN SENDAI VIRUS (STRAIN HV3) 460– PRECURSOR 481 PVGLF_SENDZFUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z) 460– RECURSOR 481 PVGLF_SV4IFUSION GLYCOPROTEIN SIMIAN VIRUS 41 453– PRECURSOR 474 PVGLF_SV5 FUSIONGLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3) 401– 446– PRECURSOR 425 467PVGLF_TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS VIRUS 175– 452–PRECURSOR 191 474 PVGLG_IHNV SPIKE GLYCOPROTEIN INFECTIOUS HEMATOPOIETIC 77– PRECURSOR NECROSIS VIRUS (STRAIN ROUND 99 HUT PVGLG_RABVE SPIKEGLYCOPROTEIN RABIES VIRUS (STRAIN ERA) 454– PRECURSOR 474 PVGLG_RABVHSPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN HEP-FLURY) 372– 454– PRECURSOR391 474 PVGLG_RABVP SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN PV) 454–PRECURSOR 479 PVGLG_RABVS SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN SADB19) 454– PRECURSOR 479 PVGLG_RABVT SPIKE GLYCOPROTEIN RABIES VIRUS(STRAIN STREET) 454– PRECURSOR 479 PVGLG_TRTV MAJOR SURFACE TURKEYRHINOTRACHEITIS VIRUS 199– GLYCOPROTEIN G 216 PVGLG_VHSVO SPIKEGLYCOPROTEIN VIRAL HEMORMIAGIC SEPTICEMIA 406– PRECURSOR VIRUS (STRAIN07-71) 428 PVGLH_HCMVA GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 211– 365–574– 691– PRECURSOR (STRAIN AD169) 237 382 598 712 PVGLH_HCMVTGLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 210– 364– 573– 690– PRECURSOR(STRAIN TOWNE) 236 381 597 711 PVGLH_HSVII GLYCOPROTEIN H HERPES SIMPLEXVIRUS (TYPE 245– 443– 803– PRECURSOR 1/STRAIN 17) 262 467 827PVGLH_HSV1E GLYCOPROTEIN H HERPES SIMPLEX VIRUS (TYPE 245– 443– 803–PRECURSOR 1/STRAIN HFEM) 262 467 827 PVGLH_HSV6G GLYCOPROTEIN H HERPESSIMPLEX VIRUS (TYPE 314– PRECURSOR 6/STRAIN GS) 332 PVGLH_HSVE4GLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 4 304– 814– PRECURSOR (STRAIN1942) 325 839 PVGLH_HSVEB GLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 1 297–807– PRECURSOR (STRAIN AB4P) and (ISOLATE 318 832 HVS25A) PVGLH_HSVSAGLYCOPROTEIN H HERPES VIRUS SAIMIRI (STRAIN II) 454– 658– PRECURSOR 479679 PVGLH_MCMVS GLYCOPROTEIN H MURINE CYTOMEGALOVIRUS 670– PRECURSOR(STRAIN SMITH) 690 PVGLI_HCMVA IE GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS158– PRECURSOR (STRAIN AD169) 180 PVGLI_HSVII GLYCOPROTEIN 1 HERPESSIMPLEX VIRUS (TYPE  43– 1/STRAIN 17) 60 PVGLI_HSVEB GLYCOPROTEIN 1EQUINE HERPESVIRUS TYPE 1  44– PRECURSOR 63 PVGLI_VZVD GLYCOPROTEIN 1VARICELLA-ZOSTER VIRUS 278– (STRAIN DUMAS) 297 PVGLM_BUNGE M POLYPROTEINBUNYAVIRUS GERMISTON 117– 197– PRECURSOR 136 222 PVGLM_BUNL7 MPOLYPROTEIN BUNYAVIRUS LA CROSSE (ISOLATE  31–  81– 190– 1325–  1317–PRECURSOR L74) 55 98 211 1345 1410 PVGLM_BUNSH M POLYPROTEIN BUNYAVIRUSSNOWSHOE HARE  31–  81– 190– 1325–  1317– PRECURSOR 55 98 211 1345 1410PVGLM_BUNYW M POLYPROTEIN BUNYAMWERA VIRUS 193– 1379–  PRECURSOR 2181404 PVGLM_DUGBV M POLYPROTEIN DUGBE VIRUS PRECURSOR PVGLM_HANTB MPOLYPROTEIN HANTAAN VIRUS (STRAIN B-1) 355– 692– 900– 999– PRECURSOR 371717 915 1019 PVGLM_HANTH M POLYPROTEIN HANTAAN VIRUS (STRAIN HOJO) 499–694– 1000–  PRECURSOR 515 711 1020 PVGLM_HANTU M POLYPROTEIN HANTAANVIRUS (STRAIN LEE) 499– 694– 1001–  PRECURSOR 515 719 1021 PVGLM_HANTV MPOLYPROTEIN HANTAAN VIRUS (STRAIN 76-118) 499– 694– 1001–  PRECURSOR 515719 1021 PVGLM_INSV M POLYPROTEIN IMPATIENS NECROTIC SPOT VIRUS  18–269– 348– 531–  815– PRECURSOR (INSV) 44 293 367 551 841 PVGLM_PHV MPOLYPROTEIN PROSPECT HILL VIRUS 152– PRECURSOR 171 PVGLM_PTTV MPOLYPROTEIN PUNTA TORO PHLEBOVIRUS 743– 997– 1275–  PRECURSOR 765 10161302 PVGLM_PUUMH M POLYPROTEIN PUUMALA VIRUS 155– 509– 712– PRECURSOR(STRAIN HALLNAS B1) 174 525 729 PVGLM_PUUMS M POLYPROTEIN PUUMALA VIRUS155– 509– 712– 1092–  PRECURSOR (STRAIN SOTKAMO) 174 525 729 1117PVGLM_RVTV M POLYPROTEIN RIFT VALLEY FEVER VIRUS  53– 344– 130–PRECURSOR 80 368 156 PVGLM_RVFVZ M POLYPROTEIN RIFT VALLEY FEVER VIRUS 53– 344– 830– 1156–  PRECURSOR (STRAIN ZH-548 M12) 80 368 856 1176PVGLM_SEOU8 M POLYPROTEIN SEOUL VIRUS (STRAIN 80-39) 355– 692– 900– 999–PRECURSOR 371 717 915 1019 PVGLM_SEOUR M POLYPROTEIN SEOUL VIRUS (STRAINR22) 355– 693– 901– 1000–  PRECURSOR 371 718 916 1020 PVGLM_SEOUS MPOLYPROTEIN SEOUL VIRUS (STRAIN SR-11) 355– 692– 900– 999– PRECURSOR(SAPPORO RAT VIRUS) 371 717 915 1019 PVGLM_UUK M POLYPROTEIN UUKUNTEMIVIRUS 561– 655– 826– 925–  966– PRECURSOR 585 674 842 952 989 PVGLP_BEVPEPLOMER GLYCOPROTEIN BERNE VIRUS 430– 869– 1099–  1546–  PRECURSOR 452885 1124 1568 PVGLX_HSVEB GLYCOPROTEIN X EQUINE HERPESVIRUS TYPE 1PRECURSOR (STRAIN AB4P) PVGLX_HSVEK GLYCOPROTEIN GX EQUINE HERPESVIRUSTYPE 1 PRECURSOR (STRAIN KENTUCKY A) PVGLX_HSVEL GLYCOPROTEIN GX EQUINEHERPESVIRUS TYPE 1 (STRAIN KENTUCKY D) PVGLX_PRVRJ SECRETED GLYCOPROTEINGX PSEUDORADIES VIRUS 149– (STRAIN RICE) 176 PVGLY_JUN1N GLYCOPROTEINPOLYPROTEIN JUNIN ARENA VIRUS  12– PRECURSOR 38 PVGLY_LASSG GLYCOPROTEINPOLYPROTEIN LASSA VIRUS (STRAIN GA391)  12– 237– 426– PRECURSOR 38 258448 PVGLY_LASSI GLYCOPROTEIN POLYPROTEIN LASSA VIRUS (STRAIN JOSIAH) 12– 238– 427– PRECURSOR 35 259 449 PVGLY_LYCVA GLYCOPROTEIN POLYPROTEINLYMPHOCYTIC CHORLOMENINGITIS  12– PRECURSOR VIRUS (STRAIN ARMSTRONG) 35PVGLY_LYCVW GLYCOPROTEIN POLYPROTEIN LYMPHOCYTIC CHORLOMENINGITIS  12– 89– PRECURSOR VIRUS (STRAIN WE) 35 108 PVGLY_MOPEI GLYCOPROTEINPOLYPROTEIN MOPEIA VIRUS  12– 425– PRECURSOR 35 447 PVGLY_PIARVGLYCOPROTEIN POLYPROTEIN PICHINDE ARENAVIRUS  12– 441– PRECURSOR 38 466PVGLY_TACV GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS  12– PRECURSOR 38PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN V5)  12–PRECURSOR 38 PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAINV7)  12– PRECURSOR 38 PVGLY_TACVT GLYCOPROTEIN POLYPROTEIN TACARIBEVIRUS  12– PRECURSOR (STRAIN TRVL 11595) 38 PVGNB_CPMV GENOMEPOLYPROTETN B COWTEA MOSAIC VIRUS 141– 569– 757– 1110–  1165– 161 594783 1335 1184 PVGNM_CPMV GENOME POLYPROTEIN M COWPEA MOSAIC VIRUS 311–741– 335 764 PVGP2_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 657–ANTIGEN GP220 B95-8) (HUMAN HERPESVIRUS 4) 681 PVGP3_EBV ENVELOPEGLYCOPROTEIN EPSTEIN-BARR VIRUS (STRAIN 854– GP340 B95-8) (HUMANHERPUSVIRUS 4) 878 PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS(STRAIN  67– ANTIGEN GP85 B95-8) (HUMAN HERPESVIRUS 4) 88 PVGP_EBOVSTRUCTURAL GLYCOPROTEIN EBOLA VIRUS  34– 537– 653– PRECURSOR 52 561 675PVGP_MABVM STRUCTURAL GLYCOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 538–607– PRECURSOR 562 627 PVGP_MABVP STRUCTURAL GLYCOPROTEIN MARBURG VIRUS(STRAIN POPP) 538– 607– PRECURSOR 562 627 PVH01_VACCC PROTEIN-TYROSINEVACCINIA VIRUS (STRAIN  76– 105– PHOSPHATASE COPENHAGEN) 92 121PVH01_VACCV PROTEIN-TYROSINE VACCINIA VIRUS (STRAIN WR)  76– 105–PHOSPHATASE 92 121 PVH01_VARV PROTEIN-TYROSINE VARIOLA VIRUS  76– 105–PHOSPHATASE 92 121 PVH07_VACCV LATE PROTEIN H7 VACCINIA VIRUS (STRAINWR)  70– 97 PVH07_VARV LATE PROTEIN H7 VARIOLA VIRUS  70– 97 PVHEL_FXMVPROBABLE HELICASE FOXTAIL MOSAIC VIRUS 182– 205 PVHEL_PMV PROBABLEHELICASE PAPAYA MOSAIC POTEXVIRUS 153– 168 PV101_VACCC PROTEIN 11VACCINIA VIRUS (STRAIN 120– COPENHAGEN) 135 PV101_VARV PROTEIN 11VARIOLA VIRUS 120– 135 PV103_VACCC PROTEIN 13 VACCINIA VIRUS (STRAIN194– COPENHAGEN) 220 PV103_VACCV PROTEIN 13 VACCINIA VIRUS (STRAIN WR)194– 220 PV103_VARV PROTEIN 13 VARIOLA VIRUS 194– 220 PV106_VACCVPROTEIN 16 VACCINIA VIRUS (STRAIN WR) 106– 133– 128 155 PV106_VARVPROTEIN 16 VARIOLA VIRUS 106– 133– 128 155 PV107_VACCC PROTEIN 17VACCINIA VIRUS (STRAIN  13– 344– COPENHAGEN) 34 367 PV107_VACCV PROTEIN17 VACCINIA VIRUS (STRAIN WR)  13– 344– 34 367 PV107_VARV PROTEIN 17VARIOLA VIRUS  13– 344– 34 367 PV108_VACCC PUTATIVE RNA HELICASE IIVACCINIA VIRUS (STRAIN 196– 418– COPENHAGEN) 212 438 PV108_VACCVPUTATIVE RNA HELICASE II VACCINIA VIRUS (STRAIN WR) 196– 418– 212 438PV108_VARV PUTATIVE RNA HELICASE II VARIOLA VIRUS 196– 418– 212 438PVIE1_HCMVA 55 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS  77– 333–PROTEIN 1 (STRAIN AD169) 100 350 PVIE1_HCMVT 55 KD IMMEDIATE-EARLY HUMANCYTOMEGALOVIRUS  77– 333– PROTEIN I (STRAIN TOWNE) 100 350 PVIE2_HCMVA45 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS  14– 389– PROTEIN 2 (STRAINAD 169) 32 406 PVIE2_HCMVT 45 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 14– 388– PROTEIN 2 (STRAIN TOWNE) 32 405 PVIE2_MCMVS IMMEDIATE-EARLYPROTEIN MURINE CYTOMEGALOVIRUS 251– 2 (STRAIN SMITH) 272 PVIE3_HCMVT 30KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS  14– PROTEIN 2 (STRAIN TOWNE)32 PVIEG_HSVSA IMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 65– IE-G 80 PVIEN_NPVAC IMMEDIATE-EARLY REG AUTOGRAPHA CALIFORNIANUCLEAR 100– 273– PROTEIN IE-N POLYHEDROSIS VIRUS 116 290 PVIMP_EBV PROSINTEGRAL MEMBRANE EPSTEIN-BARR VIRUS  75– 125– 203– PROTEIN BBRF 3(STRAIN B95-8) 100 152 222 PVIMP_HCMVA PROBABLE INTEGRAL HUMANCYTOMEGALOVIRUS  68– 190– MEMBRANE PROTEIN (STRAIN AD 169) 89 217PVIMP_HSVI1 PROBABLE INTEGRAL HERPES SIMPLEX VIRUS (TYPE  83– 250–MEMBRANE PROTEIN 1/STRAIN 17) 110 270 PVTMP_HSVEB PROBABLE INTEGRALEQUINE HERPESVIRUS TYPE 1  24–  93– 145– 247–  301–  332– MEMBRANEPROTEIN (STRAIN AB4P) 49 120 172 263 321 358 PVIMP_HSVSA INTEGRALMEMBRANE HERPESVIRUS SAIMIRI (STRAIN 11)  76– 313– PROTEIN 101 331PVIMP_VZVD PROBABLE INTEGRAL VARICELLA-ZOSTER VIRUS  21– 154– 230–MEMBRANE PROTEIN (STRAIN DUMAS) 47 181 252 PVJ01_VACCC PROTEIN J1VACCINIA VIRUS (STRAIN  89– COPENHAGEN) 110 PVJ01_VACCV PROTEIN J1VACCINIA VIRUS (STRAIN WR)  89– 110 PVJ01_VARV PROTEIN J1 VARIOLA VIRUS 89– 110 PVK04_VACCC PROTEIN K4 VACCINIA VIRUS (STRAIN  87– 208– 319–COPENHAGEN) 113 234 337 PVK04_VACCV PROTEIN K4 VACCINIA VIRUS (STRAINWR)  87– 208– 319– 113 234 337 PVK05_VACCC PROTEIN K5 VACCINIA VIRUS(STRAIN 106– COPENHAGEN) 131 PVL02_VACCC PROTEIN L2 VACCINIA VIRUS(STRAIN  39– COPENHAGEN) 61 PVL02_VACCV PROTEIN L2 VACCINIA VIRUS(STRAIN WR)  39– 61 PVL02_VARV PROTEIN L2 VARIOLA VIRUS  39– 61PVL03_VACCC PROTEIN L3 VACCINIA VIRUS (STRAIN 148– 186– 292– COPENHAGEN)164 208 315 PVL03_VACCV PROTEIN L3 VACCINIA VIRUS (STRAIN WR) 148– 186–292– 164 208 315 PVL03_VARY PROTEIN L3 VARIOLA VIRUS 147– 185– 291– 163207 314 PVL05_VACCV PROTEIN L5 VACCINIA VIRUS (STRAIN WR),  16– AND(STRAIN COPENHAGEN) 39 PVL05_VARV PROTEIN L5 VARIOLA VIRUS  16– 39PVLI_CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 299–PAPILLOMAVIRUS (STRAIN KANSAS) 317 PVLI_HPVIS PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 18  28– 55 PVLI_WV4I PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41  38– 63 PVLI_PJEOVD MAJOR CORE PROTEIN REOVIRUS(TYPE 3/STRAIN DEARING) 327– 351– 752– LAMBDA 1 346 366 774 PVL2_HPV08PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 254– 270 PVL2_HPV11PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11  32– 58 PVL2_HPV13PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13  33– 59 PVL2_KPV16PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYTE 16  34– 60 PVL2_HPV18PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18  33– 59 PVL2_HPV1APROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 213– 228 PVL2_HPV2APROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A  88– 114 PVL2_HPV31PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31  34– 443– 60 462PVL2_HPV33 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33  33–  99– 59114 PVL2_KPV35 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35  34– 60PVL2_HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41  32– 414– 58436 PVL2_HPV42 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42  33–344– 59 370 PVL2_HPV47 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47250– 265 PVL2_HPV57 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 32– 58 PVL2_HPV58 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58  33– 99– 59 114 PVL2_HPV6B PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 33– 59 PVL2_PAPVE PROBABLE L2 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS  30–56 PVL2_RHPVI PROBABLE L2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1  45– 71PVL3_HPV5B PROBABLE L3 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  6– 28PVL3_REOVD MINOR CORE PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING 714–LAMBDA 3 737 PVL3_REIVJ MINOR CORE PROTEIN REOVIRUS (TYPE 2/STRAIN D5/714– 1213–  LAMBDA 3 JONES) 737 1236 PVL3_REOVL MINOR CORE PROTEINREOVIRUS (TYPE 1/STRAIN LANG) 714– LAMBDA 3 737 PVL96_IRVI L96 PROTEINTIPULA IRIDESCENT VIRUS (TIV) 144– 196– 686– 845– (INSECT IRIDESCENTVIRUS TYPE 170 220 711 861 1) PVM01_VACCC PROTEIN M1 VACCINIA VIRUS(STRAIN 134– 177– 281– COPENHAGEN) 159 195 302 PVM01_VACCV PROTEIN M1VACCINIA VIRUS (STRAIN WR)  81– 126– 210– 108 144 251 PVM01_VARV PROTEINM1 VARIOLA VIRUS  81– 124– 228– 106 142 249 PVM1_REOVD MINOR VIRIONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN 141– 227– 280– 324–  414–  454–PROTEIN MU-1 DEARING) 168 245 304 347 436 477 PVM1_REOVL MINOR VIRIONSTRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 141– 227– 280– 414–  454–PROTEIN MU-2 168 245 304 436 477 PVM21_REOVD MAJOR VIRION STRUC REOVIRUS(TYPE 3/STRAIN 168– PROTEIN MU-1/MU-1C DEARING) 192 PVM22_REOVD MAJORVIRION STRUCT REOVIRUS (TYPE 3/STRAIN 168– PROTEIN MU-1/MU-1C DEARING)192 PVM2_REOVJ MAJOR VIRION STRUC REOVIRUS (TYPE 2/STRAIN D5/ 168–PROTEIN MU-1/MU-1C JONES) 192 PVM2_REOVL MAJOR VIRION STRUC REOVIRUS(TYPE 1/STRAIN LANG) 168– PROTEIN MU-1/MU-1C 192 PVM3_REOVD MAJORNONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN 304– 521– PROTEIN MU-NS DEARING)326 540 PVMAT_BRSVA MATRIX PROTEIN BOVINE RESPIRATORY SYNCYTIAL  37–VIRUS (STRAIN AS1908) 62 PVMAT_CDVO MATRIX PROTEIN CANINE DISTEMPERVIRUS 148– 283– (STRAIN ONDERSTEPOORT) 165 309 PVMAT_HRSVA MATRIXPROTEIN HUMAN RESPRATORY SYNCYTIAL  44– 139– VIRUS (STRAIN A2) 62 160PVMAT_LPMV MATRIX PROTEIN LA PIEDAD-MICHOACAN-MEXICO 311– VIRUS 338PVMAT_MEASE MATRIX PROTEIN MEASLES VIRUS (STRAIN EDMONSTON) 283– 309PVMAT_MEASH MATRIX PROTEIN MEASLES VIRUS (STRAIN HALLE) 283– 309PVMAT_MEASI MATRIX PROTEIN MEASLES VIRUS (STRAIN 1P-3-CA)  87– 111PVMAT_MEASU MATRIX PROTEIN MEASLES VIRUS (STRAIN HU2) 253– 309PVMAT_MUMPI MATRIX PROTEIN MUMPS VIRUS (STRAIN SBL-I) 191– 227– 310– 207250 330 PVMAT_MUMPS MATRIX PROTEIN MUMPS VIRUS (STRAIN SBL) 191– 227–310– 207 250 330 PVMAT_NDVA MATRIX PROTEIN NEWCASTLE DISEASE VIRUS 135–190– 309– (STRAIN AUSTRALIA-VICTORIA/32) 151 208 329 PVMAT_NDVB MATRIXPROTEIN NEWCASTLE DISEASE VIRUS 135– 190– 309– (STRAIN BEAUDETTE C/45)151 201 329 PVMAT_PHHC MATRIX PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 195–(STRAIN C39) 217 PVMAT_PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2 VIRUS132– 189– 308– (STRAIN TOSHIBA) (PIV-2) 154 205 328 PVMAT_PI4HA MATRIXPROTEIN HUMAN PARAINFLUENZA 4A VIRUS 312– (STRAIN TOSHIBA) (PIV-4A) 332PVMAT_PI4HB MATRIX PROTEIN HUMAN PARAINFLUENZA 4B VIRUS 312– (STRAIN68-333) (PIV-4B) 332 PVMAT_RINDK MATRIX PROTEIN RINDERPEST VIRUS 200–239– 283– (STRAIN KABRTE O) 221 260 309 PVMAT_SENDF MATRIX PROTEINSENDAI VIRUS 195– (STRAIN FUSHIMI) 217 PVMAT_SENDH MATRIX PROTEIN SENDAIVIRUS (STRAIN KARRIS) 195– 217 PVMAT_SENDZ MATRIX PROTEIN SENDAI VIRUS(STRAIN Z) 195– 217 PVMAT_SSPVB MATRIX PROTEIN SUBACUTE SCLEROSING 283–314– PANENCEPHALITIS VIRUS 309 338 (STRAIN BIKEN) PVMAT_SV41 MATRIXPROTEIN SIMIAN VIRUS 41 132– 189– 308– 154 205 328 PVMAT_SV5 MATRIXPROTEIN SIMIAN VIRUS 5 (STRAIN W3)  98– 132– 308– 114 148 335 PVMAT_SVCVMATRIX PROTEIN SPRINO VIREMIA OF CARP VIRUS 141– (RHABDOVIRUS CARPIA)167 PVMAT_TRTV MATRIX PROTEIN TURKEY RHINOTRACHEITIS VIRUS 122– 143PVMEI_CVBM E1 GLYCOPROTEIN BOVINE CORONAVIRUS  9– 137– 171– (STRAINMEBUS) 36 161 190 PVMEI_CVH22 E1 GLYCOPROTEIN HUMAN CORONAVIRUS 136–(STRAIN 229E) 155 PVMEI_CVHOC E1 GLYCOPROTEIN HUMAN CORONAVIRUS  9–  64–137– (STRAIN OC43) 36 85 161 PVMEI_CVMA5 E1 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN  10– A59) 37 PVMEI_CVMJH E1 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN  10– JHM) 37 PVMEI_CVPFS E1 GLYCOPROTEIN PORCINETRANSMISSIBLE 174– PRECURSOR GASTROENTERITIS CORONAVIRUS 193 (STRAIPVMEI_CVPPU E1 GLYCOPROTEIN PORCINE TRANSMISSIBLE 169– 174– PRECURSORGASTROENTERITIS CORONAVIRUS 193 193 (STRAI PVMEI_CVPRM E1 GLYCOPROTEINPORCINE RESPIRATORY CORONAVIRUS 174– PRECURSOR (STRAIN RM4) 193PVMEI_CVTKE E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS  9– 137– 171– 36161 190 PVMEI_IBV6 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS  74–VIRUS (STRAIN 6/82) 98 PVMEI_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS  74– VIRUS (STRAIN BEAUDETTE) 101 PVMEI_IBVB2 E1 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS  74– VIRUS (STRAIN BEAUDETTE M42) 101PVMEI_IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS  74– VIRUS(STRAIN KB8523) 98 PVMEM_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS 131–178– PROTEIN (STRAIN B95-8) 157 203 PVMP_CAMVC MOVEMENT PROTEINCAULIFLOWER MOSAIC VIRUS 118– 147– 183– (STRAIN CM-1841) 134 164 201PVMP_CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118– 147– 183–(STRAIN D/H) 134 164 201 PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAICVIRUS 118– 147– 183– (STRAIN BBC) 134 164 201 PVMP_CAMVN MOVEMENTPROTEIN CAULIFLOWER MOSAIC VIRUS 118– 147– 183– (STRAIN NY8153) 134 164201 PVMP_CAMVS MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118– 147– 183–(STRAIN STRASBOURG) 134 164 201 PVMP_CAMVW MOVEMENT PROTEIN CAULIFLOWERMOSAIC VIRUS 118– 147– 183– (STRAIN W260) 134 164 201 PVMP_CERV MOVEMENTPROTEIN CARNATION ETCHED RING VIRUS 293– 318 PVMP_FMVD MOVEMENT PROTEINFIGWORT MOSAIC VIRUS 115– 180– (STRAIN DXS) 131 198 PVMP_SOCMV MOVEMENTPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 122– 273– 147 299 PVMSA_HPBDBMAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS (BROWN 201– 269– PRECURSORSHANGHAI DUCK ISOLATE 55) 228 295 PVMSA_HPBDC MAJOR SURFACE ANTIGEN DUCKHEPATITIS B VIRUS 194– 268– PRECURSOR (STRAIN CHINA) 221 294 PVMSA_HPBDUMAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 157– 231– PRECURSOR 184 257PVMSA_HPBDW MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS (WHITE 194–269– PRECURSOR SHANGHAI DUCK ISOLATE S31) 221 295 PVMSA_HPBGS MAJORSURFACE ANTIGEN GROUND SQUIRREL HEPATITIS VIRUS 209– 271– 380– PRECURSOR236 295 395 PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS236– 293– PRECURSOR 262 320 PVMSA_HPBV0 MAJOR SURFACE ANTIGEN HEPATITISB VIRUS 11– 70– 28 96 PVMSA_HPBV2 MAJOR SURFACE ANTIGEN HEPATITIS BVIRUS (SUBTYPE 185– 244– PRECURSOR ADW2) 202 270 PVMSA_HPBV4 MAJORSURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE 185– 244– PRECURSOR ADR4) 202270 PVMSA_HPBV9 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE 244–PRECURSOR ADW/STRAIN 991) 270 PVMSA_HPBVA MAJOR SURFACE ANTIGENHEPATITIS B VIRUS (STRAIN 174– 233– PRECURSOR ALPHA 1) 191 259PVMSA_HPBVD MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE AD) 11– 70–28 96 PVMSA_HPBVI MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE 233–PRECURSOR ADW/STRAIN INDONESIA/PIDW420) 259 PVMSA_HPBVJ MAJOR SURFACEANTIGEN HEPATITIS B VIRUS (SUBTYPE 174– 233– PRECURSOR ADW/STRAINJAPAN/PJDW233) 191 259 PVMSA_HPBVL MAJOR SURFACE ANTIGEN HEPATITIS BVIRUS (STRAIN 174– 233– PRECURSOR LSH/CHIMPANZEE ISOLATE 191 259PVMSA_HPBVN MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE 11– 70–ADR/STRAIN NC-I) 28 96 PVMSA_HPBVO MAJOR SURFACE ANTIGEN HEPATITIS BVIRUS (SUBTYPE 174– 233– PRECURSOR ADW/STRAIN OKINAWA/PODW282) 191 259PVMSA_HPBVP MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUDTYPE 185– 244–PRECURSOR ADW/STRAIN PHILIPPINO/PFDW294) 202 270 PVMSA_KPBVR MAJORSURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADR) 185– 244– PRECURSOR 202270 PVMSA_KPBVS MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE AR) 11–70– 28 96 PVMSA_HPBVW MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPEADW) 174– 233– PRECURSOR 191 259 PVMSA_KPBVY MAJOR SURFACE ANTIGENHEPATITIS B VIRUS (SUBTYPE AYW) 174– 233– PRECURSOR 191 259 PVMSA_HPBVZMAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADYW) 174– 233–PRECURSOR 191 259 PVMSA_WHVI MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITISVIRUS 1 207– 269– 378– PRECURSOR 234 293 393 PVMSA_WHV59 MAJOR SURFACEANTIGEN WOODCHUCK HEPATITIS VIRUS 59 212– 274– 383– PRECURSOR 239 298398 PVMSA_WHV7 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 7 212–274– 383– PRECURSOR 239 298 398 PVMSA_WHV8 MAJOR SURFACE ANTIGENWOODCHUCK HEPATITIS VIRUS 8 212– 274– 383– PRECURSOR 239 298 398PVMSA_WHV81 PROD MAJOR SURFACE WOODCHUCK HEPATITIS VIRUS 8 212– 274–383– ANTIGEN PREC (INFECTIOUS CLONE) 239 298 398 PVMSA_WHVW6 MAJORSURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS W64 125– 234– PRECURSOR(ISOLATE PWS23) 149 249 PVMT2_IAANN MATRIX (M2) PROTEIN INFLUENZA AVIRUS (STRAIN 25– A/ANN ARBOR/6/60) 46 PVMT2_IABAN MATRIX (M2) PROTEININFLUENZA A VIRUS (STRAIN 25– A/BANGKOK/1/79) 46 PVMT2_IAFOW MATRIX (M2)PROTEIN INFLUENZA A VIRUS (STRAIN 25– A/FORT WARREN/1/50) 46 PVMT2_1AFPRMATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN 25– A/FOWL PLAGUEVIRUS/ROSTOCK/34) 46 PVMT2_1AFPW MATRIX (M2) PROTEIN INFLUENZA A VIRUS(STRAIN 25– A/FOWL PLAGUE VIRUS/WEYBRIDGE) 46 PVMT2_IALE1 MATRIX (M2)PROTEIN INFLUENZA A VIRUS (STRAIN 25– A/LENINGRAD/134/57) 46 PVMT2_IALE2MATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN 25– A/LENINGRAD/134/17/57)46 PVMT2_IAMAN MATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN 25–A/MALLARD/NEW YORK/6750/78) 46 PVMT2_IAPUE MATRIX (M2) PROTEIN INFLUENZAA VIRUS (STRAIN 25– A/PUERTO RICO/8/34) 46 PVMT2_lASIN MATRIX (M2)PROTEIN INFLUENZA A VIRUS (STRAIN 25– A/SINGAPORE/1/57) 46 PVMT2_IAUDOMATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN 25– A/UDORN/307/72) 46PVMT2_IAWIL MATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN 25–WILSON-SMITH/33) 46 PVMT9_MYXVL MT-9 PROTEIN MYXOMA VIRUS 226– (STRAINLAUSANNE) 241 PVN34_ROTBS NONSTRUCTURAL PROTEIN BOVINE ROTAVIRUS (GROUP334– N534 C/STRAIN SHINTOKU) 351 PVNBP_PVSP 10 7 KD PROTEIN POTATO VIRUSS (STRAIN 21– PERUVIAN) 36 PVNB_INBBE NO GLYCOPROTEIN INFLUENZA B VIRUS(STRAIN 13– B/BEIJING/1/87) 39 PVNB_INBHK NB GLYCOPROTEIN INFLUENZA BVIRUS (STRAIN 13– B/HONG KONG/5/73) 39 PVNB_INBLE NB GLYCOPROTEININFLUENZA B VIRUS (STRAIN 13– B/LEE/40) 39 PVNB_INBLN NB GLYCOPROTEININFLUENZA B VIRUS (STRAIN 13– B/LENINGRAD/179/86) 39 PVNB_INBMD NBGLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13– B/MARYLAND/59) 39 PVNB_INBMFNB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13– B/MEMPHIS/3/89) 39PVNB_INBOR NB GLYCOPROTEIN INFLUENZA B VIRUS (STRAIN 13– B/OREGON/5/80)39 PVNCS_ADVG NONCAPSID PROTEIN NS-1 ALEUTIAN MINK DISEASE 81– 169–PARVOVIRUS (STRAIN G) 96 190 PVNCS_AEDEV NONCAPSID PROTEIN NS-1 AEDESDENSONUCLEOSIS VIRUS 675– (STRAIN GKV 002 002) (AEDES 690 DENSPVNCS_PAVHB NONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 575– 597PVNCS_PAVHH NONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 140– 165PVNS1_AHSV4 NONSTRUCTURAL PROTEIN AFRICAN HORSE SICKNESS VIRUS 256– NS1(SEROTYPE 4/STRAIN VACCINE) 272 PVNS1_IAALA NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 31– 114– 167– NS1 A/ALASKA/6/77) 50 137 192PVNS1_IAANN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 114–167– NS1 A/ANN ARBOR/6/60) 50 137 192 PVNS1_IACAO NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 19– NS1 A/CAMEL/MONGOLIA/82) 38 PVNS1_IACH1NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 114– 167– NS1A/CHILE/1/83) 50 137 192 PVNS1_IACKG NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS (STRAIN 31– 167– NS1 A/CHICKEN/GERMANY/N/49) 50 192 PVNS1_IACKJNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 28– 164– NS1A/CHICKEN/JAPAN/24) 47 189 PVNS1_IADA2 NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS (STRAIN 31– 167– NS1 A/DUCK/ALBERTA/60/76) 530 192 PVNS1_IADE1NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 28– 164– NS1A/DUCK/ENGLAND/1/56) 47 189 PVNS1_IADU3 NONSTRUCTURAL PROTEIN INFLUENZAA VIRUS (STRAIN 28– 164– NS1 A/DUCK/UKRAINE/1/63) 47 189 PVNS1_IAFOMNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 114– 167– NS1 A/FORTMONMOUTH/1/47) 50 137 192 PVNS1_IAFOW NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS (STRAIN 31– 114– 161– NS1 A/FORT WARREN/1/50), AND 50 137 192(STRAIN A/ PVNS1_IAFPR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN31– 167– NS1 A/FOWL PLAGUE VIRUS/ROSTOCK/34) 50 192 PVNS1_IALE1NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 114– 167– NS1A/LENINGRAD/134/57) 50 137 192 PVNS1_IALEN NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 31– 114– 167– NS1 A/LENINGRAD/54/1) 50 137 192PVNS1_IAMA6 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 167– NS1A/MALLARD/ALBERTA/88/76) 50 192 PVNS1_IAMAN NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 31– 167– NS1 A/MALLARD/NEW YORK/6750/78) 50192 PVNS1_IAMAO NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 167–NS1 A/MALLARD/NEW YORK/6874/78) 50 192 PVNS1_IAMVN NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 28– 164– NS1 A/MYNAH/HANEDA-THAI/76) 47 189PVNS1_IAP10 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 167– NS1A/PINTAIL/ALBERTA/119/79) 192 PVNS1_IAP11 NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 31– 167– NS1 A/PINTAIL/ALBERTA/121/79) 50 192PVNS1_IAP12 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 167– NS1A/PINTAIL/ALBERT A/268/78) 50 192 PVNS1_IAP13 NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 31– 167– NS1 A/PINTAIL/ALBERTA/351/79) 50 192PVNS1_IAPUE NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 114–167– NS1 A/PUERTO RICO/8/34) 50 137 192 PVNS1_IATKB NONSTRUCTURALPROTEIN INFLUENZA A VIRUS (STRAIN 31– 167– NS1 A/TURKEY/BETHLEHEM- 50192 GLILIT/1492-B/ PVNS1_IATKC NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS(STRAIN 31– 167– NS1 A/TURKEY/CANADA/63) 50 192 PVNS1_IATKRNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– NS1A/TURKEY/OREGON/71) 50 PVNS1_IATRS NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS (STRAIN 28– 164– NS1 A/TERN/SOUTH AFRICA/61) 47 189 PVNS1_IATRTNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 167– NS1A/TERN/TURKMENIA/18/72) 50 192 PVNS1_IAUDO NONSTRUCTURAL PROTEININFLUENZA A VIRUS 31– 114– 167– NS1 (STRAIN A/UDORN/307/72) 50 137 192PVNS1_IAUSS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 31– 114–167– NS1 A/USSR/90/77) 50 137 192 PVNS1_IAZI1 NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 31– 167– NS1 A/SWINE/IOWA/15/30) 50 192PVNS1_INCAA NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS 222– NS1 (STRAINC/ANN ARBOR/1/50) 248 PVNS1_INCCA NONSTRUCTURAL PROTEIN INFLUENZA CVIRUS 222– NS1 (STRAIN C/CALIFORNIA/78) 248 PVNS2_BTV10 NONSTRUCTURALPROTEIN BLUETONGUE VIRUS (SEROTYPE 145– 201– NS2 10/ISOLATE USA) 161 223PVNS2_BTV17 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145– 201–NS2 17/ISOLATE USA) 161 223 PVNS2_BTVIS NONSTRUCTURAL PROTEIN BLUETONGUEVIRUS (SEROTYPE 145– NS2 1/ISOLATE SOUTH AFRICA) 161 PVNS2_BTVIXNONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 10) 145– NS2 161PVNS2_EHDV2 NONSTRUCTURAL PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE 145– NS2VIRUS (SEROTYPE 2/STRAIN AL 161 PVNS2_IAPUE NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN 3– NS2 A/PUERTO RICO/8/34) 28 PVNS2_IATRSNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN 56– NS2 A/TERN/SOUTHAFRICA/61) 80 PVNS2_PVM NONSTRUCTURAL PROTEIN PNEUMONIA VIRUS OF MICE52– 2 68 PVNS3_CVPFS NONSTRUCTURAL PROTEIN PORCINE TRANSMISSIBLE 177–3-1 GASTROENTERITIS CORONAVIRUS 201 (STRAI PVNS3_CVPPU NONSTRUCTURALPROTEIN PORCINE TRANSMISSIBLE 98– 3-1 GASTROENTERITIS CORONAVIRUS 122(STRAI PVNS3_CVPRM NONSTRUCTURAL PROTEIN PORCINE RESPIRATORY CORONAVIRUS177– 3-1 (STRAIN RM4) 201 PVNS3_RSV NONSTRUCTURAL PROTEIN RICE STRIPEVIRUS 16– NS3 40 PVNS4_CVH22 NONSTRUCTURAL PROTEIN HUMAN CORONAVIRUS 84–4 (STRAIN 229E) 100 PVNS4_CVMS NONSTRUCTURAL PROTEIN MURINE CORONAVIRUSMHV (STRAIN 17– 4 S) 38 PVNS4_CVPFS NONSTRUCTURAL PROTEIN PORCINETRANSMISSIBLE 4– 4 GASTROENTERITIS CORONAVIRUS 31 (STRAI PVNS4_CVPPUNONSTRUCTURAL PROTEIN PORCINE TRANSMISSIBLE 4– 4 GASTROENTERITISCORONAVIRUS 31 (STRAI PVNS4_CVPRM NONSTRUCTURAL PROTEIN PORCINERESPIRATORY CORONAVIRUS 4– 4 (STRAIN RM4) 31 PVNS4_MSTV NONSTRUCTURALPROTEIN MAIZE STRIPE VIRUS 41– NS4 56 PVNS4_RSV NONSTRUCTURAL PROTEINRICE STRIPE VIRUS 41– 60– 152– NS4 56 82 167 PVNS7_CVFE3 NONSTRUCTURALPROTEIN FELINE ENTERIC CORONAVIRUS 59– 7 (STRAIN 79-1683) 84 PVNS7_FIPVNONSTRUCTURAL PROTEIN FELINE INFECTIOUS PERITONITIS 59– 7 VIRUS (STRAIN79-1146) 84 PVNSC_PIIHB NONSTRUCTURAL PROTEIN HUMAN PARAINFLUENZA 1VIRUS 76– C (STRAIN C35) 92 PVNSC_PIIHC NONSTRUCTURAL PROTEIN HUMANPARAINFLUENZA 1 VIRUS 76– C (STRAIN C39) 92 PVNSC_PIIHD NONSTRUCTURALPROTEIN HUMAN PARAINFLUENZA 1 VIRUS 76– 179– C (STRAIN CI-5/73) 92 197PVNSC_PIIHE NONSTRUCTURAL PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 76– C(STRAIN CI-14/83) 92 PVNST_CVBQ 31 KD NONSTRUCTURAL BOVINE CORONAVIRUS88– PROTEIN (STRAIN QUEBEC) 109 PVNST_INCGL NONSTRUCTURAL PROTEINSINFLUENZA C VIRUS 222– NSI-NS2 (STRAIN C/GREAT LAKES/1167/54) 248PVNST_INCJH NONSTRUCTURAL PROTEINS INFLUENZA C VIRUS 222– NSI-NS2(STRAIN C/JOHANNESBURG/1/66) 248 PVNST_INCMI NONSTRUCTURAL PROTEINSINFLUENZA C VIRUS 222– NSI-NS2 (STRAIN C/MISSISSIPPI/80) 248 PVNST_INCYANONSTRUCTURAL PROTEINS INFLUENZA C VIRUS 222– NSI-NS2 (STRAINC/YAMAGATA/10/81) 248 PVNST_PTPV NONSTRUCTURAL PROTEIN PUNTA TOROPHLEBOVIRUS 48– NS-S 63 PVNST_SFSV NONSTRUCTURAL PROTEIN SANDFLY FEVERSICILIAN VIRUS 16– NS-S 34 PVNST_UUK NONSTRUCTURAL PROTEIN UUXUNTEMIVIRUS 52– 89– NS-S 73 104 PVNUA_PRVKA PROBABLE NUCLEAR PSEUDORABIESVIRUS 756– 1563– ANTIGEN (STRAIN KAPLAN) 777 1583 PVNUC_DHV11NUCLEOPROTEIN DHORI VIRUS 123– 297– (STRAIN INDIAN/1313/61) 139 324PVNUC_EBOV NUCLEOPROTEIN EBOLA VIRUS 159– 176 PVNUC_IAANA NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– 266– A/ANAS ACUTA/PRIMORJE/695/76) 197287 PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/ANNARBOR/6/60) 197 PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/BRAZIL/11/78) 197 PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173– A/BUDGERIGAR/HOKKAIDO/1/77) 197 PVNUC_IACAL NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN 173– A/CALIFORNIA/10/78) 197 PVNUC_IACKG NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/CHICKEN/GERMANY/N/49) 197 PVNUC_IACXPNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/CHICKEN/PENNSYLVANIA/1/83) 197 PVNUC_IADAU NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173– A/DUCK/AUSTRALIA/740/80 197 PVNUC_1ADBE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/DUCK/BEIJING/1/78) 197 PVNUC_IADCZNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/DUCK/CZECHOSLOVAKIA/56)197 PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/DUCK/ENGLAND/1/56) 197 PVNUC_IADE3 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/DUCK/ENGLAND/1/62) 197 PVNUC_IADHK NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/DUCK/HONG KONG/7/75) 197 PVNUC_IADM2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/DUCK/MEMPHIS/28/74) 197PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/DUCK/MANITOBA/1/53) 197 PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/DUCK/NEW ZEALAND/31/76) 197 PVNUC_IADU2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/DUCK/UKRAINE/2/60) 197 PVNUC_IAEN5NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/ENGLAND/ 19/55) 197PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/FORTMONMOUTH/1/47) 197 PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173– A/FORT WARREN/1/50) 197 PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/FOWL PLAGUE VIRUS/DODSON/DUTC 197 PVNUC_IAFPRNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/FOWL PLAGUEVIRUS/ROSTOCK/34) 197 PVNUC_IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/GREY TEAL/AUSTRALIA/2/79) 197 PVNUC_IAGU1 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/GULL/MARYLAND/5/77) 197 PVNUC_IAGU2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/GULL/MARYLAND/704/77) 197PVNUC_IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/GULL/MARYLAND/IS24/78) 197 PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/GULL/MARYLAND/1815/79) 197 PVNUC_IAGUA NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/GULL/ASTRAKHAN/227/84) 197 PVNUC_IAGUMNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/GULL/MASSACHUSETTS/26/80)197 PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/GULL/MINNESOTA/945/80) 197 PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/HICKOX/40) 197 PVNUC_IAHJ1 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173– A/EQUINE/JILLIN/1/89) 197 PVNUC_IAHLO NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/EQUINE/LONDON/1416/73) 197 PVNUC_IAHM1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/EQUINE/MIAM1/1/63) 197PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/HONGKONG/1/68) 197 PVNUC_IAH02 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/HONG KONG/5/83) 197 PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/EQUINE/PRAGUE/1/56) 197 PVNUC_IAHTE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/EQUINE/TENNESSEE/5/86) 197 PVNUC_IAKIENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/KIEV/59/79) 197PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/LENINGRAD/54/1) 197 PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/MALLARD/ASTRAKHAN/244/82) 197 PVNUC_IAMAN NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/MALLARD/NEW YORK/6750/78) 197PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/MINK/SWEDEN/84) 197 PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/NT/60/68) 197 PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/OHIO/4/83) 197 PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173– A/PARROT/ULSTER/73) 197 PVNUC_IAPUE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/PUERTO RICO/8/34) 197 PVNUC_IARUDNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/RUDDY TURNSTONE/NEWJERSEY/ 197 47/ PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/SEAL/MASSACHUSETTS/1/80) 197 PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173– A/SHEARWATER/AUSTRALIA/72) 197 PVNUC_IASINNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SINGAPORE/1/57) 197PVNUC_IATEI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/TEAL/ICELAND/29/80) 197 PVNUC_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/TURKEY/MINNESOTA/1661/81) 197 PVNUC_IATKO NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/TURKEY/ONTARIO/7732/66) 197 PVNUC_IATRSNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/TERN/SOUTH AFRICA/61) 197PVNUC_IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/TERM/TURKMENIA/18/72) 197 PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/TEXAS/1/77) 197 PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173– A/UDORN/307/12) 197 PVNUC_IAUSS NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/USSR/90/77) 197 PVNUC_IAVI6NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/VICTORIA/6/68) 197PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/WHALE/MAINE/328/84) 197 PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/WHALE/PACIFIC OCEAN/19/76) 197 PVNUC_MWIL NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/WILSON-SMITH/33) 197 PVNUC_IAZ29NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SWINE/29/37) 197PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SWINE/41/49)197 PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/SWINE/CAMBRIDGIVI/Ji) 197 PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/SWINE/DANDONG/OT)) 197 PVNUC_IAZGE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/SWINE/GERMANY/I/SI) 197 PVNUC_IAZH1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SWINE/KONG KONG/6/76) 197PVNUC_IA2H3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SWINE/HONGKONG/126/82) 197 PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173– A/SWINE/IOWA/15/30) 197 PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/SWINE/IOWA/1976/31) 197 PVNUC_IAZI3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173– A/SWINE/IOWA/46) 197 PVNUC_IAZI4NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SWINE/ITALY/839/89) 197PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/SWINE/JAMESBURG/42) 197 PVNUC_IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/SWINE/MAY/54) 197 PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173– A/SWINE/NETHERLANDS/12/85) 197 PVNUC_IAZOHNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173– A/SWINE/OHIO23/35) 197PVNUC_IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173–A/SWINE/WISCONSIN/1/57) 197 PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173– A/SWINE/WISCONSIN/1/61) 197 PVNUC_INBAC NUCLEOPROTEININFLUENZA B VIRUS (STRAIN 234– B/ANN ARBOR/1/66 [COLD- 258 ADAPTED])PVNUC_INBAD NUCLEOPROTEIN INFLUENZA B VIRUS (STRAIN 234– B/ANNARBOR/1/66 [WILD- 258 TYPE]) PVNUC_1NBLE NUCLEOPROTEIN INFLUENZA B VIRUS(STRAIN 234– B/LEE/40) 258 PVNUC_INBSI NUCLEOPROTEIN INFLUENZA B VIRUS(STRAIN 234– B/SINGAPORE/222/79) 258 PVNUC_MABVM NUCLEOPROTEIN MARBURGVIRUS (STRAIN MUSOKE) 16– 141– 39 158 PVNUC_MABVP NUCLEOPROTEIN MARBURGVIRUS (STRAIN POPP) 16– 141– 39 158 PVO01_VACCC PROTEIN O1 VACCINIAVIRUS (STRAIN 189– 242– 336– COPENHAGEN) 204 262 358 PVO01_VARV PROTEINO1 VARIOLA VIRUS 189– 242– 336– 204 262 358 PVORI_FXMV 152 KD PROTEINFOXTAIL MOSAIC VIRUS 846– 865 PVORI_NMV 186 KD PROTEIN NARCISSUS MOSAICVIRUS 409– 990– 424 1010 PVORI_PVMR 223 KB PROTEIN POTATO VIRUS M(STRAIN RUSSIAN) 87– 986– 1251– 1893– 104 1009 1270 1909 PVORI_PVSP 223KD PROTEIN POTATO VIRUS S (STRAIN 279– PERUVIAN) 295 PVORI_PVX 165 KDPROTEIN POTATO VIRUS X 128– 234– 306– 1010– 153 256 322 1030 PVORI_PVXCP165 KD PROTEIN POTATO VIRUS X (STRAIN CP) 128– 234– 306– 385– 1010– 153256 322 404 1030 PVORI_PVXX3 165 KD PROTEIN POTATO VIRUS X (STRAIN XJ)128– 234– 306– 1010– 153 256 322 1030 PVORI_SMYEA 150 KD PROTEIN OSSTRAWBERRY MILD YELLOW EDGE- 121– 155– ASSOCIATED VIRUS 146 175PVORI_WCMVM 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 121– (STRAIN M) 146PVORI_WCMVO 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 121– 408– (STRAINO) 146 430 PVP03_HSVSA PROBABLE MEMBRANE HERPESVKUS SAIMIRI (STRAIN 11)424– 462– 551– 579– 1051– ANTIGEN 3 446 486 575 595 1072 PVP10_NPVAC P10PROTEIN AUTOGRAPHA CALIFORNIA NUCLEAR 4– 42– POLYHEDROSIS VIRUS 26 59PVP10_NPVOP P10 PROTEIN ORGYIA PSEUDOTSUOATA 4– MULTICAPSID POLYHEDROSISVIRUS 31 PVP10_NPVSE P10 PROTEIN SPODOPTERA EXIGUA NUCLEAR 35–POLYHEDROSIS VIRUS (STRAIN US) 58 PVP10_RBSDV PROTEIN S10 RICE BLACKSTREAKED DWARF VIRUS 31– 52– 105– 195– 260– 504– 49 77 129 214 283 528PVP10_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS (WTV) 90– 265– PNS10107 291 PVP14_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 694– 857–1124– ANTIGEN PHO B95-8) 715 879 1145 PVP19_EBV PROB CAPSID ASSEMBLYEPSTEIN-BARR VIRUS 346– AND DNA MATUR PROTEI (STRAIN B95-8) 364PVP19_HCMVA PROB CAPSID ASSEMBLY HUMAN CYTOMEGALOVIRUS 77– 122– 200– ANDDNA MATUR PROTEI (STRAIN AD169) 101 149 216 PVP19_HSVSA PROB CAPSIDASSEMBLY HERPESVTRUS SAIMIRI (STRAIN II) 238– AND DNA MATUR PROTEI 265PVP19_VZVD CAPSID ASSEMBLY AND VARICELLA-ZOSTER VIRUS 5– DNA MATURPROTEIN (STRAIN DUMAS) 31 PVP1_SSVI STRUCTURAL PROTEIN VPI SULFOLOBUSVIRUS-LIKE PARTICLE 8– PRECURSOR SSV1 35 PVP21_AMCV CORE PROTEIN P21ARTICHOKE MOTTLED CRINKLE VIRUS 37– 63 PVP21_CNV CORE PROTEIN P21CUCUMBER NECROSIS VIRUS 40– 65 PVP21_CRV CORE PROTEIN P21 CYMBIDIUMRINGSPOT VIRUS 40– 63 PVP21_TBSVC CORE PROTEIN P21 TOMATO BUSHY STUNTVIRUS 40– (STRAIN CHERRY) 63 PVP23_HCMVA PROBABLE CAPSID PROTEIN HUMANCYTOMEGALOVIRUS 141– 187– 261– VP23 (STRAIN AD169) 165 202 282PVP23_HSV1I CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS (TYPE 197– 1/STRAIN17) 220 PVP23_HSV6U PROBABLE CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE206– VP23 6/STRAIN UGANDA-1102) 232 PVP23_VZVD PROBABLE CAPSID PROTEINVARICELLA-ZOSTER VIRUS 117– VP23 (STRAIN DUMAS) 132 PVP26_NPVAC P26PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 12– 58– 117– POLYHEDROSIS VIRUS31 76 141 PVP2_AHSV4 OUTER CAPSID PROTEIN VP2 AFRICAN HORSE SICKNESSVIRUS 868– 974– (SEROTYPE 4/STRAIN VACCINE) 891 994 PVP2_BTV10 OUTERCAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 361– 399– 564– 829–10/ISOLATE USA) 381 424 586 849 PVP2_BTV11 OUTER CAPSID PROTEIN VP2BLUETONGUE VIRUS (SEROTYPE 361– 399– 829– 11/ISOLATE USA) 381 424 849PVP2_BTV13 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYTE 362– 420–617– 657– 13/ISOLATE USA) 382 438 632 676 PVP2_BTV17 OUTER CAPSIDPROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 361– 17/ISOLATE USA) 381PVP2_BTV1A OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 420– 654–1/ISOLATE AUSTRALIA) 438 681 PVP2_BTV1S OUTER CAPSID PROTEIN VP2BLUETONGUE VIRUS (SEROTYPE 14– 117– 420– 654– 1/ISOLATE SOUTH AFRICA) 31140 438 681 PVP2_EHDV1 OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGICDISEASE 153– 229– VIRUS (SEROTYPE 1) 168 252 PVP2_ROTBR RNA-BINDINOPROTEIN VP2 BOVINE ROTA VIRUS (STRAIN RF) 301– 334– 522– 673– 764– 317360 543 699 789 PVP2_ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTA VIRUS(STRAIN UK) 301– 334– 523– 765– 317 360 544 790 PVP2_ROTHW RNA-BINDINGPROTEIN VP2 HUMAN ROTA VIRUS (SEROTYPE 309– 342– 532– 674– 774– 1/STRAINWA) 325 363 553 700 799 PVP2_ROTPC RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS (GROUP 51– 303– 408– 514– 665– C/STRAIN COWDEN) 75 319 425 535 691PVP2_ROTS1 RNA-BINDING PROTEIN VP2 SIMIAN II ROTA VIRUS (STRAIN 34– 219–302– 335– 523– 674– 765– SAII) 57 240 318 361 544 700 790 PVP30_MABVPMINOR NUCLEOPROTEIN VP30 MARBURG VIRUS (STRAIN MUSOKE) 50– 75PVP32_ASFB7 PHOSPHOPROTEIN P32 AFRICAN SWINE FEVER VIRUS 174– (STRAINBA71V) 197 PVP35_EBOV POLYMERASE COMPLEX EBOLA VIRUS 233– PROTEIN VP35256 PVP35_MABVM POLYMERASE COMPLEX MARBURG VIRUS (STRAIN MUSOKE) 49– 78–PROTEIN VP35 75 104 PVP35_MABVP POLYMERASE COMPLEX MARBURG VIRUS (STRAINPOPP) 49– 78– PROTEIN VP35 75 104 PVP35_VACCC IMMUNODOMINANT ENVELOPEVACCINIA VIRUS (STRAIN 278– PROTEIN P35 COPENHAGEN) 304 PVP35_VACCVIMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN WR) 278– PROTEIN P35 304PVP35_VARV IMMUNODOMINANT ENVELOPE VARIOLA VIRUS 279– PROTEIN P35 305PVP38_HSVMG 38 KD PHOSPHOPROTEIN MAREK'S DISEASE HERPES VIRUS 255–(STRAIN GA) 270 PVP38_HSVMN 38 KD PHOSPHOPROTEIN MAREK'S DISEASE HERPESVIRUS 255– (STRAIN MD11/75C/R2) 270 PVP39_NPVAC MAJOR CAPSID PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 296– POLYHEDROSIS VIRUS 311 PVP39_NPVOPMAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA 107– 214– 295– MULTICAPSIDPOLYHEDROSIS VIRUS 134 240 316 PVP3_AHSV4 VP3 CORE PROTEIN AFRICAN HORSESICKNESS VIRUS 65– 126– 215– 845– (SEROTYPE 4/STRAIN VACCINE) 85 147 230862 PVP3_BTV10 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 123– 212–10/ISOLATE USA) 144 227 PVP3_BTV17 VP3 CORE PROTEIN BLUETONGUE VIRUS(SEROTYPE 123– 212– 17/ISOLATE USA) 144 227 PVP3_BTV1A VP3 CORE PROTEINBLUETONGUE VIRUS (SEROTYPE 123– 212– 1/ISOLATE AUSTRALIA) 144 227PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE 121– 671–VIRUS (SEROTYPE 1) 142 695 PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTICHEMORRHAGIC DISEASE 121– 675– VIRUS (SEROTYPE 2/STRA1N AUS 142 695PVP3_RDV MAJOR 114 KD STRUCTURAL RJCE DWARF VIRUS (RDV) 89– 340– 367–690– 742– 748– 960– PROTEIN 108 360 393 717 768 768 975 PVP3_ROTPC INNERCORE PROTEIN VP3 PORCINE ROTA VIRUS (GROUP 405– C/STRAIN COWDEN) 429PVP3_ROTSI INNER CORE PROTEIN VP3 SIMIAN 11 ROTA VIRUS 401– 426– 512–796– (STRAIN SA 11) 425 444 536 822 PVP40_EBV CAPSID PROTEIN P40EPSTEIN-BARR VIRUS 429– (STRAIN B95-8) 454 PVP40_HSV11 CAPSID PROTEINP40 HERPES SIMPLEX VIRUS (TYPE 141– 472– 1/STRAIN 17) 168 492PVP40_HSVEB CAPSID PROTEIN P40 EQUINE HERPES VIRUS TYPE 1 50– 95– 483–(STRAIN AB4P) 67 119 504 PVP40_HSVSA CAPSID PROTEIN P40 HERPES VIRUSSAIMIRI (STRAIN 342– II) 368 PVP40_ILTVT CAPSID PROTEIN P40 INFECTIOUSLARYNGOTRACHEITIS 506– VIRUS (STRAIN THORNE V882) 528 PVP40_MABVM MATRIXPROTEIN VP40 MARBURG VIRUS (STRAIN MUSOKE) 95– 110 PVP40_MABVP MATRIXPROTEIN VP40 MARBURG VIRUS (STRAIN POPP) 95– 110 PVP40_NPVBM STRUCTURALGLYCOPXOTEIN P40 BOMBYX MOR1 NUCLEAR 223– 256– POLYHEDROSIS VIRUS 242272 PVP40_VZVD CAPSID PROTEIN VP24 VARICELLA-ZOSTER VIRUS 47– (STRAINDUMAS) 64 PVP41_NPVAC STRUCTURAL GLYCOPROTEIN GP4I AUTOGRAPHACALIFORNICA NUCLEAR 229– 262– POLYHEDROSIS VIRUS 248 278 PVP41_ROTSIOUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTA VIRUS 483– (STRAIN S11) 508PVP42_ROTSI OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTA VIRUS 395– 483–(STRAIN SA 11) 411 508 PVP47_NPVAC VIRAL TRANSCRIPTION AUTOGRAPHACALIFORNICA NUCLEAR 14– REGULATOR P47 POLYHEDROSIS VIRUS 38 PVP48_NPVOPP48 PROTEIN ORGYIA PSEUDOTSUGATA 136– MULTICAPSID POLYHEDROSIS VIRUS 157PVP4A_VARV MAJOR CORE PROTEIN P4A VARIOLA VIRUS 273– PRECURSOR 288PVP4B_VACCC MAJOR CORE PROTEIN P4B VACCINIA VIRUS (STRAIN 331– PRECURSORCOPENHAGEN) 358 PVP4B_VACCV MAJOR CORE PROTEIN P4B VACCINIA VIRUS(STRAIN WR) 331– PRECURSOR 358 PVP4B_VARV MAJOR CORE PROTEIN P4B VARIOLAVIRUS 331– PRECURSOR 358 PVP4 BTV10 VP4 CORE PROTEIN BLUETONGUE VIRUS(SEROTYPE 174– 233– 545– 10/ISOLATE USA) 193 249 561 PVP4_BTV11 VP4 COREPROTEIN BLUETONGUE VIRUS (SEROTYTE 174– 233– 535– 11/ISOLATE USA) 193249 551 PVP4_BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174– 233–535– 13/ISOLATE USA) 193 249 551 PVP4_BTV2A VP4 CORE PROTEIN BLUETONGUEVIRUS (SEROTYPE 174– 233– 535– 2/ISOLATE USA) 193 249 551 PVP4_NCDVOUTER CAPSID PROTEIN VP4 NEBRASKA CALF DIARRHEA VIRUS 483– (STRAINNCOV-LINCOLN) 508 PVP4_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 386–493– 626– PNS4 407 514 645 PVP4_ROTB4 OUTER CAPSID PROTEIN VP4 BOVINEROTA VIRUS (SEROTYPE 483– 6/STRAIN 8641) 508 PVP4_ROTBC OUTER CAPSIDPROTEIN VP4 BOVINE ROTA VIRUS 483– (STRAIN C486) 508 PVP4_ROTBU OUTERCAPSID PROTEIN VP4 BOVINE ROTA VIRUS 483– (STRAIN UK) 508 PVP4_ROTEHOUTER CAPSID PROTEIN VP4 EQUINE ROTA VIRUS 226– 483– (STRAIN H-2) 250508 PVP4_ROTH1 OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS (SEROTYPE 181–234– 482– 1/STRAIN 1076) 207 249 507 PVP4_ROTH5 OUTER CAPSID PROTEIN VP4HUMAN ROTA VIRUS (SEROTYPE 181– 234– 482– 2/STRAIN RV-5) 207 249 507PVP4_ROTH6 OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS (SEROTYPE 483–1/STRAIN 69M) 508 PVP4_ROTHD OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS(SEROTYPE 181– 234– 482– 2/STRAIN DS1) 207 249 507 PVP4_ROTHJ OUTERCAPSID PROTEIN VP4 HUMAN ROTA VIRUS (STRAIN K8) 483– 524– 508 548PVP4_ROTHK OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS (STRAIN KU) 76–181– 234– 482– 91 207 249 507 PVP4_ROTHL OUTER CAPSID PROTEIN VP4 HUMANROTA VIRUS (STRAIN L26) 181– 234– 482– 207 249 507 PVP4_ROTHM OUTERCAPSID PROTEIN VP4 HUMAN ROTA VIRUS (SEROTYPE 181– 234– 482– 1/STRAINM37) 207 249 507 PVP4_ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS(SEROTYPE 181– 235– 483– 3/STRAIN MCN13) 208 250 508 PVP4_ROTHP OUTERCAPSID PROTEIN VP4 HUMAN ROTA VIRUS (SEROTYPE 181– 234– 482– 3/STRAIN P)207 249 507 PVP4_ROTHT OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS(SEROTYPE 181– 234– 482– 4/STRAIN ST THOMAS 3) 207 249 507 PVP4_ROTHVOUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS (SEROTYPE 181– 482– 4/STRAINVA70) 207 507 PVP4_ROTHW OUTER CAPSID PROTEIN VP4 HUMAN ROTA VIRUS(SEROTYPE 181– 482– 1/STRAIN WA) 207 507 PVP4_ROTP5 OUTER CAPSID PROTEINVP4 PORCINE ROTA VIRUS (SEROTYPE 235– 483– 5/STRAIN OSU) 250 508PVP4_ROTPC OUTER CAPSID PROTEIN VP4 PORCINE ROTA VIRUS (GROUP 487–C/STRAIN COWDEN) 512 PVP4_ROTPG OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (STRAIN 234– 482– GOTTFRIED) 249 507 PVP4_ROTPY OUTER CAPSIDPROTEIN VP4 PORCINE ROTA VIRUS (STRAIN YM) 235– 483– 250 508 PVP4_ROTRHOUTER CAPSID PROTEIN VP4 RHESUS ROTA VIRUS 483– 508 PVP4_ROTSF OUTERCAPSID PROTEIN VP4 SIMIAN 11 ROTA VIRUS 483– (STRAIN SA11-FEM) 508PVP4_ROTSS OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTA VIRUS 395– 483–(STRAIN SA11-SEM) 411 508 PVP4_SBMV P4 PROTEIN SOUTHERN BEAN MOSAICVIRUS 90– 114 PVP4_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 192– 416–498– 564– PNS4 215 438 519 591 PVP5_BTV10 OUTER CAPSID PROTEIN VP5BLUETONGUE VIRUS (SEROTYPE 295– 326– 494– 10/ISOLATE USA) 317 345 517PVP5_BTV11 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 295– 326–494– 11/ISOLATE USA) 317 345 517 PVP5_BTV13 OUTER CAPSID PROTEIN VP5BLUETONGUE VIRUS (SEROTYPE 295– 494– 13/ISOLATE USA) 317 517 PVP5_BTV1AOUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 87– 295– 1/ISOLATEAUSTRALIA) 102 317 PVP5_BTV1S OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS(SEROTYPE 295– 1/ISOLATE SOUTH AFRICA) 317 PVP5_BTV2A OUTER CAPSIDPROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 295– 2/ISOLATE USA) 317 PVP5_RDVOUTER COAT PROTEIN P5 RICE DWARF VIRUS 265– 622– 690– 284 639 715PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 9– 232– 261–10/ISOLATE USA) 27 249 276 PVP61_NPVAC 61 KD PROTEIN AUTOGRAPHACALIFORNIA NUCLEAR 321– 438– POLYHEOROSIS VIRUS 337 462 PVP62_BTV10 VP6PROTEIN BLUETONGUE VIRUS (SEROTYPE 5– 257– 10/ISOLATE USA) 23 272PVP62_MRDV PROB NONSTRUCTURAL 36 MAIZE ROUGH DWARJ VIRUS 130– 3 KDPROTEIN 146 PVP64_NPVOP MAJOR ENV GLYCOPROTEIN ORGYIA PSEUDOTSUGATA 81–235– 286– PREC MULTICAPSID POLYHEDROSIS VIRUS 99 252 313 PVP67_NPVACMAJOR ENV GLYCOPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 84– 238– PRECPOLYHEDROSIS VIRUS 102 255 PVP67_NPVGM MAJOR ENVELOPE GALLERIAMELLONELLA NUCLEAR 155– GLYCOPROTEIN POLYHEDROSIS VIRUS 172 PVP6_BTV11VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5– 228– 257– 11/ISOLATE USA) 23245 272 PVP6_BTV13 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5– 228– 257–13/ISOLATE USA) 23 245 272 PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS(SEROTYPE 5– 228– 257– 17/ISOLATE USA) 23 245 272 PVP6_BTV1S VP6 PROTEINBLUETONGUE VIRUS (SEROTYPE 9– 232– 261– 1/ISOLATE SOUTH AFRICA) 27 249276 PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 204– 233–2/ISOLATE USA) 221 248 PVP6_WTV STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS374– 397 PVP6_WTVNI STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS 374– (STRAINNJ) 397 PVP74_NPVAC P74 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 254–POLYHEDROSIS VIRUS 275 PVP7S_HSVSA PROBABLE MEMBRANE HERPES VIRUSSAIMIRI (STRAIN 127– ANTIGEN 75 II) 147 PVP79_NPVAC 79 KD PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 274– 405– 678– POLYHEDROSIS VIRUS 301 420704 PVP7_BTV13 VP7 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 197–13/ISOLATE USA) 222 PVP7_EHDV1 VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGICDISEASE 205– 301– VIRUS (SEROTYPE 1) 222 323 PVP7_RDV NONSTRUCTURALPROTEIN RICE DWART VIRUS 400– PNS7 416 PVP7_WTV NONSTRUCTURAL PROTEINWOUND TUMOR VIRUS 262– PNS7 285 PVP80_NPVAC CAPSID PROTEIN P80AUTOGRAPHA CALIFORNICA NUCLEAR 98– 638– POLYHEDROSIS VIRUS 123 660PVP87_NPVOP CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA 571– MULTICAPSIDPOLYHEDROSIS VIRUS 593 PVP8_BTV10 NONSTRUCTURAL PROTEIN P8 BLUETONGUEVIRUS (SEROTYPE 104– 10/ISOLATE USA) 120 PVP8_BTV11 NONSTRUCTURALPROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 104– 11/ISOLATE USA) 120PVP8_BTV33 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 104–13/ISOLATE USA) 120 PVP8_BTV17 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS(SEROTYPE 104– 17/ISOLATE USA) 120 PVP8_BTV1A NONSTRUCTURAL PROTEIN P8BLUETONGUE VIRUS (SEROTYPE 104– 1/ISOLATE AUSTRALIA) 120 PVP8_BTV1SNONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 104– 1/ISOLATE SOUTHAFRICA) 120 PVP8_BTV2A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS(SEROTYPE 104– 2/ISOLATE USA) 120 PVP8_RDV OUTER CAPSID PROTEIN P8 RICEDWARF VIRUS 374– 400 PVP8_RGDV OUTER CAPSID PROTEIN PS RICE GALL DWARFVIRUS 77– 216– 398– 202 242 425 PVP8_VACCC STRUCTURAL PROTEIN VP8VACCINIA VIRUS (STRAIN 225– PRECURSOR COPENHAGEN) 242 PVP8_VACCVSTRUCTURAL PROTEIN VP8 VACCINIA VIRUS (STRAIN WR) 225– PRECURSOR 242PVP8_VARV STRUCTURAL PROTEIN VP8 VARIOLA VIRUS 225– PRECURSOR 242PVP8_WTV OUTER CAPSID PROTEIN PS WOUND TUMOR VIRUS 111– 214– 251– 379–129 241 211 405 PVP9_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 51– PNS972 PVP9_RGDV NONSTRUCTURAL PROTEIN S9 RICE GALL DWARF VIRUS 151– 175PVPHE_NPVAC 29 KD POLYHEDRAL AUTOGRAPHA CALIFORNICA NUCLEAR 145– 225–ENVELOPE PROTEIN POLYHEDROSIS VIRUS 166 245 PVPHE_NPVOP 32 KD POLYHEDRALORGYIA PSEUDOTSUGATA 122– ENVELOPE PROTEIN MULTICAPSID POLYHEDROSISVIRUS 144 PVPRT_ADE12 ENDOPROTEASE HUMAN ADENOVIRUS TYPE 12 161– 181PVPRT_MMTVB PROTEASE MOUSE MAMMARY TUMOR VIRUS 42– (STRAIN BR6) 63PVTRT_MPMV PROTEASE SIMIAN MASON-PFIZER VIRUS 80– 99 PVPRT_SMRVHPROTEASE SQUIRREL MONKEY RETROVIKUS 256– 271 PVPRT_SRVI PROTEASE SIMIANRETROVIRUS SRV-I 80– 99 PVPU_HVIB1 VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS 3– TYPE 1 (BH10 ISOLATE HXB3) 27 PVPU_HVIB8 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS 4– TYPE 1 (BH8 ISOLATE) 27 PVPU_HVIBN VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS 3– TYPE 1 (BRAIN ISOLATE) 28 PVPU_HVIBR VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 3– TYPE 1 (BRU ISOLATE) 27PVPU_HVIEL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 3– TYPE 1 (ELIISOLATE) 26 PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 4– TYPE1 (HXB2 ISOLATE) 27 PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS3– TYPE 1 (JRCSF ISOLATE) 28 PVPU_HVIMA VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS 2– TYPE 1 (MAL ISOLATE) 27 PVPU_HVIMN VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS 3– TYPE 1 (MM ISOLATE) 20 PVPU_HVIND VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 3– TYPE 1 (NDK ISOLATE) 28PVPU_HVIPV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 3– TYPE 1 (PV22ISOLATE) 27 PVPU_HVISI VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 3– TYPE1 (SFI62 ISOLATE) 28 PVPU_HVISC VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS3– TYPE 1 (SC ISOLATE) 28 PVPU_HV1Z2 VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS 3– TYPE 1 (Z2/CDC-ZJ4 ISOLATE) 28 PVPU_JSRV VPU PROTEIN SHEEPPULMONARY ADENOMATOSIS 24– VIRUS (JAAGSIEKTE SHEEP RET 45 PVPX_HV2BE VPXPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 10– TYPE 2 (ISOLATE BEN) 32PVPX_HV2CA VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 10– TYPE 2 (ISOLATECAM2) 32 PVPX_HVJDI VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 10– TYPE 2(ISOLATE D194) 32 PVPX_HV1D2 VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 9–TYPE 2 (ISOLATE D205.7) 32 PVPX_HVJOI VPX PROTEIN HUMAN IMMUNODEFICIENCYVIRUS 10– TYPE 2 (ISOLATE GHANA-1 ) 32 PVPX_HV7NZ VPX PROTEIN HUMANIMMUNODEFICIENCY VIRUS 10– TYPE 2 (ISOLATE NIH-Z) 32 PVPX_HVJRO VPXPROTEIN HUMAN IMMUNODEFICIENCY VIRUS 10– TYPE 2 (ISOLATE ROD) 32PVPX_HVJSB VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 10– TYPE 2 (ISOLATESBLISY) 32 PVPX_HV2ST VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS 10– TYPE2 (ISOLATE ST) 32 PVPX_LDV VPX PROTEIN LACTATEOEHYDROGENASE-ELEVATING145– VIRUS 165 PVPX_SIVAI VPX PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 66–(ISOLATE AGM/CLONE GRM)(S 84 PVPX_SIVM1 VPX PROTEIN SIMIANIMMUNODEFICIENCY VIRUS 10– (MMI42-8J ISOLATE) (SIV-MAC) 32 PVPX_SIVMKVPX PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 10– (K6W ISOLATE) (SIV-MAC) 32PVPX_SIVML VPX PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 10– (K78 ISOLATE)(SIV-MAC) 31 PVPX_SIVS4 VPX PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 10–(F236/SM114 ISOLATE) (SOOTY M 32 PVPX_SIVSP VPX PROTEIN SIMIANIMMUNODEFICIENCY VIRUS 10– (PBJ/BC13 ISOLATE) (SOOTY MA 32 PVRNA_BSMVALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS 290– 904– (BSMV) 312 929PVS05_ROTBR NONSTRUCTURAL PROTEIN BOVINE ROTA VIRUS (STRAIN RF) 140–461– NCVP2 157 487 PVS05_ROTHI NONSTRUCTURAL PROTEIN HUMAN ROTAVIRUS(STRAIN IGV- 140– 428– 457– NCVP2 80-3) 157 450 471 PVS05_ROTPCNONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS (GROUP 88– NS53 C/STRAIN CDWDEN)112 PVS05_ROTSI NONSTRUCTURAL PROTEIN SIMIAN II ROTAVIRUS 399– NCVP2(STRAIN SAII) 414 PVS06_ROTBR VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN RF)202– 225 PVS06_ROTBS VP6 PROTEIN BOVTNE ROTAVIRUS (GROUP 64– C/STRAINSMINTOKU) 85 PVS06_ROTBU VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 202–225 PVS06_ROTEF VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN FLU) 202– 225PVS06_ROTEH VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN IL2) 202– 225PVS06_ROTGA VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN 22– ADRV) (ADULTDIARRHEA ROTAVIRU 40 PVS06_ROTGI VP6 PROTEIN ROTAVIRUS (GROUP B/STRAINIDIR) 22– 40 PVS06_ROTHI VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 202–1/STRAIN 1076) 225 PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS (GROUP 64–C/STRAIN BRISTOL) 85 PVS06_ROTHS VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE202– 2/STRAIN S2) 225 PVS06_ROTHW VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE202– 1/STRAIN WA) 225 PVS06_ROTPC VP6 PROTEIN PORCINE ROTAVIRUS (GROUP64– 314– C/STRAIN COWDEN) 85 340 PVS06_ROTPG VP6 PROTEIN PORCINEROTAVIRUS 202– (STRAIN GOTTFRIED) 225 PVS07_ROTBJ GLYCOPROTEIN VP7BOVINE ROTAVIRUS 131– (STRAIN KN-4) 155 PVS08_ROTPC GLYCOPROTEIN VP7PORCINE ROTAVIRUS (GROUP 117– PRECURSOR C/STRAIN COWDEN) 136 PVS08_ROTSINONSTRUCTURAL PROTEIN SIMIAN II ROTAVIRUS 274– NCVP4 (STRAIN SA11) 295PVS09_ROTB6 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131– 6/STRAIN61A) 155 PVS09_ROTBA GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A44) 131–155 PVS09_ROTBB GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131–10/STRAIN B223) 155 PVS09_ROTBIC GLYCOPROTEIN VP7 BOVINE ROTAVIRUS(STRAIN KK3) 131– 155 PVS09_ROTBT GLYCOPROTEIN VP7 BOVINE ROTAVIRUS(SEROTYPE 131– 1/STRAIN TW) 155 PVS09_ROTC7 GLYCOPROTEIN VP7 CHICKENROTAVIRUS A (SEROTYPE 134– 7/STRAIN CH2) 158 PVS09_ROTEL GLYCOPROTEINVP7 EQUINE ROTAVIRUS (STRAIN L338) 131– 155 PVS09_ROTGI GLYCOPROTEIN VP7ROTAVIRUS (GROUP B/STRAIN ID1R) 205– PRECURSOR 232 PVS09_ROTH4GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131– 197– 4/STRAIN RV-4) 155212 PVS09_ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197– 2/STRAINHUS) 212 PVS09_ROTHD GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197–2/STRAIN DS1) 212 PVS09_ROTHH GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE197– 2/STRAIN HN126) 212 PVS09_ROTHL GLYCOPROTEIN VP7 HUMAN ROTAVIRUS(STRAIN L26) 131– 197– 155 212 PVS09_ROTHM GLYCOPROTEIN VP7 HUMANROTAVIRUS (SEROTYPE 131– 197– 1/STRAIN M37) 155 212 PVS09_ROTHOGLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131– 197– 1/STRAIN MO ANDSTRAIN D) 155 212 PVS09_ROTH7 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE131– 3/STRAIN P) 155 PVS09_ROTHR GLYCOPROTEIN VP7 HUMAN ROTAVIRUS(SEROTYPE 131– 3/STRAIN RRV) 155 PVS09_ROTHS GLYCOPROTEIN VP7 HUMANROTAVIRUS (SEROTYPE 197– 3/STRAIN S2) 212 PVS09_ROTHV GLYCOPROTEIN VP7HUMAN ROTAVIRUS (SEROTYPE 197– 4/STRAIN VA70) 212 PVS09_ROTHWGLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131– 197– 1/STRAIN WA) 155212 PVS09_ROTP5 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 131– 197–5/STRAIN OSU) 155 212 PVS09_ROTP6 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS(SEROTYPE 131– 5/STRAIN TFR-41) 155 PVS09_ROTPB GLYCOPROTEIN VP7 PORCINEROTAVIRUS (SEROTYPE 197– 4/STRAIN BEN-144) 212 PVS09_ROTPM GLYCOPROTEINVP7 PORCINE ROTAVIRUS (SEROTYPE 197– 4/STRAIN BMI-I) 212 PVS09_ROTRHGLYCOPROTEIN VP7 RHESUS ROTAVIRUS 131– 155 PVS09_ROTSI GLYCOPROTEIN VP7SIMIAN 11 ROTAVIRUS 131– (STRAIN SA11) 155 PVS11_ROTGA NONSTRUCTURALPROTEIN ROTAVIRUS (GROUP B/STRAIN 136– ADRV) (ADULT DIARRHEA ROTAVIRU153 PVSH_HRSVA SMALL HYDROPHOBIC HUMAN RESPIRATORTY SYNCYTIAL 16–PROTEIN VIRUS (STRAIN A2) 41 PVSH_MUMPI SMALL HYDROPHOBIC MUMPS VIRUS(STRAIN SBL-I), 7– PROTEIN AND MUMPS VIRUS (STRAIN SOL) 29 PVSH_MUMP2SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN EDINGBURGH 7– PROTEIN 246) 29PVSH_(—) SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN EDINGBURGH 7– PROTEIN 4)29 PVSH_MUMPA SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN MATSUYAMA) 10–PROTEIN 29 PVSH_MUMPB SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN BELFAST) 7–PROTEIN 29 PVSH_MUMPE SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN ENDERS) 7–PROTEIN 29 PVSH_MUMPJ SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN JERYL-LYNN)7– PROTEIN 29 PVSH_MUMPK SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN KILHAM)7– PROTEIN 29 PVSH_MUMPL SMALL HYDROPHOBIC MUMPS VIRUS (STRAINBRISTOL 1) 6– PROTEIN 29 PVSH_MUMPM SMALL HYDROPHOBIC MUMPS VIRUS(STRAIN MIYAHARA 10– PROTEIN VACCINE) 29 PVSH_MUMPR SMALL HYDROPHOBICMUMPS VIRUS (STRAIN RW) 7– PROTEIN 29 PVSH_MUMPT SMALL HYDROPHOBIC MUMPSVIRUS (STRAIN TAKAHASHI) 10– PROTEIN 29 PVSH_MUMPU SMALL HYDROPHOBICMUMPS VIRUS (STRAIN URABE 10– PROTEIN VACCINE AM9) 29 PVS11_REOVL SIGMA1 PROTEIN REOVIRUS (TYPE 1/STRAIN LANO) 110– PRECURSOR 136 PVS13_RJEOVDSIGMA 3 PROTEIN REOVIRUS (TYPE 1/STRAIN 152– DEARING) 170 PVS13_REOVJSIGMA 3 PROTEIN REOVIRUS (TYPE 3/STRAIN 152– D5/JONES) 170 PVS13_REOVLSIGMA 3 PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 152– 170 PVSIS_REOVL SIGMAI-S PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 79– 101 PVST2_HEVBU STRUCTURALPROTEIN 2 HEPATITIS E VIRUS (STRAIN 292– PRECURSOR BURMA) 311PVST2_HEVME STRUCTURAL PROTEIN 2 HEPATITIS E VIRUS (STRAIN 292–PRECURSOR MEXICO) 311 PVST2_HEVMY STRUCTURAL PROTEIN 2 HEPATITIS E VIRUS292– PRECURSOR (STRAIN MYANMAR) 311 PVST2_HEVPA STRUCTURAL PROTEIN 2HEPATITIS E VIRUS 292– PRECURSOR (STRAIN PAKISTAN) 311 PVST2_HEVRHSTRUCTURAL PROTEIN 2 HEPATITIS E VIRUS (ISOLATE 160– RHESUS) 179PVT2_MYXVL TUMOR NECROSIS FACTOR MYXOMA VIRUS (STRAIN LAUSANNE) 261– SOLRECEPTOR PREC 283 PVT2_SFVKA TUMOR NECROSIS FACTOR SHOPE FIBROMA VIRUS(STRAIN 270– SOL RECEPTOR PREC KASZA) 289 PVT3A_CAPV1 PROTEIN T3ACAPRIPOXVIRUS (STRAIN INS-1) 116– 138 PVT4_SFVKA T4 PROTEIN SHOPEFIBROMA VIRUS 125– (STRAIN KASZA) 148 PVTER_EBV PROBABLE DNA PACKAGINGEPSTEIN-BARR VIRUS 117– 166– 227– PROTEIN (STRAIN 1195-8) 139 192 250PVTER_HCMVA PROBABLE DNA PACKAGING HUMAN CYTOMEGALOVIRUS 409– PROTEIN(STRAIN AD169) 430 PVTER_HSVII PROBABLE DNA PACKAGING HERPES SIMPLEXVIRUS (TYPE 363– 673– PROTEIN 1/STRAIN 11) 380 688 PVTER_HSV6U PROBABLEDNA PACKAGING HERPES SIMPLEX VIRUS (TYPE 260– PROTEIN 6/STRAIN UGANDA1102) 278 PVTER_HSVEB PROBABLE DNA PACKAGING EQUINE HERPESVIRUS TYPE 1364– PROTEIN (STRAIN A114P) 381 PVTER_IISV1I PRODADLE DNA PACKAGINGICTALURID HERPESVIRUS 1 309– 756– PROTEIN 333 781 PVTER_HSVSA PROBABLEDNA PACKAGING HERPESVIRUS SAIMIRI (STRAIN II) 218– PROTEIN 241PVTER_VZVD PROBABLE DNA PACKAGING VARICELLA-ZOSTER VIRUS 372– PROTEIN(STRAIN DUMAS) 389 PX_HPBG5 PROTEIN X GROUND SQUIRREL HEPATITIS VIRUS68– 85 PX_WHVI PROTEIN X WOODCHUCK HEPATITIS VIRUS 1 68– 85 PX_WHV59PROTEIN X WOODCHUCK HEPATITIS VIRUS 59 68– 85 PX_WHV7 PROTEIN XWOODCHUCK HEPATITIS VIRUS 7 68– 85 PX_WHV8 PROTEIN X WOODCHUCK HEPATITISVIRUS 8 68– 85 PX_WHV81 PROTEIN X WOODCHUCK HEPATITIS VIRUS 8 68–(INFECTIOUS CLONE) 85 PX_WHVW6 PROTEIN X WOODCHUCK HEPATITIS VIRUS W6468– (ISOLATE PWS23) 85 PY104_ADE07 HYPOTHETICAL 10 4 KD HUMAN ADENOVIRUSTYPE 7 55– EARLY PROTEIN 73 PY108_SSV1 HYPOTHETICAL 10 8 KD SULFOLOBUSVIRUS-LIKE PARTICLE 66– PROTEIN SSVI 90 PY10K_MSVS HYPOTHETICAL 10 9 KDMAIZE STREAK VIRUS (SOUTH- 24– PROTEIN AFRICAN ISOLATE) 47 PY118_SSVIHYPOTHETICAL 11 8 KD SULFOLOBUS VIRUS-LIKE PARTICLE 42– PROTEIN SSVI 59PY11K_PASV HYPOTHETICAL 11 9 KD PANICUM STREAK VIRUS 29– PROTEIN 52PY12K_BNYVG RNA-3 HYPOTHETICAL 11 BEET NECROTIC YELLOW VEIN 15– 6 KDPROTEIN MOSAIC VIRUS (ISOLATE G1) 42 PY12K_CMVSI HYPOTHETICAL 12 4 KDCYMBIDIUM MOSAIC VIRUS 8– PROTEIN (STRAIN SINGAPORE) 30 PY137_ADE02HYPOTHETICAL PROTEIN HUMAN ADENOVIRUS TYPE 2 28– B-137 50 PY13K_CLVKHYPOTHETICAL 13 1 KD CASSAVA LATENT VIRUS 34– PROTEIN (STRAIN WESTKENYAN 844) 55 PY13K_CLVN HYPOTHETICAL 13 1 KD CASSAVA LATENT VIRUS 34–PROTEIN (STRAIN NIGERIAN) 55 PY13K_TYLCM HYPOTHETICAL 13 3 KD TOMATOYELLOW LEAF CURL VIRUS 10– PROTEIN (STRAIN MARMANDE) 27 PY13K_TYLCVHYPOTHETICAL 13 4 KD TOMATO YELLOW LEAF CURL VIRUS 34– PROTEIN 55PY145_ADE07 HYPOTHETICAL 14 5 KD HUMAN ADENOVIRUS TYPE 7 108– EARLYPROTEIN 132 PY14K_CSMV HYPOTHETICAL 14 5 KD CHLORIS STRIATE MOSAIC VIRUS54– PROTEIN 80 PY18K_5SV1 HYPOTHETICAL 18 0 KD SULFOLOBUS VIRUS-LIKEPARTICLE 100– 141– PROTEIN SSVI 125 162 PY206_ADE07 HYPOTHETICAL 20 6 KDHUMAN ADENOVIRUS TYPE 7 50– EARLY PROTEIN 73 PY25K_BNYVF RNA-3HYPOTHETICAL 24 BEET NECROTIC YELLOW VEIN 163– 7 KD PROTEIN MOSAIC VIRUS(ISOLATE F2) 188 PY29K_NPVAC HYPOTHETICAL 29 9 KD AUTOGRAPHA CALIFORNIANUCLEAR 90– PROTEIN POLYHEDROSIS VIRUS 106 PY2_SOCMV HYPOTHETICALPROTEIN 1 SOYBEAN CHLOROTIC MOTTLE VIRUS 65– 90 PY32K_SSVI HYPOTHETICAL31 7 KD SULFOLOBUS VIRUS-LIKE PARTICLE 122– PROTEIN SSV1 142 PY6KO_SSVIHYPOTHETICAL 6 0 KD SULFOLOBUS VIRUS-LIKE PARTICLE 23– PROTEIN SSV1 44PY7K4_VACCV HYPOTHETICAL 7 4 KD VACCINIA VIRUS (STRAIN WR) 21– PROTEIN36 PY7K_MEASH HYPOTHETICAL 7 KD MEASLES VIRUS (STRAIN HALLE) 3– PROTEIN25 PY7_SOCMV HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE VIRUS 96–120 PY85K_SSVI HYPOTHETICAL 85 7 KD SULFOLOBUS VIRUS-LIKE PARTICLE 80–155– 543– 657– 764– PROTEIN SSV1 105 173 565 675 784 PY8_SOCMVHYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE VIRUS 10– 27 PY97_ADE07HYPOTHETICAL 9 7 KD HUMAN ADENOVIRUS TYPE 7 54– EARLY PROTEIN 77PY9K2_SSVJ HYPOTHETICAL 9 2 KD SULFOLOBUS VIRUS-LIKE PARTICLE 16– 62–PROTEIN SSVI 41 77 PYAL1_EBV HYPOTHETICAL BALFI EPSTEIN-BARR VIRUS 205–PROTEIN (STRAIN B95-8) 220 PYB01_FOWPM HYPOTHETICAL BAMHI-ORF1 FOWLPOXVIRUS (ISOLATE 354– PROTEIN HP-438[MUNICH]) 374 PYB07_FOWPM HYPOTHETICALBAMHI-ORF7 FOWLPOX VIRUS (ISOLATE 104– PROTEIN HP-438[MUNICH]) 121PYB09_FOWPM HYPOTHETICAL B AMM-ORF9 FOWLPOX VIRUS (ISOLATE 49– PROTEINHP-438[MUNICH]) 67 PYB10_FOWPM HYPOTHETICAL BAMHI-ORF10 FOWLPOX VIRUS(ISOLATE 84– PROTEIN HP-438[MUNICH]) 100 PYB12_FOWPM HYPOTHETICALBAMH1-ORF12 FOWLPOX VIRUS (ISOLATE 114– 154– PROTEIN HP-438[MUNICH]) 134169 PYBL2_SFV3L BEL-2 PROTEIN SIMIAN FOAMY VIRUS (TYPE 113– 3/STRAINLK3) 128 PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETROVIRUS 52– 78PYDH1_HSVSC HYP 21 7 KD PROTEIN IN HERPESVIRUS SAIMIRI (SUBGROUP 206–DKFR J'REGION C/STRAIN 48S) 230 PYDH3_HSVSC HYP 9 5 KD PROTEIN INHERPESVIRUS SAIMIRI (SUBGROUP 69– DHFR J'REGION C/STRAIN 488) 90PYEC4_EBV HYPOTHETICAL EC-RF4 EPSTEIN-BARR VIRUS 200– PROTEIN (STRAINB95-8) 222 PYGA1_HSVMB HYPOTHETICAL 23 6 KD MAREK'S DISEASE HERPESVIRUS175– PROTEIN (STRAIN BC-I) 190 PYGA1_HSVMM HYPOTHETICAL 23 6 KD MAREK'SDISEASE HERPESVIRUS 175– PROTEIN (STRAIN MD5) 190 PYHL4_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEOALO VIRUS 101– HHLF4 (STRAIN AD 169)121 PYHR3_VACCV HYP HOST RANGE 27 4 KD VACCINIA VIRUS (STRAIN WR) 86–PROTEIN 102 PYIO2_CVMA5 HYP PROTEIN IN MURINE CORONAVIRUS MHV 141–NUCLEOCAPSID ORF 156 PYIOR_CVMI HYP PROTEIN IN MURINE CORONA VIRUS MHV141– NUCLEOCAPSID ORF 156 PYIOR_CVMS HYP PROTEIN IN MURINE CORONA VIRUSMHV 7– NUCLEOCAPSID ORF 33 PYKR2_EBV HYPOTHETICAL BKRT2 EPSTEIN-BARRVIRUS 67– PROTEIN (STRAIN B93-8) 90 PYLI2_ADE41 HYPOTHETICAL 1 0 KDHUMAN ADENOVIRUS TYPE 41 53– PROTEIN 73 PYMR2_EBV BMRF2 PROTEINEPSTEIN-BARR VIRUS 76– 128– 213– 330– (STRAIN B95-8) 100 135 241 350PYMSP_IRV22 HYPOTHETICAL 15 9 KD SIMULIUM IRIDESCENT VIRUS 23– PROTEIN(INSECT IRIDESCENT VIRUS TYPE 46 22) PYORI_ADEG1 HYPOTHETICAL PROTEINAVIAN ADENOVIRUS OALI (STRAIN 59– PHELPS) (FOWL ADENOVIRUS 1) 80PYORI_COYMV HYPOTHETICAL 23 KD COMMELINA YELLOW MOTTLE VIRUS 56– PROTEIN83 PYORI_TTV1 HYPOTHETICAL 7 9 KD THERMOPROTEUS TENAX VIRUS 1 13–PROTEIN (STRAIN KRAI) 40 PYOR2_COYMV HYPOTHETICAL 15 KD COMMELINA YELLOWMOTTLE VIRUS 23– PROTEIN 49 PYOR2_EAV HYPOTHETICAL 25 6 KD EQUINEARTERJTIS VIRUS 165– PROTEIN 192 PYOR2_LELV HYPOTHETICAL 28 4 KDLELYSTAD VIRUS 196– PROTEIN 212 PYOR3_LVX HYPOTHETICAL 11 8 KD LILYVIRUS X 71– PROTEIN 92 PYOR3_NMV HYPOTHETICAL 14 KD NARCISSUS MOSAICVIRUS 7– PROTEIN 30 PYOR3_PVX HYPOTHETICAL 12 KD POTATO VIRUS X 11–PROTEIN 34 PYOR3_PVXCP HYPOTHETICAL 12 KD POTATO VIRUS X (STRAIN CP) 11–PROTEIN 34 PYOR3_WCMVM HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS 9–PROTEIN (STRAIN M) 29 PYOR3_WCMVO HYPOTHETICAL 13 KD WHITE CLOVER MOSAICVIRUS 9– PROTEIN (STRAIN O) 31 PYOR5_ADEGI HYPOTHETICAL 31 5 KD AVIANADENOVIRUS GALI (STRAIN 69– PROTEIN PHELPS) (FOWL ADENOVIRUS 1) 86PYOR3_EAV HYPOTHETICAL 28 7 KD EQUINE ARTERITIS VIRUS 139– PROTEIN 158PYOR6_NMV HYPOTHETICAL 10 KD NARCISSUS MOSAIC VIRUS 10– PROTEIN 26PYORI_TTV1 HYPOTHETICAL 16 6 KD THERMOPROTEUS TENAX VIRUS I 13– PROTEIN(STRAIN KRAI) 32 PYORL_TTV1 HYPOTHETICAL 16 3 KD THERMOPROTEUS TENAXVIRUS 1 16– PROTEIN (STRAIN KRAI) 39 PYORM_TTVI HYPOTHETICAL 38 6 KDTHERMOPROTEUS TENAX VIRUS 1 82– 233– PROTEIN (STRAIN KRAI) 102 256PYORP_TTV1 HYPOTHETICAL 20 2 KD THERMOPROTEUS TENAX VIRUS 1 91– PROTEIN(STRAIN KRAI) 115 PYP24_RTBV HYPOTHETICAL P24 RICE TUNGRO BACILLIFORMVIRUS 2– 104– PROTEIN 25 126 PYP24_RTBVP HYPOTHETICAL P24 RICE TUNGROBACILLIFORM VIRUS 2– 104– PROTEIN (ISOLATE PHILIPPINES) 25 126PYP47_NPVAC HYPOTHETICAL 43 5 KD AUTOGRAPHA CALIFORNIA NUCLEAR 211–PROTEIN POLYHEDROSIS VIRUS 234 PYP62_NPVOP HYPOTHETICAL 12 2 KD ORGYIAPSEUDOTSUGATA 82– PROTEIN MULTICAPSID POLYHEDROSIS VIRUS 108 (OPPYP63_NPVOP HYPOTHETICAL 40 0 KD ORGYIA PSEUDOTSUGATA 27– 215– PROTEINMULTICAPSID POLYHEDROSIS VIRUS 54 230 (OP PYP7B_TNVD HYPOTHETICAL P7BTOBACCO NECROSIS VTRUS (STRAIN 13– PROTEIN D) (TNV) 31 PYPO4_NPVLDHYPOTHETICAL 8 5 KD LYMANTRIA DISPAR MULTICAPSID 16– PROTEIN NUCLEARPOLYHEDROSIS VIRUS 33 PYRF1_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEXVIRUS (TYPE 42– RF1 6/STRAIN GS) 66 PYRF2_HSV6G HYPOTHETICAL PROTEINHERPES SIMPLEX VIRUS (TYPE 55– RF2 6/STRAIN GS) 74 PYRF3_HSV6GHYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS (TYPE 32– RF3 6/STRAIN GS) 56PYRP1_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENT VIRUS (CIV) 20– ORF1(INSECT IRIDESCENT VIRUS TYPE 43 6) PYRP4_IRV6 REPETmVE PROTEIN CHILOIRIDESCENT VIRUS (CIV) 44– ORF4 (INSECT IRIDESCENT VIRUS TYPE 69 6)PYRP5_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENT VIRUS (CIV) 98– 179– 260–ORF5 (INSECT IRIDESCENT VIRUS TYPE 123 204 283 6) PYRR1_EBV HYPOTHETICALBRRF1 EPSTEIN-BARR VIRUS 199– PROTEIN (STRAIN D95-8) 223 PYRR2_EBVHYPOTHETICAL BRRF2 EPSTEIN-BARR VIRUS 164– PROTEIN (STRAIN D95-8) 182PYSR1_EBV HYPOTHETICAL BSRF1 EPSTEIN-BARR VIRUS 92– PROTEIN (STRAIND95-8) 113 PYTR1_EBV HYPOTHETICAL BTRF1 EPSTEIN-BARR VIRUS 383– PROTEIN(STRAIN D95-8) 401 PYUB2_NPVOP HYPOTHETICAL 24 0 KD ORGYIA PSEUDOTSUGATA133– PROTEIN MULTICAPSID POLYHEDROSIS VIRUS 152 (OP PYVAE_VACCCHYPOTHETICAL 18 2 KD VACCINIA VIRUS (STRAIN 82– 140– PROTEIN COPENHAGEN)99 156 PYVAF_VACCC HYPOTHETICAL 8 4 KD VACCINIA VIRUS (STRAIN 17– 51–PROTEIN COPENHAGEN) 40 68 PYVAL_VACCV HYPOTHETICAL 9 9 KD VACCINIA VIRUS(STRAIN WR), 21– PROTEIN AND VACCINIA VIRUS (STRAIN COPE 43 PYVAT_VACCVHYPOTHETICAL 8 9 KD VACCINIA VIRUS (STRAIN WR), 28– PROTEIN AND VACCINIAVIRUS (STRAIN COPE 46 PYVBE_VACCV HYPOTHETICAL 10 5 KD VACCINIA VIRUS(STRAIN WR), 9– PROTEIN AND VACCINIA VIRUS (STRAIN COPE 28 PYVBG_VACCCHYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN 37– PROTEIN COPENHAGEN) 54PYVCA_VACCC HYPOTHETICAL 8 0 KD VACCINIA VIRUS (STRAIN 18– PROTEINCOPENHAGEN) 35 PYVD2_VACCV HYPOTHETICAL 8 6 KD VACCINIA VIRUS (STRAINWR), 5– 36– PROTEIN AND VACCINIA VIRUS (STRAIN COPE 26 52 PYVDA_VACCCHYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN 22– 44– PROTEIN COPENHAGEN)38 64 PYVDA_VACCV HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN WR) 3– 22–44– PROTEIN 18 38 64 PYVFA_VACCC HYPOTHETICAL 7 1 KD VACCINIA VIRUS(STRAIN 48– PROTEIN COPENHAGEN) 67 PYVFF_VACCC HYPOTHETICAL 8 8 KDVACCINIA VIRUS (STRAIN 23– PROTEIN COPENHAGEN) 42 PYVGA_VACCCHYPOTHETICAL 14 3 KD VACCINIA VIRUS (STRAIN 105– PROTEIN COPENHAGEN) 127PYVKB_VACCC HYPOTHETICAL 9 0 KD VACCINIA VIRUS (STRAIN 54– PROTEINCOPENHAGEN) 70 PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS 150–PROTEIN (STRAIN B95-8) 166 PY14K_CSMV HYPOTHETICAL 14 5 KD CHLORISSTRIATE MOSAIC VIRUS 54– PROTEIN 80 PY18K_SSVI HYPOTHETICAL 11 0 KDSULFOLOBUS VIRUS-LIKE PARTICLE 100– 141– PROTEIN SSVI 125 162PY206_ADE07 HYPOTHETICAL 20 6 KD HUMAN ADENOVIRUS TYPE 7 50– EARLYPROTEIN 73 PY25K_BNYVF RNA-3 HYPOTHETICAL 24 BEET NECROTIC YELLOW VEIN163– 7 KD PROTEIN MOSAIC VIRUS (ISOLATE F2) 188 PY29K_NPVAC HYPOTHETICAL29 9 KD AUTOGRAPHA CALIFORNICA NUCLEAR 90– PROTEIN POLYHEDROSIS VIRUS106 PY2_SOCMV HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE VIRUS 65–90 PY32K_SSVI HYPOTHETICAL 31 7 KD SULFOLOBUS VIRUS-LIKE PARTICLE 122–PROTEIN SSVI 142 PY6K0_SSVI HYPOTHETICAL 6 0 KD SULFOLOBUS VIRUS-LIKEPARTICLE 23– PROTEIN SSVI 44 PY7K4_VACCV HYPOTHETICAL 7 4 KD VACCINIAVIRUS (STRAIN WR) 21– PROTEIN 36 PYTK_MEASH HYPOTHETICAL 1 KD MEASLESVIRUS (STRAIN HALLE) 3– PROTEIN 25 PY7_SOCMV HYPOTHETICAL PROTEIN 7SOYBEAN CHLOROTIC MOTTLE VIRUS 96– 120 PY85K_SSVI HYPOTHETICAL 85 7 KDSULFOLOBUS VIRUS-LIKE PARTICLE 80– 155– 543– 657– 764– PROTEIN SSVI 105173 565 675 784 PY8_SOCMV HYPOTHETICAL PROTEIN SOYBEAN CHLOROTIC MOTTLEVIRUS 10– 27 PY97_ADE07 HYPOTHETICAL 9 7 KD HUMAN ADENOVIRUS TYPE 7 54–EARLY PROTEIN 77 PY9K2_SSVI HYPOTHETICAL 9 2 KD SULFOLOBUS VIRUS-LIKEPARTICLE 16– 62– PROTEIN SSVI 41 77 PYALI_EBV HYPOTHETICAL BALF1EPSTEIN-BARR VIRUS 205– PROTEIN (STRAIN B95-8) 220 PYB01_FOWPMHYPOTHETICAL BAMH1-ORF1 FOWLPOX VIRUS (ISOLATE HP- 354– PROTEIN438[MUNICH]) 374 PYB07_FOWPM HYPOTHETICAL BAMH1-ORF7 FOWLPOX VIRUS(ISOLATE HP- 104– PROTEIN 438[MUNICH]) 121 PYB09_FOWPM HYPOTHETICALBAMH1-ORF9 FOWLPOX VIRUS (ISOLATE HP- 49– PROTEIN 438[MUNICH]) 67PYB10_FOWPM HYPOTHETICAL BAMH1- FOWLPOX VIRUS (ISOLATE HP- 84– ORF10PROTEIN 438[MUNICH]) 100 PYB12_FOWPM HYPOTHETICAL BAMW- FOWLPOX VIRUS(ISOLATE HP- 114– 154– ORF 1 2 PROTEIN 438[MUNICH]) 134 169 PYBL2_SFV3LBEL-2 PROTEIN SIMIAN FOAMY VIRUS (TYPE 113– 3/STRAIN LK3) 128PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETROVIRUS 52– 78 PYDH1_HSVSCHYPOTHETICAL 28 7 KD HERPESVIRUS SAIMIRI (SUBGROUP 206– PROTEIN IN DHFRPROTIEN C/STRAIN 488) 230 PYDH3_HSVSC HYPOTHETICAL 9 5 KD HERPESVIRUSSAIMIRI (SUBGROUP 69– PROTEIN IN DHFR PROTEIN C/STRAIN 488) 90 PYEC4_EBVHYPOTHETICAL EC-RF 4 EPSTEIN-BARR VIRUS 200– PROTEIN (STRAIN B95-8) 222PYGA1_HSVMB HYPOTHETICAL 23 3 KD MAREK'S DISEASE HERPESVIRUS 175–PROTEIN (STRAIN BC-1) 190 PYGA1_HSVMM HYPOTHETICAL 23 6 KD MAREK'SDISEASE HERPESVIRUS 175– PROTEIN (STRAIN MD5) 190 PYHL4_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 101– HHLF4 (STRAIN AD169) 121PYHR3_VACCV HYPOTHETICAL HOST RANGE VACCINIA VIRUS (STRAIN WR) 86– 27 4KD PROTEIN 102 PYIO2_CVMA5 HYPOTHETICAL PROTEIN IN MURINE CORONAVIRUSMHV 141– NUCLEOCAPSID ORF 156 PYIOR_CVM1 HYPOTHETICAL PROTEIN IN MURINECORONAVIRUS MHV 141– NUCLEOCAPSID ORF 156 PY1OR_CVMS HYPOTHETICALPROTEIN IN MURINE CORONAVIRUS MHV 7– NUCLEOCAPSID ORF 33 PYKR2_EBVHYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS 67– PROTEIN (STRAIN B95-8) 90PYL12_ADE41 HYPOTHETICAL 8 0 KD HUMAN ADENOVIRUS TYPE 41 53– PROTEIN 73PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS 76– 128– 215– 330– (STRAINB95-8) 100 155 241 350 PYMSP_IRV22 HYPOTHETICAL 15 9 KD SIMULIUMIRIDESCENT VIRUS 23– PROTEIN (INSECT IRIDESCENT VIRUS TYPE 46 22)PYORI_ADEGI HYPOTHETICAL PROTEIN AVIAN ADENOVIRUS GALI (STRAIN 59–PHELPS) (FOWL ADENOVIRUS 1) 80 PYORI_COYMV HYPOTHETICAL 23 KD COMMELINAYELLOW MOTTLE VIRUS 56– PROTEIN 83 PYORI_TTVI HYPOTHETICAL 79 KDTHERMOPROTEUS TENAX VIRUS 1 13– PROTEIN (STRAIN KRAI) 40 PYOR2_COYMVHYPOTHETICAL 15 KD COMMELINA YELLOW MOTTLE VIRUS 23– PROTEIN 49PYOR2_EAV HYPOTHETICAL 256 KD EQUINE ARTERITIS VIRUS 165– PROTEIN 192PYOR2_LELV HYPOTHETICAL 284 KD LELYSTAD VIRUS 196– PROTEIN 212 PYOR_LVXHYPOTHETICAL 118 KD LILY VIRUS X 71– PROTEIN 92 PYOR3_NMV HYPOTHETICAL14 KD NARCISSUS MOSAIC VIRUS 7– PROTEIN 30 PYOR3_PVX HYPOTHETICAL 12 KDPOTATO VIRUS X 11– PROTEIN 34 PYOR3_PVXCP HYPOTHETICAL 12 KD POTATOVIRUS X (STRAIN CP) 11– PROTEIN 34 PYOR3_WCMVM HYPOTHETICAL 13 KD WHITECLOVER MOSAIC VIRUS 9– PROTEIN (STRAIN M) 29 PYOR3_WCMVO HYPOTHETICAL 13KD WHITE CLOVER MOSAIC VIRUS 9– PROTEIN (STRAIN 0) 31 PYOR5_ADEGIHYPOTHETICAL 315 KD AVIAN ADENOVIRUS GALI (STRAIN 69– PROTEIN PHELPS)(FOWL ADENOVIRUS I) 86 PYOR5_EAV HYPOTHETICAL 217 KD EQUINE ARTERITISVIRUS 139– PROTEIN 158 PYOR6_NMV HYPOTHETICAL 10 KD NARCISSUS MOSAICVIRUS 10– PROTEIN 26 PYORI_TTVI HYPOTHETICAL 166 KD THERMOPROTEUS TENAXVIRUS 1 13– PROTEIN (STRAIN KRAI) 32 PYORL_TTVI HYPOTHETICAL 165 KDTHERMOPROTEUS TENAX VIRUS 1 16– PROTEIN (STRAIN KRAI) 30 PYORM_TTVIHYPOTHETICAL 386 KD THERMOPROTEUS TENAX VIRUS 1 82– 233– PROTEIN (STRAINKRAI) 102 256 PYORP_TTVI HYPOTHETICAL 202 KD THERMOPROTEUS TENAX VIRUS 191– PROTEIN (STRAIN KRAI) 115 PYP24_RTBV HYPOTHETICAL P24 RICE TUNGROBACILLIFORM VIRUS 2– 104– PROTEIN 25 126 PYP24_RTBVP HYPOTHETICAL P24RICE TUNGRO BACILLIFORM VIRUS 2– 104– PROTEIN (ISOLATE PHILIPPINES) 25126 PYP47_NPVAC HYPOTHETICAL 435 KD AUTOGRAPHA CALIFORNICA NUCLEAR 211–PROTEIN IN P47 3 REGION POLYHEDROSIS VIRUS 234 PYP62_NPVOP HYPOTHETICAL122 KD ORGYIA PSEUDOTSUGATA 82– PROTEIN IN P6 5 5 MULTICAPSIDPOLYHEDROSIS VIRUS 108 REGION (OP PYP64_NPVOP HYPOTHETICAL 400 KD ORGYIAPSEUDOTSUGATA 27– 215– PROTEIN IN P6 5 5 MULTICAPSID POLYHEDROSIS VIRUS54 230 REGION (OP PYP7B_TNVD HYPOTHETICAL P7B TOBACCO NECROSIS VIRUS 13–PROTEIN (STRAIN D) (TNV) 31 PYPO4_NPVLD HYPOTHETICAL 15 KD LYMANTRIADISPAR MULTICAPSID 16– PROTEIN IN POL 3 REGION NUCLEAR POLYHEDROSISVIRUS 35 PYRF1_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS (TYPE 42–RF1 6/STRAIN GS) 66 PYRF2_HSVSG HYPOTHETICAL PROTEIN HERPES SIMPLEXVIRUS (TYPE 55– RF2 6/STRAIN GS) 74 PYRF3_HSV6G HYPOTHETICAL PROTEINHERPES SIMPLEX VIRUS (TYPE 32– RF3 6/STRAIN GS) 56 PYFP1_IRV6 REPETITIVEPROTEIN ORF1 CHILO IRIDESCENT VIRUS (CIV) 20– (INSECT IRIDESCENT VIRUSTYPE 43 6) PYRP4_IRV6 REPETITIVE PROTEIN ORF4 CHILO IRIDESCENT VIRUS(CIV) 44– (INSECT IRIDESCENT VIRUS TYPE 69 6) PYRP5_IRV6 REPETITIVEPROTEIN ORF5 CHILO IRIDESCENT VIRUS (CIV) 98– 179– 260– (INSECTIRIDESCENT VIRUS TYPE 123 204 285 6) PYRR1_EBV HYPOTHETICAL BRRF1EPSTEIN-BARR VIRUS 199– PROTEIN (STRAIN B95-8) 223 PYRR2_EBVHYPOTHETICAL BRRF2 EPSTEIN-BARR VIRUS 164– PROTEIN (STRAIN B95-8) 182PYSR1_EBV HYPOTHETICAL BSRF1 EPSTEIN-BARR VIRUS 92– PROTEIN (STRAINB95-8) 113 PYTR1_EBV HYPOTHETICAL BTRF1 EPSTEIN-BARR VIRUS 383– PROTEIN(STRAIN B95-8) 401 PYUB2_NPVOP HYPOTHETICAL 240 KD ORGYIA PSEUDOTSUGATA133– PROTEIN MULTICAPSID POLYHEDROSIS VIRUS 152 (OP PYVAE_VACCCHYPOTHETICAL 182 KD VACCINIA VIRUS (STRAIN 82– 140– PROTEIN COPENHAGEN)99 156 PYVAF_VACCC HYPOTHETICAL 84 KD VACCINIA VIRUS (STRAIN 17– 51–PROTEIN COPENHAGEN) 40 68 PYVAL_VACCV HYPOTHETICAL 99 KD VACCINIA VIRUS(STRAIN WR), 21– PROTEIN AND VACCINIA VIRUS (STRAIN COPE 43 PYVAT_VACCVHYPOTHETICAL 89 KD VACCINIA VIRUS (STRAIN WR), 28– PROTEIN AND VACCINIAVIRUS (STRAIN COPE 46 PYVBE_VACCV HYPOTHETICAL 105 KD VACCINIA VIRUS(STRAIN WR), 9– PROTEIN AND VACCINIA VIRUS (STRAIN COPE 28 PYVBG_VACCCHYPOTHETICAL 112 KD VACCINIA VIRUS (STRAIN 37– PROTEIN COPENHAGEN) 54PYVCA_VACCC HYPOTHETICAL 80 KD VACCINIA VIRUS (STRAIN 18– PROTEINCOPENHAGEN) 35 PYVD2_VACCV HYPOTHETICAL 86 KD VACCINIA VIRUS (STRAINWR), 5– 36– PROTEIN AND VACCINIA VIRUS (STRAIN COPE 26 52 PYVDA_VACCCHYPOTHETICAL 92 KD VACCINIA VIRUS (STRAIN 22– 44– PROTEIN COPENHAGEN) 3864 PYVDA_VACCV HYPOTHETICAL 92 KD VACCINIA VIRUS (STRAIN WR) 3– 22– 44–PROTEIN 18 38 64 PYVFA_VACCC HYPOTHETICAL 71 KD VACCINIA VIRUS (STRAIN48– PROTEIN COPENHAGEN) 67 PYVFF_VACCC HYPOTHETICAL 88 KD VACCINIA VIRUS(STRAIN 23– PROTEIN COPENHAGEN) 42 PYVGA_VACCC HYPOTHETICAL 143 KDVACCINIA VIRUS (STRAIN 105– PROTEIN COPENHAGEN) 127 PYVKB_VACCCHYPOTHETICAL 90 KD VACCINIA VIRUS (STRAIN 54– PROTEIN COPENHAGEN) 70PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS 150– PROTEIN (STRAINB95-8) 166

TABLE XIV SEARCH RESULTS SUMMARY FOR P23TLZIPC MOTIF PCGENE P23CTLZIPAll Viruses (no bacteriophages) AREA AREA AREA AREA AREA AREA AREA FILENAME PROTEIN VIRUS 1 2 3 4 5 6 7 PPOL2_TBRVS RNA2 POLYPROTEIN TOMATOBLACK RING VIRUS (STRAIN S) 617– 1041–  (TBRV) 651 1077 PPOL2_TRSVR RNA2POLYPROTEIN TOMATO RINGSPOT VIRUS (ISOLATE 316– RASPBERRY) (TOMRSV) 347PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27)1833–  2001–  (BEV) 1866 2037 PPOLG_BVDVN GENOME POLYPROTEIN BOVINEVIRAL DIARRHEA VIRUS 102– 1650–  3220– (ISOLATE NADL) 135 1678 3248PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 102– 1560– 3130– (STRAIN SD-1) 135 1588 3158 PPOLG_BYMV GENOME POLYPROTEIN BEANYELLOW MOSAIC VIRUS 226– 255 PPOLG_COXA2 GENOME POLYPROTEINCOXSACKIEVIRUS A21 (STRAIN COE) 1120–  1157 PPOLG_COXA3 GENOMEPOLYPROTEIN COXSACKIEVIRUS A23 (ECHO 9 VIRUS)  67– (EC-9-V) 99PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN GRIGGS) 1601– 1633 PPOLG_COXB1 GENOME POLYPROTEIN COXSACKIEVIRUS B1 1582–  1614PPOLG_COXB3 GENOME POLYPROTEIN COXSACKIEVIRUS B3 1585–  1617 PPOLG_COXB4GENOME POLYPROTEIN COXSACKIEVIRUS B4 1583–  1615 PPOLG_COXB5 GENOMEPOLYPROTEIN COXSACKIEVIRUS B5 835– 1585–  868 1617 PPOLG_DENI5 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 1111–  1485–  2401– SINGAPORE5275/90) 1145 1519 2434 PPOLG_DENIW GENOME POLYPROTEIN DENGUE VIRUS TYPE1 (STRAIN 1112–  WESTERN PACIFIC) 1146 PPOLG_DEN26 GENOME POLYPROTEINDENGUE VIRUS TYPE 2 (STRAIN 16681)  61– 1112–  95 1146 PPOLG_DEN27GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-  61– 1112–  PDK53)95 1146 PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIND2-04)  61– 95 PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2(STRAIN  61– 1112–  JAMAICA) 95 1146 PPOLG_DEN2N GENOME POLYPROTEINDENGUE VIRUS TYPE 2 (STRAIN NEW 364– GUINEA C) 398 PPOLG_DEN2P GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN  61– 1112–  PR159/S1) 95 1146PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 832–1974 866 PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3  61– 2399– 95 2432 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4  60– 94PPOLG_ECHG GENOME POLYPROTEIN ECHOVIRUS II (STRAIN GREGORY) 774– 806PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 1194–  1463– 1226 1501 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS(STRAIN 1196–  1465–  EMC-B NONDIABETOGENIC) 1228 1503 PPOLG_EMCVDGENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS (STRAIN 1196–  1465– EMC-D DIABETOGENIC) 1228 1503 PPOLG_FMDVI GENOME POLYPROTEINFOOT-AND-MOUTH DISEASE VIRUS 1036–  1098–  1167– 1465– (STRAIN A10-61)(APHTHOVIRUS A) 1064 1133 1199 1501 PPOLG_FMDVA GENOME POLYPROTEINFOOT-AND-MOUTH DISEASE VIRUS 1036–  1098–  1167– 1465– (STRAIN A12)(APHTHOVIRUS A) 1074 1133 1199 1501 PPOLG_FMDVO GENOME POLYPROTEINFOOT-AND-MOUTH DISEASE VIRUS 1098–  1167–  1465– (STRAINS O1K AND O1BFS)1133 1199 1501 PPOLG_HCVI GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE 1) (HCV) 1640–  1670 PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERAVIRUS (STRAIN ALFORT) 1363–  1560–  3131– (SWINE FEVER VIRUS) 1393 15883159 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN BRESCIA)102– 1560–  3131– (SWINE FEVER VIRUS) 135 1588 3159 PPOLG_HCVBK GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 1640–  (HCV) 1670 PPOLG_HCVIIGENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) (HCV) 1640–  1670PPOLG_HCVH4 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-476) 254–(HCV) 291 PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATEHC-J6) 711– (HCV) 742 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE HC-J8) 711– 1893–  (HCV) 742 1924 PPOLG_HCVJA GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1640–  JAPANESE) (HCV) 1670PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-JT) 1640– (HCV) 1670 PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATETAIWAN) 1640–  (HCV 1670 PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS AVIRUS (STRAIN 24A) 1514–  2068–  1550 2099 PPOLG_HPAV4 GENOMEPOLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C) 1514–  2068–  1550 2099PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 18F) 1514– 2068–  1550 2099 PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAIN HM-175) 1515–  2069–  1551 2100 PPOLG_HPAVL GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN LA) 1515–  2069–  1551 2100 PPOLG_HPAVM GENOMEPOLYPROTEIN HEPATITIS A VIRUS (STRAIN MUII) 1515–  2069–  1551 2100PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN 831–1517–  AGM-27) 868 1553 PPOLG_HRVI4 GENOME POLYPROTEIN HUMAN RHINOVIRUS14 (HRV-14) 1094–  2005–  1132 2041 PPOLG_HRVIB GENOME POLYPROTEIN HUMANRHINOVIRUS 1B (HRV-1B) 1453–  1816–  1983– 1485 1849 2019 PPOLG_HRV2GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 1446–  1809–  1976– 14751842 2012 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS R9 (HRV-89)1460–  1823–  1990– 1402 1856 2026 PPOLG_HUEV7 GENOME POLYPROTEIN HUMANENTEROVIRUS 70 (STRAIN 1108–  J670/71 1145 PPOLG_IBDVO STRUCTURALPOLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE 222– VIRUS (STRAIN OH) 260PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  61– 1233– 1516– 2779– 3274– (STRAIN SA-14) 93 1269 1549 2813 3311 PPOLG_JAEV5GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  61– 1233–  1516– 2779–3274– (STRAIN SA(V)) 95 1269 1549 2813 3311 PPOLG_JAEVJ GENOMEPOLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  61– 1233–  1516– 2779– 3274–(STRAIN JAOARS982) 95 1269 1549 2813 3311 PPOLG_JAEVN GENOME POLYPROTEINJAPANESE ENCEPHALITIS VIRUS 1161–  (STRAIN NAKAYAMA) 1197 PPOLG_KUNJMGENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C)  61– 561– 3275– 95 5943312 PPOLG_LANVT GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 1157– 1519–  2230– 2366– 3095– 1188 1551 2264 2398 3132 PPOLG_MCFA GENOMEPOLYPROTEIN MOSQUITO CELL FUSING AGENT (CFA 1174–  1330–  FLAVIVIRUS)1206 1359 PPOLG_MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS (MDMV)322– 351 PPOLG_MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS 61– 1305–  95 1342 PPOLG_OMV GENOME POLYPROTEIN ORNITHOGALUM MOSAICVIRUS 344– 376 PPOLG_PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS(CALIFORNIA 826– 1086–  ISOLATE) (PEMV) 859 1124 PPOLG_POL1M GENOMEPOLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1121–  1158 PPOLG_POL1SGENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN) 1122–  1159PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN LANSING) 1120– 1157 PPOLG_POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2)1120–  1157 PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN23127) 1119–  1156 PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3(STRAINS P3/ 1119–  LEON/37 AND P3/LEON 12A[1]B) 1156 PPOLG_PPVD GENOMEPOLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) (PPV) 2960–  3084–  2991 3113PPOLG_PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR)1337–  1461–  (PPV) 1368 1490 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POXPOTYVIRUS (ISOLATE NAT) 2944–  3068–  (PPV) 2975 3097 PPOLG_PPVRA GENOMEPOLYPROTEIN PLUM POX POTYVIRUS (STRAIN 2959–  3083–  RANKOVIC) (PPV)2990 3112 PPOLG_PSBMV GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC VIRUS(STRAIN 931– 1411–  3149– DPDI) 966 1445 3178 PPOLG_PVYHU GENOMEPOLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN) 1302–  3004–  (PVY) 13363033 PPOLG_PVYN GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN N) (PVY)1302–  1336 PPOLG_PYFVI GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS(ISOLATE 230– 1110–  1903– P-121) (PYFV)) 262 1139 1931 PPOLG_SBMVNGENOME POLYPROTEIN SOYBEAN MOSAIC VIRUS (STRAIN N) 245– 274 PPOLG_STEVMGENOME POLYPROTEIN ST LOUIS ENCEPHALITIS VIRUS (STRAIN  61– 1301– MSI-7) 95 1331 PPOLG_SUMVS GENOME POLYPROTEIN SUGARCANE MOSAIC VIRUS(STRAIN SC) 307– 336 PPOLG_SVDVH GENOME POLYPROTEIN SWINE VESICULARDISEASE VIRUS 1585–  (STRAIN H/J ′76) 1617 PPOLG_SVDVU GENOMEPOLYPROTEIN SWINE VESICULAR DISEASE VIRUS 1585–  (STRAIN UKG/27/72) 1617PPOLG_TBEV5 GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 835– 1157– 2366– 3003– (STRAIN SOFJIN) (TBEV) 869 1188 2398 3130 PPOLG_TBEVW GENOMEPOLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 1157–  2366–  3095– (WESTERNSUBTYPE) (TBEV) 1188 2398 3132 PPOLG_TEV GENOME POLYPROTEIN TOBACCO ETCHVIRUS (TEV) 827– 2998–  865 3027 PPOLG_TMEVD GENOME POLYPROTEINTHEILER's MURINE ENCEPHALOMYELITIS 1074–  1193–  1470– 1908– VIRUS(STRAIN BEAN 8386) 1102 1221 1508 1939 PPOLG_TMEVD GENOME POLYPROTEINTHEILER's MURINE ENCEPHALOMYELITIS 1072–  1193–  1408– 1906– VIRUS(STRAIN DA) 1102 1219 1506 1937 PPOLG_TMEVG GENOME POLYPROTEIN THEILER'sMURINE ENCEPHALOMYELITIS 1074–  1193–  1470– 1908– VIRUS (STRAIN GDVH)1102 1221 1508 1939 PPOLG_TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS(TUMV) 1573–  1602 PPOLG_TVMV GENOME POLYPROTEIN TOBACCO VEIN MOTTLINGVIRUS (TVMV) 2698–  2731 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAICVIRUS II 958– 987 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS  61– 557–3272– 95 590 3309 PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS(STRAIN 170) 1157–  1228–  1495– 2308– 3092– 1186 1266 1531 2340 3127PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN PASTEUR 1157– 1228–  1495– 2308– 3092– 17D-204) 1186 1266 1531 2340 3127 PPOLG_ZYMVGENOME POLYPROTEIN ZUCCHINI YELLOW MOSAIC VIRUS (ZYMV) 329– 358PPOLH_POLIM GENOME POLYPROTEIN POLIOVIRUS TYPE I (STRAIN MAHONEY) 1122– 1159 PPOLH_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 244– 273PPOLN_EEVVT NONSTRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS613– 1436–  VIRUS (STRAIN TRINIDAD DONKEY) 648 1468 PPOLN_FCVC6NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN CFV68 327– FIV)(FCV) 365 PPOLN_FCVF4 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS(STRAIN JAPANESE 300– F4) (FCV) 333 PPOLN_FCVF9 NON-STRUCTURALPOLYPROTEIN FELINE CALICIVIRUS (STRAIN F9) 803– (FCV) 841 PPOLN_HEVBISNON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN BURMA) 1618–  (HEV)1652 PPOLN_HEVME NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAINMEXICO) 1616–  (HEV) 1650 PPOLN_HEIMY NON-STRUCTURAL POLYPROTEINHEPATITIS E VIRUS (STRAIN MYANMAR) 1618–  (HEV) 1652 PPOLN_HEVPANON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN PAKISTAN) 1617– (HEV) 1651 PPOLN_MIDDV NONSTRUCTURAL POLYPROTEIN MIDDELBURG VIRUS  25–57 PPOLN_OHRVG NONSTRUCTURAL POLYPROTEIN ONYONG-NYONG VIRUS (STRAINGULU) 1144–  1404–  (ONN) 1180 1439 PPOLN_RHDV NON-STRUCTURALPOLYPROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 299– 1562–  (RHDV 337 1594PPOLN_SFV NONSTRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1146–  1406– 1175 1441 PPOLN_SINDO NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPEOCKELBO/ 1454–  STRAIN EDSBYN 82-5) 1486 PPOLN_SINDV NONSTRUCTURALPOLYPROTEIN SINDBIS VIRUS (STRAIN HRSP) 1454–  1486 PPOLS_EEEVSTRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 524– 556PPOLS_EEEV3 STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS525– (STRAIN VA33[TEN BROECK]) 557 PPOLS_EEVVB STRUCTURAL POLYPROTEINVENEZUELAN EQUINE ENCEPHALITIS 1203–  VIRUS (STRAIN TC-83) 1239PPOLS_EEVVT STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS 1203– VIRUS (STRAIN TRINIDAD DONKEY) 1239 PPOLS_ONNVG STRUCTURAL POLYPROTEIN ONYONG-NYONG VIRUS (STRAIN GULU) 1150–  1201–  (ONN) 1182 1235 PPOLS_RRVNSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 1216–  (RRV)1250 PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T4R)(RRV) 1216–  1250 PPOLS_SFV STRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS1215–  1251 PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPEOCKELBO/ 1197–  STRAIN EDSBYN 82-5) 1233 PPOLS_SINDV STRUCTURALPOLYPROTEIN SINDBIS VIRUS (STRAINS HRSP AND 1197–  HRLP) 1233 PPOLS_WEEVSTRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 1188–  1224PPOL_BIVO6 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 742– (ISOLATE106) (BIV) 773 PPOL_BIV27 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS742– (ISOLATE 127) (BIV) 773 PPOL_BLVAU POL POLYPROTEIN BOVINE LEUKEMIAVIRUS (AUSTRALIAN 343– ISOLATE) (BLV) 374 PPOL_CAEVC POL POLYPROTEINCAPRINE ARTHRITIS ENCEPHALITIS 206– 322– VIRUS (STRAIN CORK) (CAEV) 240355 PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 1234– 1484–  1750– 1800– (COYMV) 1267 1518 1788 1831 PPOL_EIAV9 POLPOLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 166– 506– (CLONE 1369) (E1AV)198 539 PPOL_EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 166–506– (CLONE CL22) (E1AV) 198 539 PPOL_EIAVY POL POLYPROTEIN EQUINEINFECTIOUS ANEMIA VIRUS 166– 505– (ISOLATE WYOMING) (E1AV) 198 538PPOL_FOAMV POL POLYPROTEIN HUMAN SPUMARETROVIRUS (FOAMY VIRUS) 126– 154PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 348– 378 PPOL_HTL1APOL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 657– (STRAIN ATK)(HTLV-1) 688 PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE1 657– (CARIBBEAN ISOLATE) (HTLV-1) 688 PPOL_HVIA2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 331– 500– (ARV2/SF2 ISOLATE) (HIV-1) 364537 PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343–512– (BH10 ISOLATE) (HIV-1) 376 549 PPOL_HV1B5 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 343– 512– (BH5 ISOLATE) (HIV-1) 376 549PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343– 512–(BRU ISOLATE) (HIV-1) 376 549 PPOL_HV1EL POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 330– 499– (EL1 ISOLATE) (HIV-1) 363 536PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331– 500–(HXB2 ISOLATE) (HIV-1) 364 537 PPOL_HV1JR POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 335– 504– TYPE 1 (JRCSF ISOLATE) (HIV-1) 368541 PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330–(MAL ISOLATE) (HIV-1) 363 PPOL_HV1MN POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 334– 503– (MN ISOLATE) (HIV-1) 367 540PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331– 500–(NEW YORK-5 ISOLATE) (HIV-1) 364 537 PPOL_HV1ND POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 330– 499– (NDK ISOLATE) (HIV-1) 363 536PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331– 500–(OY1 ISOLATE) (HIV-1) 364 537 PPOL_HV1PV POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 343– 512– (PV22 ISOLATE) (HIV-1) 376 549PPOL_HV1RB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330– 499–(RF/HAT ISOLATE) (HIV-1) 363 536 PPOL_HV1U4 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 330– 499– (STRAIN UGANDAN/ISOLATE 363 536PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330– 499–(Z2/CDC-Z34 ISOLATE) (HIV-1) 363 536 PPOL_HV2CA POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 353– (ISOLATE CAM2) (HIV-2) 386 PPOL_HV2NZPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 353– (ISOLATE NIH-Z)(HIV-2) 386 PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE2 354– (ISOLATE ROD) (HIV-2) 387 PPOL_IPHA PUTATIVE POL POLYPROTEINHAMSTER INTRACISTERNAL A-PARTICLE 460– (1AP-1118 496 PPOL_J5RV POLPOLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 186– 220 PPOL_MPMV POLPOLYPROTEIN SIMIAN MASON-PFIZER VIRUS (MPMV) 650– 681 PPOL_OMVVS POLPOLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV)  61– 102–  182–  298– 98130 216 331 PPOL_RTBV POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 788–891– 1399– (RTBV) 824 919 1433 PPOL_RTBVP POLYPROTEIN RICE TUNGROBACILLIFORM VIRUS 788– 891– 1399– (ISOLATE PHILIPPINES) (RTVB) 824 9191433 PPOL_SFV3L POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN 337–LK3) (SFV-3) 365 PPOL_SIVO POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCYVIRUS 355– 524– (SLV(CPZ)) (CIV) 388 561 PPOL_SOCMV ENZYMATICPOLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS  17–  58– 55 89 PPOL_SRV1 POLPOLYPROTEIN SIMIAN RETROVIRUS SRV-1 650– 681 PPOL_VILV POL POLYPROTEINVISNA LENTIVIRUS (STRAIN 1514)  80– 201–  317– 117 235 350 PPOL_VILV1POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE  80– 317– LVI-1KS1)117 350 PPOL_VILV2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE 80– 201–  317– LVI-1KS2) 117 235 350 PPP41_H5V6G PHOSPHOPROTEIN P41HERPES SIMPLEX VIRUS (TYPE 6/  60– STRAIN GS) 91 PPTP_NPVACPROTEIN-TYROSINE PHOSPHATASE AUTOGRAPHA CALIFORNICA NUCLEAR  53–POLYHEDROSIS VIRUS 85 PREEP_CSV REPEAT ELEMENT PROTEIN CAMPOLETISSONORENSIS VIRUS (CSV) 113– 149 PREV_BIV27 REV PROTEIN BOVINEIMMUNODEFICIENCY VIRUS  74– (ISOLATE 127) (BIV) 109 PREV_EIAV9 REVPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS  44– (CLONE 1369) (EIAV) 79PREV_EIAVC REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS  44– (CLONE CL22)(EIAV) 79 PREV_EIAVY REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS  74–(ISOLATE WYOMING) (EIAV) 109 PREV_SIVAT REV PROTEIN SIMIANIMMUNODEFICIENCY VIRUS  25– (TYO-1 ISOLATE) (SIV-AGM) 62 PRIRI_ASFM2RIBONUCLEOSIDE- AFRICAN SWINE FEVER VIRUS (ISOLATE 630– DIPHOSPHATEREDUCTASE LARGE CH MALAWI LIL 20/1) (ASFV) 666 PRIRI_HCMVARIBONUCLEOSIDE- HUMAN CYTOMEGALOVIRUS (STRAIN 279– 393–  449–DIPHOSPHATE REDUCTASE LARGE CH AD169) 311 430 477 PRIRI_HSVEBRIBONUCLEOSIDE- EQUINE HERPESVIRUS TYPE 1 (STRAIN  60– 503– DIPHOSPHATEREDUCTASE LARGE CH AB4P) (EHV-1) 92 531 PRIRI_VACCC RIBONUCLEOSIDE-VACCINIA VIRUS (STRAIN COPENHAGEN) 203– DIPHOSPHATE REDUCTASE LARGE CH235 PRIRI_VACCV RIBONUCLEOSIDE- VACCINIA VIRUS (STRAIN WR) 203–DIPHOSPHATE REDUCTASE LARGE CH 235 PRIRI_VARV RIBONUCLEOSIDE- VARIOLAVIRUS 203– DIPHOSPHATE REDUCTASE LARGE CH 235 PRIRI_VZVD RIBONUCLEOSIDE-VARICELLA-ZOSTER VIRUS (STRAIN  34– 221–  488– DIPHOSPHATE REDUCTASELARGE CH DUMAS) (VZV) 72 254 516 PRMIL_AVEVR RML SERINE/ AVIANROUS-ASSOCIATED VIRUS TYPE 1 149– THREONINE-PROTEIN KINASE TRANSFORM 177PRMIL_IIVI RMIL SERINE/ AVIAN RETROVIRUS 1C10 133– THREONINE-PROTEINKINASE TRANSFORM 161 PRP94_VACCV RNA-POLYMERASE- VACCINIA VIRUS (STRAINWR), AND 399– ASSOCIATED TRANSCRIPTION SPECIF VACCINIA VIRUS (STRAINCOPENHAGE 427 PRP94_VARV RNA-POLYMERASE- VARIOLA VIRUS 399– ASSOCIATEDTRANSCRIPTION SPECIF 427 PRPO1_VACCV DNA-DIRECTED RNA POLYMERASE 147 KDPOLYPEPTIDE VACCINIA VIRUS (STRAIN WR) 1005–  1033 PRPO2_CAPVKDNA-DIRECTED RNA POLYMERASE 132 KD POLYTEPTIDE CAPRIPOXVIRUS (STRAINKS-1) 297– 667– 333 696 PRPO2_COWPX DNA-DIRECTED RNA POLYMERASE 132 KDPOLYPEPTIDE COWPOX VIRUS (CPV) 202– 542– 236 578 PRPO2_VACCVDNA-DIRECTED RNA POLYMERASE 132 KD POLYPEPTIDE VACCINIA VIRUS (STRAINWR), AND 202– 542– VACCINIA VIRUS (STRAIN COPENHAGE 236 578 PRPO2_VARVDNA-DIRECTED RNA POLYMERASE 132 KD POLYPEPTIDE VARIOLA VIRUS 202– 542–236 578 PRPO7_VACCV DNA-DIRECTED RNA POLYMERASE 19 KD POLYPEPTIDEVACCINIA VIRUS (STRAIN WR), AND  38– VACCINIA VIRUS (STRAIN COPENHAGE 66PRPO7_VARV DNA-DIRECTED RNA POLYMERASE 19 KD POLYPEPTIDE VARIOLA VIRUS 38– 66 PRPO8_FOWP1 DNA-DIRECTED RNA POLYMERASE 18 KD POLYPEPTIDEFOWLPOX VIRUS (STRAIN FP-1)  57– 88 PRPOA_LELV RNA-DIRECTED RNAPOLYMERASE LELYSTAD VIRUS (LV) 1233–  3133–  3426– 1268 3163 3457PRPOL_EAV RNA-DIRECTED RNA POLYMERASE EQUINE ARTERITIS VIRUS (EAV) 171–3041–  207 3072 PRRP1_DHVII RNA-DIRECTED RNA POLYMERASE SUBUNIT P1 DHORVIRUS (STRAIN INDIAN/1313/61)  96– 199– (DHO) 125 234 PRRP1_IAV17RNA-DIRECTED RNA POLYMERASE SUBUNIT P1 INFLUENZA A VIRUS (STRAIN A/ 138–VICTORIA/3/75) 170 PRRP1_INCJJ RNA-DIRECTED RNA POLYMERASE SUBUNIT P1INFLUENZA C VIRUS (STRAIN C/33/50) 564– 598 PRRP2_IAANN RNA-DIRECTED RNAPOLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/ANN 398– 484–ARBOR/6/60) 435 518 PRRP2_IADH2 RNA-DIRECTED RNA POLYMERASE SUBUNIT P2INFLUENZA A VIRUS (STRAIN A/DUCK/ 484– HOKKAIDO/8/80) 518 PRRP2_IAFPRRNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/FOWL484– PLAGUE VIRUS/ROSTOCK/34) 518 PRRP2_IAGU2 RNA-DIRECTED RNAPOLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/GULL/ 484–MARYLAND/704/77) 515 PRRP2_IAHLO RNA-DIRECTED RNA POLYMERASE SUBUNIT P2INFLUENZA A VIRUS (STRAIN A/EQUINE/ 484– LONDON/1416/73) 515 PRRP2_IAHTERNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAINA/EQUINE/ 484– TENNESSEE/5/86) 518 PRRP2_IAKOR RNA-DIRECTED RNAPOLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/KOREA/ 484– 426/68)518 PRRP2_IALE1 RNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS(STRAIN A/ 484– LENINGRAD/134/57) 518 PRRP2_IALE2 RNA-DIRECTED RNAPOLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/ 484–LENINGRAD/134/17/57) 518 PRRP2_IAMAN RNA-DIRECTED RNA POLYMERASE SUBUNITP2 INFLUENZA A VIRUS (STRAIN A/ 484– MALLARD/NEW YORK/6750/78) 518PRRP2_IANT6 RNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS(STRAIN A/NT/60/ 484– 68 518 PRRP2_IAP10 RNA-DIRECTED RNA POLYMERASESUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/ 484– PINTAIL/ALBERTA/119/79) 518PRRP2_IAPUE RNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS(STRAIN A/PUERTO 484– RICO/8/34 518 PRRP2_IARUD RNA-DIRECTED RNAPOLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/RUDDY 484–TURNSTONE/NEW JERSEY/47/85) 518 PRRP2_IASIN RNA-DIRECTED RNA POLYMERASESUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/ 484– SINGAPORE/1/57) 518PRRP2_IATKM RNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS(STRAIN A/TURKEY/ 484– MINNESOTA/833/80) 518 PRRP2_IAV17 RNA-DIRECTEDRNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/ 484–VICTORIA/3/75) 518 PRRP2_IAWIL RNA-DIRECTED RNA POLYMERASE SUBUNIT P2INFLUENZA A VIRUS (STRAIN A/ 484– WILSON-SMITH/33) 518 PRRP2_IAZH2RNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAINA/SWINE/ 484– HONG KONG/81/78) 518 PRRP2_IAZH3 RNA-DIRECTED RNAPOLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAIN A/SWINE/ 484– HONGKONG/126/82) 518 PRRP2_IAZ11 RNA-DIRECTED RNA POLYMERASE SUBUNIT P2INFLUENZA A VIRUS (STRAIN A/SWINE/ 484– IOWA/15/30) 518 PRRP2_IAZTFRNA-DIRECTED RNA POLYMERASE SUBUNIT P2 INFLUENZA A VIRUS (STRAINA/SWINE/ 484– TENNESSEE/26/77) 518 PRRP3_IABUD RNA-DIRECTED RNAPOLYMERASE SUBUNIT P3 INFLUENZA A VIRUS (STRAIN A/ 515– 585–BUDGERIGAR/HOKKAIDO/1/77) 553 613 PRRP3_IAFPR RNA-DIRECTED RNAPOLYMERASE SUBUNIT P3 INFLUENZA A VIRUS (STRAIN A/FOWL 585– PLAGUEVIRUS/ROSTOCK/34) 613 PRRP3_IAFPW RNA-DIRECTED RNA POLYMERASE SUBUNIT P3INFLUENZA A VIRUS (STRAIN A/FOWL 579– PLAGUE VIRUS/WEYBRIDGE) 613PRRP3_IAGU2 RNA-DIRECTED RNA POLYMERASE SUBUNIT P3 INFLUENZA A VIRUS(STRAIN A/GULL/ 585– MARYLAND/704/77) 613 PRRP3_IAGUA RNA-DIRECTED RNAPOLYMERASE SUBUNIT P3 INFLUENZA A VIRUS (STRAIN A/GULL/ 585–ASTRAKHAN/227/84) 613 PRRP3_IAHPR RNA-DIRECTED RNA POLYMERASE SUBUNIT P3INFLUENZA A VIRUS (STRAIN A/EQUINE/ 585– PRAGUE/1/56) 613 PRRP3_IAMANRNA-DIRECTED RNA POLYMERASE SUBUNIT P3 INFLUENZA A VIRUS (STRAIN A/ 585–MALLARD/NEW YORK/6750/78) 613 PRRP3_IARUD RNA-DIRECTED RNA POLYMERASESUBUNIT P3 INFLUENZA A VIRUS (STRAIN A/RUDDY 585– TURNSTONE/NEWJERSEY/47/85) 613 PRRP3_IASE2 RNA-DIRECTED RNA POLYMERASE SUBUNIT P3INFLUENZA A VIRUS (STRAIN A/SEAL/ 585– MASSACHUSETTS/133/82) 613PRRP3_IATKM RNA-DIRECTED RNA POLYMERASE SUBUNIT P3 INFLUENZA A VIRUS(STRAIN A/TURKEY/ 585– MINNESOTA/833/80) 613 PRRP3_IAZI1 RNA-DIRECTEDRNA POLYMERASE SUBUNIT P3 INFLUENZA A VIRUS (STRAIN A/SWINE/ 585–IOWA/15/30) 613 PRRP3_IAZTE RNA-DIRECTED RNA POLYMERASE SUBUNIT P3INFLUENZA A VIRUS (STRAIN A/SWINE/ 585– TENNESSEE/24/77) 613 PRRP3_INBACRNA-DIRECTED RNA POLYMERASE SUBUNIT P3 INFLUENZA B VIRUS (STRAIN B/ANN735– ARBOR/1/66 [COLD-ADAPTED]) 769 PRRP3_INBAD RNA-DIRECTED RNAPOLYMERASE SUBUNIT P3 INFLUENZA B VIRUS (STRAIN B/ANN 735– ARBOR/1/66[WILD-TYPE]) 769 PRRP3_INCBE RNA-DIRECTED RNA POLYMERASE SUBUNIT P3INFLUENZA C VIRUS (STRAIN C/BERLIN/ 609– 1/85) 641 PRRP3_INCJJRNA-DIRECTED RNA POLYMERASE SUBUNIT P3 INFLUENZA C VIRUS (STRAINC/JJ/50) 609– 641 PRRP3_THOGV RNA-DIRECTED RNA POLYMERASE SUBUNIT P3THOGOTO VIRUS (THO) 109– 324– 145 356 PRRPA_CVH22 RNA-DIRECTED RNAPOLYMERASE HUMAN CORONAVIRUS (STRAIN 229E) 410– 712– 1262– 1963– 2078–2474– 3153– 443 745 1295 1999 2112 2508 3191 PRRPA_CVMJH RNA-DIRECTEDRNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN JHM) 708– 3544–  3757–3933– 740 3577 3785 3961 PRRPB_BEV RNA-DIRECTED RNA POLYMERASE BERNEVIRUS (BEV) 941– 2137–  2178– 969 2169 2206 PRRPB_CVMA5 RNA-DIRECTED RNAPOLYMERASE MURINE CORONAVIRUS MHV (STRAIN A59) 346– 684– 1689– 2698– 380714 1722 2730 PRRPB_CVMJH RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUSMHV (STRAIN JHM) 346– 684– 1687– 2356– 2696– 380 714 1720 2391 2728PRRPB_CVPFS RNA-DIRECTED RNA POLYMERASE PORCINE TRANSMISSIBLE 173– 322– 482– GASTROENTERITIS CORONAVIRUS 207 350 515 PRRPB_CVPR8 RNA-DIRECTEDRNA POLYMERASE PORCINE RESPIRATORY CORONAVIRUS  80– 113 PRRPB_IBVBRNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS 636–(STRAIN BEAUDETTE) (IBV) 670 PRRPL_BUNYW RNA POLYMERASE BUNYAMWERA VIRUS303– 1096–  331 1128 PRRPL_HANTV RNA POLYMERASE HANTAAN VIRUS (STRAIN76-118) 1938–  (KOREAN HEMORRHAGIC FEVER VIRUS) 1971 PRRPL_HRSVA RNAPOLYMERASE BETA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 892– 1181– (STRAIN A2) 922 1213 PRRPL_MABVM RNA-DIRECTED RNA POLYMERASE MARBURGVIRUS (STRAIN MUSOKE) 144– 698– 1042– 1797– 176 736 1074 1832PRRPL_MABVP RNA-DIRECTED RNA POLYMERASE MARBURG VIRUS (STRAIN POPP) 144–698– 1042– 2223– 176 736 1074 2253 PRRPL_MEASE RNA POLYMERASE BETASUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 193– 647–  788– 1160– 1886– 227683 825 1192 1914 PRRPL_MUMPM RNA POLYMERASE BETA SUBUNIT MUMPS VIRUS(STRAIN MIYAHARA 1882–  VACCINE) 1913 PRRPL_NDVB RNA POLYMERASE BETASUBUNIT NEWCASTLE DISEASE VIRUS (STRAIN 626– 1571–  BEAUDETTE C/45)(NDV) 661 1603 PRRPL_PI2HT RNA POLYMERASE BETA SUBUNIT HUMANPARAINFLUENZA 2 VIRUS (STRAIN 268– 558–  654– 1562– 1881– 2025– TOSHIBA)(PIV-2) 305 595 688 1599 1912 2053 PRRPL_PI3H4 RNA POLYMERASE BETASUBUNIT HUMAN PARAINFLUENZA 3 VIRUS (STRAIN  41– 735–  784– 2111– NIII47885) 76 764 814 2139 PRRPL_RABVP RNA POLYMERASE BETA SUBUNIT RABIESVIRUS (STRAIN PV)  60– 804– 1365– 1930– 90 837 1394 1962 PRRPL_RABVS RNAPOLYMERASE BETA SUBUNIT RABIES VIRUS (STRAIN SAD B19)  60– 804– 1365–1930– 90 837 1394 1962 PRRPL_RDV RNA-DIRECTED RNA POLYMERASE RICE DWARFVIRUS (RDV) 1293–  1323 PRRPL_RYFVZ RNA-DIRECTED RNA POLYMERASE RIFTVALLEY FEVER VIRUS (STRAIN 1018–  2009–  ZH-548 M12) (RVFV) 1055 2044PRRPL_SEND5 RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN Z/HOST 194–233–  735–  784– 2140– MUTANTS) 231 269 764 814 2177 PRRPL_SENDE RNAPOLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN ENDERS)  14–  53–  555–1927– 1960– 51 89 584 1955 1997 PRRPL_SENDZ RNA POLYMERASE BETA SUBUNITSENDAI VIRUS (STRAIN Z) 194– 233–  735–  784– 2140– 231 269 764 814 2177PRRPL_SEOU8 RNA-DIRECTED RNA POLYMERASE SEOUL VIRUS (STRAIN 80-39) 394–1938–  2081– 431 1971 2119 PRRPL_SV5WR RNA POLYMERASE BETA SUBUNITSIMIAN VIRUS 5 (STRAIN 21004-WR) 557– 1094–  2020– (SV5) 594 1122 2051PRRPL_SYNY RNA POLYMERASE BETA SUBUNIT SONCHUS YELLOW NET VIRUS (SYNV)126– 605–  820–  918– 1484– 164 634 856 951 1517 PRRPL_TSWVBRNA-DIRECTED RNA POLYMERASE TOMATO SPOTTED WILT VIRUS  43– 843– 2266–2369– 2481– 2805– (BRAZILIAN ISOLATE CPNH1/BR-01) 79 880 2298 2403 25112840 (TSWV) PRRPL_UUK RNA POLYMERASE UUKUNIEMI VIRUS (UUK) 1017–  1147– 1293– 2000– 1051 1177 1321 2095 PRRPL_VSVJII RNA POLYMERASE BETA SUBUNITVESICULAR STOMATITIS VIRUS 209– 312– 1011– 1662– 1956– 246 349 1039 16971989 PRRPL_VSVJO RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS1011–  1956–  1039 1989 PRRPL_VSVSJ RNA POLYMERASE BETA SUBUNITVESICULAR STOMATITIS VIRUS (STRAIN 138– 209–  312–  961– 1011– 1739–2051– SAN JUAN) 171 246 349 999 1039 1772 2087 PRRPO_BWYVF PUTATIVERNA-DIRECTED RNA POLYMERASE BEET WESTERN YELLOWS VIRUS (ISOLATE 346–FL-1) (BWYV) 374 PRRPO_BYDVI PUTATIVE RNA-DIRECTED RNA POLYMERASE BARLEYYELLOW DWARF VIRUS (ISOLATE 722– MAV-PSI) (BYDV) 755 PRRPO_BYDVPPUTATIVE RNA-DIRECTED RNA POLYMERASE BARLEY YELLOW DWARF VIRUS (ISOLATE722– PAV) (BYDV) 755 PRRPO_BYDVR PUTATIVE RNA-DIRECTED RNA POLYMERASEBARLEY YELLOW DWARF VIRUS (ISOLATE 722– P-PAV) (BYDV) 755 PRRPO_CARMVPROBABLE RNA-DIRECTED RNA POLYMERASE CARNATION MOTTLE VIRUS (CARMV)  4–37 PRRPO_CGMVS PUTATIVE RNA-DIRECTED RNA POLYMERASE CUCUMBER GREENMOTTLE MOSAIC VIRUS 443– 725– 1095– 1565– (WATERMELON STRAIN SH) 481 7551132 1597 PRRPO_CNV PROBABLE RNA-DIRECTED RNA POLYMERASE CUCUMBERNECROSIS VIRUS (CNV) 470– 501 PRRPO_CRM PROBABLE RNA-DIRECTED RNAPOLYMERASE CYMBIDIUM RINGSPOT VIRUS  28– 267–  470– 62 300 501PRRPO_IBDV5 PUTATIVE RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BURSALDISEASE 186– 274– VIRUS (STRAIN 52/70) (IBDV) 218 302 PRRPO_IBDVAPUTATIVE RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BURSAL DISEASE260– 511–  599– VIRUS 288 543 627 PRRPO_IPNVJ PUTATIVE RNA-DIRECTED RNAPOLYMERASE INFECTIOUS PANCREATIC NECROSIS 360– 749– VIRUS (SEROTYPEJASPER) 390 778 PRRPO_IPNVS PUTATIVE RNA-DIRECTED RNA POLYMERASEINFECTIOUS PANCREATIC NECROSIS 360– 749– VIRUS (SEROTYPE SP) (IPNV) 390778 PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 109–263– 2077– (STRAIN ARMSTRONG) 137 291 2106 PRRPO_LYCVW RNA POLYMERASELYMPHOCYTIC CHORIOMENINGITIS VIRUS 109– (STRAIN WE) 137 PRRPO_MCMVPROBABLE RNA DIRECTED RNA POLYMERASE MAIZE CHLOROTIC MOTTLE VIRUS (MCMV) 16–  53– 48 81 PRRPO_PLRVI PUTATIVE RNA DIRECTED RNA POLYMERASE POTATOLEAFROLL VIRUS (STRAIN 1) 576– (PLRV 605 PRRPO_PLRVW PUTATIVE RNADIRECTED RNA POLYMERASE POTATO LEAFROLL VIRUS (STRAIN 576– WAGENINGEN)(PLRV) 607 PRRPO_PPMVS PUTATIVE RNA DIRECTED RNA POLYMERASE PEPPER MILDMOTTLE VIRUS (STRAIN 375– 702–  859– 1069– 1533– SPAIN) (PPMV) 407 730891 1106 1565 PRRPO_RCNMV PUTATIVE RNA DIRECTED RNA POLYMERASE REDCLOVER NECROTIC MOSAIC VIRUS 278– 320– (RCNMV) 314 353 PRRPO_REOVJRNA-DIRECTED RNA POLYMLRASE REOVIRUS (TYPE 2/STRAIN D5/JONES) 284– 315PRRPO_ROTBR RNA-DIRECTED RNA POLYMERASE SUBUNIT VPI BOVINE ROTAVIRUS(STRAIN RF)  25– 200–  247– 60 231 276 PRRPO_ROTBU RNA-DIRECTED RNAPOLYMERASE SUBUNIT VPI BOVINE ROTAVIRUS (STRAIN UK) 200– 247– 231 276PRRPO_ROTPG RNA-DIRECTED RNA POLYMERASE SUBUNIT VPI PORCINE ROTAVIRUS(STRAIN 200– 247– GOTTFRIED) 231 276 PRRPO_ROTSI RNA-DIRECTED RNAPOLYMERASE SUBUNIT VPI SIMIAN II ROTAVIRUS (STRAIN SAII)  25– 200–  247–60 231 276 PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS  17– 109– 2078– 52138 2112 PRRPO_TBSVC PROBABLE RNA-DIRECTED RNA POLYMERASE TOMATO BUSHYSTUNT VIRUS (STRAIN 470– CHERRY) (TBSV) 501 PRRPO_TCV PROBABLERNA-DIRECTED RNA POLYMERASE TURNIP CRINKLE VIRUS (TCV) 280– 318PRRPO_TMGMV PUTATIVE RNA-DIRECTED RNA POLYMERASE TOBACCO MILD GREENMOSAIC VIRUS  67– 128–  209–  376– 450– 855– 1527– (TMV STRAIN U2) 97159 244 406 483 887 1559 PRRPO_TMV PUTATIVE RNA-DIRECTED RNA POLYMERASETOBACCO MOSAIC VIRUS (VULGARE) 128– 376–  700– 1533– (TMV) 159 406 7281565 PRRPO_TMVKR PUTATIVE RNA-DIRECTED RNA POLYMERASE TOBACCO MOSAICVIRUS (STRAIN 128– 376–  700– 1533– KOREAN) (TMV) 159 406 728 1565PRRPO_TMVTO PUTATIVE RNA-DIRECTED RNA POLYMERASE TOBACCO MOSAIC VIRUS(STRAIN 128– 376–  700–  857– 1533– TOMATO/L) (TMV) 159 406 728 889 1565PRRPO_TNVA RNA-DIRECTED RNA POLYMERASE TOBACCO NECROSIS VIRUS (STRAIN A)231– (TNV) 263 PRRPO_TNVD RNA-DIRECTED RNA POLYMERASE TOBACCO NECROSISVIRUS (STRAIN D)  5– 234– (TNV) 40 270 PRRPP_CDVO RNA POLYMERASE ALPHASUBUNIT CANINE DISTEMPER VIRUS (STRAIN 295– ONDERSTEPOORT) (CDV) 332PRRPP_MEASE RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAINEDMONSTON) 295– 332 PRRPP_MEASI RNA POLYMERASE ALPHA SUBUNIT MEASLESVIRUS (STRAIN IP-3-CA) 295– 332 PRRPP_MEASY RNA POLYMERASE ALPHA SUBUNITMEASLES VIRUS (STRAIN YAMAGATA-1) 295– 332 PRRPP_MUMPI RNA POLYMERASEALPHA SUBUNIT MUMPS VIRUS (STRAIN SBL-1) 211– 248 PRRPP_MUMPE RNAPOLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN ENDERS) 212– 249PRRPP_MUMPM RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA212– VACCINE) 249 PRRPP_NDVA RNA POLYMERASE ALPHA SUBUNIT NEWCASTLEDISEASE VIRUS (STRAIN 220– AUSTRALIA-VICTORIA/32) (NDV) 255 PRRPP_NDVBRNA POLYMERASE ALPHA SUBUNIT NEWCASTLE DISEASE VIRUS (STRAIN 220–BEAUDETTE C/45) (NDV) 255 PRRPP_PI2H RNA POLYMERASE ALPHA SUBUNIT HUMANPARAINFLUENZA 2 VIRUS (PIV-2 216– 253 PRRPP_PI2HT RNA POLYMERASE ALPHASUBUNIT HUMAN PARAINFLUENZA 2 VIRUS (STRAIN 216– TOSHIBA) (PIV-2) 253PRRPP_PI4HA RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4A VIRUS220– 332– (STRAIN TOSHIBA) (PIV-4A) 257 364 PRRPP_PI4HB RNA POLYMERASEALPHA SUBUNIT HUMAN PARAINFLUENZA 4B VIRUS 220– 332– (STRAIN 68-333)(PIV-4B) 257 364 PRRPP_PIRYV RNA POLYMERASE ALPHA SUBUNIT PIRY VIRUS134– 168 PRRPP_RABVA RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAINAVOI) 216– 244 PRRPP_RABVC RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS(STRAIN CVS-11) 216– 244 PRRPP_RABVE RNA POLYMERASE ALPHA SUBUNIT RABIESVIRUS (STRAIN ERA), AND 216– RABIES VIRUS (STRAIN PM) 244 PRRPP_RABVPRNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN PV)  89– 216– 122 244PRRPP_RABVS RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN SAD B19)216– 244 PRRPP_SEND5 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAINZ/HOST 530– MUTANTS) 568 PRRPP_SEND6 RNA POLYMERASE ALPHA SUBUNIT SENDAIVIRUS (STRAIN 6/94) 530– 566 PRRPP_SENDF RNA POLYMERASE ALPHA SUBUNITSENDAI VIRUS (STRAIN FUSHIMI) 530– 566 PRRPP_SENDH RNA POLYMERASE ALPHASUBUNIT SENDAI VIRUS (STRAIN HARRIS) 530– 566 PRRPP_SENDZ RNA POLYMERASEALPHA SUBUNIT SENDAI VIRUS (STRAIN Z) 530– 566 PRRPP_SV5 RNA POLYMERASEALPHA SUBUNIT SIMIAN VIRUS 5 (STRAIN W3) (SV5) 198– 236 PRRPP_VSVJM RNAPOLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS 198– (SEROTYPE NEWJERSEY/STRAIN MISSOUR 230 PRRPP_VSVJO RNA POLYMERASE ALPHA SUBUNITVESICULAR STOMATITIS VIRUS 197– (SEROTYPE NEW JERSEY/STRAIN OGDEN) 230PSODC_VACCC SUPEROXIDE DISMUTASE LIKE PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN)  19– 55 PSODC_VACCV SUPEROXIDE DISMUTASE LIKE PROTEINVACCINIA VIRUS (STRAIN WR)  19– 55 PSODC_VARV SUPEROXIDE DISMUTASE LIKEPROTEIN VARIOLA VIRUS  19– 55 PSPHR_AMEPV SPHEROIDIN AMSACTA MOOREIENTOMOPOXVIRUS  58– 138–  627–  671– (AMEPV) 86 172 659 701 PSP11_MYXVLSERPIN 1 MYXOMA VIRUS (STRAIN LAUSANNE) 167– 200 PSP13_VACCC SERINEPROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN COPENHAGEN) 112– 140PSP13_VACCV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN WR)112– 140 PSP13_VARV SERINE PROTEINASE INHIBITOR 3 VARIOLA VIRUS 130– 144PIAGR_FOWPV TRANS-ACTIVATOR PROTEIN I-P0 FOWLPOX VIRUS 199– 230PTALA_BFDV LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS  99– 172– 461– (BFDV) 129 210 491 PTAMI_POVHA MIDDLE T ANTIGEN HAMSTERPOLYOMAVIRUS 106– 138 PTAMI_POVM3 MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS(STRAIN 3)  43– 80 PTAMI_POVMA MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS(STRAIN A2)  43– 80 PTAMI_POVMC MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS(STRAIN CRAWFORD  43– SMALL-PLAQUE) 80 PTASM_POVBA SMALL T ANTIGENPOLYOMAVIRUS BK (STRAIN A5) 130– 162 PTASM_POVBK SMALL T ANTIGENPOLYOMAVIRUS BK 130– 162 PTASM_POVMA SMALL T ANTIGEN HAMSTERPOLYOMAVIRUS 106– 138 PTASM_POVMA SMALL T ANTIGEN MOUSE POLYOMAVIRUS(STRAIN A2)  43– 80 PTASM_SV40 SMALL T ANTIGEN SIMIAN VIRUS 40 (SV40)132– 164 PTEGU_EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAINB95-8) 143– 1469–  1791– 3102– (HUMAN HERPESVIRUS 4) 173 1503 1819 3137PTEGU_HCMVA PROBABLE LARGE TEGUMENT PROTEIN HUMAN CYTOMEGALOVIRUS(STRAIN 161– 699–  812– 2199– AD169) 192 736 840 2228 PTEGU_HSV6G LARGETEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 222– 566–  615–1436– 2037– G5) 259 601 643 1469 2072 PTEGU_HSVEB LARGE TEGUMENT PROTEINEQUINE HERPESVIRUS TYPE 1 (STRAIN 265– 559– 1072– 3363– AB4P) (EHV-1)297 589 1106 3392 PTEGU_HSVSA PROBABLE LARGE TEGUMENT PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 467– 714–  823–  926– 1503– 2421– 505751 861 960 1536 2457 PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUSTYPE 7 369– 400 PTMAF_AVIS4 TRANSFORMING PROTEIN MAF AVIANMUSCULOAPONEUROTIC 230– FIBROSARCOMA VIRUS A542 267 PTOP2_ASFB7 DNATOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (STRAIN 119– 1105–  BAT71V)(ASFV) 153 1142 PTOP2_ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVERVIRUS (ISOLATE 119– 1104–  MALAWI LIL 20/1) (ASFV) 153 1141 PTREL_AVIREREL TRANSFORMING PROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 189– 226PTY5Y_VZVD THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS (STRAIN 121–DUMAS) (VZV) 156 PUIL_HSV6U PROTEIN IL HERPES SIMPLEX VIRUS (TYPE6/STRAIN 171– UGANDA-1102) 203 PLDPE_NPVAC ECDYSTEROIDUDP-GLUCOSYLTRANSFERASE PRECURSO AUTOGRAPHA CALIFORNICA NUCLEAR 185–387–  452– POLYHEDROSIS VIRUS (ACMNPV) 219 425 484 PUL02_HCMVAHYPOTHETICAL PROTEIN UL2 HUMAN CYTOMEGALOVIRUS (STRAIN  25– AD169) 59PUL06_EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 355–(HUMAN HERPESVIRUS 4) 386 PUL06_HSVIT VIRION PROTEIN UL6 HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 404– 17) 436 PUL06_HSVEB VIRION GENE 56 PROTEINEQUINE HERPESVIRUS TYPE 1 (STRAIN 222– 437– AB4P) (EHV-1) 251 475PUL06_HSVSA VIRION GENE 43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 299–330 PUL06_VZVD VIRION GENE 54 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN223– 502– DUMAS) (VZV) 252 530 PUL07_HCMVA HYPOTHETICAL PROTEIN UL7HUMAN CYTOMEGALOVIRUS (STRAIN 186– AD169) 216 PUL07_HSVEB GENE 55PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN  Nov–  AH4P) (EHV-1) 39PUL08_HCMVA HYPOTHETICAL PROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN  65–AD169) 96 PUL08_HSVII PROTEIN UL8 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN614– 17) 648 PUL08_VZVD GENE 52 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN227– DUMAS) (VZV) 255 PUL09_HSVII ORIGIN OF REPLICATION BINDING PROTEINHERPES SIMPLEX VIRUS (TYPE 1/STRAIN 678– 17) 713 PUL09_VZVD ORIGIN OFREPLICATION BINDING PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN 168– DUMAS)(VZV) 204 PUL14_TRVN3 UL14 PROTEIN HOMOLOG PSEUDORABIES VIRUS (STRAINNIA-3)  40– (PRV) 76 PUL16_HSVII PROTEIN UL16 HERPES SIMPLEX VIRUS (TYPE1/STRAIN  22– 17) 52 PUL17_HSV6U PROTEIN 10R HERPES SIMPLEX VIRUS (TYPE6/STRAIN 302– UGANDA-1102) 339 PUL21_HSVEB GENE 40 PROTEIN EQUINEHERPESVIRUS TYPE I (STRAIN 294– AB4P) (EHV-I) 328 PUL21_PRVN3 PROTEINUL21 HOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3) 242– (PRV) 271 PUL21_VZVDGENE 38 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN  56– 375– DUMAS) (VZV) 92412 PUL21_HCMVA HYPOTHETICAL PROTEIN HL24 HUMAN CYTOMEGALOVIRUS (STRAIN 52– AD169) 87 PUL24_ILTVT PROTEIN UL24 HOMOLOG INFECTIOUSLARYNGOTRACHEITIS VIRUS 158– (STRAIN THORNE V882) 196 PUL25_HSVEB VIRIONPROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 (STRAIN 343– AB4P) (EHV-1) 379PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 290–323 PUL25_VZVD VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN540– DUMAS) (VZV) 571 PUL28_HCMVA HYPOTHETICAL PROTEIN UL28 HUMANCYTOMEGALOVIRUS (STRAIN 287– AD169) 316 PUL31_HCMVA HYPOTHETICAL PROTEINUL38 HUMAN CYTOMEGALOVIRUS (STRAIN 464– AD169) 501 PUL31_HSVBA GENE 69PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 163– 197 PUL32_EBV PROBABLEMAJOR ENVELOPE GLYCOPROTEIN BFLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 367–(HUMAN HERPESVIRUS 4) 405 PUL32_HSVII PROBABLE MAJOR ENVELOPEGLYCOPROTEIN UL32 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 404– 564– 17) 438592 PUL32_HSVEB MAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUS TYPE1  81– 115 PUL32_HSVSA PROBABLE MAJOR ENVELOPE GLYCOPROTEIN 68HERPESVIRUS SAIMIRI (STRAIN 11) 276– 307 PUL32_VZVD PROBABLE MAJORENVELOPE GLYCOPROTEIN 26 VARICELLA-ZOSTER VIRUS (STRAIN 553– DUMAS)(VZV) 581 PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 98– 130 PUL35_HCMVA HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS(STRAIN 138– AD169) 169 PUL36_HCMVA HYPOTHETICAL PROTEIN UL36 HUMANCYTOMEGALOVIRUS (STRAIN 186– AD169) 223 PUL37_EBV PROTEIN BOLF1EPSTEIN-BARR VIRUS (STRAIN B95-8)  85– (HUMAN HERPESVIRUS 4) 123PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 702– 778–AB4P) (EHV-1) 732 812 PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11) 566– 602 PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS(STRAIN 598– 706–  776– DUMAS) (VZV) 629 736 806 PUL38_HCMVAHYPOTHETICAL PROTEIN UL38 HUMAN CYTOMEGALOVIRUS (STRAIN 157– AD169) 188PUL41_VZVD HOST SHUTOFF VIRION PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN274– DUMAS) (VZV) 307 PUL43_HSVII MEMBRANE PROTEIN UL43 HERPES SIMPLEXVIRUS (TYPE 1/STRAIN  41– 17) 70 PUL45_HSVII GENE 15 MEMBRANE PROTEINVARICELLA-ZOSTER VIRUS (STRAIN  34– 277– DUMAS) (VZV) 64 308 PUL47_HCMVAPROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN 438– 741– AD169) 471 777PUL47_HSVE4 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 4580– 615 PUL47_HSVEB 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINEHERPESVIRUS TYPE 1 (STRAIN 587– AB4P) (EHV-1) 622 PUL49_HSVII TEGUMENTPROTEIN UL49 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 226– 17 259 PUL49_HSVBPTEGUMENT PROTEIN UL49 HOMOLOG BOVINE HERPESVIRUS TYPE 1 (STRAIN 135–P8-2) 168 PUL52_EBV PROBABLE DNA REPLICATION PROTEIN BSLF1 EPSTEIN-BARRVIRUS (STRAIN B95-8) 582– (HUMAN HERPESVIRUS 4) 617 PUL52_HSVII DNAREPLICATION PROTEIN UL52 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 599– 791–17) 629 805 PUL52_HSVEB DNA REPLICATION PROTEIN UL52 EQUINE HERPESVIRUSTYPE 1 (STRAIN 316– 580–  912– AB4P) (EHV-1) 344 618 947 PUL52_HSVSAPROBABLE DNA REPLICATION GENE 56 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)229– 374– 267 411 PUL53_HCMVA PROTEIN UL53 HUMAN CYTOMEGALOVIRUS (STRAIN213– AD169) 248 PUL54_HSV6V UL53 PROTEIN HOMOLOG HERPES SIMPLEX VIRUS(TYPE 6/STRAIN 105– UGANDA-1102) 139 PUL60_HCMVA HYPOTHETICAL PROTEINUL60 HUMAN CYTOMEGALOVIRUS (STRAIN 120– AD169 148 PUL70_HCMVA PROBABLEDNA REPLICATION PROTEIN UL70 HUMAN CYTOMEGALOVIRUS (STRAIN  36– 626–AD169) 65 664 PUL77_HCMVA VIRION PROTEIN UL77 HUMAN CYTOMEGALOVIRUS(STRAIN 381– 565– AD169) 413 598 PUL78_HCMVA HYPOTHETICAL PROTEIN UL78HUMAN CYTOMEGALOVIRUS (STRAIN 262– 303– AD169) 290 341 PUL79_HSVSAHYPOTHETICAL GENE 18 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 158– 195PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN130– UGANDA-1102) 159 PUL87_HSVSA HYPOTHETICAL GENE 24 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 322– 355 PUL88_HCMVA HYPOTHETICALPROTEIN UL88 HUMAN CYTOMEGALOVIRUS (STRAIN 309– AD169) 337 PUL88_HSV6UHYPOTHETICAL PROTEIN 6R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 150– 238–UGANDA-1102) 187 273 PUL91_HSVSA HYPOTHETICAL GENE 30 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11)  23– 53 PUL92_EBV HYPOTHETICAL PROTEINBDLF4 EPSTEIN-BARR VIRUS (STRAIN B95-8) 106– (HUMAN HERPESVIRUS 4) 144PUL92_HSVSA HYPOTHETICAL GENE 31 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)123– 157 PUL93_HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN 387–AD169) 420 PUL95_EBV HYPOTHETICAL PROTEIN BGLF3 EPSTEIN-BARR VIRUS(STRAIN B95-8) 111– (HUMAN HERPESVIRUS 4) 145 PULB8_HCMVA HYPOTHETICALPROTEIN UL118 HUMAN CYTOMEGALOVIRUS (STRAIN 102– 152– AD169 130 181PULC1_HCMVA HYPOTHETICAL PROTEIN UL121 HUMAN CYTOMEGALOVIRUS (STRAIN129– AD169) 165 PULC8_HCMVA HYPOTHETICAL PROTEIN UL128 HUMANCYTOMEGALOVIRUS (STRAIN  64– AD169) 96 PULC9_HCMVA HYPOTHETICAL PROTEINUL129 HUMAN CYTOMEGALOVIRUS (STRAIN  66– AD169) 99 PULD0_HCMVAHYPOTHETICAL PROTEIN UL130 HUMAN CYTOMEGALOVIRUS (STRAIN  81– AD169) 114PUNG_EBV URACIL-DNA GLYCOSYLASE EPSTEIN-BARR VIRUS (STRAIN B95-8) 159–(HUMAN HERPESVIRUS 4) 189 PUNG_VACCC URACIL-DNA GLYCOSYLASE VACCINIAVIRUS (STRAIN COPENHAGEN)  82– 117 PUNG_VACCV URACIL-DNA GLYCOSYLASEVACCINIA VIRUS (STRAIN WR)  82– 117 PUNG_VAKV URACIL-DNA GLYCOSYLASEVARIOLA VIRUS  82– 117 PUS02_HCMVA HYPOTHETICAL PROTEIN HOLF2 HUMANCYTOMEGALOVIRUS (STRAIN  43– AD169) 73 PUS07_HCMVA HYPOTHETICAL PROTEINHXLF5 HUMAN CYTOMEGALOVIRUS (STRAIN 153– AD169) 190 PUS09_HCMVAHYPOTHETICAL PROTEIN HXLF3 HUMAN CYTOMEGALOVIRUS (STRAIN 179– AD169) 213PUS10_HCMVA HYPOTHETICAL PROTEIN HXLF2 HUMAN CYTOMEGALOVIRUS (STRAIN137– AD169) 170 PUS12_HCMVA HYPOTHETICAL PROTEIN HVLF6 HUMANCYTOMEGALOVIRUS (STRAIN  29– 113– AD169) 67 142 PUS13_HCMVA HYPOTHETICALPROTEIN HVLF5 HUMAN CYTOMEGALOVIRUS (STRAIN  11– AD169) 45 PUS15_HCMVAHYPOTHETICAL PROTEIN HVLF3 HUMAN CYTOMEGALOVIRUS (STRAIN 343– AD169 375PUS16_HCMVA HYPOTHETICAL PROTEIN HVLF2 HUMAN CYTOMEGALOVIRUS (STRAIN151– 243– AD169) 188 274 PUS18_HCMVA MEMBRANE PROTEIN HWLF5 HUMANCYTOMEGALOVIRUS (STRAIN 185– AD169) 222 PUS22_HCMVA EARLY NUCLEARPROTEIN HWLF1 HUMAN CYTOMEGALOVIRUS (STRAIN 270– AD169) 299 PUS26_HCMVAHYPOTHETICAL PROTEIN HIILF5 HUMAN CYTOMEGALOVIRUS (STRAIN 132– AD169 164PUS27_HCMVA G-PROTEIN COUPLED RECEPTOR HOMOLOG US27 HUMANCYTOMEGALOVIRUS (STRAIN 247– AD169 285 PUS29_HCMVA HYPOTHETICAL PROTEINHHRF4 HUMAN CYTOMEGALOVIRUS (STRAIN 246– AD169) 276 PUS30_HCMVAHYPOTHETICAL PROTEIN HHRF5 HUMAN CYTOMEGALOVIRUS (STRAIN 208– AD169) 246PV125_AMVLE 125 KD PROTEIN ALFALFA MOSAIC VIRUS (STRAIN 263– 425/ISOLATELEIDEN 292 PV13K_TRVPL 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PLB) 24– 62 PV143_NPVAC HELICASE AUTOGRAPHA CALIFORNICA NUCLEAR 312–POLYHEDROSIS VIRUS 342 PV17K_BSMV 17 KD PROTEIN BARLEY STRIPE MOSAICVIRUS (BSMV)  40– 75 PV1A_CMVFN 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAINFNY) 674– (CMV) 709 PV270_ASFB7 L270 PROTEIN AFRICAN SWINE FEVER VIRUS(STRAIN 103– BA7IV) (ASFV) 135 PV2A_BBMV 2A PROTEIN BROAD BEAN MOTTLEVIRUS 636– 673 PV2A_CCMV 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 325–639–  762– (CCMV) 363 673 799 PV2A_CMVFN 2A PROTEIN CUCUMBER MOSAICVIRUS (STRAIN FNY) 208– 292– (CMV) 243 320 PV2A_CMVQ 2A PROTEIN CUCUMBERMOSAIC VIRUS (STRAIN Q) 205– (CMV) 240 PV2A_TAV 2A PROTEIN TOMATOASPERMY VIRUS (TAV) 297– 325 PV30K_TRVTC 29.1 KD PROTEIN TOBACCO RATTLEVIRUS (STRAIN TCM) 102– 133 PV3A_BBMV 3A PROTEIN BROAD BEAN MOTTLE VIRUS155– 187 PV3A_BMV 3A PROTEIN BROME MOSAIC VIRUS (BMV) 159– 189 PV3A_CCMV3A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 160– (CCMV) 188 PV3A_IBVB 3APROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  5– (STRAIN BEAUDETTE) (IBV)43 PV3A_IBVM 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  5– (STRAINM41) (IBV) 42 PV3A_IBVP3 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 5– 42 PV3A_IBVU5 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  5–(STRAIN UK/183/66) (IBV) 42 PV51K_ACLSV 50 8 KD PROTEIN APPLE CHLOROTICLEAF SPOT VIRUS  70– (ACLSV) 106 PV51K_BWYVF 51 KD PROTEIN BEET WESTERNYELLOWS VIRUS (ISOLATE 366– FL-1) (BWYV) 398 PV51K_BWYVG 51 KD PROTEINBEET WESTERN YELLOWS VIRUS (ISOLATE 366– GBI) (BWYV) 398 PV56K_PLRVI 56KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 360– (PLRV) 392 PV56K_PLRVW56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 360– WAGENINGEN) (PLRV) 392PV58K_BSMV 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 320– 353PV70K_PLRVI 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 220– (PLRV)257 PV70K_PLRVW 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 220–WAGENINGEN) (PLRV) 257 PV90K_AMVLE 90 KD PROTEIN ALFALFA MOSAIC VIRUS(STRAIN 425/ 103– ISOLATE LEIDEN) 131 PVA04_VACCC PROTEIN A4 VACCINIAVIRUS (STRAIN COPENHAGEN) 217– 251 PVA04_VACCV PROTEIN A4 VACCINIA VIRUS(STRAIN WR) 217– 251 PVA04_VARV PROTEIN A4 VARIOLA VIRUS 207– 241PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN)  95– 132PVA11_VARV PROTEIN A11 VARIOLA VIRUS  96– 133 PVA18_VACCC 56 KD ABORTIVELATE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 390– 421 PVA18_VACCV 56KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN WR) 390– 421 PVA18_VARV56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS 390– 421 PVA23_VACCC PROTEINA23 VACCINIA VIRUS (STRAIN COPENHAGEN)  81– 170– 111 203 PVA23_VARVPROTEIN A23 VARIOLA VIRUS  81– 170– 111 203 PVA31_VACCC PROTEIN A31VACCINIA VIRUS (STRAIN COPENHAGEN)  42– 76 PVA31_VACCV PROTEIN A31VACCINIA VIRUS (STRAIN WR)  42– 76 PVA31_VARV PROTEIN A31 VARIOLA VIRUS 42– 76 PVA32_VACCV PROTEIN A32 VACCINIA VIRUS (STRAIN WR), AND  48–VACCINIA VIRUS (STRAIN COPENHAG 79 PVA32_VARV PROTEIN A32 VARIOLA VIRUS 18– 49 PVA40_VACCC PROTEIN A40 VACCINIA VIRUS (STRAIN COPENHAGEN)  4–37 PVA43_VACCC PROTEIN A43 VACCINIA VIRUS (STRAIN COPENHAGEN)  94– 129PVA43_VACCV PROTEIN A43 VACCINIA VIRUS (STRAIN WR)  94– 129 PVA43_VARVPROTEIN A43 VARIOLA VIRUS  95– 130 PVA51_VACCC PROTEIN A51 VACCINIAVIRUS (STRAIN COPENHAGEN) 109– 143 PVA51_VACCV PROTEIN A51 VACCINIAVIRUS (STRAIN WR) 109– 143 PVAL1_BCIV ALI PROTEIN BEET CURLY TOP VIRUS(BCTV)  89– 118 PVAL1_BGMV ALI PROTEIN BEAN GOLDEN MOSAIC VIRUS  89– 118PVAL1_CLVK ALI PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST  88– KENYAN 844117 PVAL1_CLVN ALI PROTEIN CASSAVA LATENT VIRUS (STRAIN  88– NIGERIAN)117 PVAL1_PYMVV ALI PROTEIN POTATO YELLOW MOSAIC VIRUS (ISOLATE  89–VENEZUELA) 118 PVAL1_TGMV ALI PROTEIN TOMATO GOLDEN MOSAIC VIRUS (TGMV) 90– 119 PVAL1_TYLCM ALI PROTEIN TOMATO YELLOW LEAF CURL VIRUS  89–(STRAIN MARMANDE) (TYLCV) 118 PVAL1_TYLCV ALI PROTEIN TOMATO YELLOW LEAFCURL VIRUS  87– (TYLCV) 116 PVAL3_BCTV AL3 PROTEIN BEET CURLY TOP VIRUS(BCTV)  82– 115 PVAL3_CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST 77– KENYAN 844) 113 PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN 77– NIGERIAN) 113 PVAL3_TYLCM AL3 PROTEIN TOMATO YELLOW LEAF CURL VIRUS 78– (STRAIN MARMANDE) (TYLCV) 116 PVAL3_TYLCV AL3 PROTEIN TOMATO YELLOWLEAF CURL VIRUS  77– (TYLCV 113 PVAT_CAMVC APHID TRANSMISSION PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN  20–  81– CM-1841) (CAMV) 53 116PVAT_CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 20– 102– D/H) (CAMV 53 130 PVAT_CAMVE APHID TRANSMISSION PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN  20–  81– BBC) (CAMV) 53 116 PVAT_CAMVNAPHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN  20–  81–NYU 153) (CAMV) 53 116 PVAT_CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN  20–  81– PV147) (CAMV) 53 116 PVAT_CAMVS APHIDTRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN  20–  81–STRASBOURG) (CAMV) 53 116 PVB04_VACCC PROTEIN B4 VACCINIA VIRUS (STRAINCOPENHAGEN) 124– 489– 156 525 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS(STRAIN WR) 124– 489– 156 525 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 489–525 PVB16_COWPX INTERLEUKIN-I BINDING PROTEIN PRECURSOR COWPOX VIRUS(CPV)  89– 126 PVB16_VACCV INTERLEUKIN-I BINDING PROTEIN PRECURSORVACCINIA VIRUS (STRAIN WR)  89– 126 PVB19_VACCC SURFACE ANTIGEN SPRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 213– 244 PVB19_VACCDSURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN DAIREN 1) 211– 242PVD19_VACCV SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN WR) 211–242 PVB19_VARV SURFACE ANTIGEN S PRECURSOR VARIOLA VIRUS 211– 242PVBRI_BGMV BRI PROTEIN BEAN GOLDEN MOSAIC VIRUS 166– 198 PVC03_SFVXAG-PROTEIN COUPLED RECEPTOR HOMOLOG C3 SHOPE FIBROMA VIRUS (STRAIN KASZA) 98– (SF-V) 130 PVC04_VACCC PROTEIN C4 VACCINIA VIRUS (STRAINCOPENHAGEN) 109– 182– 139 216 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS(STRAIN WR) 109– 183– 139 215 PVC04_VARV PROTEIN C4 VARIOLA VIRUS 109–139 PVC06_VACCC PROTEIN C6 VACCINIA VIRUS (STRAIN COPENHAGEN)  36– 67PVC06_VACCV PROTEIN C6 VACCINIA VIRUS (STRAIN WR)  36– 67 PVC06_VARVPROTEIN C6 VARIOLA VIRUS  36– 67 PVC07_SFVKA HYPOTHETICAL PROTEIN C7SHOPE FIBROMA VIRUS (STRAIN KASZA)  60– (SFV) 97 PVC09_VACCC PROTEIN C9VACCINIA VIRUS (STRAIN COPENHAGEN) 573– 610 PVC09_VACCV PROTEIN C9VACCINIA VIRUS (STRAIN WR) 573– 610 PVC10_SFVKA HYPOTHETICAL PROTEIN C10SHOPE FIBROMA VIRUS (STRAIN KASZA)  85– (SFV) 121 PVC10_VACCC PROTEINC10 VACCINIA VIRUS (STRAIN COPENHAGEN) 121– 158 PVC10_VACCV PROTEIN C10VACCINIA VIRUS (STRAIN WR) 121– 158 PVC10_VARV PROTEIN C10 VARIOLA VIRUS121– 158 PVC21_VACCC PROTEIN C21/B27 VACCINIA VIRUS (STRAIN COPENHAGEN) 3– 34 PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)148– 200– (HUMAN HERPES VIRUS 4) 183 230 PVCAP_HCMVA MAJOR CAPSIDPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN  43– 128–  258– AD169) 78 161 286PVCAP_HSVII MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 19– 17) 49 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE6/STRAIN 124– 666–  841– UGANDA-1102) 161 696 869 PVCAP_HSVEB MAJORCAPSID PROTEIN EQUINE HERPESVIRUS TYPE I (STRAIN  17– 198–  272– AD-IP)(EHV-1) 54 232 301 PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11) 144– 196–  734– 1062– 179 226 769 1096 PVCAP_PRVIS MAJORCAPSID PROTEIN PSEUDORABIES VIRUS (STRAIN INDIANA 189– 260– S) (PRV) 221289 PVCAP_VZVD MAJOR CAPSID PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN  31–DUMAS) (VZV) 68 PVCOM_ADE02 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 2 86– 115 PVCOM_ADE05 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 5  85– 114PVD03_VACCC PROTEIN D3 VACCINIA VIRUS (STRAIN COPENHAGEN)  12– 146– 50182 PVD03_VACCV PROTEIN D3 VACCINIA VIRUS (STRAIN WR)  12– 146– 50 182PVD03_VARV PROTEIN D3 VARIOLA VIRUS  12– 146– 50 182 PVD05_FOWPI 92 6 KDPROTEIN FOWLPOX VIRUS (STRAIN FP-I) 315– 352 PVD05__VACCC PROTEIN D5VACCINIA VIRUS (STRAIN COPENHAGEN) 320– 348 PVD05__VACCV PROTEIN D5VACCINIA VIRUS (STRAIN WR) 320– 348 PVD05__VARV PROTEIN D5 VARIOLA VIRUS320– 348 PVD10_FOWPI PROTEIN D10 FOWLPOX VIRUS (STRAIN FP-I) 114– 143PVE05_VACCD PROTEIN E5 VACCINIA VIRUS (STRAIN DAIREN 1)  31– 60PVE06_VACCC PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 226– 430– 511– 260 458 540 PVE06_VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 226–430–  511– 260 458 540 PVE06_VARV PROTEIN E6 VARIOLA VIRUS 430– 511– 458540 PVE10_VARV PROTEIN E10 VACCINIA VIRUS (STRAIN COPENHAGEN)  3– 41PVE10_VACCV PROTEIN E10 VACCINIA VIRUS (STRAIN WR)  3– 41 PVE10_VARVPROTEIN E10 VARIOLA VIRUS  3– 41 PVE12_HPVI6 PROBABLE E1 PROTEIN 2 HUMANPAPILLOMAVIRUS TYPE 16 102– 131 PVE18_NPVAC EARLY 18 5 KD PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR  45– POLYHEDROSIS VIRUS (ACMNPV) 77PVE1_HPV05 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5  4– 35 PVE1_HPV11 E1PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 258– 291 PVE1_HPV13 E1 PROTEINHUMAN PAPILLOMAVIRUS TYPE 13 255– 288 PVE1_HPV33 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 33 238– 519– 267 547 PVE1_HPV35 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 230– 263 PVE1_HPV39 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39 242– 271 PVEI_HPV41 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41 105–  93– 138 231 PVE1_HPV58 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 58 238– 267 PVE1_HPV5B E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B  6– 35 PVE1_MPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 6B 258– 291 PVE1_PAPVD E1 PROTEIN DEER PAPILLOMAVIRUS 163– 201PVE1_PCPVI E1 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS 257– TYPE 1 290PVE26_NPVAC EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 118–POLYHEDROSIS VIRUS (ACMNPV) 150 PVE2_HPV57 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 57 151– 182 PVE2_RHPVI E2 PROTEIN RHESUSPAPILLOMAVIRUS TYPE 1 (RHPV 117– 1) 147 PVE41_NPVAC EARLY 40.9 KDPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  14– POLYHEDROSIS VIRUS (ACMNPV)52 PVE5A_HPVII PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11  19– 56PVE5A_HPV6H PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B  19– 56PVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6C  19– 56PVE5_HPV13 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13  19– 56PVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  89– 118PVE5_HPV6C PROBABLE E5 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS  21– TYPE1 58 PVE5_RHPVI PROBABLE E5 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 (RHPV109– 1) 140 PVE6_HPVIA E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A  91– 128PVE7_HPV05 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5  55– 90 PVE7_HPV08 E7PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8  55– 90 PVE7_HPV11 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 11  47– 83 PVE7_HPV16 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 16  47– 81 PVE7_HPV1A E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A  45– 77 PVE7_HPV31 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 31  47– 83 PVE7_HPV33 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 33  47– 83 PVE7_HPV35 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35  48– 84 PVE7_HPV41 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41  63– 94 PVE7_HPV47 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 47  55– 90 PVE7_HPV51 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51  61– 94 PVE7_HPV58 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 58  48– 84 PVE7_HPV5B E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B  55– 90 PVE7_HPV6B E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 6B  47– 83 PVE7_PAPVD E7 PROTEIN DEER PAPILLOMAVIRUS 48– 86 PVE7_PAPVE E7 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS (EEPV)  60– 93PVE94_NPVAC EARLY 91 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 123– 650–POLYHEDROSIS VIRUS (ACMNPV) 157 678 PVEP_GVTN VIRAL ENHANCING FACTORTRICHOPLUSIA NI GRANULOSIS VIRUS 154– (TNGV) 182 PVENV_BEV ENVELOPEPROTEIN BERNE VIRUS (BEV)  16–  87– 4 51 117 PVENV_DHIII ENVELOPEGLYCOPROTEIN PRECURSOR DHORI VIRUS (STRAIN INDIAN/1313/61) 297– (DHO)335 PVENV_MCV1 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUSSUBTYPE 203– 1 (MCVI) 236 PVENV_MCV2 MAJOR ENVELOPE PROTEIN MOLLUSCUMCONTAGIOSUM VIRUS SUBTYPE 203– 2 (MCVII) 236 PVENV_VACCC MAJOR ENVELOPEPROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 208– 241 PVENV_VACCI MAJORENVELOPE PROTEIN VACCINIA VIRUS (STRAIN IHD-J) 208– 24I PVENV_VACCPMAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN L-IVP) 208– 241PVENV_VACCV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN WR) 208– 241PVENV_VARV MAJOR ENVELOPE PROTEIN VARIOLA VIRUS 155– 208– 187 241PVF03_VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN)  2–  61– 40 93PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN WR)  2–  61– 40 93PVFP1_FOWPV PROTEIN FP1 FOWLPOX VIRUS 297– 330 PVFP4_FOWPV PROTEIN FP4FOWLPOX VIRUS 237– 267 PVFP7_CATVK PROTEIN F7 CAPRIPOXVIRUS (STRAINKS-I)  89– 118 PVFUS_VACCC 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN)  28– 61 PVFUS_VACCV 14 KD FUSION PROTEIN VACCINIA VIRUS(STRAIN WR)  28– 61 PVFUS_VARV 14 KD FUSION PROTEIN VARIOLA VIRUS  28–61 PVG01_HSVII HYPOTHETICAL GENE 1 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 317– CATFISH VIRUS) (CCV) 346 PVG02_HSVEB HYPOTHETICAL GENE 2PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 163– AB4P) (EHV-I) 196PVG02_VACCV ISATIN-BETA-THIOSEMICARBAZONE DEPENDENT PROTEI VACCINIAVIRUS (STRAIN WR), AND  92– VACCINIA VIRUS (STRAIN COPENHAGE 120PVG02_VARV ISATIN-BETA-THIOSEMICARBAZONE DEPENDENT PROTEI VARIOLA VIRUS 92– 120 PVG03_HSVII HYPOTHETICAL GENE 3 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 108– CATFISH VIRUS) (CCV) 136 PVG06_HSVII HYPOTHETICAL GENE 6MEMBRANE PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  54– CATFISH VIRUS)(CCV) 83 PVG06_VACCC PROTEIN G6 VACCINIA VIRUS (STRAIN COPENHAGEN)  99–136 PVG06_VARV PROTEIN G6 VARIOLA VIRUS  99– 136 PVG07_VACCC PROTEIN G7VACCINIA VIRUS (STRAIN COPENHAGEN) 113– 145 PVG07_VARV PROTEIN G7VARIOLA VIRUS 113– 145 PVG09_VACCC PROTEIN F1 VACCINIA VIRUS (STRAINCOPENHAGEN) 303– 338 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN WR)266– 301 PVG09_VARV PROTEIN F1 VARIOLA VIRUS 303– 338 PVG11_MSVIIHYPOTHETICAL GENE 11 ZINC-BINDING PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 150– CATFISH VIRUS) (CCV) 183 PVG12_HSVII HYPOTHETICAL GENE 12ZINC-BINDING PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 206– CATFISHVIRUS) (CCV) 243 PVG12_HSVSA HYPOTHETICAL GENE 12 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11)  68– 106 PVG1_SPVIR CAPSID PROTEIN SPIROPLASMA VIRUSSPVI-R8A2 B 254– 303–  414– 292 337 452 PVG22_HSVII HYPOTHETICAL GENE 22PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 300– 647– CATFISH VIRUS) (CCV)337 678 PVG23_HSVII HYPOTHETICAL GENE 23 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL  70– CATFISH VIRUS) (CCV) 108 PVG26_HSVII HYPOTHETICAL GENE 26PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  94– CATFISH VIRUS) (CCV) 125PVG27_HSVSA HYPOTHETICAL GENE 27 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 36– 74 PVG28_HSVII HYPOTHETICAL GENE 28 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 491– CATFISH VIRUS) (CCV) 521 PVG2R_AMEPV HYPOTHETICAL G2RPROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 180– (AMEPV) 217 PVG2_SPV4 GENE 2PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 209– 244 PVG35_HSVII HYPOTHETICALGENE 35 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  15– 190– CATFISHVIRUS) (CCV) 46 226 PVG36_HSVSA POSSIBLE TYROSINE-PROTEIN KINASEHERPESVIRUS SAIMIRI (STRAIN 11) 151– 185 PVG39_HSVII HYPOTHETICAL GENE39 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 543– 648– CATFISH VIRUS)(CCV) 577 682 PVG40_HSVSA HYPOTHETICAL GENE 40 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11) 187– 216 PVG41_HSVII HYPOTHETICAL GENE 41 PROTEINICTALURID HERPESVIRUS 1 (CHANNEL  11– 202– CATFISH VIRUS) (CCV) 45 233PVG42_HSVII HYPOTHETICAL GENE 42 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL  91– CATFISH VIRUS) (CCV) 125 PVG43_HSVII HYPOTHETICAL GENE 43PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 109– 157– CATFISH VIRUS) (CCV)140 185 PVG46_HSVII PROBABLE MAJOR GLYCOPROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 888– CATFISH VIRUS) (CCV) 925 PVG48_HSVSA HYPOTHETICAL GENE 48PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 329– 357 PVG50_HSVSA PROBABLETRANSCRIPTION ACTIVATOR EDRF1 HERPESVIRUS SAIMIRI (STRAIN 11) 113– 141PVG51_HSVII HYPOTHETICAL GENE 51 MEMBRANE PROTEIN ICTALURID HERPESVIRUS1 (CHANNEL  29–  84– CATFISH VIRUS) (CCV) 64 120 PVG52_HSVIIHYPOTHETICAL GENE 52 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  96–CATFISH VIRUS) (CCV) 134 PVG55_HSVII HYPOTHETICAL GENE 55 PROTEINICTALURID HERPESVIRUS 1 (CHANNEL 100– CATFISH VIRUS) (CCV) 129PVG56_HSVII HYPOTHETICAL GENE 56 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 364– 631– 1091– CATFISH VIRUS) (CCV) 396 667 1126 PVG58_HSVIIHYPOTHETICAL GENE 58 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 342– 480–CATFISH VIRUS) (CCV) 375 508 PVG58_HSVSA GENE 58 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11)  25– 195– 60 233 PVG59_HSVII HYPOTHETICAL GENE 59MEMBRANE PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  82– CATFISH VIRUS)(CCV) 118 PVG61_HSVII HYPOTHETICAL GENE 61 PROTEIN ICTALURID HERPESVIRUS1 (CHANNEL  76– CATFISH VIRUS) (CCV) 109 PVG64_HSVII HYPOTHETICAL GENE64 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  55– 363–  420– CATFISHVIRUS) (CCV) 89 401 452 PVG65_HSVII HYPOTHETICAL GENE 65 PROTEINICTALURID HERPESVIRUS 1 (CHANNEL 801– 1146–  1290– CATFISH VIRUS) (CCV)836 1174 1326 PVG67_HSWI HYPOTHETICAL GENE 67 PROTEIN ICTALURIDHERPESVIRUS 1 (CHANNEL 1150–  CATFISH VIRUS) (CCV) 1185 PVG6_SPVIR GENE6 PROTEIN SPIROPLASMA VIRUS SPVI-R8A2 B  60– 89 PVG71_HSVSA HYPOTHETICALGENE 71 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 128– 158 PVG72_HSVIIHYPOTHETICAL GENE 72 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 445– 720–1158– 1252– CATFISH VIRUS) (CCV) 478 751 1189 1285 PVG75_HSVIIHYPOTHETICAL GENE 75 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 263– 387–CATFISH VIRUS) (CCV) 291 422 PVG76_HSVII HYPOTHETICAL GENE 76 PROTEINICTALURID HERPESVIRUS 1 (CHANNEL 187– CATFISH VIRUS) (CCV) 221PVG7_SPVIR GENE 7 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B  18– 46PVGF1_IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 1719–  1856– 2108– 3601– (STRAIN BEAUDETTE) (IBV) 1747 1891 2146 3633 PVGH3_HCMVAGLYCOPROTEIN H301 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN  80– 157– AD169) 115 185 PVGL2_CVBF E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS(STRAIN F15) 1259–  1294 PVGL2_CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINECORONAVIRUS (STRAIN L9) 651– 681 PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSORBOVINE CORONAVIRUS (STRAIN LY-138) 1259–  1294 PVGL2_CVBM E2GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 1259–  1294PVGL2_CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC)1259–  1294 PVGL2_CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS(STRAIN VACCINE) 1259–  1294 PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSOR HUMANCORONAVIRUS (STRAIN 229E) 1053–  1088 PVGL2_CVM4 E2 GLYCOPROTEINPRECURSOR MURINE CORONAVIRUS MHV (STRAIN 1267–  WILD TYPE 4) (MHV-4)1304 PVGL2_CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV(STRAIN A59 1215–  1252 PVGL2_CVMJC E2 GLYCOPROTEIN PRECURSOR MURINECORONAVIRUS MHV (STRAIN 1267–  JHMV/VARIANT CL-2) 1304 PVGL2_CVMJH E2GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN JHM) 1126–  1163PVGL2_CVPFS E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 632– 736–1328– GASTROENTERITIS CORONAVIRUS 665 764 1363 PVGL2_CVPMI E2GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 632– 736– 1328–GASTROENTERITIS CORONAVIRUS 665 764 1363 PVGL2_CVPPR E2 GLYCOPROTEINPRECURSOR PORCINE TRANSMISSIBLE 630– 734– 1326– GASTROENTERITISCORONAVIRUS 663 762 1361 PVGL2_CVPPU E2 GLYCOPROTEIN PRECURSOR PORCINETRANSMISSIBLE 630– 734– 1326– GASTROENTERITIS CORONAVIRUS 663 762 1361PVGL2_CVPRS E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS512– 1104–  540 1139 PVGL2_CVTRM E2 GLYCOPROTEIN PRECURSOR PORCINERESPIRATORY CORONAVIRUS 408– 512– 1104– (STRAIN RM4) (PRCV) 441 540 1139PVGL2_CVTRT E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 630– 734–1326– GASTROENTERITIS CORONAVIRUS 663 762 1361 (STRAIN NEB7 PVGL2_FIPVE2 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 635– 739–1331– (STRAIN 79-1146) (FIPV) 668 767 1366 PVGL2_IBVB E2 GLYCOPROTEINPRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 153– (STRAIN BEAUDETTE)(IBV) 188 PVGLB_HCMVA GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS(STRAIN 116– 706– AD169) 147 743 PVGLB_HCMVT GLYCOPROTEIN B PRECURSORHUMAN CYTOMEGALOVIRUS (STRAIN 116– 707– TOWNE) 147 744 PVGLB_HSV6UGLYCOPROTEIN B HERPES SIMPLEX VIRUS (TYPE 6/  72– STRAIN UGANDA-1102)110 PVGLB_HSVB1 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 254–288 PVGLB_HSVB2 GLYCOPROTEIN B-1 PRECURSOR BOVINE HERPESVIRUS TYPE 2(STRAIN 745– BMV) (BOVINE MAMMILITUS VIRUS 774 PVGLB_HSVBC GLYCOPROTEIN1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN 253– COOPER 287PVGLB_ILTV6 GLYCOPROTEIN B PRECURSOR INFECTIOUS LARYNGOTRACHEITIS VIRUS442– (STRAIN 632) (ILIV) 472 PVGLB_ILTVS GLYCOPROTEIN B PRECURSORINFECTIOUS LARYNGOTRACHEITIS VIRUS 452– (STRAIN SA-2) (ILTV) 482PVGLB_ILTVT GLYCOPROTEIN B PRECURSOR INFECTIOUS LARYNGOTRACHEITIS VIRUS452– (STRAIN THORNE V882) (ILTV) 482 PVGLB_MCMVS GLYCOPROTEIN BPRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN 135– 738– SMITH) 163 776PVGLC_HSVII GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/ 467–STRAIN 17) 500 PVGLC_HSVIK GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS(TYPE 1/ 467– STRAIN KOS) 500 PVGLC_HSV2 GLYCOPROTEIN C PRECURSOR HERPESSIMPLEX VIRUS (TYPE 2) 435– 465 PVGLC_HSV23 GLYCOPROTEIN C PRECURSORHERPES SIMPLEX VIRUS (TYPE 2/ 436– STRAIN 333) 466 PVGLC_HSVBCGLYCOPROTEIN GIII PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN 475–COOPER) 507 PVGLC_VZVN GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN351– 513– DUMAS) (VZV) 388 548 PVGLC_VZVS GLYCOPROTEIN GPVVARICELLA-ZOSTER VIRUS (STRAIN 351– 513– SCOTT) (VZV) 388 548PVGLD_HSVEA GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN340– AMI) (EHV-I) 370 PVGLD_HSVEB GLYCOPROTEIN D PRECURSOR EQUINEHERPESVIRUS TYPE 1  41– 390– 70 420 PVGLD_HSVEK GLYCOPROTEIN D PRECURSOREQUINE HERPESVIRUS TYPE 1  41– 390– 70 420 PVGLE_HSVE4 GLYCOPROTEIN EEQUINE HERPESVIRUS TYPE 4  95– 125 PVGLE_HSVEB GLYCOPROTEIN E PRECURSOREQUINE HERPESVIRUS TYPE 1  63– 390– 100 420 PVGLE_HSVEL GLYCOPROTEIN EPRECURSOR EQUINE HERPESVIRUS TYPE 1  63– 392– 100 422 PVGLE_PRVRIGLYCOPROTEIN G1 PRECURSOR PSEUDORABIES VIRUS (STRAIN RICE) 332– (PRV)269 PVGLF_BRSVA FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORYSYNCYTIAL VIRUS 265– 412– (STRAIN A51908) (BRS) 301 511 PVGLF_BRIVCFUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 484–(STRAIN COPENHAGEN) (BR5) 513 PVGLF_BRSVR FUSION GLYCOPROTEIN PRECURSORBOVINE RESPIRATORY SYNCYTIAL VIRUS 484– (STRAIN RB94) (BR5) 513PVGLF_CDVO FUSION GLYCOPROTEIN PRECURSOR CANINE DISTEMPER VIRUS (STRAIN562– ONDERSTEPOORT) (CDV) 596 PVGLF_HRSV1 FUSION GLYCOPROTEIN PRECURSORHUMAN RESPIRATORY SYNCYTIAL VIRUS 484– (SUBGROUP B/STRAIN 18537) 513PVGLF_HRSVA FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIALVIRUS 484– (STRAIN A2) 513 PVGLF_HRSVL FUSION GLYCOPROTEIN PRECURSORHUMAN RESPIRATORY SYNCYTIAL VIRUS 484– (SUBGROUP A/STRAIN LONG) 513PVGLF_HRSVR FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIALVIRUS 484– (STRAIN RSS-2) 513 PVGLF_MEASE FUSION GLYCOPROTEIN PRECURSORMEASLES VIRUS (STRAIN EDMONSTON) 224– 451– 256 484 PVGLF_MEAS1 FUSIONGLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN IP-3-CA 227– 454– 259 487PVGLF_MEASY FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAINYAMAGATA-I) 224– 451– 256 484 PVGLF_MUMPI FUSION GLYCOPROTEIN PRECURSORMUMPS VIRUS (STRAIN SBL-1)  5– 446– 38 474 PVGLF_MUMPM FUSIONGLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN MIYAHARA 446– VACCINE) 474PVGLF_MUMPR FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN RW) 446–474 PVGLF_MUMPS FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN SBL) 5– 446– 38 474 PVGLF_NDV1 FUSION GLYCOPROTEIN PRECURSOR NEWCASTLEDISEASE VIRUS (STRAIN 132– ITALIEN/4S) (NDV) 165 PVGLF_NDVL FUSIONGLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS (STRAIN 132– LAS/46)(NDV) 165 PVGLF_PHODV FUSION GLYCOPROTEIN PRECURSOR PHOCINE DISTEMPERVIRUS 531– 565 PVGLF_PIIHC FUSION GLYCOPROTEIN PRECURSOR HUMANPARAINFLUENZA 1 VIRUS 456– (STRAIN C39) 484 PVGLF_PI3B FUSIONGLYCOPROTEIN PRECURSOR BOVINE PARAINFLUENZA 3 VIRUS 453– 481 PVGLF_PI3H4FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 3 VIRUS 453– (STRAINNIH 47885 481 PVGLF_RTNDK FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS(STRAIN KABETE O) 220– 447– (RDV) 252 480 PVGLF_RTNDL FUSIONGLYCOPROTEIN PRECURSOR RINDERPEST VIRUS (STRAIN L) (RDV) 220– 447– 252480 PVGLF_SEND5 FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAINZ/HOST 460– MUTANTS) 488 PVGLF_SENDF FUSION GLYCOPROTEIN PRECURSORSENDAI VIRUS (STRAIN FUSHIMI) 460– 488 PVGLF_SENDH FUSION GLYCOPROTEINPRECURSOR SENDAI VIRUS (STRAIN HARRIS) 460– 488 PVGLF_SENDJ FUSIONGLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN HVJ) 460– 481 PVGLF_SENDZFUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z) 460– 488 PVGLF_SV5FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS 5 (STRAIN WJ) (SV5) 446– 474PVGLF_TRTV FUSION GLYCOPROTEIN PRECURSOR TURKEY RHINOTRACHEITIS VIRUS(TRTV) 452– 481 PVGLG_HSVEB GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUSTYPE 1 (STRAIN 327– AB4P) (EHV-I) 364 PVGLG_SYNV SPIKE GLYCOPROTEINPRECURSOR SONCHUS YELLOW NET VIRUS (SYNV) 524– 553 PVGLG_V5VIG SPIKEGLYCOPROTEIN PRECURSOR VESICULAR STOMATITIS VIRUS 450– (SEROTYPEINDIANA/STRAIN GLASGOW) 488 PVGLG_VSVJO SPIKE GLYCOPROTEIN PRECURSORVESICULAR STOMATITIS VIRUS 457– (SEROTYPE NEW JERSEY/STRAIN OGDEN) 492PVGLG_VSVO SPIKE GLYCOPROTEIN PRECURSOR VESICULAR STOMATITIS VIRUS 450–(STRAIN ORSAY) 488 PVGLG_VSVSJ SPIKE GLYCOPROTEIN PRECURSOR VESICULARSTOMATITIS VIRUS (STRAIN 450– SAN JUAN) 488 PVGLH_HCMVA GLYCOPROTEIN HPRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN 691– AD169) 719 PVGLH_HCMVTGLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN 690– TOWNE) 718PVGLH_HSV60 GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/ 215–640– STRAIN GS) 247 677 PVGLH_HSVE4 GLYCOPROTEIN H PRECURSOR EQUINEHERPESVIRUS TYPE 4 814– 850 PVGLH_HSVEB GLYCOPROTEIN H PRECURSOR EQUINEHERPESVIRUS TYPE 1 807– 843 PVGLI_HCMVA IMMEDIATE EARLY GLYCOPROTEINPRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN 158– AD169) 194 PVGLM_BUNGE MPOLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 197– 438–  982– 1049– 227 4681020 1084 PVGLM_BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE(ISOLATE L7-1) 190– 220 PVGLM_BUNSII M POLYPROTEIN PRECURSOR BUNYAVIRUSSNOWSHOE HARE 190– 344– 220 381 PVGLM_BUNYW M POLYPROTEIN PRECURSORBUNYAMWERA VIRUS 193– 434–  823– 228 472 854 PVGLM_DUGBV M POLYPROTEINPRECURSOR DUGBE VIRUS 244– 637–  886–  935– 1403– 273 672 915 965 1441PVGLM_HANTB M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN B-1) (KOREAN610– 1081–  HEMORRHAGIC FEVER VIRUS) 641 1119 PVGLM_HANTH M POLYPROTEINPRECURSOR HANTAAN VIRUS (STRAIN HOJO) 188– 612– 1082– 222 643 1120PVGLM_HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN LEE) 188– 612–1083– 222 643 1121 PVGLM_HANTV M POLYPROTEIN PRECURSOR HANTAAN VIRUS(STRAIN 76-118) 188– 612– 1083– 222 643 1121 PVGLM_INSV M POLYPROTEINPRECURSOR IMPATIENS NECROTIC SPOT VIRUS 269– 1028–  (INSV) 307 1062PVGLM_PHV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS (PHV) 616– 1088– 649 1121 PVGLM_PTPV M POLYPROTEIN PRECURSOR PUNTA TORO PHLEBOVIRUS 949–1275–  982 1309 PVGLM_PUUMH M POLYPROTEIN PRECURSOR PUUMALA VIRUS(STRAIN HALLNAS III) 620– 1092–  653 1125 PVGLM_PUUMS M POLYPROTEINPRECURSOR PUUMALA VIRUS (STRAIN SOTKAMO) 620– 1092–  653 1125 PVGLM_RVFVM POLYPROTEIN PRECURSOR RIFT VALLEY FEVER VIRUS (RVFV) 620– 830– 650 863PVGLM_RVFVZ M POLYPROTEIN PRECURSOR RIFT VALLEY FEVER VIRUS (STRAIN 620–830– 1156– ZII-548 MI2) (RVFV) 650 863 1185 PVGLM_SEIU8 M POLYPROTEINPRECURSOR SEOUL VIRUS (STRAIN 80-39) 610– 1031–  641 1119 PVOLM_SEOUR MPOLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 605– 1082–  641 1120PVGLM_SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11) 610–1081–  (SAPPORO RAT VIRUS) 641 1119 PVGLM_UUK M POLYPROTEIN PRECURSORUUKUNIEMI VIRUS (UUK) 431– 966– 468 995 PVGLP_BEY PEPLOMER GLYCOPROTEINPRECURSOR BERNE VIRUS (BEV) 1491–  1526 PVGLY_JUNIN GLYCOPROTEINPOLYPROTEIN PRECURSOR JUNIN ARENAVIRUS  12– 45 PVGLY_LASSG GLYCOPROTEINPOLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN GA391) 237– 263 PVGLY_LASSIGLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN JOSIAH) 238– 266PVGLY_PIARV GLYCOPROTEIN POLYPROTEIN PRECURSOR PICHINDE ARENAVIRUS  12–50 PVGLY_TACV GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS  12– 50PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN V5 12–  89– 50 124 PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBEVIRUS (STRAIN V7)  12–  89– 50 124 PVGLY_TACVT GLYCOPROTEIN POLYPROTEINPRECURSOR TACARIBE VIRUS (STRAIN TRVL 11598)  12–  89– 50 124 PVGNB_CPMVGENOME POLYPROTEIN B COWPEA MOSAIC VIRUS (CPMV) 1527–  1555 PVGNM_CPMVGENOME POLYPROTEIN M COWPEA MOSAIC VIRUS (CPMV) 209– 741– 242 771PVGNM_CPSMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN  50–479– DG) 86 515 PVGNM_RCMV GENOME POLYPROTEIN M RED CLOVER MOTTLE VIRUS(RCMV) 766– 799 PVGP2_EBV PROBABLE MEMBRANE ANTIGEN GP220 EPSTEIN-BARRVIRUS (STRAIN B95-8)  78– (HUMAN HERPESVIRUS 4) 111 PVGP3_EBV ENVELOPEGLYCOPROTEIN GP340 EPSTEIN-BARR VIRUS (STRAIN B95-8)  78– (HUMANHERPESVIRUS 4) 111 PVH02_VACCC LATE PROTEIN H2 VACCINIA VIRUS (STRAINCOPENHAGEN)  54– 89 PVH02_VACCV LATE PROTEIN H2 VACCINIA VIRUS (STRAINWR)  51– 89 PVH02_VARV LATE PROTEIN H2 VARIOLA VIRUS PVH05_VACCC PROTEINH5 VACCINIA VIRUS (STRAIN COPENHAGEN) 115– 149 PVH05_VACCV PROTEIN H5VACCINIA VIRUS (STRAIN WR) 115– 149 PVH05_VARV PROTEIN H5 VARIOLA VIRUS133– 167 PVHEL_LSV PROBABLE HELICASE LILY SYMPTOMLESS VIRUS (LSV) 107–143 PV101_VACCC PROTEIN 11 VACCINIA VIRUS (STRAIN COPENHAGEN)  54– 82PV101_VARV PROTEIN 11 VARIOLA VIRUS  54– 82 PV106_VACCV PROTEIN 16VACCINIA VIRUS (STRAIN WR)  55– 88 PV106_VARV PROTEIN 16 VARIOLA VIRUS 55– 88 PV108_VACCC PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAINCOPENHAGEN) 591– 624 PV108_VACCV PUTATIVE RNA HELICASE 18 VACCINIA VIRUS(STRAIN WR) 591– 624 PV108_VARV PUTATIVE RNA HELICASE 18 VARIOLA VIRUS591– 624 PV1EI_HCMVA 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMANCYTOMEGALOVIRUS (STRAIN 243– AD169) 271 PV1EI_HCMVT 55 KDIMMEDIATE-EARLY PROTEIN 1 HUMAN CYTOMEGALOVIRUS (STRAIN 243– TOWNE) 271PV1F_BIV06 VIRION INFECTIVITY FACTOR BOVINE IMMUNODEFICIENCY VIRUS  42–(ISOLATE 106) (BIV) 78 PV1F_BIV27 VIRION INFECTIVITY FACTOR BOVINEIMMUNODEFICIENCY VIRUS  42– (ISOLATE 127) (BIV) 78 PV1F_SIVGB VIRIONINFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  46– (ISOLATE GB1) 78PV1I_SIVMK VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS (K6W 82– ISOLATE) (SIV-MAC) 111 PVIMP_EBV PROBABLE INTEGRAL MEMBRANE PROTEINBBRF3 EPSTEIN-BARR VIRUS (STRAIN B95-8) 125– (HUMAN HERPESVIRUS 4) 159PVIMP_HCMVA PROBABLE INTEGRAL MEMBRANE PROTEIN HUMAN CYTOMEGALOVIRUS(STRAIN  68– AD169 100 PVIMP_HSVII PROBABLE INTEGRAL MEMBRANE PROTEINHERPUS SIMPLEX VIRUS (TYPE 1/  83– 136–  250– STRAIN 17) 114 171 282PVIMP_HSVKB PROBABLE INTEGRAL MEMBRANE PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN  24–  93–  145–  332– AH4P) (EHV-I) 56 127 180 361 PVIMP_HSVSAINTEGRAL MEMBRANE PROTEIN HERPESVIRUS SAIMIRI (STRAIN II)  76– 111PVINT_SSVI PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 253–291 PVJ05_VACCC PROTEIN J5 VACCINIA VIRUS (STRAIN COPENHAGEN)  54– 85PVJ05_VACCV PROTEIN J5 VACCINIA VIRUS (STRAIN WR)  54– 85 PVJ05_VARVPROTEIN J5 VARIOLA VIRUS  54– 85 PVK04_VACCC PROTEIN K4 VACCINIA VIRUS(STRAIN COPENHAGEN)  87– 120 PVK04_VACCV PROTEIN K4 VACCINIA VIRUS(STRAIN WR)  87– 120 PVK05_VACCC PROTEIN K5 VACCINIA VIRUS (STRAINCOPENHAGEN)  74– 103 PVK05_VACCV PROTEIN K5 VACCINIA VIRUS (STRAIN WR) 87– 116 PVL02_VACCC PROTEIN L2 VACCINIA VIRUS (STRAIN COPENHAGEN)  39–76 PVL02_VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN WR)  39– 76 PVL02_VARVPROTLIN L2 VARIOLA VIRUS  39– 76 PVL03_VACCC PROTEIN L3 VACCINIA VIRUS(STRAIN COPENHAGEN) 292– 322 PVL03_VACCV PROTEIN L3 VACCINIA VIRUS(STRAIN WR) 292– 322 PVL03_VARV PROTEIN L3 VARIOLA VIRUS 291– 321PVL05_VACCV PROTEIN L5 VACCINIA VIRUS (STRAIN WR), AND  16– VACCINIAVIRUS (STRAIN COPENHAGE 45 PVL05_VARV PROTEIN L5 VARIOLA VIRUS  16– 45PVL1_HPI3 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 373– 406PVL2_CRPVK PROBABLE L2 PROTEIN COTTONTAIL RABBIT (SHOPE)  26–PAPILLOMAVIRUS (STRAIN KANSAS) 57 (CRPV) PVL2_HPV05 PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 5  27– 57 PVL2_HPV08 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 8  27– 57 PVL2_HPV1A PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A  26– 56 PVL2_HPV39 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39  29– 285– 59 313 PVL2_HPV42 PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 42 344– 379 PVL2_HPV47 PROBADLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 47  26– 57 PVL2_HPV51 PROBADLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 51  29– 59 PVL2_HPV5B PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 5B  27– 57 PVL2_HPVME PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE ME180  29– 59 PVL2__PCPVI PROBABLE L2 PROTEINPYGMY CHIMPANZEE PAPILLOMAVIRUS  29– TYPE 1 59 PVL96_IRVI L96 PROTEINTIPULA IRIDESCENT VIRUS (TIV) 144– 686– (INSECT IRIDESCENT VIRUS TYPE 1)177 718 PVM1_REOVD MINOR VIRION STRUCTURAL PROTEIN MU-2 REOVIRUS (TYPE3/STRAIN DEARING 280– 324– 318 361 PVM1_REOVL MINOR VIRION STRUCTURALPROTEIN MU-2 REOVIRUS (TYPE 1/STRAIN LANG) 280– 318 PVM21_REOVD MAJORVIRION STRUCTURAL PROTEIN MU-I/MU-IC REOVIRUS (TYPE 3/STRAIN DEARING)168– 199 PVM22_REOVD MAJOR VIRION STRUCTURAL PROTEIN MU-I/MU-IC REOVIRUS(TYPE 3/STRAIN DEARING) 168– 199 PVM2_REOVJ MAJOR VIRION STRUCTURALPROTEIN MU-I/MU-IC REOVIRUS (TYPE 2/STRAIN D5/JONES) 168– 199 PVM2_REOVLMAJOR VIRION STRUCTURAL PROTEIN MU-I/MU-IC REOVIRUS (TYPE 1/STRAIN LANG)168– 199 PVM3_REOVD MAJOR NONSTRUCTURAL PROTEIN MU-NS REOVIRUS (TYPE3/STRAIN DEARING) 333– 364 PVMAT_SV5 MATRIX PROTEIN SIMIAN VIRUS 5(STRAIN W3) (SV5) 308– 342 PVMAT_TRTV MATRIX PROTEIN TURKEYRHINOTRACHEITIS VIRUS (TRTV) 122– 150 PVME1_CVBM E1 GLYCOPROTEIN BOVINECORONAVIRUS (STRAIN MEBUS)  64– 102 PVME1_CVHOC E1 GLYCOPROTEIN HUMANCORONAVIRUS (STRAIN OC43)  64– 102 PVME1_CVMA5 E1 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN A59)  65– 103 PVME1_CVMJH E1 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN JHM)  65– 103 PVME1_CVTKE E1 GLYCOPROTEIN TURKEYENTERIC CORONAVIRUS (TCV)  64– 102 PVME1_IBVB E1 GLYCOPROTEIN AVIANINFECTIOUS BRONCHITIS VIRUS  73– (STRAIN BEAUDETTE) (IBV) 101PVME1_IDVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  73–(STRAIN BEAUDETTE M42) (IBV) 101 PVMEM_EDV PROBABLE MEMBRANE PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 178– (HUMAN HERPESVIRUS 4) 213PVMP_CERV MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS (CERV)  93– 126PVMP_SOCMV MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS  66– 273– 98303 PVMSA_HPBDB MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS(BROWN 201– 269– SHANGHAI DUCK ISOLATE S5) (DHBV) 238 302 PVMSA_HPBDCMAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS (STRAIN 194– 268–CHINA) (DHBV) 227 301 PVMSA_HPBDU MAJOR SURFACE ANTIGEN PRECURSOR DUCKHEPATITIS B VIRUS (DHBV) 157– 231– 190 264 PVMSA_HPBDW MAJOR SURFACEANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS (WHITE 194– 269– SHANGHAI DUCKISOLATE S31) (DHBV) 228 302 PVMSA_HPOGS MAJOR SURFACE ANTIGEN PRECURSORGROUND SQUIRREL HEPATITIS VIRUS 209– 271– (GSHV) 243 307 PVMSA_HPBHEMAJOR SURFACE ANTIGEN PRECURSOR HERON HEPATITIS B VIRUS 159– 236– 195269 PVMSA_HPBV0 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS  70– 98PVMSA_HPBV2 MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPEADW2) 244– 272 PVMSA_HPBV4 MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS BVIRUS (SUBTYPE ADR4) 244– 272 PVMSA_HPBV9 MAJOR SURFACE ANTIGENPRECURSOR HEPATITIS B VIRUS (SUBTYPE ADW/ 244– STRAIN 991) 272PVMSA_HPBVA MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (STRAINALPHA1) 233– 261 PVMSA_HPBVD MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS(SUBTYPE AD)  70– 98 PVMSA_HPBVI MAJOR SURFACE ANTIGEN PRECURSORHEPATITIS B VIRUS (SUBTYPE ADW/ 233– STRAIN INDONESIA/PIDW420) 261PVMSA_HPBVJ MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPEADW/ 233– STRAIN JAPAN/PJDW233) 261 PVMSA_HPBVL MAJOR SURFACE ANTIGENPRECURSOR HEPATITIS B VIRUS (STRAIN LSH/ 233– CHIMPANZEE ISOLATE) 261PVMSA_KPBVN MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE ADR/  70–STRAIN NC-I) 98 PVMSA_HPBVO MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS BVIRUS (SUBTYPE ADW/ 233– STRAIN OKINAWA/PODW282) 261 PVMSA_HPBVP MAJORSURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE ADW/ 244– STRAINPHILIPPINO/PFDW294) 272 PVMSA_HPBVR MAJOR SURFACE ANTIGEN PRECURSORHEPATITIS B VIRUS (SUBTYPE ADR) 244– 272 PVMSA_HPBVS MAJOR SURFACEANTIGEN HEPATITIS B VIRUS (SUBTYPE AR)  70– 98 PVMSA_HPBVW MAJOR SURFACEANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE ADW) 233– 261 PVMSA_HPBVYMAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE AYW) 233– 261PVMSA_HPBVZ MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPEADYW) 233– 261 PVMSA_WHVI MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCKHEPATITIS VIRUS 1 207– 269– 241 305 PVMSA_WHV59 MAJOR SURFACE ANTIGENPRECURSOR WOODCHUCK HEPATITIS VIRUS 59 212– 274– 246 310 PVMSA_WHV7MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 7 212– 274–246 310 PVMSA_WHV8 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITISVIRUS 8 212– 274– 246 310 PVMSA_WHV81 PROBABLE MAJOR SURFACE ANTIGENPRECURSOR WOODCHUCK HEPATITIS VIRUS 8 212– 274– (INFECTIOUS CLONE) 246305 PVMSA_WHVW6 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITISVIRUS W64 125– (ISOLATE PWS23) 161 PVMT2_IAZH MATRIX (M2) PROTEININFLUENZA A VIRUS (STRAIN A/SWINE/  10– IOWA/35/30) 42 PVMT8_MYXVL M-T8PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE)  5– 141– 34 170 PVMT9_MYXVL MT-9PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 246– 282 PVN02_VACCC PROTEIN N2VACCINIA VIRUS (STRAIN COPENHAGEN  31– 68 PVN02_VACCV PROTEIN N2VACCINIA VIRUS (STRAIN WR)  31– 68 PVN02_VARV PROTEIN N2 VARIOLA VIRUS 31– 68 PVN34_ROTPC NONSTRUCTURAL PROTEIN NS34 PORCINE ROTAVIRUS (GROUPC/STRAIN 336– COWDEN) 366 PVNCA_AAV2 DNA REPLICATION PROTEINADENO-ASSOCIATED VIRUS 2 (AAV2) 163– 365– 196 401 PVNCS_PAVII0 PROBABLENONCAPSID PROTEIN NS1 BOVINE PARVOVIRUS (BPV) 180– 346–  439– 217 377471 PVNS1_AIISV4 NONSTRUCTURAL PROTEIN NS1 AFRICAN HORSE SICKNESS VIRUS351– (SEROTYPE 4/STRAIN VACCINE) 380 PVNS1_IAALA NONSTRUCTURAL PROTEINNS1 INFLUENZA A VIRUS (STRAIN A/ 114– ALASKA/6/77) 144 PVNS1_IAANNNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ANN 114–ARBOR/6/60) 144 PVNS1_IACIII NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS(STRAIN A/ 114– CHILE/1/83) 144 PVNS1_IACKO NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ 107– CHICKEN/GERMANY/N/49) 144 PVNS1_IACKJNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 104–CHICKEN/JAPAN/24) 141 PVNS1_IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 107– DUCK/ALBERTA/60/76) 144 PVNS1_IADEI NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 104– DUCK/ENGLAND/1/56) 141PVNS1_IADU3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 104–DUCK/UKRAINE/1/63) 141 PVNS1_IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/FORT 114– MONMOUTH/1/47) 144 PVNS1_IAFOW NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/FORT 114– WARREN/1/50) 144PVNS1_IAFPR NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/FOWL107– PLAGUEVIRUS/ROSTOCK/34) 144 PVNS1_IALE1 NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ 114– LENINGRAD/134/57) 144 PVNS1_IALENNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 114–LENINGRAD/54/1) 144 PVNS1_IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 107– MALLARD/ALBERTA/88/76) 144 PVNS1_IAMANNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107– MALLARD/NEWYORK/6750/78) 144 PVNS1_IAMAO NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 107– MALLARD/NEW YORK/6574/78) 144 PVNS1_IAMYNNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/MYNAH/ 104–HANEDA-THAI/76) 141 PVNS1_IAP10 NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 107– PINTAIL/ALBERTA/119/79) 144 PVNS1_IAPI1NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107–PINTAIL/ALBERTA/121/79) 144 PVNS1_IAPI2 NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ 107– PINTAIL/ALBERTA/268/78) 144PVNS1_IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107–PINTAIL/ALBERTA/355/79) 144 PVNS1_IAPUE NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/PUERTO 114– RICO/5/34) 144 PVNS1_IATKBNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107–TURKEY/BETHLEHEM-GLILIT/1492-B/82) 144 PVNS1_IATKC NONSTRUCTURAL PROTEINNS1 INFLUENZA A VIRUS (STRAIN A/ 107– TURKEY/CANADA/63) 144 PVNS1_IATRSNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/TERN/ 104– SOUTHAFRICA/61) 141 PVNS1_IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS(STRAIN A/TERN/ 107– TURKMENIA/18/72) 144 PVNS1_IAUDO NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 114– UDORN/307/72) 144PVNS1_IAUSS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/USSR/114– 90/77) 144 PVNS1_IAZI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS(STRAIN A/ 107– SWINE/IOWA/15/30 144 PVNS1_INBPA NONSTRUCTURAL PROTEINNS1 INFLUENZA B VIRUS (STRAIN B/PA/79) 266– 295 PVNS1_INCAANONSTRUCTURAL PROTEIN NS1 INFLUENZA C VIRUS (STRAIN C/ANN 222–ARBOR/1/50) 255 PVNS1_INCCA NONSTRUCTURAL PROTEIN NS1 INFLUENZA C VIRUS(STRAIN C/ 222– CALIFORNIA/78) 255 PVNS2_URSVI NONSTRUCTURAL PROTEIN 2HUMAN RESPIRATORY SYNCYTIAL VIRUS  20– (SUBGROUP B/STRAIN 18537) 49PVNS2_HRSVA NONSTRUCTURAL PROTEIN 2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 20– (STRAIN A2) 49 PVNS2_INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA BVIRUS (STRAIN B/LEE/40  48– 77 PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2INFLUENZA B VIRUS (STRAIN B/  48– YAMAGATA/1/73) 77 PVNS4_CVMSNONSTRUCTURAL PROTEIN 4 MURINE CORONAVIRUS MHV (STRAIN S)  17– 45PVNS4_CVPFS NONSTRUCTURAL PROTEIN 4 PORCINE TRANSMISSIBLE  4–GASTROENTERITIS CORONAVIRUS 34 (STRAIN FS77 PVNS4_CVPPU NONSTRUCTURALPROTEIN 4 PORCINE TRANSMISSIBLE  4– GASTROENTERITIS CORONAVIRUS 39(STRAIN PUR PVNS4_CVPRM NONSTRUCTURAL PROTEIN 4 PORCINE RESPIRATORYCORONAVIRUS  4– 39 PVNST_CVTAS 30 KD NONSTRUCTURAL PROTEIN MURINECORONAVIRUS MHV (STRAIN A59)  45– 80 PVNST_CVMJH 30 KD NONSTRUCTURALPROTEIN MURINE CORONAVIRUS MHV (STRAIN JHM)  49– 84 PVNST_INCGLNONSTRUCTURAL PROTEINS NS1-NS2 INFLUENZA C VIRUS (STRAIN C/GREAT 222–LAKES/1167/54) 255 PVNST_INCIH NONSTRUCTURAL PROTEINS NS1-NS2 INFLUENZAC VIRUS (STRAIN C/ 222– JOHANNESBURG/1/66) 255 PVNST_INCMI NONSTRUCTURALPROTEINS NS1-NS2 INFLUENZA C VIRUS (STRAIN C/ 222– MISSISSIPPI/80) 255PVNST_INCYA NONSTRUCTURAL PROTEINS NS1-NS2 INFLUENZA C VIRUS (STRAIN C/222– YAMAGATA/10/81) 255 PVNUA_PRVKA PROBABLE NUCLEAR ANTIGENPSEUDORABIES VIRUS (STRAIN KAPLAN) 756– (PRV) 784 PVNUC_DUVIINUCLEOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/ 297– 441– 61) (DHO) 331470 PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 354–CHICKEN/PENNSYLVANIA/1/83) 388 PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/ 354– EQUINE/LONDON/1416/73) 388 PVNUCJAHPRNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 354– EQUINE/PRAGUE/1/56) 388PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 354–EQUINE/TENNESSEE/5/86) 388 PVNUC_MABVM NUCLEOPROTEIN MARBURG VIRUS(STRAIN MUSOKE)  16– 46 PVNUC_MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAINPOPP)  16– 46 PV001_VACCC PROTEIN 01 VACCINIA VIRUS (STRAIN COPENHAGEN511– 550– 539 581 PV001_VARY PROTEIN 01 VARIOLA VIRUS 511– 539 PVOR1_NMV186 KD PROTEIN NARCISSUS MOSAIC VIRUS (NMV) 121– 641– 150 671 PVORI_PVMR223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN) 1667–  (PVM) 1703PVORI_SMYEA 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE- 121– ASSOCIATEDVIRUS (SMYEAV) 153 PVP03_HSVSA PROBABLE MEMBRANE ANTIGEN 3 HERPESVIRUSSAIMIRI (STRAIN 11) 462– 493 PVP10_NPVAC P10 PROTEIN AUTOGRAPHACALIFORNICA NUCLEAR  4– POLYHEDROSIS VIRUS (ACMNPV) 38 PVP10_NPVOP P10PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID  4– POLYHEDROSIS VIRUS (OPMNPV)38 PVP10_RBSDV PROTEIN S10 RICE BLACK STREAKED DWARF VIRUS 260– (RBSDV)291 PVP19_HSVEB CAPSID ASSEMBLY AND DNA MATURATION PROTEIN EQUINEHERPESVIRUS TYPE 1 (STRAIN 239– 287– AB4P) (EHV-1) 268 325 PVP23_HCMVAPROBABLE CAPSID PROTEIN VP23 HUMAN CYTOMEGALOVIRUS (STRAIN 141– AD169)172 PVP23_HSV6U PROBABLE CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS (TYPE6/  46– 206– STRAIN UGANDA-1102) 79 238 PVP23_HSVEB PROBABLE CAPSIDPROTEIN VP23 EQUINE HERPESVIRUS TYPE 1 (STRAIN  18– AB4P) (EHV-1) 48PVP23_VZVD PROBABLE CAPSID PROTEIN VP23 VARICELLA-ZOSTER VIRUS (STRAIN224– DUMAS) (VZV) 253 PVP2_AHSV4 OUTER CAPSID PROTEIN VP2 AFRICAN HORSESICKNESS VIRUS 408– (SEROTYPE 4/STRAIN VACCINE) 441 PVP2_BTV10 OUTERCAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 10/ 649– ISOLATE USA) 683PVP2_BTV11 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 11/ 558–649– ISOLATE USA) 586 683 PVP2_BTV17 OUTER CAPSID PROTEIN VP2 BLUETONGUEVIRUS (SEROTYPE 17/ 391– 564– ISOLATE USA) 424 593 PVP2_BTVIA OUTERCAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 1/ 654– ISOLATE AUSTRALIA)688 PVP2_BTVIS OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 1/654– ISOLATE SOUTH AFRICA) 688 PVP2_EHDV1 OUTER CAPSID PROTEIN VP2EPIZOOTIC HEMORRHAGIC DISEASE 878– VIRUS (SEROTYPE I) (EHDV-1) 915PVP2_ROTBR RNA BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF) 334–522– 367 557 PVP2_ROTBU RNA BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAINUK) 334– 523– 367 558 PVP2_ROTHW RNA BINDING PROTEIN VP2 HUMAN ROTAVIRUS(SEROTYPE 1/STRAIN 342– 532– WA) 377 567 PVP2_ROTPC RNA BINDING PROTEINVP2 PORCINE ROTAVIRUS (GROUP C/STRAIN 514– 589–  811– COWDEN) 549 617841 PVP2_ROTSI RNA BINDING PROTEIN VP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11)335– 523– 368 558 PVP35_VACCC IMMUNODOMINANT ENVELOPE PROTEIN P35VACCINIA VIRUS (STRAIN COPENHAGEN) 278– 311 PVP35_VACCV IMMUNODOMINANTENVELOPE PROTEIN P35 VACCINIA VIRUS (STRAIN WR) 278– 311 PVP35_VARVIMMUNODOMINANT ENVELOPE PROTEIN P35 VARIOLA VIRUS 279– 312 PVP39_NPVOPMAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 107– POLYHEDROSISVIRUS (OPMNPV) 141 PVP3_EHDVI VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGICDISEASE 383– 734– VIRUS (SEROTYPE 1) (EHDV-1) 412 770 PVP3_EHDVA VP3CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE 383– 734– VIRUS 412 770PVP3_RDV MAJOR 114 KD STRUCTURAL PROTEIN RICE DWARI VIRUS (RDV) 297– 330PVP3_ROTSI INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 652–688 PVP40_EBV CAPSID PROTEIN P40 EPSTEIN BARR VIRUS (STRAIN B95-8) 429–(HUMAN HERPESVIRUS 4) 457 PVP40_IISVSA CAPSID PROTEIN P40 HERPESVIRUSSAIMIRI (STRAIN 11 119– 152 PVP40_ILTVT CAPSID PROTEIN P40 INFECTIOUSLARYNGOTRACHEITIS VIRUS  84– (STRAIN THORNE V882) (ILTV) 119 PVP40_NZVDCAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS (STRAIN 485– DUMAS) (VZV 516PVP47_NPVAC VIRAL TRANSCRIPTION REGULATOR P47 AUTOGRAPHA CALIFORNIANUCLEAR 239– POLYHEDROSIS VIRUS (ACMNPV) 270 PVP4A_VACCC MAJOR COREPROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 553– 591PVP4A_VACCV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN WR)553– 591 PVP4A_VARV MAJOR CORE PROTEIN P4A PRECURSOR VARIOLA VIRUS 554–592 PVP4_ROTGI OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR) 93– 468– 122 499 PVP4_WTV NONSTRUCTURAL PROTEIN PNS4 WOUND TUMOR VIRUS(WTV) 278– 624– 308 659 PVP5_BRD OUTER CAPSID PROTEIN VP5 BROADHAVENVIRUS (BRD)  96– 295– 133 326 PVP5_BTVIA OUTER CAPSID PROTEIN VP5BLUETONGUE VIRUS (SEROTYPE 1/ 295– ISOLATE AUSTRALIA) 324 PVP5_BTVIIOUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ 295– ISOLATESOUTH AFRICA) 324 PVP5_BTVZA OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS(SEROTYPE 1/ 295– ISOLATE USA) 324 PVP5_EHDVI OUTER CAPSID PROTEIN VP5EPIZOOTIC HEMORRHAGIC DISEASE 290– VIRUS (SEROTYPE 1) (EHDV-1) 325PVP5_WTV OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS (WTV) 691– 719PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ 159– ISOLATE USA)187 PVP62_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ 155– 210–ISOLATE USA) 183 245 PVP62_MRDV PROBABLE NONSTRUCTURAL 36.3 KD PROTEINMAIZE ROUGH DWARF VIRUS (MRDV)  25– 222– 61 257 PVP64_NPVOP MAJORENVELOPE GLYCOPROTEIN PRECURSOR ORGYIA PSEUDOTSUGATA MULTICAPSID 285–POLYHEDROSIS VIRUS (OPMNPV) 313 PVP67_NPVAC MAJOR ENVELOPE GLYCOPROTEINPRECURSOR AUTOGRAPHA CALIFORNICA NUCLEAR 281– POLYHEDROSIS VIRUS(ACMNPV) 316 PVP67_NPVGM MAJOR ENVELOPE GLYCOPROTEIN GALLERIA MELLONELLANUCLEAR 198– POLYHEDROSIS VIRUS (GMNPV) 233 PVP6_BTVII VP6 PROTEINBLUETONGUE VIRUS (SEROTYPE 11/ 155– ISOLATE USA) 183 PVP6_BTV17 VP6PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ 155– ISOLATE USA) 183 PVP6_BTV15VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ 159– ISOLATE SOUTH AFRICA) 187PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ 131– ISOLATE USA)159 PVP6_WTV STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (WTV) 180– 209PVP6_WTVNJ STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (STRAIN NJ) 180–(WTV) 209 PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNIA NUCLEAR 405–POLYHEDROSIS VIRUS (ACMNPV) 442 PVP7_WTV NONSTRUCTURAL PROTEIN PNS7WOUND TUMOR VIRUS (WTV) 454– 490 PVP87_NPVOP CAPSID PROTEIN P87 ORGYIAPSEUDOTSUGATA MULTICAPSID  77– POLYHEDROSIS VIRUS (OPMNPV) 112PVP8_BTV10 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 10/ 104–ISOLATE USA) 139 PVP8_BTV11 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS(SEROTYPE 11/ 104– ISOLATE USA) 139 PVP8_BTV13 NONSTRUCTURAL PROTEIN P8BLUETONGUE VIRUS (SEROTYPE 13/ 104– ISOLATE USA) 139 PVP8_BTV17NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 17/ 104– ISOLATEUSA) 139 PVP8_BTVIA NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE1/ 104– ISOLATE AUSTRALIA) 139 PVP8_BTVI5 NONSTRUCTURAL PROTEIN P8BLUETONGUE VIRUS (SEROTYPE 1/ 104– ISOLATE SOUTH AFRICA) 139 PVP8_BTV2ANONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 2/ 104– ISOLATE USA)139 PVP8_RDV OUTER CAPSID PROTEIN P8 RICE DWARF VIRUS (RDV) 374– 412PVP8_WTV OUTER CAPSID PROTEIN P8 WOUND TUMOR VIRUS (WTV) 164– 379– 195412 PVPHE_NPVAC 29 KD POLYHEDRAL ENVELOPE PROTEIN AUTOGRAPHA CALIFORNIANUCLEAR 145– POLYHEDROSIS VIRUS (ACMNPV) 173 PVPHE_NPVOP 32 KDPOLYHEDRAL ENVELOPE PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 122–POLYHEDROSIS VIRUS (OPMNPV) 151 PVPR_HVIA2 VPR PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE  37– 1 (ARV2/SF2 ISOLATE) (HIV-1) 74PVPR_HV2BE VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  41– 2 (ISOLATEBEN) (HIV-2) 73 PVPR_HV2CA VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 41– 2 (ISOLATE CAM2) (HIV-2) 73 PVPR_HV2D1 VPR PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE  41– 2 (ISOLATE D194) (HIV-2) 73 PVPR_HV2D2VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  41– 2 (ISOLATE D205.7)(HIV-2) 73 PVPR_HV2NZ VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  41–2 (ISOLATE NIH-Z) (HIV-2) 73 PVPR_HV2RO VPR PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE  41– 2 (ISOLATE ROD) (HIV-2) 73 PVPR_HV2SBVPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  41– 2 (ISOLATE SBLISY)(HIV-2) 73 PVPR_HV2ST VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  40–2 (ISOLATE ST) (HIV-2) 72 PVPR_SIVCZ VPR PROTEIN CHIMPANZEEIMMUNODEFICIENCY VIRUS  37– (SIV (CPZ)) (CIV) 74 PVPR_SIVMI VPR PROTEINSIMIAN IMMUNODEFICIENCY VIRUS  37– (MM142-83 ISOLATE) (SIV-MAC) 69PVPR_SIVMK VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  37– (K6W ISOLATE)(SIV-MAC) 69 PVPR_SIVML VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  37–(K78 ISOLATE) (SIV-MAC) 69 PVPR_SIVS4 VPR PROTEIN SIMIANIMMUNODEFICIENCY VIRUS  37– (F236/SMIH ISOLATE) (SOOTY MANGA) 69PVPR_SIVSP VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  37– (PBI/BCI3ISOLATE) (SOOTY MANGABE 69 PVPU_HVIB1 VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE  3– 1 (BH10 ISOLATE, HXB3 ISOLATE 33 PVPU_HVIB8 VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE  4– 1 (BH8 ISOLATE) (HIV-1) 33PVPU_HVIBN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  3– 1 (BRAINISOLATE) (HIV-1) 34 PVPU_HVIBR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE  3– 1 (BRH ISOLATE) (HIV-1) 33 PVPU_HVIH2 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE  4– 1 (HXB2 ISOLATE) (HIV-1) 33 PVPU_HVIJRVPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  3– 1 (JRCSF ISOLATE)(HIV-1) 34 PVPU_HVIPV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE  3–1 (PV22 ISOLATE) (HIV-1) 33 PVPU_JSRV VPU PROTEIN SHEEP PULMONARYADENOMATOSIS VIRUS 116– 154 PVPX_LDV VPX PROTEIN LACTATEDEHYDROGENASE-ELEVATING  25– VIRUS (LDV) 55 PVPY_DIVZ ORF-Y PROTEINBOVINE IMMUNODEFICIENCY VIRUS  35– (ISOLATE 127) (BIV) 71 PVRNA_BSMVALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 290– 676– 319 705PVS05_ROTHI NONSTRUCTURAL PROTEIN NCVP2 HUMAN ROTAVIRUS (STRAINIGV-80-3) 198– 230 PVS05_ROWC NONSTRUCTURAL PROTEIN N553 PORCINEROTAVIRUS (GROUP C/STRAIN  88– 358– COWDEN) 119 392 PVS05_ROTSINONSTRUCTURAL PROTEIN NCVP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 315– 347PVS06_ROTBR VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN RF)  55– 92 PVS06_ROTBSVP6 PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN  64– 312– SHINTOKU) 92 340PVS06_ROTBU VP6 PROTEIN BOVINE ROTAVIRUS (STRAIN UK)  55– 92 PVS06_ROTEFVP6 PROTEIN EQUINE ROTAVIRUS (STRAIN FI-14)  55– 92 PVS06_ROTEH VP6PROTEIN EQUINE ROTAVIRUS (STRAIN H-2)  55– 92 PVS06_ROTHI VP6 PROTEINHUMAN ROTAVIRUS (SEROTYPE 1/STRAIN  55– 1076) 92 PVS06_ROTHC VP6 PROTEINHUMAN ROTAVIRUS (GROUP C/STRAIN  64– 312– BRISTOL) 92 340 PVS06_ROTHSVP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN   55– S2) 92 PVS06_ROTHWVP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN  55– 313– WA) 92 349PVS06_ROTPC VP6 PROTEIN PORCINE ROTAVIRUS (GROUP C/STRAIN  64– COWDEN 92PVS06_ROTPO VP6 PROTEIN PORCINE ROTAVIRUS (STRAIN  55– 313– GOTTFRIED)92 349 PVS06_ROTSI VP6 PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11)  55–313– 92 349 PVS08_ROTS1 NONSTRUCTURAL PROTEIN NCVP4 SIMIAN 11 ROTAVIRUS(STRAIN SA11) 274– 302 PVS09_ROTHT GLYCOPROTEIN VP7 HUMAN ROTAVIRUS(SEROTYPE 4/STRAIN 131– ST. THOMAS 3) 159 PVS09_ROTPB GLYCOPROTEIN VP7PORCINE ROTAVIRUS (SEROTYPE 4/ 131– STRAIN BEN-144) 159 PVS10_ROTBNNONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN NCDV)  52– 89PVS10_ROTBU NONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAINUK)  52– 89 PVS10_ROTH2 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS(STRAIN A28)  52– 89 PVS10_ROTH7 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMANROTAVIRUS (STRAIN A64/CLONE  52– 2) 89 PVS10_ROTHJ NONSTRUCTURALGLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE  52– 6 89PVS10_ROTHW NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (SEROTYPE1/STRAIN  52– WA) 89 PVS10_ROTSI NONSTRUCTURAL GLYCOPROTEIN NCVP5 SIMIAN11 ROTAVIRUS (STRAIN SA11)  52– 89 PVS11_ROTHW MINOR OUTER CAPSIDPROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN  99– WA) 130 PVS11_REOVJSIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES) 346– 354PVS11_REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 1/STRAIN LANG) 110–147 PVT1_SFVKA PROTEIN T1 PRECURSOR SHOPE FIBROMA VIRUS (STRAIN KASZA)147– (SFV) 182 PVT2_MYXVL TUMOR NECROSIS FACTOR SOLUBLE RECEPTOR PRECURMYXOMA VIRUS (STRAIN LAUSANNE) 261– 290 PVT2_SFVKA TUMOR NECROSIS FACTORSOLUBLE RECEPTOR PRECUR SHOPE FIBROMA VIRUS (STRAIN KASZA) 211– (SFV)249 PVT3A_CAPV1 PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 116– 150PVTER_EBV PROBABLE DNA PACKAGING PROTEIN EPSTEIN-BARR VIRUS (STRAINB95-8) 166– 505– (HUMAN HERPESVIRUS 4) 199 543 PVTER_HCMVA PROBABLE DNAPACKAGING PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN 176– AD169) 209PVTER_HSVI1 PROBABLE DNA PACKAGING PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 756– CATFISH VIRUS) (CCV) 788 PVX_SEND6 X PROTEIN SENDAI VIRUS(STRAIN 6/94)  57– 93 PY104_A0E07 HYPOTHETICAL 10.4 KD EARLY PROTEINHUMAN ADENOVIRUS TYPE 7  55– 83 PY10K_MSVS HYPOTHETICAL 10.9 KD PROTEINMAIZE STREAK VIRUS (SOUTH-AFRICAN  24– ISOLATE) (MSV) 54 PY10K_WDVHYPOTHETICAL 10 KD PROTEIN WHEAT DWARF VIRUS (WDV)  22– 59 PY119_SSVIHYPOTHETICAL 11.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSVI  29– 64PY11K_PASV HYPOTHETICAL 11.9 KD PROTEIN (ORF VI) PANICUM STREAK VIRUS 29– 61 PY11K_ROTSI HYPOTHETICAL 11 KD PROTEIN IN SEGMENT S11 SIMIAN 11ROTAVIRUS (STRAIN SA11)  53– 87 PY11K_TYDVA HYPOTHETICAL 11.2 KD PROTEINTOBACCO YELLOW DWARF VIRUS (STRAIN  28– AUSTRALIA) (TYDV) 62 PY14K_NPVACHYPOTHETICAL 13.8 KD PROTEIN IN 39 KD PROTEIN 5 REG AUTOGRAPHACALIFORNICA NUCLEAR  65– POLYHEDROSIS VIRUS (ACMNPV) 101 PY18K_SSVIHYPOTHETICAL 18.0 KD PROTEIN (ORF B-166) SULFOLOBUS VIRUS-LIKE PARTICLESSVI 100– 132 PY20K_SSVI HYPOTHETICAL 20.4 KD PROTEIN (ORF E-178)SULFOLOBUS VIRUS-LIKE PARTICLE SSVI 129– 167 PY21K_MSVN HYPOTHETICAL21.7 KD PROTEIN MAIZE STREAK VIRUS (NIGERIAN 122– ISOLATE) (MSV) 155PY2_SOCMV HYPOTHETICAL PROTEIN 2 (ORF II) SOYBEAN CHLOROTIC MOTTLE VIRUS 99– 137 PY38K_NPVAC HYPOTHETICAL 37.7 KD PROTEIN (ORF2) AUTOGRAPHACALIFORNIA NUCLEAR 250– POLYHEDROSIS VIRUS (ACMNPV) 282 PY85K_SSVIHYPOTHETICAL 85.7 KD PROTEIN (ORF C-792) SULFOLOBUS VIRUS-LIKE PARTICLESSVI 274– 543– 312 580 PYB13_FOWPM HYPOTHETICAL BAMHI-ORF 13 PROTEIN(FRAGMENT) FOWLPOX VIRUS (ISOLATE HP-4) 8 114– [MUNICH]) 150 PYDH1_HSVSCHYPOTHETICAL 28.7 KD PROTEIN IN DHFR 3 REGION (ORF HERPESVIRUS SAIMIRI(SUBGROUP C/ 206– STRAIN 488) 244 PYDH3_HSVSC HYPOTHETICAL 9.5 KDPROTEIN IN DHFR 3 REGION (ORF3 HERPESVIRUS SAIMIRI (SUBGROUP C/  69–STRAIN 488) 97 PYEC4_EBV HYPOTHETICAL EC-RF4 PROTEIN EPSTEIN-BARR VIRUS(STRAIN B95-8)  34– (HUMAN HERPESVIRUS 4) 68 PY1O1_CVBM HYPOTHETICALPROTEIN 10RF1 BOVINE CORONAVIRUS  84– 122 PY1OR_CVBF HYPOTHETICALPROTEIN IN NUCLEOCAPSID ORF (10RF) BOVINE CORONA VIRUS (STRAIN F15)  41–137– 75 165 PY1OR_CVBM HYPOTHETICAL PROTEIN IN NUCLEOCAPSID ORF (10RF)BOVINE CORONA VIRUS (STRAIN MEBUS)  41– 137– 74 165 PY1OR_CVIKEHYPOTHETICAL PROTEIN IN NUCLEOCAPSID ORF (10RF) TURKEY ENTERICCORONAVIRUS (TCV)  41– 137– 74 165 PYKR2_EBV HYPOTHETICAL BKRF2 PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8)  67– (HUMAN HERPESVIRUS 4) 100PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 250– (HUMANHERPESVIRUS 4) 284 PYOR1_COYMV HYPOTHETICAL 23 KD PROTEIN (ORF1)COMMELINA YELLOW MOTTLE VIRUS  93– 166– (COYMV) 130 198 PYOR2_COYMVHYPOTHETICAL 15 KD PROTEIN (ORF2) COMMELINA YELLOW MOTTLE VIRUS  23–(COYMV) 56 PYOR3_PVXXC HYPOTHETICAL 12 KD PROTEIN (ORF 3) (FRAGMENT)POTATO VIRUS X (STRAIN XC) (PVX)  7– 39 PYOR3_WCMVM HYPOTHETICAL 13 KDPROTEIN (ORF 3) WHITE CLOVER MOSAIC VIRUS (STRAIN  63– M) (WCMV) 94PYOR3_WCMVO HYPOTHETICAL 13 KD PROTEIN (ORF 3) WHITE CLOVER MOSAIC VIRUS(STRAIN  64– O) (WCMV) 95 PYOR5_ADEGI HYPOTHETICAL 31.5 KD PROTEIN (ORF5) AVIAN ADENOVIRUS GALI 237– 272 PYORG_TTVI HYPOTHETICAL 7.1 KD PROTEINTHERMOPROTEUS TENAX VIRUS 1  5– (STRAIN KRAI) (TTVI) 34 PYORM_TTVIHYPOTHETICAL 38.6 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 233– (STRAINKRAI) (TTVI) 263 PYORP_TTVI HYPOTHETICAL 20.2 KD PROTEIN THERMOPROTEUSTENAX VIRUS 1  91– (STRAIN KRAI) (TTVI) 124 PYP24_RTBV HYPOTHETICAL P24PROTEIN (ORF 1 RICE TUNGRO BACILLIFORM VIRUS 104– 159– (RTBV) 133 191PYP24_RTBVP HYPOTHETICAL P24 PROTEIN (ORF 1) RICE TUNGRO BACILLIFORMVIRUS 104– 159– (ISOLATE PHILIPPINES) (RTUV) 133 191 PYP47_NPVACHYPOTHETICAL 43.5 KD PROTEIN IN P47 3 REGION AUTOGRAPHA CALIFORNIANUCLEAR  23– POLYHEDROSIS VIRUS (ACMNPV) 51 PYRF5_HSV6G HYPOTHETICALPROTEIN RF5 HERPES SIMPLEX VIRUS (TYPE 6/ 180– STRAIN GS) 216 PYRR2_EBVHYPOTHETICAL BRRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  13– (HUMANHERPESVIRUS 4) 42 PYSRI_EBV HYPOTHETICAL BSRF1 PROTEIN EPSTEIN-BARRVIRUS (STRAIN B95-8)  92– (HUMAN HERPESVIRUS 4) 120 PYTRI_EBVHYPOTHETICAL BTRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 306– (HUMANHERPESVIRUS 4) 336 PYVAE_VACCC HYPOTHETICAL 18.2 KD PROTEIN VACCINIAVIRUS (STRAIN COPENHAGEN)  21– 53 PYVAL_VACCV HYPOTHETICAL 9.9 KDPROTEIN VACCINIA VIRUS (STRAIN WR), AND  21– VACCINIA VIRUS (STRAINCOPENHAG 49 PYVBC_VACCC HYPOTHETICAL 10.8 KD PROTEIN VACCINIA VIRUS(STRAIN COPENHAGEN)  22– 53 PYVDG_VACCV HYPOTHETICAL 10.4 KD PROTEINVACCINIA VIRUS (STRAIN WR), AND  31– VACCINIA VIRUS (STRAIN COPENHAGE 64PYVEF_VACCC HYPOTHETICAL 12.9 KD PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN)  8– 42 PYVFC_VACCC HYPOTHETICAL 11.6 KD PROTEIN VACCINIAVIRUS (STRAIN COPENHAGEN)  7– 35 PZNFP_LYCVA ZINC FINGER PROTEINLYMPHOCYTIC CHORIOMENINGITIS VIRUS  29– (STRAIN ARMSTRONG) 57PZNFP_LYCVP ZINC FINGER PROTEIN (FRAGMENT) LYMPHOCYTIC CHORIOMENINGITISVIRUS  8– (STRAIN PASTEUR) 32

TABLE XV RESPIRATORY SYNCYTIAL VIRUS DP107 F2 REGION ANALOG CARBOXYTRUNCATIONS X-YTS-Z X-YTSV-Z X-YTSVI-Z X-YTSVIT-Z X-YTSVITI-ZX-YTSVITIE-Z X-YTSVITIEL-Z X-YTSVITIELS-Z X-YTSVITIELSN-ZX-YTSVITIELSNI-Z X-YTSVITIELSNIK-Z X-YTSVITIELSNIKE-ZX-YTSVITIELSNIKEN-Z X-YTSVITIELSNIKENK-Z X-YTSVITIELSNIKENKC-ZX-YTSVITIELSNIKENKCN-Z X-YTSVITIELSNIKENKCNG-Z X-YTSVITIELSNIKENKCNGT-ZX-YTSVITIELSNIKENKCNGTD-Z X-YTSVITIELSNIKENKCNGTDA-ZX-YTSVITIELSNIKENKCNGTDAK-Z X-YTSVITIELSNIKENKCNGTDAKV-ZX-YTSVITIELSNIKENKCNGTDAKVK-Z X-YTSVITIELSNIKENKCNGTDAKVKL-ZX-YTSVITIELSNIKENKCNGTDAKVKLI-Z X-YTSVITIELSNIKENKCNGTDAKVKLIK-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQ-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQE-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQEL-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELD-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDK-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKY-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYK-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKN-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNA-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAV-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVT-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTE-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTEL-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQ-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQL-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLL-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLM-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQ-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQS-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z (These amino acidsequences are assigned SEQ ID Nos. 448-492 and 16, respectively). Theone letter amino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVI RESPIRATORY SYNCYTIAL VIRUS F2 DP178/DP107 REGION ANALOG AMINOTRUNCATIONS X-QST-Z X-MQST-Z X-LMQST-Z X-LLMQST-Z X-QLLMQST-ZX-LQLLMQST-Z X-ELQLLMQST-Z X-TELQLLMQST-Z X-VTELQLLMQST-ZX-AVTELQLLMQST-Z X-NAVTELQLLMQST-Z X-KNAVTELQLLMQST-ZX-YKNAVTELQLLMQST-Z X-KYKNAVTELQLLMQST-Z X-DKYKNAVTELQLLMQST-ZX-LDKYKNAVTELQLLMQST-Z X-ELDKYKNAVTELQLLMQST-Z X-QELDKYKNAVTELQLLMQST-ZX-KQELDKYKNAVTELQLLMQST-Z X-IKQELDKYKNAVTELQLLMQST-ZX-LIKQELDKYKNAVTELQLLMQST-Z X-KLIKQELDKYKNAVTELQLLMQST-ZX-VKLIKQELDKYKNAVTELQLLMQST-Z X-KVKLIKQELDKYKNAVTELQLLMQST-ZX-AKVKLIKQELDKYKNAVTELQLLMQST-Z X-DAKVKLIKQELDKYKNAVTELQLLMQST-ZX-TDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-GTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-NGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z X-CNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-KCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-NKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-KENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-IKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-NIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-SNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-LSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-ELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-IELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-TIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-ITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-VITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-SVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-ZX-TSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z (These amino acidsequences are assigned SEQ ID Nos. 493-535 and 16, respectively). Theone letter amino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVII RESPIRATORY SYNCYTIAL VIRUS F1 DP178 REGION ANALOG CARBOXYTRUNCATIONS X-FYD-Z X-FYDP-Z X-FYDPL-Z X-FYDPLV-Z X-FYDPLVF-ZX-FYDPLVFP-Z X-FYDPLVFPS-Z X-FYDPLVFPSD-Z X-FYDPLVFPSDE-ZX-FYDPLVFPSDEF-Z X-FYDPLVFPSDEFD-Z X-FYDPLVFPSDEFDA-ZX-FYDPLVFPSDEFDAS-Z X-FYDPLVFPSDEFDASI-Z X-FYDPLVFPSDEFDASIS-ZX-FYDPLVFPSDEFDASISQ-Z X-FYDPLVFPSDEFDASISQV-Z X-FYDPLVFPSDEFDASISQVN-ZX-FYDPLVFPSDEFDASISQVNE-Z X-FYDPLVFPSDEFDASISQVNEK-ZX-FYDPLVFPSDEFDASISQVNEKI-Z X-FYDPLVFPSDEFDASISQVNEKIN-ZX-FYDPLVFPSDEFDASISQVNEKINQ-Z X-FYDPLVFPSDEFDASISQVNEKINQS-ZX-FYDPLVFPSDEFDASISQVNEKINQSL-Z X-FYDPLVFPSDEFDASISQVNEKINQSLA-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAF-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFI-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIR-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRK-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKS-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSD-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDE-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z (These amino acid sequencesare assigned SEQ ID Nos. 536-569 and 17, respectively). The one letteramino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVIII RESPIRATORY SYNCYTIAL VIRUS F1 DP178 REGION ANALOG AMINOTRUNCATIONS X-DELL-Z X-SDELL-Z X-KSDELL-Z X-RKSDELL-Z X-IRKSDELL-ZX-FIRKSDELL-Z X-AFIRKSDELL-Z X-LAFIRKSDELL-Z X-SLAFIRKSDELL-ZX-QSLAFIRKSDELL-Z X-NQSLAFIRKSDELL-Z X-INQSLAFIRKSDELL-ZX-KINQSLAFIRKSDELL-Z X-EKINQSLAFIRKSDELL-Z X-NEKINQSLAFIRKSDELL-ZX-VNEKINQSLAFIRKSDELL-Z X-QVNEKINQSLAFIRKSDELL-ZX-SQVNEKINQSLAFIRKSDELL-Z X-ISQVNEKINQSLAFIRKSDELL-ZX-SISQVNEKINQSLAFIRKSDELL-Z X-ASISQVNEKINQSLAFIRKSDELL-ZX-DASISQVNEKINQSLAFIRKSDELL-Z X-FDASISQVNEKINQSLAFIRKSDELL-ZX-EFDASISQVNEKINQSLAFIRKSDELL-Z X-DEFDASISQVNEKINQSLAFIRKSDELL-ZX-SDEFDASISQVNEKINQSLAFIRKSDELL-Z X-PSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-FPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-VFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-LVFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-PLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-DPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-YDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z (These amino acid sequences areassigned SEQ ID NOs. 570-602, respectively). The one letter amino acidcode is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XIX HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP178 ANALOG CARBOXYTRUNCATIONS X-ITL-Z X-ITLN-Z X-ITLNN-Z X-ITLNNS-Z X-ITLNNSV-ZX-ITLNNSVA-Z X-ITLNNSVAL-Z X-ITLNNSVALD-Z X-ITLNNSVALDP-ZX-ITLNNSVALDPI-Z X-ITLNNSVALDPID-Z X-ITLNNSVALDPIDI-ZX-ITLNNSVALDPIDIS-Z X-ITLNNSVALDPIDISI-Z X-ITLNNSVALDPIDISIE-ZX-ITLNNSVALDPIDISIEL-Z X-ITLNNSVALDPIDISIELN-Z X-ITLNNSVALDPIDISIELNK-ZX-ITLNNSVALDPIDISIELNKA-Z X-ITLNNSVALDPIDISIELNKAK-ZX-ITLNNSVALDPIDISIELNKAKS-Z X-ITLNNSVALDPIDISIELNKAKSD-ZX-ITLNNSVALDPIDISIELNKAKSDL-Z X-ITLNNSVALDPIDISIELNKAKSDLE-ZX-ITLNNSVALDPIDISIELNKAKSDLEE-Z X-ITLNNSVALDPIDISIELNKAKSDLEES-ZX-ITLNNSVALDPIDISIELNKAKSDLEESK-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKE-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEW-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEWI-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEWIR-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEWIRR-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z (These amino acid sequences areassigned SEQ ID NOs. 603-634 and 18, respectively). The one letter aminoacid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XX HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP178 ANALOG AMINOTRUNCATIONS X-RRS-Z X-IRRS-Z X-WIRRS-Z X-EWIRRS-Z X-KEWIRRS-ZX-SKEWIRRS-Z X-ESKEWIRRS-Z X-EESKEWIRRS-Z X-LEESKEWIRRS-ZX-DLEESKEWIRRS-Z X-SDLEESKEWIRRS-Z X-KSDLEESKEWIRRS-ZX-AKSDLEESKEWIRRS-Z X-KAKSDLEESKEWIRRS-Z X-NKAKSDLEESKEWIRRS-ZX-LNKAKSDLEESKEWIRRS-Z X-ELNKAKSDLEESKEWIRRS-Z X-IELNKAKSDLEESKEWIRRS-ZX-SIELNKAKSDLEESKEWIRRS-Z X-ISIELNKAKSDLEESKEWIRRS-ZX-DISIELNKAKSDLEESKEWIRRS-Z X-IDISIELNKAKSDLEESKEWIRRS-ZX-PIDISIELNKAKSDLEESKEWIRRS-Z X-DPIDISIELNKAKSDLEESKEWIRRS-ZX-LDPIDISIELNKAKSDLEESKEWIRRS-Z X-ALDPIDISIELNKAKSDLEESKEWIRRS-ZX-VALDPIDISIELNKAKSDLEESKEWIRRS-Z X-SVALDPIDISIELNKAKSDLEESKEWIRRS-ZX-NSVALDPIDISIELNKAKSDLEESKEWIRRS-Z X-NNSVALDPIDISIELNKAKSDLEESKEWIRRS-ZX-LNNSVALDPIDISIELNKAKSDLEESKEWIRRS-ZX-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z (These amino acid sequences areassigned SEQ ID NOs. 635-665 and 865, respectively). The one letteramino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXI HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP107 ANALOG CARBOXYTRUNCATIONS X-ALG-Z X-ALGV-Z X-ALGVA-Z X-ALGVAT-Z X-ALGVATS-ZX-ALGVATSA-Z X-ALGVATSAQ-Z X-ALGVATSAQI-Z X-ALGVATSAQIT-ZX-ALGVATSAQITA-Z X-ALGVATSAQITAA-Z X-ALGVATSAQITAAV-ZX-ALGVATSAQITAAVA-Z X-ALGVATSAQITAAVAL-Z X-ALGVATSAQITAAVALV-ZX-ALGVATSAQITAAVALVE-Z X-ALGVATSAQITAAVALVEA-Z X-ALGVATSAQITAAVALVEAK-ZX-ALGVATSAQITAAVALVEAKQ-Z X-ALGVATSAQITAAVALVEAKQA-ZX-ALGVATSAQITAAVALVEAKQAR-Z X-ALGVATSAQITAAVALVEAKQARS-ZX-ALGVATSAQITAAVALVEAKQARSD-Z X-ALGVATSAQITAAVALVEAKQARSDI-ZX-ALGVATSAQITAAVALVEAKQARSDIE-Z X-ALGVATSAQITAAVALVEAKQARSDIEK-ZX-ALGVATSAQITAAVALVEAKQARSDIEKL-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLK-ZX-ALGVATSAQITAAVALVEAKQARSDIEKLKE-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLKEA-ZX-ALGVATSAQITAAVALVEAKQARSDIEKLKEAI-ZX-ALGVATSAQITAAVALVEAKQARSDIEKLKEAIR-Z (These amino acid sequences areassigned SEQ ID NOs. 666-696 and 19, respectively). The one letter aminoacid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXII HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP107 ANALOG AMINOTRUNCATIONS X-IRD-Z X-AIRD-Z X-EAIRD-Z X-KEAIRD-Z X-LKEAIRD-ZX-KLKEAIRD-Z X-EKLKEAIRD-Z X-IEKLKEAIRD-Z X-DIEKLKEAIRD-ZX-SDIEKLKEAIRD-Z X-RSDIEKLKEAIRD-Z X-ARSDIEKLKEAIRD-ZX-QARSDIEKLKEAIRD-Z X-KQARSDIEKLKEAIRD-Z X-AKQARSDIEKLKEAIRD-ZX-EAKQARSDIEKLKEAIRD-Z X-VEAKQARSDIEKLKEAIRD-Z X-LVEAKQARSDIEKLKEAIRD-ZX-ALVEAKQARSDIEKLKEAIRD-Z X-VALVEAKQARSDIEKLKEAIRD-ZX-AVALVEAKQARSDIEKLKEAIRD-Z X-AAVALVEAKQARSDIEKLKEAIRD-ZX-TAAVALVEAKQARSDIEKLKEAIRD-Z X-ITAAVALVEAKQARSDIEKLKEAIRD-ZX-QITAAVALVEAKQARSDIEKLKEAIRD-Z X-AQITAAVALVEAKQARSDIEKLKEAIRD-ZX-SAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-TSAQITAAVALVEAKQARSDIEKLKEAIRD-ZX-ATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-VATSAQITAAVALVEAKQARSDIEKLKEAIRD-ZX-GVATSAQITAAVALVEAKQARSDIEKLKEAIRD-ZX-LGVATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z (These amino acid sequences areassigned SEQ ID NOs. 697-727 and 923, respectively). The one letteramino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXIII REPRESENTATIVE DP107/DP178 ANALOG ANTIVIRAL PEPTIDESAnti-Respiratory syncytial virus peptidesX-TSVITIELSNIKENKCNGTDAKVKLIKQELDKYKN-ZX-SVITIELSNIKENKCNGTDAKVKLIKQELDKYKNA-ZX-VITIELSNIKENKCNGTDAKVKLIKQELDKYKNAV-ZX-VAVSKVLHLEGEVNKIALLSTNKAVVSLSNGVS-ZX-AVSKVLHLEGEVNKIALLSTNKAVVSLSNGVSV-ZX-VSKVLHLEGEVNKIALLSTNKAVVSLSNGVSVL-ZX-SKVLHLEGEVNKIALLSTNKAVVSLSNGVSVLT-ZX-KVLHLEGEVNKIALLSTNKAVVSLSNGVSVLTS-ZX-LEGEVNKIALLSTNKAVVSLSNGVSVLTSKVLD-ZX-GEVNKIALLSTNKAVVSLSNGVSVLTSKVLDLK-ZX-EVNKIALLSTNKAVVSLSNGVSVLTSKVLDLKN-ZX-VNKIALLSTNKAVVSLSNGVSVLTSKVLDLKNY-ZX-NKIALLSTNKAVVSLSNGVSVLTSKVLDLKNYI-ZX-KIALLSTNKAVVSLSNGVSVLTSKVLDLKNYID-ZX-IALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDK-ZX-ALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ-ZX-VAVSKVLHLEGEVNKIALLSTNKAVVSLSNGVS-ZX-AVSKVLHLEGEVNKIALLSTNKAVVSLSNGVSV-ZX-VSKVLHLEGEVNKIALLSTNKAVVSLSNGVSVL-ZX-SKVLHLEGEVNKIALLSTNKAVVSLSNGVSVLT-ZX-KVLHLEGEVNKIALLSTNKAVVSLSNGVSVLTS-ZX-LEGEVNKIALLSTNKAVVSLSNGVSVLTSKVLD-ZX-GEVNKIALLSTNKAVVSLSNGVSVLTSKVLDLK-ZX-EVNKIALLSTNKAVVSLSNGVSVLTSKVLDLKN-ZX-VNKIALLSTNKAVVSLSNGVSVLTSKVLDLKNY-ZX-NKIALLSTNKAVVSLSNGVSVLTSKVLDLKNYI-ZX-KIALLSTNKAVVSLSNGVSVLTSKVLDLKNYID-ZX-IALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDK-ZX-ALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ-Z Anti-human parainfluenza virus 3peptides X-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRSN-ZX-LNNSVALDPIDISIELNKAKSDLEESKEWIRRSNQ-ZX-NNSVALDPIDISIELNKAKSDLEESKEWIRRSNQK-ZX-NSVALDPIDISIELNKAKSDLEESKEWIRRSNQKL-ZX-SVALDPIDISIELNKAKSDLEESKEWIRRSNQKLD-ZX-VALDPIDISIELNKAKSDLEESKEWIRRSNQKLDS-ZX-ALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI-ZX-LDPIDISIELNKAKSDLEESKEWIRRSNQKLDSIG-ZX-DPIDISIELNKAKSDLEESKEWIRRSNQKLDSIGN-ZX-PIDISIELNKAKSDLEESKEWIRRSNQKLDSIGNW-ZX-IDISIELNKAKSDLEESKEWIRRSNQKLDSIGNWH-ZX-DISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQ-ZX-ISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQS-ZX-SIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSS-ZX-IELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSST-ZX-ELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSSTT-ZX-TAAVALVEAKQARSDIEKLKEAIRDTNKAVQSVQS-ZX-AVALVEAKQARSDIEKLKEAIRDTNKAVQSVQSSI-ZX-LVEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNL-ZX-VEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLI-ZX-EAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIV-ZX-AKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVA-ZX-KQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAI-ZX-QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIK-ZX-ARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKS-ZX-RSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSV-ZX-SDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQ-ZX-KLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVN-ZX-LKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNK-ZX-AIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIV-Z Anti-simian immunodeficiencyvirus peptides X-WQEWERKVDFLEENITALLEEAQIQQEKNMYELQK-ZX-QEWERKVDFLEENITALLEEAQIQQEKNMYELQKL-ZX-EWERKVDFLEENITALLEEAQIQQEKNMYELQKLN-ZX-WERKVDFLEENITALLEEAQIQQEKNMYELQKLNS-ZX-ERKVDFLEENITALLEEAQIQQEKNMYELQKLNSW-ZX-RKVDFLEENITALLEEAQIQQEKNMYELQKLNSWD-ZX-KVDFLEENITALLEEAQIQQEKNMYELQKLNSWDV-ZX-VDFLEENITALLEEAQIQQEKNMYELQKLNSWDVF-ZX-DFLEENITALLEEAQIQQEKNMYELQKLNSWDVFG-ZX-FLEENITALLEEAQIQQEKNMYELQKLNSWDVFGN-Z Anti-measles virus peptidesX-LHRIDLGPPISLERLDVGTNLGNAIAKLEAKELL-ZX-HRIDLGPPISLERLDVGTNLGNAIAKLEAKELLE-ZX-RIDLGPPISLERLDVGTNLGNAIAKLEAKELLES-ZX-IDLGPPISLERLDVGTNLGNAIAKLEAKELLESS-ZX-DLGPPISLERLDVGTNLGNAIAKLEAKELLESSD-ZX-LGPPISLERLDVGTNLGNAIAKLEAKELLESSDQ-ZX-GPPISLERLDVGTNLGNAIAKLEAKELLESSDQI-ZX-PPISLERLDVGTNLGNAIAKLEAKELLESSDQIL-ZX-PISLERLDVGTNLGNAIAKLEAKELLESSDQILR-ZX-SLERLDVGTNLGNAIAKLEAKELLESSDQILRSM-ZX-LERLDVGTNLGNAIAKLEAKELLESSDQILRSMK-Z The one letter amino acid code isused.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

5.4. Synthesis of Peptides

The peptides of the invention may be synthesized or prepared bytechniques well known in the art. See, for example, Creighton, 1983,Proteins: Structures and Molecular Principles, W.H. Freeman and Co., NY,which is incorporated herein by reference in its entirety. Shortpeptides, for example, can be synthesized on a solid support or insolution. Longer peptides may be made using recombinant DNA techniques.Here, the nucleotide sequences encoding the peptides of the inventionmay be synthesized, and/or cloned, and expressed according to techniqueswell known to those of ordinary skill in the art. See, for example,Sambrook, et al., 1989, Molecular Cloning, A Laboratory Manual, Vols.1-3, Cold Spring Harbor Press, NY.

The peptides of the invention may alternatively be synthesized such thatone or more of the bonds which link the amino acid residues of thepeptides are non-peptide bonds. These alternative non-peptide bonds maybe formed by utilizing reactions well known to those in the art, and mayinclude, but are not limited to imino, ester, hydrazide, semicarbazide,and azo bonds, to name but a few. In yet another embodiment of theinvention, peptides comprising the sequences described above may besynthesized with additional chemical groups present at their aminoand/or carboxy termini, such that, for example, the stability,bioavailability, and/or inhibitory activity of the peptides is enhanced.For example, hydrophobic groups such as carbobenzoxyl, dansyl, ort-butyloxycarbonyl groups, may be added to the peptides' amino termini.Likewise, an acetyl group or a 9-fluorenylmethoxy-carbonyl group may beplaced at the peptides' amino termini. (See “X” in Tables I to IV,above.) Additionally, the hydrophobic group, t-butyloxycarbonyl, or anamido group may be added to the peptides' carboxy termini. (See “Z” inTables I to IV, above.)

Further, the peptides of the invention may be synthesized such thattheir steric configuration is altered. For example, the D-isomer of oneor more of the amino acid residues of the peptide may be used, ratherthan the usual L-isomer.

Still further, at least one of the amino acid residues of the peptidesof the invention may be substituted by one of the well knownnon-naturally occurring amino acid residues. Alterations such as thesemay serve to increase the stability, bioavailability and/or inhibitoryaction of the peptides of the invention.

Any of the peptides described above may, additionally, have amacromolecular carrier group covalently attached to their amino and/orcarboxy termini. Such macromolecular carrier groups may include, forexample, lipid-fatty acid conjugates, polyethylene glycol, carbohydratesor additional peptides. “X”, in Tables I to IV, above, may thereforeadditionally represent any of the above macromolecular carrier groupscovalently attached to the amino terminus of a peptide, with anadditional peptide group being preferred. Likewise, “Z”, in Tables I toIV, may additionally represent any of the macromolecular carrier groupsdescribed above.

5.5. Assays for Anti-Membrane Fusion Activity

Described herein, are methods for ability of a compound, such as thepeptides of the invention, to inhibit membrane fusion events.Specifically, assays for cell fusion events are described in Section5.5.1, below, and assays for antiviral activity are described in Section5.5.2, below.

5.5.1. Assays for Cell Fusion Events

Assays for cell fusion events are well known to those of skill in theart, and may be used in conjunction, for example, with the peptides ofthe invention to test the peptides' antifusogenic capabilities.

Cell fusion assays are generally performed in vitro. Such an assay maycomprise culturing cells which, in the absence of any treatment wouldundergo an observable level of syncytial formation. For example,uninfected cells may be incubated in the presence of cells chronicallyinfected with a virus that induces cell fusion. Such viruses mayinclude, but are not limited to, HIV, SIV, or respiratory syncytialvirus.

For the assay, cells are incubated in the presence of a peptide to beassayed. For each peptide, a range of peptide concentrations may betested. This range should include a control culture wherein no peptidehas been added.

Standard conditions for culturing cells, well known to those of ordinaryskill in the art, are used. After incubation for an appropriate period(24 hours at 37° C., for example) the culture is examinedmicroscopically for the presence of multinucleated giant cells, whichare indicative of cell fusion and syncytial formation. Well knownstains, such as crystal violet stain, may be used to facilitate thevisualization of syncytial formation.

5.5.2. Assays for Antiviral Activity

The antiviral activity exhibited by the peptides of the invention may bemeasured, for example, by easily performed in vitro assays, such asthose described below, which can test the peptides' ability to inhibitsyncytia formation, or their ability to inhibit infection by cell-freevirus. Using these assays, such parameters as the relative antiviralactivity of the peptides, exhibit against a given strain of virus and/orthe strain specific inhibitory activity of the peptide can bedetermined.

A cell fusion assay may be utilized to test the peptides' ability toinhibit viral-induced, such as HIV-induced, syncytia formation in vitro.Such an assay may comprise culturing uninfected cells in the presence ofcells chronically infected with a syncytial-inducing virus and a peptideto be assayed. For each peptide, a range of peptide concentrations maybe tested. This range should include a control culture wherein nopeptide has been added. Standard conditions for culturing, well known tothose of ordinary skill in the art, are used. After incubation for anappropriate period (24 hours at 37° C., for example) the culture isexamined microscopically for the presence of multinucleated giant cells,which are indicative of cell fusion and syncytia formation. Well knownstains, such as crystal violet stain, may be used to facilitatesyncytial visualization. Taking HIV as an example, such an assay wouldcomprise CD-4⁺ cells (such as Molt or CEM cells, for example) culturedin the presence of chronically HIV-infected cells and a peptide to beassayed.

Other well known characteristics of viral infection may also be assayedto test a peptide's antiviral capabilities. Once again taking HIV as anexample, a reverse transcriptase (RT) assay may be utilized to test thepeptides' ability to inhibit infection of CD-4⁺ cells by cell-free HIV.Such an assay may comprise culturing an appropriate concentration (i.e.,TCID50) of virus and CD-4+ cells in the presence of the peptide to betested. Culture conditions well known to those in the art are used. Asabove, a range of peptide concentrations may be used, in addition to acontrol culture wherein no peptide has been added. After incubation foran appropriate period (e.g., 7 days) of culturing, a cell-freesupernatant is prepared, using standard procedures, and tested for thepresent of RT activity as a measure of successful infection. The RTactivity may be tested using standard techniques such as those describedby, for example, Goff et al. (Goff, S. et al., 1981, J. Virol.38:239-248) and/or Willey et al. (Willey, R. et al., 1988, J. Virol.62:139-147). These references are incorporated herein by reference intheir entirety.

Standard methods which are well-known to those of skill in the art maybe utilized for assaying non-retroviral activity. See, for example,Pringle et al. (Pringle, C. R. et al., 1985, J. Medical Virology17:377-386) for a discussion of respiratory syncytial virus andparainfluenza virus activity assay techniques. Further, see, forexample, “Zinsser Microbiology”, 1988, Joklik, W. K. et al., eds.,Appleton & Lange, Norwalk, Conn., 19th ed., for a general review of suchtechniques. These references are incorporated by reference herein intheir entirety. In addition, the Examples presented below, in Sections17, 18, 26 and 27 each provide additional assays for the testing of acompound's antiviral capability.

In vivo assays may also be utilized to test, for example, the antiviralactivity of the peptides of the invention. To test for anti-HIVactivity, for example, the in vivo model described in Barnett et al.(Barnett, S. W. et al., 1994, Science 266:642-646) may be used.

Additionally, anti-RSV activity can be assayed in vivo via well knownmouse models. For example, RSV can be administered intranasally to miceof various inbred strains. Virus replicates in lungs of all strains, butthe highest titers are obtained in P/N, C57L/N and DBA/2N mice.Infection of BALB/c mice produces an asymptomatic bronchiolitischaracterized by lymphocytic infiltrates and pulmonary virus titers of104 to 10⁵ pfu/g of lung tissue (Taylor, G. et al., 1984, Infect. Immun.43:649-655).

Cotton rat models of RSV are also well known. Virus replicates to hightiter in the nose and lungs of the cotton rat but produces few if anysigns of inflammation.

5.6. Uses of the Peptides of the Invention

The peptides of the invention may be utilized as antifusogenic orantiviral compounds, or as compounds which modulate intracellularprocesses involving coiled coil peptide structures. Further, suchpeptides may be used to identify agents which exhibit antifusogenic,antiviral or intracellular modulatory activity. Still further, thepeptides of the invention may be utilized as organism or viraltype/subtype-specific diagnostic tools.

The antifusogenic capability of the peptides of the invention mayadditionally be utilized to inhibit or treat/ameliorate symptoms causedby processes involving membrane fusion events. Such events may include,for example, virus transmission via cell-cell fusion, abnormalneurotransmitter exchange via cell-fusion, and sperm-egg fusion.Further, the peptides of the invention may be used to inhibit freeviral, such as retroviral, particularly HIV, transmission to uninfectedcells wherein such viral infection involves membrane fusion events orinvolves fusion of a viral structure with a cell membrane. Among theintracellular disorders involving coiled coil peptides structures whichmay be ameliorated by the peptides of the invention are disordersinvolving, for example, bacterial toxins.

With respect to antiviral activity, the viruses whose transmission maybe inhibited by the peptides of the invention include, but are notlimited to all strains of the viruses listed above, in Tables V throughVII, and 1× through XIV.

These viruses include, for example, human retroviruses, particularlyHIV-1 and HIV-2 and the human T-lymphocyte viruses (HTLV-I and II). Thenon-human retroviruses whose transmission may be inhibited by thepeptides of the invention include, but are not limited to bovineleukosis virus, feline sarcoma and leukemia viruses, simianimmunodeficiency, sarcoma and leukemia viruses, and sheep progresspneumonia viruses.

Non retroviral viruses whose transmission may be inhibited by thepeptides of the invention include, but are not limited to humanrespiratory syncytial virus, canine distemper virus, newcastle diseasevirus, human parainfluenza virus, influenza viruses, measles viruses,Epstein-Barr viruses, hepatitis B viruses, and simian Mason-Pfizerviruses.

Non enveloped viruses whose transmission may be inhibited by thepeptides of the invention include, but are not limited to picornavirusessuch as polio viruses, hepatitis A virus, enterovirus, echoviruses andcoxsackie viruses, papovaviruses such as papilloma virus, parvoviruses,adenoviruses and reoviruses.

As discussed more fully, below, in Section 5.5.1 and in the Examplepresented, below, in Section 8, DP107, DP178, DP107 analog and DP178analog peptides form non-covalent protein-protein interactions which arerequired for normal activity of the virus. Thus, the peptides of theinvention may also be utilized as components in assays for theidentification of compounds that interfere with such protein-proteininteractions and may, therefore, act as antiviral agents. These assaysare discussed, below, in Section 5.5.1.

As demonstrated in the Example presented below in Section 6, theantiviral activity of the peptides of the invention may show apronounced type and subtype specificity, i.e., specific peptides may beeffective in inhibiting the activity of only specific viruses. Thisfeature of the invention presents many advantages. One such advantage,for example, lies in the field of diagnostics, wherein one can use theantiviral specificity of the peptide of the invention to ascertain theidentity of a viral isolate. With respect to HIV, one may easilydetermine whether a viral isolate consists of an HIV-1 or HIV-2 strain.For example, uninfected CD-4+ cells may be co-infected with an isolatewhich has been identified as containing HIV the DP178 (SEQ ID: 1)peptide, after which the retroviral activity of cell supernatants may beassayed, using, for example, the techniques described above in Section5.2. Those isolates whose retroviral activity is completely or nearlycompletely inhibited contain HIV-1. Those isolates whose viral activityis unchanged or only reduced by a small amount, may be considered to notcontain HIV-1. Such an isolate may then be treated with one or more ofthe other DP178 peptides of the invention, and subsequently be testedfor its viral activity in order to determine the identify of the viralisolate. The DP107 and DP178 analogs of the invention may also beutilized in a diagnostic capacity specific to the type and subtype ofvirus or organism in which the specific peptide sequence is found. Adiagnostic procedure as described, above, for DP178, may be used inconjunction with the DP107/DP178 analog of interest.

5.6.1. Screening Assays

As demonstrated in the Example presented in Section 8, below, DP107 andDP178 portions of the TM protein gp41 form non-covalent protein-proteininteractions. As is also demonstrated, the maintenance of suchinteractions is necessary for normal viral infectivity. Thus, compoundswhich bind DP107, bind DP178, and/or act to disrupt normal DP107/DP178protein-protein interactions may act as antifusogenic, antiviral orcellular modulatory agents. Described below are assays for theidentification of such compounds. Note that, while, for ease and clarityof discussion, DP107 and DP178 peptides will be used as components ofthe assays described, but it is to be understood that any of the DP107analog or DP178 analog peptides described, above, in Sections 5.1through 5.3 may also be utilized as part of these screens for compounds.

Compounds which may be tested for an ability to bind DP107, DP178,and/or disrupt DP107/DP178 interactions, and which therefore,potentially represent antifusogenic, antiviral or intracellularmodulatory compounds, include, but are not limited to, peptides made ofD- and/or L-configuration amino acids (in, for example, the form ofrandom peptide libraries; see Lam, K. S. et al. 1991, Nature 354:82-84),phosphopeptides (in, for example, the form of random or partiallydegenerate, directed phosphopeptide libraries; see, for example,Songyang, Z. et al., 1993, Cell 72:767-778), antibodies, and smallorganic or inorganic molecules. Synthetic compounds, natural products,and other sources of potentially effective materials may be screened ina variety of ways, as described in this Section.

The compounds, antibodies, or other molecules identified may be tested,for example, for an ability to inhibit cell fusion or viral activity,utilizing, for example, assays such as those described, above, inSection 5.5.

Among the peptides which may be tested are soluble peptides comprisingDP107 and/or DP178 domains, and peptides comprising DP107 and/or DP178domains having one or more mutations within one or both of the domains,such as the M41-P peptide described, below, in the Example presented inSection 8, which contains a isoleucine to proline mutation within theDP178 sequence.

In one embodiment of such screening methods is a method for identifyinga compound to be tested for antiviral ability comprising:

-   -   (a) exposing at least one compound to a peptide comprising a        DP107 peptide for a time sufficient to allow binding of the        compound to the DP107 peptide;    -   (b) removing non-bound compounds; and    -   (c) determining the presence of the compound bound to the DP107        peptide,        thereby identifying an agent to be tested for antiviral ability.

In a second embodiment of such screening methods is a method foridentifying a compound to be tested for antiviral ability comprising:

-   -   (a) exposing at least one compound to a peptide comprising a        DP178 peptide for a time sufficient to allow binding of the        compound to the DP178 peptide;    -   (b) removing non-bound compounds; and    -   (c) determining the presence of the compound bound to the DP178        peptide,        thereby identifying an agent to be tested for antiviral ability.

One method utilizing these types of approaches that may be pursued inthe isolation of such DP107-binding or DP178-binding compounds is anassay which would include the attachment of either the DP107 or theDP178 peptide to a solid matrix, such as, for example, agarose orplastic beads, microtiter plate wells, petri dishes, or membranescomposed of, for example, nylon or nitrocellulose. In such an assaysystem, either the DP107 or DP178 protein may be anchored onto a solidsurface, and the compound, or test substance, which is not anchored, islabeled, either directly or indirectly. In practice, microtiter platesare conveniently utilized. The anchored component may be immobilized bynon-covalent or covalent attachments. Non-covalent attachment may beaccomplished simply by coating the solid surface with a solution of theprotein and drying. Alternatively, an immobilized antibody, preferably amonoclonal antibody, specific for the protein may be used to anchor theprotein to the solid surface. The surfaces may be prepared in advanceand stored.

In order to conduct the assay, the labeled compound is added to thecoated surface containing the anchored DP107 or DP178 peptide. After thereaction is complete, unreacted components are removed (e.g., bywashing) under conditions such that any complexes formed will remainimmobilized on the solid surface. The detection of complexes anchored onthe solid surface can be accomplished in a number of ways. Where thecompound is pre-labeled, the detection of label immobilized on thesurface indicates that complexes were formed. Where the labeledcomponent is not pre-labeled, an indirect label can be used to detectcomplexes anchored on the surface; e.g., using a labeled antibodyspecific for the compound (the antibody, in turn, may be directlylabeled or indirectly labeled with a labeled anti-Ig antibody).

Alternatively, such an assay can be conducted in a liquid phase, thereaction products separated from unreacted components, and complexesdetected; e.g., using an immobilized antibody specific for DP107 orDP178, whichever is appropriate for the given assay, or ab antibodyspecific for the compound, i.e., the test substance, in order to anchorany complexes formed in solution, and a labeled antibody specific forthe other member of the complex to detect anchored complexes.

By utilizing procedures such as this, large numbers of types ofmolecules may be simultaneously screened for DP107 or DP178-bindingcapability, and thus potential antiviral activity.

Further, compounds may be screened for an ability to inhibit theformation of or, alternatively, disrupt DP107/DP178 complexes. Suchcompounds may then be tested for antifusogenic, antiviral orintercellular modulatory capability. For ease of description, DP107 andDP178 will be referred to as “binding partners.” Compounds that disruptsuch interactions may exhibit antiviral activity. Such compounds mayinclude, but are not limited to molecules such as antibodies, peptides,and the like described above.

The basic principle of the assay systems used to identify compounds thatinterfere with the interaction between the DP107 and DP178 peptidesinvolves preparing a reaction mixture containing peptides underconditions and for a time sufficient to allow the two peptides tointeract and bind, thus forming a complex. In order to test a compoundfor disruptive activity, the reaction is conducted in the presence andabsence of the test compound, i.e., the test compound may be initiallyincluded in the reaction mixture, or added at a time subsequent to theaddition of one of the binding partners; controls are incubated withoutthe test compound or with a placebo. The formation of any complexesbetween the binding partners is then detected. The formation of acomplex in the control reaction, but not in the reaction mixturecontaining the test compound indicates that the compound interferes withthe interaction of the DP107 and DP178 peptides.

The assay for compounds that interfere with the interaction of thebinding partners can be conducted in a heterogeneous or homogeneousformat. Heterogeneous assays involve anchoring one of the bindingpartners onto a solid phase and detecting complexes anchored on thesolid phase at the end of the reaction. In homogeneous assays, theentire reaction is carried out in a liquid phase. In either approach,the order of addition of reactants can be varied to obtain differentinformation about the compounds being tested. For example, testcompounds that interfere with the interaction between the bindingpartners, e.g., by competition, can be identified by conducting thereaction in the presence of the test substance; i.e., by adding the testsubstance to the reaction mixture prior to or simultaneously with thebinding partners. On the other hand, test compounds that disruptpreformed complexes, e.g. compounds with higher binding constants thatdisplace one of the binding partners from the complex, can be tested byadding the test compound to the reaction mixture after complexes havebeen formed. The various formats are described briefly below.

In a heterogeneous assay system, one binding partner, e.g., either theDP107 or DP178 peptide, is anchored onto a solid surface, and itsbinding partner, which is not anchored, is labeled, either directly orindirectly. In practice, microtiter plates are conveniently utilized.The anchored species may be immobilized by non-covalent or covalentattachments. Non-covalent attachment may be accomplished simply bycoating the solid surface with a solution of the protein and drying.Alternatively, an immobilized antibody specific for the protein may beused to anchor the protein to the solid surface. The surfaces may beprepared in advance and stored.

In order to conduct the assay, the binding partner of the immobilizedspecies is added to the coated surface with or without the testcompound. After the reaction is complete, unreacted components areremoved (e.g., by washing) and any complexes formed will remainimmobilized on the solid surface. The detection of complexes anchored onthe solid surface can be accomplished in a number of ways. Where thebinding partner was pre-labeled, the detection of label immobilized onthe surface indicates that complexes were formed. Where the bindingpartner is not pre-labeled, an indirect label can be used to detectcomplexes anchored on the surface; e.g., using a labeled antibodyspecific for the binding partner (the antibody, in turn, may be directlylabeled or indirectly labeled with a labeled anti-Ig antibody).Depending upon the order of addition of reaction components, testcompounds which inhibit complex formation or which disrupt preformedcomplexes can be detected.

Alternatively, the reaction can be conducted in a liquid phase in thepresence or absence of the test compound, the reaction productsseparated from unreacted components, and complexes detected; e.g., usingan immobilized antibody specific for one binding partner to anchor anycomplexes formed in solution, and a labeled antibody specific for theother binding partner to detect anchored complexes. Again, dependingupon the order of addition of reactants to the liquid phase, testcompounds which inhibit complex or which disrupt preformed complexes canbe identified.

In an alternate embodiment of the invention, a homogeneous assay can beused. In this approach, a preformed complex of the DP107 and DP178peptides is prepared in which one of the binding partners is labeled,but the signal generated by the label is quenched due to complexformation (see, e.g., U.S. Pat. No. 4,109,496 by Rubenstein whichutilizes this approach for immunoassays). The addition of a testsubstance that competes with and displaces one of the binding partnersfrom the preformed complex will result in the generation of a signalabove background. In this way, test substances which disruptDP-107/DP-178 protein-protein interaction can be identified.

In an alternative screening assay, test compounds may be assayed for thetheir ability to disrupt a DP178/DP107 interaction, as measuredimmunometrically using an antibody specifically reactive to aDP107/DP178 complex (i.e., an antibody that recognizes neither DP107 norDP178 individually). Such an assay acts as a competition assay, and isbased on techniques well known to those of skill in the art.

The above competition assay may be described, by way of example, and notby way of limitation, by using the DP178 and M41A178 peptides and byassaying test compounds for the disruption of the complexes formed bythese two peptides by immunometrically visualizing DP178/M41Δ178complexes via the human recombinant Fab, Fab-d, as described, below, inthe Example presented in Section 8. M41Δ178 is a maltose binding fusionprotein containing a gp41 region having its DP178 domain deleted, and isdescribed, below, in the Example presented in Section 8.

Utilizing such an assay, M41Δ178 may be immobilized onto solid supportssuch as microtiter wells. A series of dilutions of a test compound maythen be added to each M41Δ178-containing well in the presence of aconstant concentration of DP-178 peptide. After incubation, at, forexample, room temperature for one hour, unbound DP-178 and test compoundare removed from the wells and wells are then incubated with theDP178/M41Δ178-specific Fab-d antibody. After incubation and washing,unbound Fab-d is removed from the plates and bound Fab-d is quantitated.A no-inhibitor control should also be conducted. Test compounds showingan ability to disrupt DP178/M41A178 complex formation are identified bytheir concentration-dependent decrease in the level of Fab-d binding.

A variation of such an assay may be utilized to perform a rapid,high-throughput binding assay which is capable of directly measuringDP178 binding to M41Δ178 for the determination of binding constants ofthe ligand of inhibitory constants for competitors of DP178 binding.

Such an assay takes advantage of accepted radioligand and receptorbinding principles. (See, for example, Yamamura, H. I. et al., 1985,“Neurotransmitter Receptor Binding”, 2nd ed., Raven Press, NY.) Asabove, M41A178 is immobilized onto a solid support such as a microtiterwell. DP178 binding to M41A178 is then quantitated by measuring thefraction of DP178 that is bound as ¹²⁵I-DP178 and calculating the totalamount bound using a value for specific activity (dpm/μg peptide)determined for each labeled DP178 preparation. Specific binding toM41A178 is defined as the difference of the binding of the labeled DP178preparation in the microtiter wells (totals) and the binding inidentical wells containing, in addition, excess unlabeled DP178(nonspecifics).

5.7. Pharmaceutical Formulations, Dosages and Modes of Administration

The peptides of the invention may be administered using techniques wellknown to those in the art. Preferably, agents are formulated andadministered systemically. Techniques for formulation and administrationmay be found in “Remington's Pharmaceutical Sciences”, 18th ed., 1990,Mack Publishing Co., Easton, Pa. Suitable routes may include oral,rectal, transmucosal, or intestinal administration; parenteral delivery,including intramuscular, subcutaneous, intramedullary injections, aswell as, intrathecal, direct intraventricular, intravenous,intraperitoneal, intranasal, or intraocular injections, just to name afew. For injection, the agents of the invention may be formulated inaqueous solutions, preferably in physiologically compatible buffers suchas Hanks' solution, Ringer's solution, or physiological saline buffer.For such transmucosal administration, penetrants appropriate to thebarrier to be permeated are used in the formulation. Such penetrants aregenerally known in the art.

In instances wherein intracellular administration of the peptides of theinvention or other inhibitory agents is preferred, techniques well knownto those of ordinary skill in the art may be utilized. For example, suchagents may be encapsulated into liposomes, then administered asdescribed above. Liposomes are spherical lipid bilayers with aqueousinteriors. All molecules present in an aqueous solution at the time ofliposome formation are incorporated into the aqueous interior. Theliposomal contents are both protected from the external microenvironmentand, because liposomes fuse with cell membranes, are effectivelydelivered into the cell cytoplasm. Additionally, due to theirhydrophobicity, when small molecules are to be administered, directintracellular administration may be achieved.

Nucleotide sequences encoding the peptides of the invention which are tobe intracellularly administered may be expressed in cells of interest,using techniques well known to those of skill in the art. For example,expression vectors derived from viruses such as retroviruses, vacciniaviruses, adeno-associated viruses, herpes viruses, or bovine papillomaviruses, may be used for delivery and expression of such nucleotidesequences into the targeted cell population. Methods for theconstruction of such vectors and expression constructs are well known.See, for example, Sambrook et al., 1989, Molecular Cloning, A LaboratoryManual, Cold Spring Harbor Press, Cold Spring Harbor N.Y., and Ausubelet al., 1989, Current Protocols in Molecular Biology, Greene PublishingAssociates and Wiley Interscience, NY.

With respect to HIV, peptides of the invention, particularly DP107 andDP178, may be used as therapeutics in the treatment of AIDS. Inaddition, the peptides may be used as prophylacetic measures inpreviously uninfected individuals after acute exposure to an HIV virus.Examples of such prophylacetic use of the peptides may include, but arenot limited to, prevention of virus transmission from mother to infantand other settings where the likelihood of HIV transmission exists, suchas, for example, accidents in health care settings wherein workers areexposed to HIV-containing blood products. The successful use of suchtreatments do not rely upon the generation of a host immune responsedirected against such peptides.

Effective dosages of the peptides of the invention to be administeredmay be determined through procedures well known to those in the artwhich address such parameters as biological half-life, bioavailability,and toxicity. Given the data presented below in Section 6, DP178, forexample, may prove efficacious in vivo at doses required to achievecirculating levels of about 1 to about 10 ng per ml of peptide.

A therapeutically effective dose refers to that amount of the compoundsufficient to result in amelioration of symptoms or a prolongation ofsurvival in a patient. Toxicity and therapeutic efficacy of suchcompounds can be determined by standard pharmaceutical procedures incell cultures or experimental animals, e., for determining the LD₅₀ (thedose lethal to 50% of the population) and the ED₅₀ (the dosetherapeutically effective in 50% of the population). The dose ratiobetween toxic and therapeutic effects is the therapeutic index and itcan be expressed as the ratio LD₅₀/ED₅₀. Compounds which exhibit largetherapeutic indices are preferred. The data obtained from these cellculture assays and animal studies can be used in formulating a range ofdosage for use in humans. The dosage of such compounds lies preferablywithin a range of circulating concentrations that include the ED50 withlittle or no toxicity. The dosage may vary within this range dependingupon the dosage form employed and the route of administration utilized.For any compound used in the method of the invention, thetherapeutically effective dose can be estimated initially from cellculture assays. A dose may be formulated in animal models to achieve acirculating plasma concentration range that includes the IC₅₀ (e.g., theconcentration of the test compound which achieves a half-maximalinhibition of the fusogenic event, such as a half-maximal inhibition ofviral infection relative to the amount of the event in the absence ofthe test compound) as determined in cell culture. Such information canbe used to more accurately determine useful doses in humans. Levels inplasma may be measured, for example, by high performance liquidchromatography (HPLC).

The peptides of the invention may, further, serve the role of aprophylacetic vaccine, wherein the host raises antibodies against thepeptides of the invention, which then serve to neutralize HIV virusesby, for example, inhibiting further HIV infection. Administration of thepeptides of the invention as a prophylacetic vaccine, therefore, wouldcomprise administering to a host a concentration of peptides effectivein raising an immune response which is sufficient to neutralize HIV, by,for example, inhibiting HIV ability to infect cells. The exactconcentration will depend upon the specific peptide to be administered,but may be determined by using standard techniques for assaying thedevelopment of an immune response which are well known to those ofordinary skill in the art. The peptides to be used as vaccines areusually administered intramuscularly.

The peptides may be formulated with a suitable adjuvant in order toenhance the immunological response. Such adjuvants may include, but arenot limited to mineral gels such as aluminum hydroxide; surface activesubstances such as lysolecithin, pluronic polyols, polyanions; otherpeptides; oil emulsions; and potentially useful human adjuvants such asBCG and Corynebacterium parvum. Many methods may be used to introducethe vaccine formulations described here. These methods include but arenot limited to oral, intradermal, intramuscular, intraperitoneal,intravenous, subcutaneous, and intranasal routes.

Alternatively, an effective concentration of polyclonal or monoclonalantibodies raised against the peptides of the invention may beadministered to a host so that no uninfected cells become infected byHIV. The exact concentration of such antibodies will vary according toeach specific antibody preparation, but may be determined using standardtechniques well known to those of ordinary skill in the art.Administration of the antibodies may be accomplished using a variety oftechniques, including, but not limited to those described in thissection.

For all such treatments described above, the exact formulation, route ofadministration and dosage can be chosen by the individual physician inview of the patient's condition. (See e.g. Fingl et al., 1975, in “ThePharmacological Basis of Therapeutics”, Ch. 1 p1).

It should be noted that the attending physician would know how to andwhen to terminate, interrupt, or adjust administration due to toxicity,or to organ dysfunctions. Conversely, the attending physician would alsoknow to adjust treatment to higher levels if the clinical response werenot adequate (precluding toxicity). The magnitude of an administrateddose in the management of the oncogenic disorder of interest will varywith the severity of the condition to be treated and the route ofadministration. The dose and perhaps dose frequency, will also varyaccording to the age, body weight, and response of the individualpatient. A program comparable to that discussed above may be used inveterinary medicine.

Use of pharmaceutically acceptable carriers to formulate the compoundsherein disclosed for the practice of the invention into dosages suitablefor systemic administration is within the scope of the invention. Withproper choice of carrier and suitable manufacturing practice, thecompositions of the present invention, in particular, those formulatedas solutions, may be administered parenterally, such as by intravenousinjection. The compounds can be formulated readily usingpharmaceutically acceptable carriers well known in the art into dosagessuitable for oral administration. Such carriers enable the compounds ofthe invention to be formulated as tablets, pills, capsules, liquids,gels, syrups, slurries, suspensions and the like, for oral ingestion bya patient to be treated.

Pharmaceutical compositions suitable for use in the present inventioninclude compositions wherein the active ingredients are contained in aneffective amount to achieve its intended purpose. Determination of theeffective amounts is well within the capability of those skilled in theart, especially in light of the detailed disclosure provided herein.

In addition to the active ingredients, these pharmaceutical compositionsmay contain suitable pharmaceutically acceptable carriers comprisingexcipients and auxiliaries which facilitate processing of the activecompounds into preparations which can be used pharmaceutically. Thepreparations formulated for oral administration may be in the form oftablets, dragees, capsules, or solutions.

The pharmaceutical compositions of the present invention may bemanufactured in a manner that is itself known, e.g., by means ofconventional mixing, dissolving, granulating, dragee-making, levigating,emulsifying, encapsulating, entrapping or lyophilizing processes.

Pharmaceutical formulations for parenteral administration includeaqueous solutions of the active compounds in water-soluble form.Additionally, suspensions of the active compounds may be prepared asappropriate oily injection suspensions. Suitable lipophilic solvents orvehicles include fatty oils such as sesame oil, or synthetic fatty acidesters, such as ethyl oleate or triglycerides, or liposomes. Aqueousinjection suspensions may contain substances which increase theviscosity of the suspension, such as sodium carboxymethyl cellulose,sorbitol, or dextran. Optionally, the suspension may also containsuitable stabilizers or agents which increase the solubility of thecompounds to allow for the preparation of highly concentrated solutions.

Pharmaceutical preparations for oral use can be obtained by combiningthe active compounds with solid excipient, optionally grinding aresulting mixture, and processing the mixture of granules, after addingsuitable auxiliaries, if desired, to obtain tablets or dragee cores.Suitable excipients are, in particular, fillers such as sugars,including lactose, sucrose, mannitol, or sorbitol; cellulosepreparations such as, for example, maize starch, wheat starch, ricestarch, potato starch, gelatin, gum tragacanth, methyl cellulose,hydroxypropylmethyl-cellulose, sodium carboxymethylcellulose, and/orpolyvinylpyrrolidone (PVP). If desired, disintegrating agents may beadded, such as the cross-linked polyvinyl pyrrolidone, agar, or alginicacid or a salt thereof such as sodium alginate.

Dragee cores are provided with suitable coatings. For this purpose,concentrated sugar solutions may be used, which may optionally containgum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethyleneglycol, and/or titanium dioxide, lacquer solutions, and suitable organicsolvents or solvent mixtures. Dyestuffs or pigments may be added to thetablets or dragee coatings for identification or to characterizedifferent combinations of active compound doses.

Pharmaceutical preparations which can be used orally include push-fitcapsules made of gelatin, as well as soft, sealed capsules made ofgelatin and a plasticizer, such as glycerol or sorbitol. The push-fitcapsules can contain the active ingredients in admixture with fillersuch as lactose, binders such as starches, and/or lubricants such astalc or magnesium stearate and, optionally, stabilizers. In softcapsules, the active compounds may be dissolved or suspended in suitableliquids, such as fatty oils, liquid paraffin, or liquid polyethyleneglycols. In addition, stabilizers may be added.

6. EXAMPLE DP178 (SEQ ID:1) is a Potent Inhibitor of HIV-1 Infection

In this example, DP178 (SEQ ID: 1) is shown to be a potent inhibitor ofHIV-1 mediated CD-4⁺ cell-cell fusion and infection by cell free virus.In the fusion assay, this peptide completely blocks virus inducedsyncytia formation at concentrations of from 1-10 ng/ml. In theinfectivity assay the inhibitory concentration is somewhat higher,blocking infection at 90 ng/ml. It is further shown that DP178 (SEQID:1) shows that the antiviral activity of DP178 (SEQ ID:1) is highlyspecific for HIV-1. Additionally, a synthetic peptide, DP-185 (SEQID:3), representing a HIV-1-derived DP178 homolog is also found to blockHIV-1-mediated syncytia formation.

6.1. Materials and Methods

6.1.1. Peptide Synthesis

Peptides were synthesized using Fast Moc chemistry on an AppliedBiosystems Model 431A peptide synthesizer. Generally, unless otherwisenoted, the peptides contained amidated carboxy termini and acetylatedamino termini. Amidated peptides were prepared using Rink resin(Advanced Chemtech) while peptides containing free carboxy termini weresynthesized on Wang (p-alkoxy-benzyl-alcohol) resin (Bachem). Firstresidues were double coupled to the appropriate resin and subsequentresidues were single coupled. Each coupling step was followed by aceticanhydride capping. Peptides were cleaved from the resin by treatmentwith trifluoracetic acid (TFA) (10 ml), H₂O (0.5 ml), thioanisole (0.5ml), ethanedithiol (0.25 ml), and crystalline phenol (0.75 g).Purification was carried out by reverse phase HPLC. Approximately 50 mgsamples of crude peptide were chromatographed on a Waters Delta Pak C18column (19 mm×30 cm, 15μ spherical) with a linear gradient;H₂O/acetonitrile 0.1% TFA. Lyophilized peptides were stored desiccatedand peptide solutions were made in water at about 1 mg/ml. Electrospraymass spectrometry yielded the following results: DP178 (SEQID:1):4491.87 (calculated 4491.94); DP-180 (SEQ ID:2):4491.45(calculated 4491.94); DP-185 (SEQ ID:3):not done (calculated 4546.97).

6.1.2. Virus

The HIV-1_(LAI) virus was obtained from R. Gallo (Popovic, M. et al.,1984, Science 224:497-508) and propagated in CEM cells cultured in RPMI1640 containing 10% fetal calf serum. Supernatant from the infected CEMcells was passed through a 0.2 μm filter and the infectious titerestimated in a microinfectivity assay using the AA5 cell line to supportvirus replication. For this purpose, 2511 of serial diluted virus wasadded to 75 μl AA5 cells at a concentration of 2×10⁵/ml in a 96-wellmicrotitre plate. Each virus dilution was tested in triplicate. Cellswere cultured for eight days by addition of fresh medium every otherday. On day 8 post infection, supernatant samples were tested for virusreplication as evidenced by reverse transcriptase activity released tothe supernatant. The TCID₅₀ was calculated according to the Reed andMuench formula (Reed, L. J. et al., 1938, Am. J. Hyg. 27:493-497). Thetiter of the HIV-1LAI and HIV-1MN stocks used for these studies, asmeasured on the AA5 cell line, was approximately 1.4×106 and 3.8×104TCID50/ml, respectively.

6.1.3. Cell Fusion Assay

Approximately 7×10⁴ Molt cells were incubated with 1×10⁴ CEM cellschronically infected with the HIV-1LAI virus in 96-well plates (one-halfarea cluster plates; Costar, Cambridge, Mass.) in a final volume of 100μl culture medium as previously described (Matthews, T. J. et al., 1987,Proc. Natl. Acad. Sci. USA 84: 5424-5428). Peptide inhibitors were addedin a volume of 10 μl and the cell mixtures were incubated for 24 hr. at37° C. At that time, multinucleated giant cells were estimated bymicroscopic examination at a 40× magnification which allowedvisualization of the entire well in a single field.

6.1.4. Cell Free Virus Infection Assay

Synthetic peptides were incubated at 37° C. with either 247 TCID₅₀ (forexperiment depicted in FIG. 2), or 62 TCID₅₀ (for experiment depicted inFIG. 3) units of HIV-1_(LAI) virus or 25 TCID₅₀ units of HIV-2_(NIHZ)and CEM CD4+ cells at peptide concentrations of 0, 0.04, 0.4, 4.0, and40 μg/ml for 7 days. The resulting reverse transcriptase (RT) activityin counts per minute was determined using the assay described, below, inSection 6.1.5. See, Reed, L. J. et al., 1938, Am. J. Hyg. 27: 493-497for an explanation of TCID₅₀ calculations.

6.1.5. Reverse Transcriptase Assay

The micro-reverse transcriptase (RT) assay was adapted from Goff et al.(Goff, S. et al., 1981, J. Virol. 38:239-248) and Willey et al. (Willey,R. et al., 1988, J. Virol. 62:139-147). Supernatants from virus/cellcultures are adjusted to 1% Triton-X100. A 10 μl sample of supernatantwas added to 50 μl of RT cocktail in a 96-well U-bottom microtitre plateand the samples incubated at 37° C. for 90 min. The RT cocktailcontained 75 mM KCl, 2 mM dithiothreitol, 5 mM MgCl₂, 5 μg/ml poly A(Pharmacia, cat. No. 27-4110-01), 0.25 units/ml oligo dT (Pharmacia,cat. No. 27-7858-01), 0.05% NP40, 50 mM Tris-HCl, pH 7.8, 0.5 μMnon-radioactive dTTP, and 10 μCi/ml ³²P-dTTP (Amersham, cat. No.PB.10167).

After the incubation period, 40 μl of reaction mixture was applied to aSchleicher and Schuell (S+S) NA45 membrane (or DE81 paper) saturated in2×SSC buffer (0.3M NaCl and 0.003M sodium citrate) held in a S+SMinifold over one sheet of GB003 (S+S) filter paper, with partial vacuumapplied. Each well of the minifold washed four times with 200 μl 2×SSC,under full vacuum. The membrane was removed from the minifold and washed2 more times in a pyrex dish with an excess of 2×SSC. Finally, themembrane was drained on absorbent paper, placed on Whatman #3 paper,covered with Saran wrap, and exposed to film overnight at −70° C.

6.2. Results

6.2.1. Peptide Inhibition of Infected Cell-Induced Syncytia Formation

The initial screen for antiviral activity assayed peptides' ability toblock syncytium formation induced by overnight co-cultivation ofuninfected Molt4 cells with chronically HIV-1 infected CEM cells. Theresults of several such experiments are presented herein. In the firstof these experiments, serial DP178 (SEQ ID: 1) peptide concentrationsbetween 10 μg/ml and 12.5 ng/ml were tested for blockade of the cellfusion process. For these experiments, CEM cells chronically infectedwith either HIV-1_(LAI), HIV-1_(MN), HIV-1_(RF), or HIV-1_(SF2) viruswere cocultivated overnight with uninfected Molt 4 cells. The results(FIG. 4) show that DP178 (SEQ ID: 1) afforded complete protectionagainst each of the HIV-1 isolates down to the lowest concentration ofDP178 (SEQ ID: 1) used. For HIV_(LAI) inhibition, the lowestconcentration tested was 12.5 ng/ml; for all other HIV-1 viruses, thelowest concentration of DP178 (SEQ ID: 1) used in this study was 100ng/ml. A second peptide, DP-180 (SEQ ID:2), containing the same aminoacid residues as DP178 (SEQ ID: 1) but arranged in a random orderexhibited no evidence of anti-fusogenic activity even at the highconcentration of 40 μg/ml (FIG. 4). These observations indicate that theinhibitory effect of DP178 (SEQ ID: 1) is primary sequence-specific andnot related to non-specific peptide/protein interactions. The actualendpoint (i.e., the lowest effective inhibitory concentration) of DP178inhibitory action is within the range of 1-10 ng/ml.

The next series of experiments involved the preparation and testing of aDP178 (SEQ ID:1) homolog for its ability to inhibit HIV-1-inducedsyncytia formation. As shown in FIG. 1, the sequence of DP-185 (SEQID:3) is slightly different from DP178 (SEQ ID:1) in that its primarysequence is taken from the HIV-1_(SF2) isolate and contains severalamino acid differences relative to DP178 (SEQ ID: 1) near the Nterminus. As shown in FIG. 4, DP-185 (SEQ ID:3), exhibits inhibitoryactivity even at 312.5 ng/ml, the lowest concentration tested.

The next series of experiments involved a comparison of DPI 78 (SEQID: 1) HIV-1 and HIV-2 inhibitory activity. As shown in FIG. 5, DP178(SEQ ID:1) blocked HIV-1-mediated syncytia formation at peptideconcentrations below 1 ng/ml. DP178 (SEQ ID: 1) failed, however, toblock HIV-2 mediated syncytia formation at concentrations as high as 10μg/ml. This striking 4 log selectivity of DP178 (SEQ ID:1) as aninhibitor of HIV-1-mediated cell fusion demonstrates an unexpected HIV-1specificity in the action of DP178 (SEQ ID:1). DP178 (SEQ ID:1)inhibition of HIV-1-mediated cell fusion, but the peptide's inability toinhibit HIV-2 medicated cell fusion in the same cell type at theconcentrations tested provides further evidence for the high degree ofselectivity associated with the antiviral action of DP178 (SEQ ID: 1).

6.2.2. Peptide Inhibition of Infection by Cell-Free Virus

DP178 (SEQ ID:1) was next tested for its ability to block CD-4⁺ CEM cellinfection by cell free HIV-1 virus. The results, shown in FIG. 2, arefrom an experiment in which DP178 (SEQ ID: 1) was assayed for itsability to block infection of CEM cells by an HIV-1_(LAI) isolate.Included in the experiment were three control peptides, DP-116 (SEQID:9), DP-125 (SEQ ID:8), and DP-118 (SEQ ID:10). DP-116 (SEQ ID:9)represents a peptide previously shown to be inactive using this assay,and DP-125 (SEQ ID:8; Wild, C. et al., 1992, Proc. Natl. Acad, Sci. USA89:10,537) and DP-118 (SEQ ID: 10) are peptides which have previouslybeen shown to be active in this assay. Each concentration (0, 0.04, 0.4,4, and 40 μg/ml) of peptide was incubated with 247 TCID₅₀ units ofHIV-1_(LAI) virus and CEM cells. After 7 days of culture, cell-freesupernatant was tested for the presence of RT activity as a measure ofsuccessful infection. The results, shown in FIG. 2, demonstrate thatDP178 (SEQ ID:1) inhibited the de novo infection process mediated by theHIV-1 viral isolate at concentrations as low as 90 ng/ml (IC50=90ng/ml). In contrast, the two positive control peptides, DP-125 (SEQ:ID:8) and DP-118 (SEQ ID: 10), had over 60-fold higher IC50concentrations of approximately 5 μg/ml.

In a separate experiment, the HIV-1 and HIV-2 inhibitory action of DP178(SEQ ID:1) was tested with CEM cells and either HIV-1_(LAI) orHIV-2_(NIHZ). 62 TCID₅₀ HIV-1_(LAI) or 25 GCID₅₀ HIV-2_(NIHZ) were usedin these experiments, and were incubated for 7 days. As may be seen inFIG. 3, DP178 (SEQ ID: 1) inhibited HIV-1 infection with an IC50 ofabout 31 ng/ml. In contrast, DP178 (SEQ ID:1) exhibited a much higherIC₅₀ for HIV-2NIHZ, thus making DP178 (SEQ ID: 1) two logs more potentas a HIV-1 inhibitor than a HIV-2 inhibitor. This finding is consistentwith the results of the fusion inhibition assays described, above, inSection 6.2.1, and further supports a significant level of selectivity(i.e., for HIV-1 over HIV-2).

7. EXAMPLE The HIV-1 Inhibitor, DP178 (SEQ ID:1) is Non-Cytotoxic

In this Example, the 36 amino acid synthetic peptide inhibitor DP178(SEQ ID: 1) is shown to be non-cytotoxic to cells in culture, even atthe highest peptide concentrations (40 μg/ml) tested.

7.1. Materials and Methods

Cell proliferation and toxicity assay: Approximately 3.8×10⁵ CEM cellsfor each peptide concentration were incubated for 3 days at 37° C. inT25 flasks. Peptides tested were DP178 (SEQ ID:1) and DP-116 (SEQ ID:9),as described in FIG. 1. Peptides were synthesized as described, above,in Section 6.1. The concentrations of each peptide used were 0, 2.5, 10,and 40 μg/ml. Cell counts were taken at incubation times of 0, 24, 48,and 72 hours.

7.2. Results

Whether the potent HIV-1 inhibitor DP178 (SEQ ID:1) exhibited anycytotoxic effects was assessed by assaying the peptide's effects on theproliferation and viability of cells in culture. CEM cells wereincubated in the presence of varying concentrations of DP178 (SEQ ID:1), and DP-116 (SEQ ID:9), a peptide previously shown to be ineffectiveas a HIV inhibitor (Wild, C. et al., 1992, Proc. Natl. Acad. Sci. USA89:10, 537-10,541). Additionally, cells were incubated in the absence ofeither peptide.

The results of the cytotoxicity study demonstrate that DP178 (SEQ ID: 1)exhibits no cytotoxic effects on cells in culture. As can be seen,below, in Table XXIV, even the proliferation and viabilitycharacteristics of cells cultured for 3 days in the presence of thehighest concentration of DP178 (SEQ ID: 1) tested (40 μg/ml) do notsignificantly differ from the DP-116 (SEQ ID:9) or the no-peptidecontrols. The cell proliferation data is also represented in graphicform in FIG. 6. As was demonstrated in the Working Example presentedabove in Section 6, DP178 (SEQ ID:1) completely inhibits HIV-1 mediatedsyncytia formation at peptide concentrations between 1 and 10 ng/ml, andcompletely inhibits cell-free viral infection at concentrations of atleast 90 ng/ml. Thus, this study demonstrates that even at peptideconcentrations greater than 3 log higher than the HIV inhibitory dose,DP178 (SEQ ID:1) exhibits no cytotoxic effects.

TABLE XXIV % Viability Peptide at time (hours) Peptide Concentrationμg/ml 0 24 48 72 DP178 40 98 97 95 97 (SEQ ID:1) 10 98 97 98 98 2.5 9893 96 96 DP116 40 98 95 98 97 (SEQ ID:9) 10 98 95 93 98 2.5 98 96 98 99No 0 98 97 99 98 Peptide

8. EXAMPLE The Interaction of DP178 and DP107

Soluble recombinant forms of gp41 used in the example described belowprovide evidence that the DP178 peptide associates with a distal site ongp41 whose interactive structure is influenced by the DP107 leucinezipper motif. A single mutation disrupting the coiled-coil structure ofthe leucine zipper domain transformed the soluble recombinant gp41protein from an inactive to an active inhibitor of HIV-1 fusion. Thistransformation may result from liberation of the potent DP178 domainfrom a molecular clasp with the leucine zipper, DP107, determinant. Theresults also indicate that the anti-HIV activity of various gp41derivatives (peptides and recombinant proteins) may be due to theirability to form complexes with viral gp41 and interfere with itsfusogenic process.

8.1. Materials and Methods

8.1.1. Construction of Fusion Proteins and gp41 Mutants

Construction of fusion proteins and mutants shown in FIG. 7 wasaccomplished as follows: the DNA sequence corresponding to theextracellular domain of gp41 (540-686) was cloned into the Xmn I site ofthe expression vector pMal-p2 (New England Biolab) to give M41. The gp41sequence was amplified from pgtat (Malim et al., 1988, Nature 355:181-183) by using polymerase chain reaction (PCR) with upstream primer5′-ATGACGCTGACGGTACAGGCC-3′ (primer A) (SEQ ID NO. 11) and downstreamprimer 5′-TGACTAAGCTTAATACCACAGCCAATTTGTTAT-3′ (primer B) (SEQ ID NO.12). M41-P was constructed by using the T7-Gen in vitro mutagenesis kitfrom United States Biochemicals (USB) following the supplier'sinstructions. The mutagenic primer (5′-GGAGCTGCTTGGGGCCCCAGAC-3′) (SEQID NO. 13) introduces an Ile to Pro mutation in M41 at position 578.M41Δ107, from which the DP-107 region has been deleted, was made using adeletion mutagenic primer 5′-CCAAATCCCCAGGAGCTGCTCGAGCTGCACTATACCAGAC-3′(primer C) (SEQ ID NO. 14) following the USB T7-Gen mutagenesisprotocol. M41A178, from which the DP-178 region has been deleted, wasmade by cloning the DNA fragment corresponding to gp41 amino acids540-642 into the Xmn I site of pMal-p2. Primer A and5′-ATAGCTTCTAGATTAATTGTTAATTTCTCTGTCCC-3′ (primer D) (SEQ ID NO. 15)were used in the PCR with the template pgtat to generate the insertedDNA fragments. M41-P was used as the template with primer A and D in PCRto generate M41-PΔ178. All inserted sequences and mutated residues werechecked by restriction enzyme analysis and confirmed by DNA sequencing.

8.1.2. Purification and Characterization of Fusion Proteins

The fusion proteins were purified according to the protocol described inthe manufacturer's brochure of protein fusion and purification systemsfrom New England Biolabs (NEB). Fusion proteins (10 ng) were analyzed byelectrophoresis on 8% SDS polyacrylamide gels. Western blotting analysiswas performed as described by Sambrook et al., 1989, Molecular Cloning:A Laboratory Manual, 2d Ed, Cold Spring Harbor Laboratory Press, ColdSpring Harbor, N.Y., Ch. 18, pp. 64-75. An HIV-1 positive serum diluted1000-fold, or a human Fab derived from repertoire cloning was used toreact with the fusion proteins. The second antibody was HRP-conjugatedgoat antihuman Fab. An ECL Western blotting detection system (Amersham)was used to detect the bound antibody. A detailed protocol for thisdetection system was provided by the manufacturer. Rainbow molecularweight markers (Amersham) were used to estimate the size of fusionproteins.

8.1.3. Cell Fusion Assays for Anti-HIV Activity

Cell fusion assays were performed as previously described (Matthews etal., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5481). CEM cells (7×10⁴)were incubated with HIV-1_(IIIB) chronically infected CEM cells (10⁴) in96-well flat-bottomed half-area plates (Costar) in 100 μl culturemedium. Peptide and fusion proteins at various concentrations in 10 μlculture medium were incubated with the cell mixtures at 37° C. for 24hours. Multinucleated syncytia were estimated with microscopicexamination. Both M41 and M41-P did not show cytotoxicity at theconcentrations tested and shown in FIG. 8.

Inhibition of HIV-1 induced cell-cell fusion activity was carried out inthe presence of 10 nM DP178 and various concentrations of M41A178 orM41-PΔ178 as indicated in FIG. 9. There was no observable syncytia inthe presence of 10 nM DP178. No peptide or fusion protein was added inthe control samples.

8.1.4. Elisa Analysis of DP178 Binding to the Leucine Zipper Motif ofGP41

The amino acid sequence of DP178 used is:YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF. For enzyme linked immunoassay(ELISA), M41Δ178 or M41-PΔ178 (5 μg/ml) in 0.1M NaHCO₃, pH 8.6, werecoated on 96 wells Linbro ELISA plates (Flow Lab, Inc.) overnight. Eachwell was washed three times with distilled water then blocked with 3%bovine serum albumin (BSA) for 2 hours. After blocking, peptides with0.5% BSA in TBST (40 mM Tris-HCl pH7.5, 150 mM NaCl, 0.05% Tween 20)were added to the ELISA plates and incubated at room temperature for 1hour. After washing three times with TBST, Fab-d was added at aconcentration of 10 ng/ml with 0.5% BSA in TBST. The plates were washedthree times with TBST after incubation at room temperature for 1 hour.Horse radish peroxidase (HRP) conjugated goat antihuman Fab antiserum ata 2000 fold dilution in TBST with 0.5% BSA was added to each well andincubated at room temperature for 45 minutes. The plates were thenwashed four times with TBST. The peroxidase substrate o-phenylenediamine (2.5 mg/ml) and 0.15% H₂O₂ were added to develop the color. Thereaction was stopped with an equal volume of 4.5 N H₂SO₄ afterincubation at room temperature for 10 minutes. The optical density ofthe stopped reaction mixture was measured with a micro plate reader(Molecular Design) at 490 nm. Results are shown in FIG. 10.

8.2. Results

8.2.1. The Expression and Characterization of the Ectodomain of gp41

As a step toward understanding the roles of the two helical regions ingp41 structure and function, the ectodomain of gp41 was expressed as amaltose binding fusion protein (M41) (FIG. 7). The fusogenic peptidesequence at the N-terminal of gp41 was omitted from this recombinantprotein and its derivatives to improve solubility. The maltose bindingprotein facilitated purification of the fusion proteins under relativelymild, non-denaturing conditions. Because the M41 soluble recombinantgp41 was not glycosylated, lacked several regions of the transmembraneprotein (i.e., the fusion peptide, the membrane spanning, and thecytoplasmic domains), and was expressed in the absence of gp120, it wasnot expected to precisely reflect the structure of native gp41 on HIV-1virions. Nevertheless, purified M41 folded in a manner that preservedcertain discontinuous epitopes as evidenced by reactivity with humanmonoclonal antibodies, 98-6, 126-6, and 50-69, previously shown to bindconformational epitopes on native gp41 expressed in eukaryotic cells (Xuet al., 1991, J. Virol. 65: 4832-4838; Chen, 1994, J. Virol.68:2002-2010). Thus, at least certain regions of native gp41 defined bythese antibodies appear to be reproduced in the recombinant fusionprotein M41. Furthermore, M41 reacted with a human recombinant Fab(Fab-d) that recognizes a conformational epitope on gp41 and binds HIV-1virions as well as HIV-1 infected cells but not uninfected cells asanalyzed by FACS. Deletion of either helix motif, i.e., DP107 or DP178,of the M41 fusion protein eliminated reactivity with Fab-d. Theseresults indicate that both helical regions, separated by 60 amino acidsin the primary sequence, are required to maintain the Fab-d epitope.

8.2.2. Anti-HIV Activity of the Recombinant Ectodomain of gp41

The wild type M41 fusion protein was tested for anti-HIV-1 activity. Asexplained, supra, synthetic peptides corresponding to the leucine zipper(DP107) and the C-terminal putative helix (DP178) show potent anti-HIVactivity. Despite inclusion of both these regions, the recombinant M41protein did not affect HIV-1 induced membrane fusion at concentrationsas high as 50 μM (Table XXV, below).

TABLE XXV DISRUPTION OF THE LEUCINE ZIPPER OF GP41 FREES THE ANTI-HIVMOTIF DP107 DP178 M41 M41-P M41-PΔ178 Cell fusion 1 μM  1 nM >50 μM 83nM >50 μM (IC₉₀) Fab-D — — 3.5 × 10⁻⁹ 2.5 × 10⁻⁸ — binding (k_(D)) HIVinfectivity 1 μM 80 nM >16 μM 66 nM  >8 μM (IC₉₀) ¹The affinityconstants of Fab-d binding to the fusion proteins were determined usinga protocol described by B. Friguet et al., 1985, J. Immunol, Method,77:305-319. - = No detectable binding of Fab-d to the fusion proteins.

-   -   Antiviral Infectivity Assays. 20 μl of serially diluted virus        stock was incubated for 60 minutes at ambient temperature with        20 μl of the indicated concentration of purified recombinant        fusion protein in RPMI 1640 containing 10% fetal bovine serum        and antibiotics in a 96-well microtiter plate. 20 μl of CEM4        cells at 6×10⁵ cells/ml were added to each well, and cultures        were incubated at 37° C. in a humidified CO₂ incubator. Cells        were cultured for 9 days by the addition of fresh medium every 2        to 3 days. On days 5, 7, and 9 postinfection, supernatant        samples were assayed for reverse transcriptase (RT) activity, as        described below, to monitor viral replication. The 50% tissue        culture infectious dose (TCID₅₀) was calculated for each        condition according to the formula of Reed & Muench, 1937,        Am. J. Hyg. 27:493-497. RT activity was determined by a        modification of the published methods of Goff et al., 1981, J.        Virol. 38:239-248 and Willey et al., 1988, J. Virol. 62:139-147        as described in Chen et al., 1993, AIDS Res. Human Retroviruses        9:1079-1086.

Surprisingly, a single amino acid substitution, proline in place ofisoleucine in the middle of the leucine zipper motif, yielded a fusionprotein (M41-P) which did exhibit antiviral activity (Table XXV and FIG.8). As seen in Table XXV, M41-P blocked syncytia formation by 90% atapproximately 85 nM and neutralized HIV-1_(IIIB) infection by 90% atapproximately 70 nM concentrations. The anti-HIV-1 activity of M41-Pappeared to be mediated by the C-terminal helical sequence sincedeletion of that region from M41-P yielded an inactive fusion protein,M41-PΔ178 (Table XXV). This interpretation was reinforced by experimentsdemonstrating that a truncated fusion protein lacking the DP178sequence, M41Δ178, abrogated the potent anti-fusion activity of theDP178 peptide in a concentration-dependent manner (FIG. 9). The sametruncated fusion protein containing the proline mutation disrupting theleucine zipper, M41-PΔ178, was not active in similar competitionexperiments (FIG. 9). The results indicate that the DP178 peptideassociates with a second site on gp41 whose interactive structure isdependent on a wild type leucine zipper sequence. A similar interactionmay occur within the wild type fusion protein, M41, and act to form anintramolecular clasp which sequesters the DP178 region, making itunavailable for anti-viral activity.

A specific association between these two domains is also indicated byother human monoclonal Fab-d studies. For example, Fab-d failed to bindeither the DP178 peptide or the fusion protein M41Δ178, but its epitopewas reconstituted by simply mixing these two reagents together (FIG.10). Again, the proline mutation in the leucine zipper domain of thefusion protein, M41-PΔ178, failed to reconstitute the epitope in similarmixing experiments.

9. EXAMPLE Method for Computer-Assisted Identification of DP107-Like andDP178-Like Sequences

A number of known coiled-coil sequences have been well described in theliterature and contain heptad repeat positioning for each amino acid.Coiled-coil nomenclature labels each of seven amino acids of a heptadrepeat A through G, with amino acids A and D tending to be hydrophobicpositions. Amino acids E and G tend to be charged. These four positions(A, D, E, and G) form the amphipathic backbone structure of a monomericalpha-helix. The backbones of two or more amphipathic helices interactwith each other to form di-, tri-, tetrameric, etc., coiled-coilstructures. In order to begin to design computer search motifs, a seriesof well characterized coiled coils were chosen including yeasttranscription factor GCN4, Influenza Virus hemagglutinin loop 36, andhuman proto-oncogenes c-Myc, c-Fos, and c-Jun. For each peptidesequence, a strict homology for the A and D positions, and a list of theamino acids which could be excluded for the B, C, E, F, and G positions(because they are not observed in these positions) was determined.Motifs were tailored to the DP107 and DP178 sequences by deducing themost likely possibilities for heptad positioning of the amino acids ofHIV-1 Bru DP-107, which is known to have coiled-coil structure, andHIV-1 Bru DP178, which is still structurally undefined. The analysis ofeach of the sequences is contained in FIG. 12. For example, the motiffor GCN4 was designed as follows:

-   1. The only amino acids (using standard single letter amino acid    codes) found in the A or D positions of GCN4 were [LMNV].-   2. All amino acids were found at B, C, E, F, and G positions except    {CFGIMPTW}.-   3. The PESEARCH motif would, therefore, be written as follows:

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)

Translating or reading the motif: “at the first A position either L, M,N, or V must occur; at positions B and C (the next two positions) accepteverything except C, F, G, I, M, P, T, or W; at the D position either L,M, N, or V must occur; at positions E, F, and G (the next 3 positions)accept everything except C, F, G, I, M, P, T, or W.” This statement iscontained four times in a 28-mer motif and five times in a 35-mer motif.The basic motif key then would be: [LMNV]-{CFGIMPTW}. The motif keys forthe remaining well described coiled-coil sequences are summarized inFIG. 12.

The motif design for DP107 and DP178 was slightly different than the28-mer model sequences described above due to the fact that heptadrepeat positions are not defined and the peptides are both longer than28 residues. FIG. 13 illustrates several possible sequence alignmentsfor both DP107 and DP178 and also includes motif designs based on28-mer, 35-mer, and full-length peptides. Notice that only slightdifferences occur in the motifs as the peptides are lengthened.Generally, lengthening the base peptide results in a less stringentmotif. This is very useful in broadening the possibilities foridentifying DP107- or DP-178-like primary amino acid sequences referredto in this document as “hits”.

In addition to making highly specific motifs for each type peptidesequence to be searched, it is also possible to make “hybrid” motifs.These motifs are made by “crossing” two or more very stringent motifs tomake a new search algorithm which will find not only both “parent” motifsequences but also any peptide sequences which have similarities to one,the other, or both “parents”. For example, in FIG. 14 the “parent”sequence of GCN4 is crossed with each of the possible “parent” motifs ofDP-107. Now the hybrid motif must contain all of the amino acids foundin the A and D positions of both parents, and exclude all of the aminoacids not found in either parent at the other positions. The resultinghybrid from crossing GCN4 or [LMNV]{CFGIMPTW} and DP107 (28-mer with thefirst L in the D position) or [ILQT]{CDFIMPST}, is [ILMNQTV]{CFIMPT}.Notice that now only two basic hybrid motifs exist which cover bothframing possibilities, as well as all peptide lengths of the parentDP-107 molecule. FIG. 15 represents the “hybridizations” of GCN4 withDP-178. FIG. 16 represents the “hybridizations” of DP107 and DP178. Itis important to keep in mind that the represented motifs, both parentand hybrid, are motif keys and not the depiction of the full-lengthmotif needed to actually do the computer search.

Hybridizations can be performed on any combination of two or moremotifs. FIG. 17 summarizes several three-motif hybridizations includingGCN4, DP107 (both frames), and DP178 (also both frames). Notice that theresulting motifs are now becoming much more similar to each other. Infact, the first and third hybrid motifs are actually subsets of thesecond and fourth hybrid motifs respectively. This means that the firstand third hybrid motifs are slightly more stringent than the second andfourth. It should also be noted that with only minor changes in thesefour motifs, or by hybridizing them, a single motif could be obtainedwhich would find all of the sequences. However, it should be rememberedthat stringency is also reduced. Finally, the most broad-spectrum andleast-stringent hybrid motif is described in FIG. 18 which summarizesthe hybridization of GCN4, DP107 (both frames), DP178 (both frames),c-Fos, c-Jun, c-Myc, and Flu loop 36.

A special set of motifs was designed based on the fact that DP-178 islocated only approximately ten amino acids upstream of the transmembranespanning region of gp41 and just C-terminal to a proline which separatesDP107 and DP178. It has been postulated that DP178 may be an amphipathichelix when membrane associated, and that the proline might aid in theinitiation of the helix formation. The same arrangement was observed inRespiratory Syncytial Virus; however, the DP178-like region in thisvirus also had a leucine zipper just C-terminal to the proline.Therefore, N-terminal proline-leucine zipper motifs were designed toanalyze whether any other viruses might contain this same pattern. Themotifs are summarized in FIG. 19.

The PC/Gene protein database contains 5879 viral amino acid sequences(library file PVIRUSES; CD-ROM release 11.0). Of these, 1092 are viralenveloped or glycoprotein sequences (library file PVIRUSE1). Tables Vthrough XIV contain lists of protein sequence names and motif hitlocations for all the motifs searched.

10. EXAMPLE Computer-Assisted Identification of DP107 and DP178-LikeSequences in Human Immunodeficiency Virus

FIG. 20 represents search results for HIV-1 BRU isolate gp41 (PC/Geneprotein sequence PENV_HV1BR). Notice that the hybrid motif which crossesDP-107 and DP-178 (named 107×178×4; the same motif as found in FIG. 16found three hits including amino acids 550-599, 636-688, and 796-823.These areas include DP-107 plus eight N-terminal and four C-terminalamino acids; DP178 plus seven N-terminal and ten C-terminal amino acids;and an area inside the transmembrane region (cytoplasmic). FIG. 20 alsocontains the results obtained from searching with the motif namedALLMOTI5, for which the key is found in FIG. 17 ({CDGHP} {CFP}×5). Thismotif also found three hits including DP107 (amino acids 510-599), DP178(615-717), and a cytoplasmic region (772-841). These hits overlap thehits found by the motif 107×178×4 with considerable additional sequenceson both the amino and carboxy termini. This is not surprising in that107×178×4 is a subset of the ALLMOTI5 hybrid motif. Importantly, eventhough the stringency of ALLMOTI5 is considerably less than 107×178×4,it still selectively identifies the DP107 and DP178 regions of gp41shown to contain sequences for inhibitory peptides of HIV-1. The resultsof these two motif searches are summarized in Table V under the PC/Geneprotein sequence name PENV_HV1BR. The proline-leucine zipper motifs alsogave several hits in HIV-1 BRU including 503-525 which is at the veryC-terminus of gp120, just upstream of the cleavage site (P7LZIPC andP12LZIPC); and 735-768 in the cytoplasmic domain of gp41 (P23LZIPC).These results are found in Tables VIII, IX, and X under the samesequence name as mentioned above. Notice that the only area of HIV-1 BRUwhich is predicted by the Lupas algorithm to contain a coiled-coilregion, is from amino acids 635-670. This begins eight amino acidsN-terminal to the start and ends eight amino acids N-terminal to the endof DP178. DP107, despite the fact that it is a known coiled coil, is notpredicted to contain a coiled-coil region using the Lupas method.

11. EXAMPLE Computer-Assisted Identification of DP107-Like andDP178-Like Sequences in Human Respiratory Syncytial Virus

FIG. 21 represents search results for Human Respiratory Syncytial Virus(RSV; Strain A2) fusion glycoprotein F1 (PC/Gene protein sequence namePVGLF_HRSVA). Motif 107×178×4 finds three hits including amino acids152-202, 213-243, and 488-515. The arrangement of these hits is similarto what is found in HIV-1 except that the motif finds two regions withsimilarities to DP-178, one just downstream of what would be called theDP107 region or amino acids 213-243, and one just upstream of thetransmembrane region (also similar to DP178) or amino acids 488-515.Motif ALLMOTI5 also finds three areas including amino acids 116-202,267-302, and 506-549. The proline-leucine zipper motifs also gaveseveral hits including amino acids 205-221 and 265-287 (P1LZIPC 265-280,P12LZIPC), and 484-513 (P7LZIPC and P12LZIPC 484-506, P23LZIPC). Noticethat the PLZIP motifs also identify regions which share locationsimilarities with DP-178 of HIV-1.

12. EXAMPLE Computer-Assisted Identification of DP107-Like andDP178-Like Sequences in Simian Immunodeficiency Virus

Motif hits for Simian immunodeficiency Virus gp41 (AGM3 isolate; PC/Geneprotein sequence name PENV_SIVAG) are shown in FIG. 22. Motif 107×178×4finds three hits including amino acids 566-593, 597-624, and 703-730.The first two hits only have three amino acids between them and couldprobably be combined into one hit from 566-624 which would represent aDP107-like hit. Amino acids 703 to 730 would then represent a DP178-likehit. ALLMOTI5 also finds three hits including amino acids 556-628(DP107-like), 651-699 (DP178-like), and 808-852 which represents thetransmembrane spanning region. SIV also has one region from 655-692 witha high propensity to form a coiled coil as predicted by the Lupasalgorithm. Both 107×178×4 and ALLMOTI5 motifs find the same region. SIVdoes not have any PLZIP motif hits in gp41.

The identification of DP178/DP107 analogs for a second SIV isolate(MM251) is demonstrated in the Example presented, below, in Section 19.

13. EXAMPLE Computer-Assisted Identification of DP107-Like and DP178Like Sequences in Canine Distemper Virus

Canine Distemper Virus (strain Onderstepoort) fusion glycoprotein F1(PC/Gene Protein sequence name PVGLF_CDVO) has regions similar to HumanRSV which are predicted to be DP107-like and DP178-like (FIG. 23). Motif107×178×4 highlights one area just C-terminal to the fusion peptide atamino acids 252-293. Amino acids 252-286 are also predicted to be coiledcoil using the Lupas algorithm. Almost 100 amino acids C-terminal to thefirst region is a DP178-like area at residues 340-367. ALLMOTI5highlights three areas of interest including: amino acids 228-297, whichcompletely overlaps both the Lupas prediction and the DP107-like107×178×4 hit; residues 340-381, which overlaps the second 107×178×4hit; and amino acids 568-602, which is DP178-like in that it is locatedjust N-terminal to the transmembrane region. It also overlaps anotherregion (residues 570-602) predicted by the Lupas method to have a highpropensity to form a coiled coil. Several PLZIP motifs successfullyidentified areas of interest including P6 and P12LZIPC which highlightresidues 336-357 and 336-361 respectively; P1 and P12LZIPC which findresidues 398-414; and P12 and P23LZIPC which find residues 562-589 and562-592 respectively.

14. EXAMPLE Computer-Assisted Identification of DP107-Like andDP178-Like Sequences in Newcastle Disease Virus

FIG. 24 shows the motif hits found in Newcastle Disease Virus (strainAustralia-Victoria/32; PC Gene protein sequence name PVGLF_NDVA). Motif107×178×4 finds two areas including a DP107-like hit at amino acids151-178 and a DP178-like hit at residues 426-512. ALLMOTI5 finds threeareas including residues 117-182, 231-272, and 426-512. The hits from426-512 include a region which is predicted by the Lupas method to havea high coiled-coil propensity (460-503). The PLZIP motifs identify onlyone region of interest at amino acids 273-289 (P1 and 12LZIPC).

15. EXAMPLE Computer-Assisted Identification of DP107-Like andDP178-Like Sequences in Human Parainfluenza Virus

Both motifs 107×178×4 and ALLMOTI5 exhibit DP107-like hits in the sameregion, 115-182 and 117-182 respectively, of Human Parainfluenza Virus(strain NIH 47885; PC/Gene protein sequence name PVGLF_p13H4; (FIG. 25).In addition, the two motifs have a DP178-like hit just slightlyC-terminal at amino acids 207-241. Both motifs also have DP178-like hitsnearer the transmembrane region including amino acids 457-497 and462-512 respectively. Several PLZIP motif hits are also observedincluding 283-303 (P5LZIPC), 283-310 (P12LZIPC), 453-474 (P6LZIPC), and453-481 (P23LZIPC). The Lupas algorithm predicts that amino acids122-176 may have a propensity to form a coiled-coil.

16. EXAMPLE Computer-Assisted Identification of DP107-Like andDP178-Like Sequences of Influenza A Virus

FIG. 26 illustrates the Lupas prediction for a coiled coil in InfluenzaA Virus (strain A/Aichi/2/68) at residues 379-436, as well as the motifhits for 107×178×4 at amino acids 387-453, and for ALLMOTI5 at residues380-456. Residues 383-471 (38-125 of HA2) were shown by Carr and Kim tobe an extended coiled coil when under acidic pH (Carr and Kim, 1993,Cell 73: 823-832). The Lupas algorithm predicts a coiled-coil atresidues 379-436. All three methods successfully predicted the regionshown to actually have coiled-coil structure; however, ALLMOTI5predicted the greatest portion of the 88 residue stretch.

17. EXAMPLE Potential Respiratory Syncytial Virus DP178/DP107 Analogs:CD and Antiviral Characterization

In the Example presented herein, respiratory syncytial virus (RSV)peptides identified by utilizing the computer-assisted search motifsdescribed in the Examples presented in Sections 9 and 11, above, weretested for anti-RSV activity. Additionally, circular dichroism (CD)structural analyses were conducted on the peptides, as discussed below.It is demonstrated that several of the identified peptides exhibitpotent antiviral capability. Additionally, it is shown that several ofthese peptides exhibit a substantial helical character.

17.1. Materials and Methods

Structural analyses: The CD spectra were measured in a 10 mM sodiumphosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mMconcentrations, using a 1 cm pathlength cell on a Jobin/YvonAutodichrograph Mark V CD spectrophotometer. Peptides were synthesizedaccording to the methods described, above, in Section 6.1. Peptideconcentrations were determined from A280 using Edlehoch's method (1967,Biochemistry 6:1948).

Anti-RSV antiviral activity assays: The assay utilized herein tested theability of the peptides to disrupt the ability of HEp2 cells acutelyinfected with RSV (i.e., cells which are infected with a multiplicity ofinfection of greater than 2) to fuse and cause syncytial formation on amonolayer of uninfected an uninfected line of Hep-2 cells. The lower theobserved level of fusion, the greater the antiviral activity of thepeptide was determined to be.

Uninfected confluent monolayers of Hep-2 cells were grown in microtiterwells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [BioWhittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which hadbeen heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No.14-501F) supplemented at 3%, antibiotics (penicillin/streptomycin; BioWhittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures ofacutely infected Hep2 cells were washed with DPBS (Dulbecco's PhosphateBuffered Saline w/o calcium or magnesium; Bio Whittaker Cat. No.17-512F) and cell monolayers were removed with Versene (1:5000; GibcoLife Technologies Cat. No. 15040-017). The cells were spun 10 minutesand resuspended in 3% FBS. Cell counts were performed using ahemacytometer. Persistent cells were added to the uninfected Hep-2cells.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected Hep-2 cells, then adding peptides (at thedilutions described below) in 3% EMEM, and 100 acutely RSV-infected Hep2cells per well. Wells were then incubated at 37° C. for 48 hours.

After incubation, cells in control wells were checked for fusioncenters, media was removed from the wells, followed by addition, to eachwell, of either Crystal Violet stain or XTT. With respect to CrystalViolet, approximately 50 μl 0.25% Crystal Violet stain in methanol wereadded to each well. The wells were rinsed immediately, to remove excessstain, and were allowed to dry. The number of syncytia per well werethen counted, using a dissecting microscope.

With respect to XTT(2,3-bis[2-Methoxy-4-nitro-5-sulfophenyl]-2H-tetrazolium-5-carboxyanilideinner salt), 50 μl XTT (1 mg/ml in RPMI buffered with 100 mM HEPES, pH7.2-7.4, plus 5% DMSO) were added to each well. The OD_(450/690) wasmeasured (after blanking against growth medium without cells orreagents, and against reagents) according to standard procedures.

Peptides: The peptides characterized in the study presented herein were:

1) peptides T-142 to T-155 and T-575, as shown in FIGS. 27A-B, andpeptides T-22 to T-27, T-68, T-334 and T-371 to T-375 and T-575, asshown in FIG. 27C;

2) peptides T-120 to T-141 and T-576, as shown in FIG. 27C, and peptidesT-12, T-13, T-15, T-19, T-28 to T-30, T-66, T-69, T-70 and T-576, asshown in FIG. 27E; and

3) peptides T-67 and T-104 to T-119 and T-384, as shown in FIGS. 28A-B,and peptides T-71, T-613 to T-617, T-662 to T-676 and T-730, as shown inFIG. 28C.

The peptides of group 1 represent portions of the RSV F2 proteinDP178/107-like region. The peptides of group 2 represent portions of theRSV F1 protein DP107-like region. The peptides of groups 3 representportions of the RSV F1 protein DP178-like region.

Each peptide was tested at 2-fold serial dilutions ranging from 100μg/ml to approximately 100 ng/ml. For each of the assays, a wellcontaining no peptide was also used. The IC₅₀ data for each peptiderepresents the average of several experiments conducted utilizing thatpeptide.

17.2. Results

The data summarized in FIGS. 27A-C and 28A-C represent antiviral andstructural information obtained from peptides derived from the RSV F2DP178/DP107-like F2 region (FIGS. 27A-C), the RSV F1 DP-107-like region(FIGS. 27D-F) and the RSV DP178-like F2 region (FIGS. 28A-C).

As shown in FIGS. 27A-F, a number of the RSV DP178/DP107-like peptidesexhibited a detectable level of antiviral activity. Peptides from theRSV DP178/DP107-like F2 region (FIGS. 27A-C), for example, T-142 toT-145 and T-334 purified peptides, exhibited detectable levels ofantiviral activity, as evidenced by their IC₅₀ values. Further, a numberof RSV F1 DP107-like peptides (FIGS. 27D-F) exhibited a sizable level ofantiviral activity as purified peptides, including, for example,peptides T-124 to T-127, T-131, T-135 and T-137 to T-139, asdemonstrated by their low IC₅₀ values. In addition, CD analysis FIG.27A-B, 27D-E) reveals that many of the peptides exhibit some detectablelevel of helical structure.

The results summarized in FIGS. 28A-C demonstrate that a number ofDP178-like purified peptides exhibit a range of potent anti-viralactivity. These peptides include, for example, T-67, T-104, T-105 andT-107 to T-119, as listed in FIGS. 28A-B, and T-665 to T-669 and T-671to T-673, as listed in FIG. 28C. In addition, some of the DP178-likepeptides exhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove,successfully identified viral peptide domains that represent highlypromising anti-RSV antiviral compounds.

18. EXAMPLE Potential Human Parainfluenza Virus Type 3 DP178/DP107Analogs: CD and Antiviral Characterization

In the Example presented herein, human parainfluenza virus type 3(HPIV3) peptides identified by utilizing the computer-assisted searchmotifs described in the Examples presented in Sections 9 and 15, above,were tested for anti-HPIV3 activity. Additionally, circular dichroism(CD) structural analyses were conducted on the peptides, as discussedbelow. It is demonstrated that several of the identified peptidesexhibit potent antiviral capability. Additionally, it is shown thatseveral of these peptides exhibit a substantial helical character.

18.1. Materials and Methods

Structural analyses: Structural analyses consisted of circular dichroism(CD) studies. The CD spectra were measured in a 10 mM sodium phosphate,150 mM sodium chloride, pH 7.0, buffer at approximately 10 mMconcentrations, using a 1 cm pathlength cell on a Jobin/YvonAutodichrograph Mark V CD spectrophotometer. Peptide concentrations weredetermined from A280 using Edlehoch's method (1967, Biochemistry6:1948).

Anti-HPIV3 antiviral activity assays: The assay utilized herein testedthe ability of the peptides to disrupt the ability of Hep2 cellschronically infected with HPIV3 to fuse and cause syncytial formation ona monolayer of an uninfected line of CV-1W cells. The more potent thelower the observed level of fusion, the greater the antiviral activityof the peptide.

Uninfected confluent monolayers of CV-1W cells were grown in microtiterwells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [BioWhittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which hadbeen heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No.14-501F) supplemented at 3%, antibiotics/antimycotics (Gibco BRL LifeTechnologies Cat. No. 15040-017) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures ofchronically infected Hep2 cells were washed with DPBS (Dulbecco'sPhosphate Buffered Saline w/o calcium or magnesium; Bio Whittaker Cat.No. 17-512F) and cell monolayers were removed with Versene (1:5000;Gibco Life Technologies Cat. No. 15040-017). The cells were spun 10minutes and resuspended in 3% FBS. Cell counts were performed using ahemacytometer. Persistent cells were added to the uninfected CV-1Wcells.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected CV-1W cells, then adding peptides (at thedilutions described below) in 3% EMEM, and 500 chronicallyHPIV3-infected Hep2 cells per well. Wells were then incubated at 37° C.for 24 hours.

On day 2, after cells in control wells were checked for fusion centers,media was removed from the wells, followed by addition, to each well, ofapproximately 50 μl 0.25% Crystal Violet stain in methanol. Wells wererinsed immediately, to remove excess stain and were then allowed to dry.The number of syncytia per well were then counted, using a dissectingmicroscope.

Alternatively, instead of Crystal Violet analysis, cells were assayedwith XTT, as described, above, in Section 17.1.

Peptides: The peptides characterized in the study presented herein were:

-   1) Peptides 157 to 188, as shown in FIGS. 29A-C, and peptides T-38    to T-40, T-42 to T-46 and T-582, as shown in FIGS. 29D-E. These    peptides are derived from the DP107 region of the HPIV3 F1 fusion    protein (represented by HPF3 107, as shown in FIGS. 29A-C); and-   2) Peptides 189 to 210, as shown in FIGS. 30A-B, and T-269, T-626,    T-383 and T-577 to T-579, as shown in FIG. 30C. These peptides are    primarily derived from the DP178 region of the HPIV3 F1 fusion    protein (represented by HPF3 178, as shown in FIGS. 30A-B). Peptide    T-626 contains two mutated amino acid resides (represented by a    shaded background). Additionally, peptide T-577 represents F1 amino    acids 65-100, T-578 represents F1 amino acids 207-242 and T-579    represents F1 amino acids 273-309.

Each peptide was tested at 2-fold serial dilutions ranging from 500μg/ml to approximately 500 ng/ml. For each of the assays, a wellcontaining no peptide was also used.

18.2. Results

The data summarized in FIGS. 29A-E and 30A-C represent antiviral andstructural information obtained from peptides derived from the HPIV3fusion protein DP107-like region (FIGS. 29A-E) and the HPIV3 fusionprotein DP178-like region (FIGS. 30A-C).

As shown in FIGS. 29A-E, a number of the HPIV3 DP107-like peptidesexhibited potent levels of antiviral activity. These peptides include,for example, peptides T-40, T-172 to T-175, T-178, T-184 and T-185.

CD analysis reveals that a number of the peptides exhibit detectable tosubstantial level of helical structure.

The results summarized in FIGS. 30A-C demonstrate that a number of theDP178-like peptides tested exhibit a range of anti-viral activity. Thesepeptides include, for example, peptides 194 to 211, as evidenced bytheir low IC₅₀ values. In fact, peptides 201 to 205 exhibit IC₅₀ valuesin the nanogram/ml range. In addition, many of the DP178-like peptidesexhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove, havesuccessfully identified viral peptide domains that represent highlypromising anti-HPIV3 antiviral compounds.

19. EXAMPLE Computer-Assisted Identification of DP178/DP107 Analogs inSimian Immunodeficiency Virus

FIG. 31 represents search results for SW isolate MM251 (PC/Gene® proteinsequence PENV_SIVM2). Both 107×178×4 and ALLMOTI5 search motifsidentified two regions with similarities to DP107 and/or DP178.

The peptide regions found by 107×178×4 were located at amino acidresidues 156-215 and 277-289. The peptide regions found by ALLMOTI5 werelocated at amino acid residues 156-219 and 245-286. Both motifs,therefore, identify similar regions.

Interestingly, the first SIV peptide region (i.e., from amino acidresidue 156 to approximately amino acid residue 219) correlates with aDP107 region, while the second region identified (i.e., fromapproximately amino acid residue 245 to approximately amino acid residue289) correlates with the DP178 region of HIV. In fact, an alignment ofSIV isolate MM251 and HIV isolate BRU, followed by a selection of thebest peptide matches for HIV DP107 and DP178, reveals that the bestmatches are found within the peptide regions identified by the 107×178×4and ALLMOTI5 search motifs.

It should be noted that a potential coiled-coil region at amino acidresidues 242-282 is predicted by the Lupas program. This is similar tothe observation in HIV in which the coiled-coil is predicted by theLupas program to be in the DP178 rather than in the DP107 region. It ispossible, therefore, that SIV may be similar to HIV in that it maycontain a coiled-coil structure in the DP107 region, despite such astructure being missed by the Lupas algorithm. Likewise, it may be thatthe region corresponding to a DP178 analog in SIV may exhibit anundefined structure, despite the Lupas program's prediction of acoiled-coil structure.

20. EXAMPLE Computer-Assisted Identification of DP178/DP107 Analogs inEpstein-Barr Virus

The results presented herein describe the identification of DP178/DP107analogs within two different Epstein-Barr Virus proteins. Epstein-Barris a human herpes virus which is the causative agent of, for example,infectious mononucleosis (IM), and is also associated withnasopharyngeal carcinomas (NPC), Burkitt's lymphoma and other diseases.The virus predominantly exists in the latent form and is activated by avariety of stimuli.

FIG. 32 depicts the search motif results for the Epstein-Barr Virus(Strain B95-8; PC/Gene® protein sequence PVGLB_EBV) glycoprotein gp110precursor (gp115). The 107×178×4 motif identified two regions ofinterest, namely the regions covered by amino acid residues 95-122 and631-658. One PZIP region was identified at amino acid residue 732-752which is most likely a cytoplasmic region of the protein. The Lupasalgorithm predicts a coiled-coil structure for amino acids 657-684. NoALLMOTI5 regions were identified.

FIG. 33 depicts the search motif results for the Zebra (or EB1)trans-activator protein (BZLF1) of the above-identified Epstein-Barrvirus. This protein is a transcription factor which represents theprimary mediator of viral reactivation. It is a member of the b-ZIPfamily of transcription factors and shares significant homology with thebasic DNA-binding and dimerization domains of the cellular oncogenesc-fos and C/EBP. The Zebra protein functions as a homodimer.

Search results demonstrate that the Zebra protein exhibits a singleregion which is predicted to be either of DP107 or DP178 similarity, andis found between the known DNA binding and dimerization regions of theprotein. Specifically, this region is located at amino acid residues193-220, as shown in FIG. 33. The Lupas program predicted no coiled-coilregions.

21. EXAMPLE Computer-Assisted Identification of DP178/DP107 Analogs inMeasles Virus

FIG. 34 illustrates the motif search results for the fusion protein F1of measles virus, strain Edmonston (PC Gene® protein sequencePVGLF_MEASE), successfully identifying DP178/DP107 analogs.

The 107×178×4 motif identifies a single region at amino acid residues228-262. The ALLMOTI5 search motif identifies three regions, includingamino acid residues 116-184, 228-269 and 452-500. Three regionscontaining proline residues followed by a leucine zipper-like sequencewere found beginning at proline residues 214, 286 and 451.

The Lupas program identified two regions it predicted had potential forcoiled-coil structure, which include amino acid residues 141-172 and444-483.

22. EXAMPLE Computer-Assisted Identification of DP178/DP107 Analogs inHepatitis B Virus

FIG. 35 depicts the results of a PZIP motif search conducted on theHepatitis B virus subtype AYW. Two regions of interest within the majorsurface antigen precursor S protein were identified. The first lies justC-terminal to the proposed fusion peptide of the major surface antigen(Hbs) which is found at amino acid residues 174-191. The second regionis located at amino acid residues 233-267. The Lupas program predicts nocoiled-coil repeat regions.

In order to test the potential anti-HBV antiviral activity of theseD178/DP107 analog regions, peptides derived from area around the analogregions are synthesized, as shown in FIGS. 52A-B. These peptidesrepresent one amino acid peptide “walks” through the putativeDP178/DP107 analog regions. The peptides are synthesized according tostandard Fmoc chemistry on Rinkamide MBHA resins to provide for carboxyterminal blockade (Chang, C. D. and Meinhofer, J., 1978, Int. J. Pept.Protein Res. 11:246-249; Fields, G.B. and Noble, R. L., 1990, Int. J.Pept. Protein Res. 35:161-214). Following complete synthesis, thepeptide amino-terminus is blocked through automated acetylation and thepeptide is cleaved with trifluoroacetic acid (TFA) and the appropriatescavengers (King, D. S. et al., 1990, Int. J. Pept. Res. 36:255-266).After cleavage, the peptide is precipitated with ether and dried undervacuum for 24 hours.

The anti-HBV activity of the peptides is tested by utilizing standardassays to determine the test peptide concentration required to cause anacceptable (e.g., 90%) decrease in the amount of viral progeny formed bycells exposed to an HBV viral inoculum. Candidate antivial peptides arefurther characterized in model systems such as wood chuck tissue cultureand animal systems, prior to testing on humans.

23. EXAMPLE Computer-Assisted Identification of DP178/DP107 Analogs inSimian Mason-Pfizer Monkey Virus

The results depicted herein illustrate the results of search motifsconducted on the Simian Mason-Pfizer monkey virus. The motifs revealDP178/DP107 analogs within the enveloped (TM) protein GP20, as shown inFIG. 36.

The 107×178×4 motifs identifies a region at amino acid residues 422-470.The ALLMOTI5 finds a region at amino acid residues 408-474. The Lupasprogram predicted a coiled-coil structure a amino acids 424-459.

24. EXAMPLE Computer-Assisted Identification of DP178/DP107 Analogs inBacterial Proteins

The results presented herein demonstrate the identification ofDP178/DP107 analogs corresponding to sequences present in proteins of avariety of bacterial species.

FIG. 37 depicts the search motif results for the Pseudomonas aeruginosafimbrial protein (Pilin). Two regions were identified by motifs107×178×4 and ALLMOTI5. The regions located at amino acid residues 30-67and 80-144 were identified by the 107×178×4 motif. The regions at aminoacid residues 30-68 and 80-125 were identified by the ALLMOTI5.

FIG. 38 depicts the search motif results for the Pseudomonas gonorrhoeaefimbrial protein (Pilin). A single region was identified by both the107×178×4 and the ALLMOTI5 motifs. The region located at amino acidresidues 66-97 was identified by the 107×178×4 motif. The region locatedat amino acid residues 66-125 were identified by the ALLMOTI5 searchmotif. No coiled-coil regions were predicted by the Lupas program.

FIG. 39 depicts the search motif results for the Hemophilus Influenzafimbrial protein (Pilin). A single region was identified by both the107×178×4 and the ALLMOTI5 motifs. The region located at amino acidresidues 102-129 was identified by the 107×178×4 motif. The regionlocated at amino acid residues 102-148 were identified by the ALLMOTI5search motif. No coiled-coil regions were predicted by the Lupasprogram.

FIG. 40 depicts the search motif results for the Staphylococcus aureustoxic shock syndrome Hemophilus Influenza fimbrial protein (Pilin). Asingle region was identified by both the 107×178×4 and the ALLMOTI5motifs. The region located at amino acid residues 102-129 was identifiedby the 107×178×4 motif. The region located at amino acid residues102-148 were identified by the ALLMOTI5 search motif. No coiled-coilregions were predicted by the Lupas program.

FIG. 41 summarizes the motif search results conducted on theStaphylococcus aureus enterotoxin Type E protein. These resultsdemonstrate the successful identification of DP178/DP107 analogscorresponding to peptide sequences within this protein, as describedbelow.

The ALLMOTI5 motif identified a region at amino acid residues 22-27. The107×178×4 motif identified two regions, with the first at amino acidresidues 26-69 and the second at 88-115. A P12LZIPC motif searchidentified two regions, at amino acid residues 163-181 and 230-250.

The Lupas program predicted a region with a high propensity for coilingat amino acid residues 25-54. This sequence is completely containedwithin the first region identified by both ALLMOTI5 and 107×178×4motifs.

FIG. 42 depicts the search motif results conducted on a secondStaphylococcus aureus toxin, enterotoxin A. Two regions were identifiedby the ALLMOTI5 motif, at amino acid residues 22-70 and amino acidresidues 164-205. The 107×178×4 motif found two regions, the first atamino acid residues 26-69 and the second at amino acid residues 165-192.A P23LZIPC motif search revealed a region at amino acid residues216-250. No coiled-coil regions were predicted by the Lupas program.

FIG. 43 shows the motif search results conducted on the E. coli heatlabile enterotoxin A protein, demonstrating that identification ofDP178/DP107 analogs corresponding to peptides located within thisprotein. Two regions were identified by the ALLMOTI5 motif, with thefirst residing at amino acid residues 55-115, and the second residing atamino acid residues 216-254. The 107×178×4 motif identified a singleregion at amino acid residues 78-105. No coiled-coil regions werepredicted by the Lupas program.

25. EXAMPLE Computer-Assisted Identification of DP178/DP107 AnalogsWithin Various Human Proteins

The results presented herein demonstrate the identification ofDP178/DP107 analogs corresponding to peptide sequences present withinseveral different human proteins.

FIG. 44 illustrates the search motif results conducted on the humanc-fos oncoprotein. The ALLMOTI5 motif identified a single region atamino acid residues 155-193. The 107×178×4 motif identified one regionat amino acid residues 162-193. The Lupas program predicted a region atamino acid residues 148-201 to have coiled-coil structure.

FIG. 45 illustrates the search motif results conducted on the humanlupus KU autoantigen protein P70. The ALLMOTI5 motif identified a singleregion at amino acid residues 229-280. The 107×178×4 motif identifiedone region at amino acid residues 235-292. The Lupas program predicted aregion at amino acid residues 232-267 to have coiled-coil structure.

FIG. 46 illustrates the search motif results conducted on the human zincfinger protein 10. The ALLMOTI5 motif identified a single region atamino acid residues 29-81. The 107×178×4 motif identified one region atamino acid residues 29-56. A P23LZIPC motif search found a single regionat amino acid residues 420-457. The Lupas program predicted nocoiled-coil regions.

26. EXAMPLE Potential Measles Virus DP178/DP107 Analogs: CD andAntiviral Characterization

In the Example presented herein, measles (MeV) virus DP178-like peptidesidentified by utilizing the computer-assisted search motifs described inthe Examples presented in Sections 9 and 21, above, are tested foranti-MeV activity. Additionally, circular dichroism (CD) structuralanalyses are conducted on the peptides, as discussed below. It isdemonstrated that several of the identified peptides exhibit potentantiviral capability. Additionally, it is shown that none of the thesepeptides exhibit a substantial helical character.

26.1. Materials and Methods

Structural analyses: The CD spectra were measured in a 10 mM sodiumphosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mMconcentrations, using a 1 cm pathlength cell on a Jobin/YvonAutodichrograph Mark V CD spectrophotometer. Peptide concentrations weredetermined from A280 using Edlehoch's method (1967, Biochemistry6:1948).

Anti-MeV antiviral activity syncytial reduction assay: The assayutilized herein tested the ability of the peptides to disrupt theability of Vero cells acutely infected with MeV (i.e., cells which areinfected with a multiplicity of infection of 2-3) to fuse and causesyncytial formation on a monolayer of an uninfected line of Vero cells.The more potent the peptide, the lower the observed level of fusion, thegreater the antiviral activity of the peptide.

Uninfected confluent monolayers of Vero cells were grown in microtiterwells in 10% FBS EMEM (Eagle Minimum Essential Medium w/o L-glutamine[Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS; whichhad been heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat.No. 14-501F) supplemented at 10%, antibiotics/antimycotics (BioWhittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare acutely infected Vero cells for addition to the uninfectedcells, cultures of acutely infected Vero cells were washed twice withHBSS (Bio Whittaker Cat. No. 10-543F) and cell monolayers were removedwith trypsin (Bio Whittaker Cat. No. 17-161E). Once cells detached,media was added, any remaining clumps of cells were dispersed, andhemacytometer cell counts were performed.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected Vero cells, then adding peptides (at thedilutions described below) in 10% FBS EMEM, and 50-100 acutelyMeV-infected Vero cells per well. Wells were then incubated at 37° C.for a maximum of 18 hours.

On day 2, after cells in control wells were checked for fusion centers,media was removed from the wells, followed by addition, to each well, ofapproximately 50 μl 0.25% Crystal Violet stain in methanol. Wells wererinsed twice with water immediately, to remove excess stain and werethen allowed to dry. The number of syncytia per well were then counted,using a dissecting microscope.

Anti-MeV antiviral activity plaque reduction assay: The assay utilizedherein tested the ability of the peptides to disrupt the ability of MeVto infect permissive, uninfected Vero cells, leading to the infectedcells' fusing with uninfected cells to produce syncytia. The lower theobserved level of syncytial formation, the greater the antiviralactivity of the peptide.

Monolayers of uninfected Vero cells are grown as described above.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected Vero cells, then adding peptides (at thedilutions described below) in 10% FBS EMEM, and MeV stock virus at afinal concentration of 30 plaque forming units (PFU) per well. Wellswere then incubated at 37° C. for a minimum of 36 hours and a maximum of48 hours.

On day 2, after cells in control wells were checked for fusion centers,media was removed from the wells, followed by addition, to each well, ofapproximately 50 μl 0.25% Crystal Violet stain in methanol. Wells wererinsed twice with water immediately, to remove excess stain and werethen allowed to dry. The number of syncytia per well were then counted,using a dissecting microscope.

Peptides: The peptides characterized in the study presented herein werepeptides T-252A0 to T-256A0, T-257B1/C1, and T-258B1 to T-265B0, andT-266A0 to T-268A0, as shown in FIGS. 47A-B. These peptides represent awalk through the DP178-like region of the MeV fusion protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100μg/ml to approximately 100 ng/ml. For each of the assays, a wellcontaining no peptide was also used.

26.2. Results

The data summarized in FIGS. 47A-B represents antiviral and structuralinformation obtained via “peptide walks” through the DP178-like regionof the MeV fusion protein.

As shown in FIGS. 47A-B, the MeV DP178-like peptides exhibited a rangeof antiviral activity as crude peptides. Several of these peptides werechosen for purification and further antiviral characterization. The IC₅₀values for such peptides were determined, as shown in FIGS. 47A-B, andranged from 1.35 μg/ml (T-257B1/C1) to 0.072 μg/ml (T-265B1). None ofthe DP178-like peptides showed, by CD analysis, a detectable level ofhelicity.

Thus, the computer assisted searches described, hereinabove, as in forexample, the Example presented in Section 9, for example, successfullyidentified viral peptide domains that represent highly promisinganti-MeV antiviral compounds.

27. EXAMPLE Potential SIV DP178/DP107 Analogs: AntiviralCharacterization

In the Example presented herein, simian immunodeficiency virus (SIV)DP178-like peptides identified by utilizing the computer-assisted searchmotifs described in the Examples presented in Sections 9, 12 and 19,above, were tested for anti-SIV activity. It is demonstrated thatseveral of the identified peptides exhibit potent antiviral capability.

27.1. Materials and Methods

Anti-SIV antiviral assays: The assay utilized herein were as reported inLangolis et al. (Langolis, A. J. et al., 1991, AIDS Research and HumanRetroviruses 7:713-720).

Peptides: The peptides characterized in the study presented herein werepeptides T-391 to T-400, as shown in FIGS. 48A-B. These peptidesrepresent a walk through the DP178-like region of the SUV TM protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100μg/ml to approximately 100 ng/ml. For each of the assays, a wellcontaining no peptide was also used.

27.2. RESULTS

The data summarized in FIGS. 48A-B represents antiviral informationobtained via “peptide walks” through the DP178-like region of the SIV TMprotein.

As shown in FIGS. 48A-B, peptides T-391 to T-400 were tested andexhibited a potent antiviral activity as crude peptides.

Thus, the computer assisted searches described, hereinabove, as in forexample, the Example presented in Section 9, for example, successfullyidentified viral peptide domains that represent highly promisinganti-SIV antiviral compounds.

28. EXAMPLE Anti-Viral Activity of DP107 and DP-178 Peptide Truncationsand Mutations

The Example presented in this Section represents a study of theantiviral activity of DP107 and DP178 truncations and mutations. It isdemonstrated that several of these DP107 and DP178 modified peptidesexhibit substantial antiviral activity.

28.1. Materials and Methods

Anti-HIV assays: The antiviral assays performed were as those described,above, in Section 6.1. Assays utilized HIV-1/IIIb and/or HIV-2 NIHZisolates. Purified peptides were used, unless otherwise noted in FIGS.49A-L.

Peptides: The peptides characterized in the study presented herein were:

-   -   1) FIGS. 49A-L present peptides derived from the region around        and containing the DP178 region of the HIV-1 BRU isolate.        Specifically, this region spanned from gp41 amino acid residue        615 to amino acid residue 717. The peptides listed contain        truncations of this region and/or mutations which vary from the        DP178 sequence amino acid sequence. Further, certain of the        peptides have had amino- and/or carboxy-terminal groups either        added or removed, as indicated in the figures; and    -   2) FIGS. 50A-B. presents peptides which represent truncations of        DP107 and/or the gp41 region surrounding the DP107 amino acid        sequence of HIV-1 BRU isolate. Certain of the peptides are        unblocked or biotinylated, as indicated in the figure.

Blocked peptides contained an acyl N-terminus and an amido C-terminus.

28.2. Results

Anti-HIV antiviral data was obtained with the group 1 DP178-derivedpeptides listed in FIGS. 49A-L. The full-length, non-mutant DP178peptide (referred to in FIGS. 49A-L as T20) results shown are for 4ng/ml.

In FIGS. 49A-D, a number of the DP178 truncations exhibited a high levelof antiviral activity, as evidenced by their low IC₅₀ values. Theseinclude, for example, test peptides T-50, T-624, T-636 to T-641, T-645to T-650, T-652 to T-654 and T-656. T-50 represents a test peptide whichcontains a point mutation, as indicated by the residue's shadedbackground. The HIV-1-derived test peptides exhibited a distinctstrain-specific antiviral activity, in that none of the peptides testedon the HIV-2 NIHZ isolate demonstrated appreciable antti-HIV-2 antiviralactivity.

Among the peptides listed in FIGS. 49E-H, are test peptides representingthe amino (T-4) and carboxy (T-3) terminal halves of DP178 were tested.The amino terminal peptide was not active (IC₅₀>400 μg/ml) whereas thecarboxy terminal peptide showed potent antiviral activity (IC₅₀=3μg/ml). A number of additional test peptides also exhibited a high levelof antiviral activity. These included, for example, T-61/T-102, T-217 toT-221, T-235, T-381, T-677, T-377, T-590, T-378, T-591, T-271 to T-272,T-611, T-222 to T-223 and T-60/T-224. Certain of the antiviral peptidescontain point mutations and/or amino acid residue additions which varyfrom the DP178 amino acid sequence.

In FIGS. 49I-L, point mutations and/or amino and/or carboxy-terminalmodifications are introduced into the DP178 amino acid sequence itself.As shown in the figure, the majority of the test peptides listed exhibitpotent antiviral activity.

Truncations of the DP107 peptide (referred to in IG. 50 as T21) werealso produced and tested, as shown in FIGS. 50A-B. FIGS. 50A-B alsopresents data concerning blocked and unblocked peptides which containadditional amino acid residues from the gp41 region in which the DP107sequence resides. Most of these peptides showed antiviral activity, asevidenced by their low IC₅₀ values.

Thus, the results presented in this Section demonstrate that not only dothe full length DP107 and DP178 peptides exhibit potent antiviralactivity, but truncations and/or mutant versions of these peptides canalso possess substantial antiviral character.

29. EXAMPLE Potential Epstein-Barr DP178/DP107 Analogs: AntiviralCharacterization

In the Example presented herein, peptides derived from the Epstein-Barr(EBV) DP-178/DP107 analog region of the Zebra protein identified, above,in the Example presented in Section 20 are described and tested foranti-EBV activity. It is demonstrated that among these peptides are oneswhich exhibit potential anti-viral activity.

29.1. Materials and Methods

Electrophoretic Mobility Shift Assays (EMSA): Briefly, an EBV Zebraprotein was synthesized utilizing SP6 RNA polymerase in vitrotranscription and wheat germ in vitro translation systems (PromegaCorporation recommendations; Butler, E. T. and Chamberlain, M. J., 1984,J. Biol. Chem. 257:5772; Pelham, H. R. B. and Jackson, R. J., 1976, Eur.J. Biochem. 67:247). The in vitro translated Zebra protein was thenpreincubated with increasing amounts of peptide up to 250 ng/ml prior tothe addition of 10,000 to 20,000 c.p.m. of a ³²P-labeled Zebra responseelement DNA fragment. After a 20 minute incubation in the presence ofthe response element, the reaction was analyzed on a 4% non-denaturingpolyacrylamide gel, followed by autoradiography, utilizing standardgel-shift procedures. The ability of a test peptide to prevent Zebrahomodimer DNA binding was assayed by the peptide's ability to abolishthe response element gel migration retardation characteristic of aprotein-bound nucleic acid molecule.

Peptides: The peptides characterized in this study represent peptidewalks through the region containing, and flanked on both sides by, theDP178/DP107 analog region identified in the Example presented in Section20, above, and shown as shown in FIG. 33. Specifically, the peptidewalks covered the region from amino acid residue 173 to amino acidresidue 246 of the EBV Zebra protein.

Each of the tested peptides were analyzed at a range of concentrations,with 150 ng/ml being the lowest concentration at which any of thepeptides exerted an inhibitory effect.

29.2. Results

The EBV Zebra protein transcription factor contains a DP178/DP107 analogregion, as demonstrated in the Example presented, above, in Section 20.This protein appears to be the primary factor responsible for thereactivation capability of the virus. A method by which the DNA-bindingfunction of the Zebra virus may be abolished may, therefore, representan effective antiviral technique. In order to identify potentialanti-EBV DP178/DP107 peptides, therefore, peptides derived from theregion identified in Section 20, above, were tested for their ability toinhibit Zebra protein DNA binding.

The test peptides' ability to inhibit Zebra protein DNA binding wasassayed via the EMSA assays described, above, in Section 28.1. The datasummarized in FIGS. 51A-D presents the results of EMSA assays of thelisted EBV test peptides. These peptides represent one amino acid“walks” through the region containing, and flanked on both sides by, theDP178/DP107 analog region identified in the Example presented in Section20, above, and shown as shown in FIG. 33. As shown in FIGS. 51A-C, theregion from which these peptides are derived lies from EBV Zebra proteinamino acid residue 173 to 246. A number of the test peptides which wereassayed exhibited an ability to inhibit Zebra protein homodimer DNAbinding, including 439, 441, 444 and 445.

Those peptides which exhibit an ability to inhibit Zebra protein DNAbinding represent potential anti-EBV antiviral compounds whose abilityto inhibit EBV infection can be further characterized.

The present invention is not to be limited in scope by the specificembodiments described which are intended as single illustrations ofindividual aspects of the invention, and functionally equivalent methodsand components are within the scope of the invention. Indeed, variousmodifications of the invention, in addition to those shown and describedherein will become apparent to those skilled in the art from theforegoing description and accompanying drawings. Such modifications areintended to fall within the scope of the appended claims.

1. An isolated nucleic acid molecule encoding a peptide consisting of the amino acid sequence of DP-178 (SEQ ID NO:1).
 2. An isolated nucleic acid molecule encoding a peptide consisting of the amino acid sequence of X-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z (SEQ ID NO:1), wherein the peptide amino acid residues are presented by the single-letter code, further wherein: X comprises an amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or a macromolecule carrier group; and Z comprises a carboxyl group, an amido group, a hydrophobic group, or a macromolecular carrier group.
 3. The nucleic acid of claim 2, wherein X is a hydrophobic group.
 4. The nucleic acid of claim 3, wherein the hydrophobic group X is carbobenzoxyl, dansyl, or t-butyloxycarbonyl.
 5. The nucleic acid of claim 2, wherein Z is a hydrophobic group.
 6. The nucleic acid of claim 5, wherein the hydrophobic group Z is t-butyloxycarbonyl.
 7. The nucleic acid of claim 2, wherein X is a macromolecular carrier group.
 8. The nucleic acid of claim 7, wherein the macromolecular carrier group is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 9. The nucleic acid of claim 2, wherein Z is a macromolecular carrier group.
 10. The nucleic acid of claim 9, wherein the macromolecular carrier group Z is a lipid-fatty acid conjugate, a polyethylene glycol, or a carbohydrate moiety.
 11. The nucleic acid of claim 2, wherein at least one bond linking adjacent amino acid residues is a non-peptide bond.
 12. The nucleic acid of claim 11, wherein the non-peptide bond is an imino, ester, hydrazine, semicarbazide, or azo bond.
 13. The nucleic acid of claim 2, wherein at least one amino acid residue is in a D-isomer configuration.
 14. The nucleic acid of claim 2, wherein the peptide comprises between one and three amino acid substitutions of a first amino acid residue for a second, different amino acid residue.
 15. A recombinant vector comprising the nucleic acid molecule of claim
 1. 16. A recombinant vector comprising a nucleic acid molecule encoding a fusion protein comprising DP-178 (SEQ ID NO:1). 